Cla97C01G015810 (gene) Watermelon (97103) v2

NameCla97C01G015810
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionPrecursor of CEP3
LocationCla97Chr01 : 29597730 .. 29598044 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCAACCAAGCTAAGCTTTGCCTTTCTTTTCATTTCCCTTTTAATTTTGTGTCATCTTATAGATTCTGCCTTCAGCAGGCCATTGAAAACCCACACAAATCACCAACTCTCTGAGACCCCTCCAAACCACCCTCATTTCCAATTCCATGCCGAAAATCTTGACGAAGGAAAAGGGTCAAACGGCGCCGTTTCTACTCCGAACCCTCCCACAGCAGCTGCAGGTAATTCGTCACCCGGCCGGAAGATGGATGACTTCAGGCCAACCACCCCCGGCCATAGCCCTGGCGTTGGCCATTCCATTGAGAACTAA

mRNA sequence

ATGGCACCAACCAAGCTAAGCTTTGCCTTTCTTTTCATTTCCCTTTTAATTTTGTGTCATCTTATAGATTCTGCCTTCAGCAGGCCATTGAAAACCCACACAAATCACCAACTCTCTGAGACCCCTCCAAACCACCCTCATTTCCAATTCCATGCCGAAAATCTTGACGAAGGAAAAGGGTCAAACGGCGCCGTTTCTACTCCGAACCCTCCCACAGCAGCTGCAGGTAATTCGTCACCCGGCCGGAAGATGGATGACTTCAGGCCAACCACCCCCGGCCATAGCCCTGGCGTTGGCCATTCCATTGAGAACTAA

Coding sequence (CDS)

ATGGCACCAACCAAGCTAAGCTTTGCCTTTCTTTTCATTTCCCTTTTAATTTTGTGTCATCTTATAGATTCTGCCTTCAGCAGGCCATTGAAAACCCACACAAATCACCAACTCTCTGAGACCCCTCCAAACCACCCTCATTTCCAATTCCATGCCGAAAATCTTGACGAAGGAAAAGGGTCAAACGGCGCCGTTTCTACTCCGAACCCTCCCACAGCAGCTGCAGGTAATTCGTCACCCGGCCGGAAGATGGATGACTTCAGGCCAACCACCCCCGGCCATAGCCCTGGCGTTGGCCATTCCATTGAGAACTAA

Protein sequence

MAPTKLSFAFLFISLLILCHLIDSAFSRPLKTHTNHQLSETPPNHPHFQFHAENLDEGKGSNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN
BLAST of Cla97C01G015810 vs. NCBI nr
Match: KGN48516.1 (hypothetical protein Csa_6G490800 [Cucumis sativus])

HSP 1 Score: 157.5 bits (397), Expect = 2.4e-35
Identity = 84/107 (78.50%), Postives = 91/107 (85.05%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLKTHTNH-QLSETPPNHPHFQFHAENLDEGK 60
           MAPTKLSFAFLFISLLILCHL+D AFSRPL THT H QLS+T P +PHFQ H + L EGK
Sbjct: 5   MAPTKLSFAFLFISLLILCHLVDPAFSRPLTTHTIHQQLSDTLPKNPHFQLHGQTLHEGK 64

Query: 61  GSN-GAVSTPNP-PTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN 105
            SN  AVSTPNP P +AA +S+PGRKMDDFRPTTPGHSPGVGHSIEN
Sbjct: 65  ASNDDAVSTPNPNPPSAAASSTPGRKMDDFRPTTPGHSPGVGHSIEN 111

BLAST of Cla97C01G015810 vs. NCBI nr
Match: PNX96951.1 (hypothetical protein L195_g020169 [Trifolium pratense])

HSP 1 Score: 61.2 bits (147), Expect = 2.4e-06
Identity = 42/121 (34.71%), Postives = 64/121 (52.89%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLKTHTNHQLSETPPNHPHFQFHAENLDEGKG 60
           MA  K  F+ +F++L++L    +S   R LK   +++++++P  H +   + +N+  G  
Sbjct: 1   MAQNKSIFSLIFVALIVLSQTFESIEGRYLK---SNEVNQSPMKHNN--ANNDNVVHGSI 60

Query: 61  S-----------------NGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIE 105
           S                 NGA   P+PP       +PGR + DFRPTTPGHSPG+GHSI 
Sbjct: 61  SISNAEKLTSMSPPSVVVNGATGEPSPP------PTPGRGVSDFRPTTPGHSPGIGHSIH 110

BLAST of Cla97C01G015810 vs. NCBI nr
Match: XP_025980294.1 (precursor of CEP3-like [Glycine max] >KHN42070.1 hypothetical protein glysoja_003810 [Glycine soja] >KRH28484.1 hypothetical protein GLYMA_11G057100 [Glycine max])

HSP 1 Score: 59.3 bits (142), Expect = 8.9e-06
Identity = 39/104 (37.50%), Postives = 53/104 (50.96%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLKTHTNHQLSETPPNHPHFQFHAENLDEGKG 60
           MA  K   + + ++L+I C    S   R LK+       ET  +  H      N+ +   
Sbjct: 1   MAQNKFLLSLVLLALIIFCQGFHSIEGRYLKS------GETIKHQMHSGISTTNVAD--- 60

Query: 61  SNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN 105
               VS P PP+AA     PGR +D+FRPT PGHSPGVGH++ N
Sbjct: 61  ----VSPPTPPSAAV----PGRDVDNFRPTAPGHSPGVGHTVHN 87

BLAST of Cla97C01G015810 vs. NCBI nr
Match: XP_014519601.1 (precursor of CEP3 [Vigna radiata var. radiata])

HSP 1 Score: 59.3 bits (142), Expect = 8.9e-06
Identity = 43/104 (41.35%), Postives = 53/104 (50.96%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLKTHTNHQLSETPPNHPHFQFHAENLDEGKG 60
           MA  K     +F++L+IL     S   R LK       SE   +H   Q      +    
Sbjct: 1   MAQNKFKMTLIFMALIILWQGFQSIEGRHLK-------SEETIHHRQMQERIWKTNVAPF 60

Query: 61  SNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN 105
             G VS P PP+AAA    PGR +D+FRPT PGHSPGVGHS+ N
Sbjct: 61  DVG-VSPPAPPSAAA----PGRDVDNFRPTAPGHSPGVGHSVHN 92

BLAST of Cla97C01G015810 vs. NCBI nr
Match: XP_007155941.1 (hypothetical protein PHAVU_003G245400g [Phaseolus vulgaris] >ESW27935.1 hypothetical protein PHAVU_003G245400g [Phaseolus vulgaris])

HSP 1 Score: 57.4 bits (137), Expect = 3.4e-05
Identity = 44/103 (42.72%), Postives = 51/103 (49.51%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLKTHTNHQLSETPPNHPHFQFHAENLDEGKG 60
           MA  K  F  +F SL+I C    S   R LK H N   S+      H    A N    K 
Sbjct: 1   MARNKFIFTMIFFSLIIFCQRFHSTEGRHLK-HNNQVHSDV-----HGGISATNAATLK- 60

Query: 61  SNGAVSTPNPPTAAA-GNSSPGRKMDDFRPTTPGHSPGVGHSI 103
            N A  TP+    A      PGR ++DFRPTTPGHSPGVGHS+
Sbjct: 61  -NVAPLTPSTMVGATLAAPPPGRGVEDFRPTTPGHSPGVGHSV 95

BLAST of Cla97C01G015810 vs. TrEMBL
Match: tr|A0A0A0KLC0|A0A0A0KLC0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490800 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-35
Identity = 84/107 (78.50%), Postives = 91/107 (85.05%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLKTHTNH-QLSETPPNHPHFQFHAENLDEGK 60
           MAPTKLSFAFLFISLLILCHL+D AFSRPL THT H QLS+T P +PHFQ H + L EGK
Sbjct: 5   MAPTKLSFAFLFISLLILCHLVDPAFSRPLTTHTIHQQLSDTLPKNPHFQLHGQTLHEGK 64

Query: 61  GSN-GAVSTPNP-PTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN 105
            SN  AVSTPNP P +AA +S+PGRKMDDFRPTTPGHSPGVGHSIEN
Sbjct: 65  ASNDDAVSTPNPNPPSAAASSTPGRKMDDFRPTTPGHSPGVGHSIEN 111

BLAST of Cla97C01G015810 vs. TrEMBL
Match: tr|A0A2K3N1M2|A0A2K3N1M2_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g020169 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-06
Identity = 42/121 (34.71%), Postives = 64/121 (52.89%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLKTHTNHQLSETPPNHPHFQFHAENLDEGKG 60
           MA  K  F+ +F++L++L    +S   R LK   +++++++P  H +   + +N+  G  
Sbjct: 1   MAQNKSIFSLIFVALIVLSQTFESIEGRYLK---SNEVNQSPMKHNN--ANNDNVVHGSI 60

Query: 61  S-----------------NGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIE 105
           S                 NGA   P+PP       +PGR + DFRPTTPGHSPG+GHSI 
Sbjct: 61  SISNAEKLTSMSPPSVVVNGATGEPSPP------PTPGRGVSDFRPTTPGHSPGIGHSIH 110

BLAST of Cla97C01G015810 vs. TrEMBL
Match: tr|I1LHF6|I1LHF6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_11G057100 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.9e-06
Identity = 39/104 (37.50%), Postives = 53/104 (50.96%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLKTHTNHQLSETPPNHPHFQFHAENLDEGKG 60
           MA  K   + + ++L+I C    S   R LK+       ET  +  H      N+ +   
Sbjct: 1   MAQNKFLLSLVLLALIIFCQGFHSIEGRYLKS------GETIKHQMHSGISTTNVAD--- 60

Query: 61  SNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN 105
               VS P PP+AA     PGR +D+FRPT PGHSPGVGH++ N
Sbjct: 61  ----VSPPTPPSAAV----PGRDVDNFRPTAPGHSPGVGHTVHN 87

BLAST of Cla97C01G015810 vs. TrEMBL
Match: tr|A0A1S3VMK4|A0A1S3VMK4_VIGRR (uncharacterized protein LOC106776634 OS=Vigna radiata var. radiata OX=3916 GN=LOC106776634 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.9e-06
Identity = 43/104 (41.35%), Postives = 53/104 (50.96%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLKTHTNHQLSETPPNHPHFQFHAENLDEGKG 60
           MA  K     +F++L+IL     S   R LK       SE   +H   Q      +    
Sbjct: 1   MAQNKFKMTLIFMALIILWQGFQSIEGRHLK-------SEETIHHRQMQERIWKTNVAPF 60

Query: 61  SNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN 105
             G VS P PP+AAA    PGR +D+FRPT PGHSPGVGHS+ N
Sbjct: 61  DVG-VSPPAPPSAAA----PGRDVDNFRPTAPGHSPGVGHSVHN 92

BLAST of Cla97C01G015810 vs. TrEMBL
Match: tr|A0A2N9HI50|A0A2N9HI50_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39764 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-05
Identity = 44/114 (38.60%), Postives = 57/114 (50.00%), Query Frame = 0

Query: 1   MAPTKLSFAFLFISLLILCHLIDSAFSRPLKTHTNHQLSETPPNHPHFQFHAENLDEGKG 60
           MA +K   AF F+  +IL   I S   R L+   N+  S+T        +  E +  G  
Sbjct: 1   MAQSKSISAF-FLLFVILSQQIHSIEGRHLRVGKNNNKSQTLQTQTKI-YETETIKHGGE 60

Query: 61  SNG--------AVSTPNPPTAAAGNS--SPGRKMDDFRPTTPGHSPGVGHSIEN 105
            +G         VS P PP+     S   P R +DDFRPT+PGHSPGVGHSI+N
Sbjct: 61  LHGEDITNEATLVSPPTPPSLGVSQSPTXPSRSVDDFRPTSPGHSPGVGHSIQN 112

BLAST of Cla97C01G015810 vs. Swiss-Prot
Match: sp|O80460|PCEP3_ARATH (Precursor of CEP3 OS=Arabidopsis thaliana OX=3702 GN=CEP3 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.5e-04
Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 0

Query: 61  SNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN 105
           + G+V + +PPT     S P   +D FRPT PGHSPG+GHS+ N
Sbjct: 40  AGGSVLSSSPPTEPL-ESPPSHGVDTFRPTEPGHSPGIGHSVHN 82

BLAST of Cla97C01G015810 vs. TAIR10
Match: AT2G23440.1 (unknown protein)

HSP 1 Score: 47.0 bits (110), Expect = 8.3e-06
Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 0

Query: 61  SNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN 105
           + G+V + +PPT     S P   +D FRPT PGHSPG+GHS+ N
Sbjct: 40  AGGSVLSSSPPTEPL-ESPPSHGVDTFRPTEPGHSPGIGHSVHN 82

BLAST of Cla97C01G015810 vs. TAIR10
Match: AT5G66815.1 (unknown protein)

HSP 1 Score: 41.6 bits (96), Expect = 3.5e-04
Identity = 15/20 (75.00%), Postives = 19/20 (95.00%), Query Frame = 0

Query: 85  DDFRPTTPGHSPGVGHSIEN 105
           +DFRPTTPGHSPG+GHS+ +
Sbjct: 85  EDFRPTTPGHSPGIGHSLSH 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN48516.12.4e-3578.50hypothetical protein Csa_6G490800 [Cucumis sativus][more]
PNX96951.12.4e-0634.71hypothetical protein L195_g020169 [Trifolium pratense][more]
XP_025980294.18.9e-0637.50precursor of CEP3-like [Glycine max] >KHN42070.1 hypothetical protein glysoja_00... [more]
XP_014519601.18.9e-0641.35precursor of CEP3 [Vigna radiata var. radiata][more]
XP_007155941.13.4e-0542.72hypothetical protein PHAVU_003G245400g [Phaseolus vulgaris] >ESW27935.1 hypothet... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0KLC0|A0A0A0KLC0_CUCSA1.6e-3578.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490800 PE=4 SV=1[more]
tr|A0A2K3N1M2|A0A2K3N1M2_TRIPR1.6e-0634.71Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g020169 PE=4 SV=1[more]
tr|I1LHF6|I1LHF6_SOYBN5.9e-0637.50Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_11G057100 PE=4 SV=1[more]
tr|A0A1S3VMK4|A0A1S3VMK4_VIGRR5.9e-0641.35uncharacterized protein LOC106776634 OS=Vigna radiata var. radiata OX=3916 GN=LO... [more]
tr|A0A2N9HI50|A0A2N9HI50_FAGSY1.3e-0538.60Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39764 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
sp|O80460|PCEP3_ARATH1.5e-0450.00Precursor of CEP3 OS=Arabidopsis thaliana OX=3702 GN=CEP3 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
AT2G23440.18.3e-0650.00unknown protein[more]
AT5G66815.13.5e-0475.00unknown protein[more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0048364root development
Vocabulary: INTERPRO
TermDefinition
IPR033250CEP
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006995 cellular response to nitrogen starvation
biological_process GO:0006970 response to osmotic stress
biological_process GO:0032774 RNA biosynthetic process
biological_process GO:0060359 response to ammonium ion
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
biological_process GO:0048364 root development
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0007275 multicellular organism development
biological_process GO:0009651 response to salt stress
biological_process GO:0035864 response to potassium ion
biological_process GO:0009744 response to sucrose
biological_process GO:1901698 response to nitrogen compound
biological_process GO:0090548 response to nitrate starvation
biological_process GO:1902025 nitrate import
biological_process GO:2000023 regulation of lateral root development
biological_process GO:1901371 regulation of leaf morphogenesis
biological_process GO:0010469 regulation of receptor activity
biological_process GO:0007165 signal transduction
biological_process GO:2000280 regulation of root development
biological_process GO:0048831 regulation of shoot system development
biological_process GO:0009733 response to auxin
biological_process GO:0010037 response to carbon dioxide
biological_process GO:0009642 response to light intensity
cellular_component GO:0048046 apoplast
cellular_component GO:0005576 extracellular region
cellular_component GO:0005575 cellular_component
molecular_function GO:0005179 hormone activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008146 sulfotransferase activity
molecular_function GO:0003899 DNA-directed RNA polymerase activity
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G015810.1Cla97C01G015810.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..104
NoneNo IPR availablePANTHERPTHR33348:SF11SUBFAMILY NOT NAMEDcoord: 1..104
IPR033250C-terminally encoded peptidePANTHERPTHR33348FAMILY NOT NAMEDcoord: 1..104

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C01G015810Cucumber (Chinese Long) v3cucwmbB105
Cla97C01G015810Watermelon (97103) v2wmbwmbB007
Cla97C01G015810Watermelon (97103) v2wmbwmbB011
Cla97C01G015810Silver-seed gourdcarwmbB0185
Cla97C01G015810Silver-seed gourdcarwmbB0211
Cla97C01G015810Silver-seed gourdcarwmbB0803
Cla97C01G015810Cucumber (Gy14) v2cgybwmbB096
Cla97C01G015810Cucumber (Gy14) v2cgybwmbB252
Cla97C01G015810Cucumber (Gy14) v2cgybwmbB489
Cla97C01G015810Cucumber (Gy14) v1cgywmbB392
Cla97C01G015810Cucumber (Gy14) v1cgywmbB634
Cla97C01G015810Cucurbita maxima (Rimu)cmawmbB013
Cla97C01G015810Cucurbita maxima (Rimu)cmawmbB091
Cla97C01G015810Cucurbita maxima (Rimu)cmawmbB521
Cla97C01G015810Cucurbita maxima (Rimu)cmawmbB670
Cla97C01G015810Cucurbita maxima (Rimu)cmawmbB800
Cla97C01G015810Cucurbita moschata (Rifu)cmowmbB078
Cla97C01G015810Cucurbita moschata (Rifu)cmowmbB502
Cla97C01G015810Cucurbita moschata (Rifu)cmowmbB642
Cla97C01G015810Wild cucumber (PI 183967)cpiwmbB271
Cla97C01G015810Wild cucumber (PI 183967)cpiwmbB540
Cla97C01G015810Cucumber (Chinese Long) v3cucwmbB535
Cla97C01G015810Cucumber (Chinese Long) v2cuwmbB516
Cla97C01G015810Bottle gourd (USVL1VR-Ls)lsiwmbB038
Cla97C01G015810Bottle gourd (USVL1VR-Ls)lsiwmbB257
Cla97C01G015810Melon (DHL92) v3.6.1medwmbB072
Cla97C01G015810Melon (DHL92) v3.6.1medwmbB450
Cla97C01G015810Melon (DHL92) v3.5.1mewmbB078
Cla97C01G015810Melon (DHL92) v3.5.1mewmbB456
Cla97C01G015810Watermelon (Charleston Gray)wcgwmbB129
Cla97C01G015810Watermelon (Charleston Gray)wcgwmbB132
Cla97C01G015810Watermelon (97103) v1wmwmbB306
Cla97C01G015810Watermelon (97103) v1wmwmbB308
Cla97C01G015810Wax gourdwgowmbB344