CsGy6G005290 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G005290
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionDNA mismatch repair protein
LocationChr6 : 4842858 .. 4848233 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAACGGAGAATTAACAAATTTTCTCTCTGAAGGTCGAAGCTAAGTTCCGCAGCTTGAGCTTCGTAAGTAGCTCCGAAACTTCAAAGCTGAAACCATCTTTGTTCTTTTGGAAAAGAATAATGGATTTATAATTATGTTAATATCATTATTTTTCTTGTTTGGATTTTTAGTTGAAATGAAGTTTCTAGACTGGTATGTGAAGATTGGGACAGTTTCGGCTTTGATTGGAGGTTCCATGGAATTGTTCATGATTAAATCGGGCTTCTGTGTGAGAACCATCCTTTTTTCTCTCTCTTCCTCAGTCCACCATTGTTAATTCATTTTCTTTCCTGTATTTAATTGAAGTACCTTTGGTTTTGGCATTTCGTCTTAATTTATTTATTTATTATTATTATTATTTTTATCTTTCTTTCAATAAATTGTAGCAAATTGATTCTCTGCAAGAATTGGAGGTTTGTCAATAGTTATTTTTTAGGGTTTTGAGTGTTAATTAATTCTAAATTTATCTTCGTCCATTAGCTTTAGGTTTTTGGGTCAACTAGTGGATTGTATGTTAATAGCTGGTCCAGTGTTCACGTACGTTAGACGGTGTTTTGAGGTTGGGTTGGGTAGATTCTTAAAATTTTTTACAATTTATGTTCAAGTAGTTTGAAGAATTTTTGCTTCCAATAAATCAGAACGAACTTTTGATTTTGGTGTTGGATAGATATCAAGAAGTGAATAAGTTGAATTGAGTGCAAGTTGTTATGTTTTATGTTGAAAACGTTATTAAGGAACATTAAAGACCAACAATAAGCCTCCAACATAATTAGCCAAAATCGGGATGCAGAGTGACAATGTAAAAATAATGTAGATAAAGTAAACGACCTTGATATTCAGCACTATATTCACACCTGAAATGTTTTCTAAAGCTCAAGGCGAATGAACTTTTTTTGTTCTTCTTTGGAGGCTTTGGTTTGAAGAGTTATTTTTTGGGATTGTTCTACTTGGTCCATTTTTTTGAATTATAGCCTAAGTCGGTTCTACACCAGTTGGGTCTCTTTTTTGTAACCCAATGGAGTGAGTGGATATCCCATCTCCTCGTATTTTGTATTCTGTACTTTGTTAATGGAAATAAATTTTGTTTATTAACCCCAAAAAAGTTCAAGTACTGATTCAATTGCTCTTTTTTTTTTTTTTGGATACGAGATTCAAGTGCTCTATTTAAGTCCGTTTCTTTATTTGATGGTCTGTTGATTGGTATACGATTTTCACTCTATTTTGGCACAGATGATAAAGTAGCAGTTATAGAATCGGAGAGGCTGGCTTGGGAAAACTCGCCTGAGGCTCAGGCAATTAGAGAAGCCCTAAATCCTTGGAGGAACAGCGATGCTGCTACCGAGGCTGGGAAAGAAAACTAATGCTTCAACTGCTAAATTGGGTAGCTGAGTTTTGCAAGGTTCGTTCATCATTCCATCTTCATATAGAACTGATCATATAGAAAAAAGTATTTGGTGCCTATGTCCATGCTTTGACATAATTTTTTCTTCTCCCAAGATGGATGCCAAACATTATGTTTTAAATCGGCTGCTCAACAAAAACAGTAGAAATCAAGCAGCATACATTCTACCAACAAAAATCTATCCAAATTGTACTAATTAGTTTTTCACTTTATACTAGGGGTGCACGGAATTTTTTTTTTAACCAACCAAACTCACTTGTCGGTTTGGGTTGAAACCAGTCCATTTAATTGTTTTGGGTTGAAAATATATAAAGCTGAAAAATTTAGGTCGGGTTTGGTTTAGACCTTAAAAACAAATTGGTAAATCTAGCCTACCAATATATGCTATATATAATAAACGTCAATAGTTCGAACAAAAAATATTGCAGCTAGGTGTGCGTGTAGGTGCGCCTGCATGCTTGAAGTAGTGAGTTTGATATCAGGATAGCACAGGATTTTATTTTATTTATGGAGTTTTCCTCCTCCCCCTCGTGCCTGTTCCATTTCCCCTCTTTACGGCACCTTGTCTCCTACCTTTATGCCTACCTCTAGAGAATCAAGCCAGACCAAATTGCCATCTGAGTGGTTTGGGTGGCACAATTTCTCATTTGCCCGGTTGGATTCTGGTTTTGTATATATCCTTAACAAATTAATTGGTTTGGTTTTGAATTTCTAAGAAACCAATCCAAACCGAGCCACTTGCACCCCTACTTTATACCTTAGAAAACCAAACGTCGGCTAGCACTGCTTAGACAAGGGATTTTAGGTGCTCGGGTGATATTTCTTGGATTGCCTGTTATATACAGAAAAGTACAAAATTTTTTAAACAAAACTAACAGTGTAAGTCTTGTAGCAAGAAAATCAAAATATATGGGTCAAGGTTTGAGTTTAGGAATCGGAGGGACGTGTTAAAGTTCAGTGCAAATTTATTAGGAAAATAATTTGTGTTGATACTAAAACTCATGCCAACATTAGACTCATATTTTCAAGGAGAAATGACCCCAAAACCTTGCAAAACAAGCTACTATGGATTCGATGTAGTGTCAAGCCAATTACACTTTGATGCTTAAGGTAGAATCAAGTTTGTACCTTTCTTCAGCTGTAGCTTAACAATTATCTATGTTGACCATTTCGGAACTGAAACTTAAAAAACGTTTGTGCTTTCAAGTGACTATGGACCTTCTGATCAATGTTAACATTAAAGCCGTTACTCATCCAAGCCATCAATGTGCTGAGCTCTTGGATAACCCTCTAATGTCTTGTTCACAGTTATTAACGAACTACTACACAATTTACTATAATTATACCTCTTTAGTATAATATAGGCTTATTTAATAGTTTTGACTTATGAAAACGGGAATTGACATCTTATTAGCTTCAAAATTAATCATCTTGGATTCGTCACTCAACTATGTCTTAGTAGAATTAGCTAAAGACTCCAAATAATACCCTGGTGAGTTAACAAAAAAGCATGGTATGACCGAACCCCCAAACTTTAGAGCTCCAAGAGTATCGGATTTACAAATCGGCATCCCTCTATATAGAAAATATTGGGGTTGATGGTCAATGTCATAAGAGACAGTAATGAAAACAAGGAGAGTATTGAAAAATGAGGTCAAAACCCATAGACCTACACAAGGATATGATGACAGACGTATTCATAATTAAGAAGGTTTGATATCAATATCAAAATTAAAGATTAAGATTGATATCTCTAAAATCGTAGATAAGAGTTCCCATAAAACATAAAAGAGAAGTCATCTATTATCACAATATGAAGATATACAATACACTAAATAAGATCAATAACTTTATGTGGAAGTAAAGGCAGCTTAGTTATTAATTTGAATGATTTTTGTAGATATTTGATTTACAAAAATATCTTCGGTACCTATATTTTTTTTGATATATCCCTAATATCGTTGTCAAGATTTTAATCCTTTGACTCTCTTAAGATATCACAAATTGACAAGTTTTTTTTATAGCAAAATATTGTGAGGTTAAGTGGTTGCTTATAAGATGGGCATAGCAGTTTAGTGGCTCTAATCCATTTAAACACTCTAGGAAAAATATCAATTTATACTGAACTTTGGGTATCAATTTGAACCTTAAATTAATAATTGTTTCAAATTTAAACCCTAAACTAATAGCTGCATCAATTTAAAATTAAAACTTTCATAAATGCATCAATTTGAACGCTAACTCTTCATACATGTATCAATTTGAAGCCTCAACTTTTATAACTGTGTCAAATTAAAACATAATGGAGAGTTTAAATTGATGCATTTATATTGGTTCATGGTCTAAATTGATACGCCTATAAAAATTTAGAGTCTAAATTGATACAATTATTAGTTTGGAGTTTGTATCGTTCCCAAAGTTCAAGGTTTAAAGTGATACAATTATTAATTTAAAGTTTAAATTAACACAAATCCCAAAGTTTGAAGTGCATAAATTGAAAATTTCCCAACTTTCTAATTATGAAAAAGAGATAAATTCTCGTACTAGAAGATTAGTTTGGTTTAGAGACTCAAATACATTTATTTATTTTATTCTCTAAAGAACCATTGCAGGATTACATTTGAAACAAAAACTACCCGTTGAAGATTTCTTGTTGAATAAAATTTCTAGAGGAAAATAACTGTTAAACTGCCCATTATTTAATTATTTATTTTTTACTATATTGTAGTGTAGAATTTTAACCTTTGACCTCTAGAGATAGAAGTGTCAATACCATCGAGCTAAGTCGACCTTGGTTGATATTTGATGAAATTCAAACTTTTCCTTGAAAAATTCTATTTAGCCTCCAATGTTACATTGCTTTTAGCCTCCAATGTTACATTGCTTTTAGCCTCCAATGTTACATTGCTTTCTCTCAAGTCTAACATAGACCCCAAAGGAAGATTTTGACCAAATCTCTGTGCTAGTCTCCAAAATTTTATAACGAATGAACAATGACTAACTAATTGTGACAGACTGACAGTAGGATATTCTAACATACAAGCGAATACAAACAGACCTACAATAACTCAACAGTCGTTTTGTAAGACGGCAATCAACTCTGTTTGTTTGCATCGGTATGCAAGAATTCTCTTCTTACCAAAGCTTCGGGTCCAAAACTATTTAGCGGTTTCTTCTGATCGGTTTTGCAGGTAGAGAAAAACAATTACAAGGGAATCAGATTGAGAGATAATCAAGCACGTGATTTAAAGTTTCAAATAATAAGGGGTGGAATTTTAGAAAGCTGTTTCTTTATGACATTGGAGGTTTACTTTTGATTGTTTCCATATTGAAATTGAATGATATCACTAAGCTGAAGGTATGATAATTCAATTCATTACCAAACTCTCTCTGTTCCCATATAGTTTGAAACCATATTAGAGAATCATAATCCCATATTCAGGACTGTCATTATGCCTCTTGGACTATAGTCCTTTGGTTATTCTACTTTTGATTCAAAACCTACCAATGATTTTGACTATGTTGATGCAGTACACCATAGTTGAAAATATTTCTTAGGTGAAAGACAGAAAGAAGTTCGTGGTCTAACAATGCTTCTGAATCTTAATTTAGTCAACCTTTCACACTAATCCAAATCCATTTTTATTTTGGGTACTTTCAAACATTTTGTCTTCAATCTTGAATTTATTATGAAATCTCTCTTTTGGTCTTTGTAATGCATTTATTAACAGAAATCCTATGTGAATAATTGCTATATTATATTCAAAGTTCGTTTCAAGTGTAATAAAAATTTGGATTGCAAGGATTTGTATCAATTTTAGGGGATTTGAAAGAGAAGTAGGGTTTGAGTAATTAGTTCACCAAGAGGGAATTTAAAAGGTCAAAGTGTGTAATTTTGTCACCCAATTTGAAGCTTTGTTGATTCTAGAAGTTGG

mRNA sequence

GAACGGAGAATTAACAAATTTTCTCTCTGAAGGTCGAAGCTAAGTTCCGCAGCTTGAGCTTCTTGAAATGAAGTTTCTAGACTGGTATGTGAAGATTGGGACAGTTTCGGCTTTGATTGGAGGTTCCATGGAATTGTTCATGATTAAATCGGGCTTCTATGATAAAGTAGCAGTTATAGAATCGGAGAGGCTGGCTTGGGAAAACTCGCCTGAGGCTCAGGCAATTAGAGAAGCCCTAAATCCTTGGAGGAACAGCGATGCTGCTACCGAGGCTGGGAAAGAAAACTAATGCTTCAACTGCTAAATTGGGTAGCTGAGTTTTGCAAGGTAGAGAAAAACAATTACAAGGGAATCAGATTGAGAGATAATCAAGCACGTGATTTAAAGTTTCAAATAATAAGGGGTGGAATTTTAGAAAGCTGTTTCTTTATGACATTGGAGGTTTACTTTTGATTGTTTCCATATTGAAATTGAATGATATCACTAAGCTGAAGGTATGATAATTCAATTCATTACCAAACTCTCTCTGTTCCCATATAGTTTGAAACCATATTAGAGAATCATAATCCCATATTCAGGACTGTCATTATGCCTCTTGGACTATAGTCCTTTGGTTATTCTACTTTTGATTCAAAACCTACCAATGATTTTGACTATGTTGATGCAGTACACCATAGTTGAAAATATTTCTTAGGTGAAAGACAGAAAGAAGTTCGTGGTCTAACAATGCTTCTGAATCTTAATTTAGTCAACCTTTCACACTAATCCAAATCCATTTTTATTTTGGGTACTTTCAAACATTTTGTCTTCAATCTTGAATTTATTATGAAATCTCTCTTTTGGTCTTTGTAATGCATTTATTAACAGAAATCCTATGTGAATAATTGCTATATTATATTCAAAGTTCGTTTCAAGTGTAATAAAAATTTGGATTGCAAGGATTTGTATCAATTTTAGGGGATTTGAAAGAGAAGTAGGGTTTGAGTAATTAGTTCACCAAGAGGGAATTTAAAAGGTCAAAGTGTGTAATTTTGTCACCCAATTTGAAGCTTTGTTGATTCTAGAAGTTGG

Coding sequence (CDS)

ATGAAGTTTCTAGACTGGTATGTGAAGATTGGGACAGTTTCGGCTTTGATTGGAGGTTCCATGGAATTGTTCATGATTAAATCGGGCTTCTATGATAAAGTAGCAGTTATAGAATCGGAGAGGCTGGCTTGGGAAAACTCGCCTGAGGCTCAGGCAATTAGAGAAGCCCTAAATCCTTGGAGGAACAGCGATGCTGCTACCGAGGCTGGGAAAGAAAACTAA

Protein sequence

MKFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPWRNSDAATEAGKEN
Homology
[Close]
BLAST of CsGy6G005290 vs. NCBI nr
Match: KGN46185.1 (hypothetical protein Csa_6G067430 [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-32
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MKFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPW 60
          MKFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPW
Sbjct: 1  MKFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPW 60

Query: 61 RNSDAATEAGKEN 74
          RNSDAATEAGKEN
Sbjct: 61 RNSDAATEAGKEN 73

[Close]
BLAST of CsGy6G005290 vs. NCBI nr
Match: XP_022138621.1 (uncharacterized protein LOC111009736 [Momordica charantia])

HSP 1 Score: 125.9 bits (315), Expect = 5.5e-26
Identity = 59/72 (81.94%), Postives = 65/72 (90.28%), Query Frame = 0 

Query: 1   MKFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPW 60
           MKFLDWYVKIG VSALIG SME+FMIK+GFYDKV V+ESE+LAWENSPEAQA+REALNPW
Sbjct: 81  MKFLDWYVKIGAVSALIGASMEMFMIKTGFYDKVTVLESEKLAWENSPEAQAVREALNPW 140

Query: 61  RNSDAATEAGKE 73
           RN DA  EA K+
Sbjct: 141 RNRDAVAEAKKD 152

[Close]
BLAST of CsGy6G005290 vs. NCBI nr
Match: XP_022959449.1 (uncharacterized protein LOC111460420 [Cucurbita moschata] >XP_022959450.1 uncharacterized protein LOC111460420 [Cucurbita moschata])

HSP 1 Score: 125.9 bits (315), Expect = 5.5e-26
Identity = 60/72 (83.33%), Postives = 66/72 (91.67%), Query Frame = 0 

Query: 1  MKFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPW 60
          MKFL WYVKIGTVSALIG SME+FMIK+GFYDKV V+ESE++AWENSPEAQAIREALNPW
Sbjct: 1  MKFLGWYVKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKIAWENSPEAQAIREALNPW 60

Query: 61 RNSDAATEAGKE 73
          RN DAA EA K+
Sbjct: 61 RNHDAAEEARKD 72

[Close]
BLAST of CsGy6G005290 vs. NCBI nr
Match: XP_023006006.1 (uncharacterized protein LOC111498883 [Cucurbita maxima])

HSP 1 Score: 125.9 bits (315), Expect = 5.5e-26
Identity = 60/72 (83.33%), Postives = 66/72 (91.67%), Query Frame = 0 

Query: 1  MKFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPW 60
          MKFL WYVKIGTVSALIG SME+FMIK+GFYDKV V+ESE++AWENSPEAQAIREALNPW
Sbjct: 11 MKFLGWYVKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKIAWENSPEAQAIREALNPW 70

Query: 61 RNSDAATEAGKE 73
          RN DAA EA K+
Sbjct: 71 RNHDAAEEARKD 82

[Close]
BLAST of CsGy6G005290 vs. NCBI nr
Match: XP_023548311.1 (uncharacterized protein LOC111806987 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 125.9 bits (315), Expect = 5.5e-26
Identity = 60/72 (83.33%), Postives = 66/72 (91.67%), Query Frame = 0 

Query: 1  MKFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPW 60
          MKFL WYVKIGTVSALIG SME+FMIK+GFYDKV V+ESE++AWENSPEAQAIREALNPW
Sbjct: 6  MKFLGWYVKIGTVSALIGASMEMFMIKTGFYDKVTVLESEKIAWENSPEAQAIREALNPW 65

Query: 61 RNSDAATEAGKE 73
          RN DAA EA K+
Sbjct: 66 RNHDAAEEARKD 77

[Close]
BLAST of CsGy6G005290 vs. TAIR10
Match: AT3G62450.1 (unknown protein)

HSP 1 Score: 106.7 bits (265), Expect = 6.2e-24
Identity = 51/66 (77.27%), Postives = 56/66 (84.85%), Query Frame = 0 

Query: 2  KFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPWR 61
          +FLDWY+KI   SA+IGG ME FMIK+GFYDKV VIE+ER A ENSPEAQAIREALNPWR
Sbjct: 5  RFLDWYLKIAIGSAIIGGGMEFFMIKTGFYDKVTVIEAERRALENSPEAQAIREALNPWR 64

Query: 62 NSDAAT 68
          N DA T
Sbjct: 65 NKDAET 70

[Close]
BLAST of CsGy6G005290 vs. TrEMBL
Match: tr|A0A0A0K8V0|A0A0A0K8V0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067430 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 8.9e-33
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MKFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPW 60
          MKFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPW
Sbjct: 1  MKFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPW 60

Query: 61 RNSDAATEAGKEN 74
          RNSDAATEAGKEN
Sbjct: 61 RNSDAATEAGKEN 73

[Close]
BLAST of CsGy6G005290 vs. TrEMBL
Match: tr|A0A059B4D8|A0A059B4D8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H03704 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.7e-23
Identity = 53/68 (77.94%), Postives = 61/68 (89.71%), Query Frame = 0 

Query: 1  MKFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPW 60
          +KFLDWYVKIG  SAL+GGSMELFMIK+GFYDKV  +ESE+ AWENSPEAQA+REALNPW
Sbjct: 3  VKFLDWYVKIGVFSALVGGSMELFMIKTGFYDKVTELESEKRAWENSPEAQAVREALNPW 62

Query: 61 RNSDAATE 69
          RN DA ++
Sbjct: 63 RNRDAESK 70

[Close]
BLAST of CsGy6G005290 vs. TrEMBL
Match: tr|A0A2I0IX90|A0A2I0IX90_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_031338 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.9e-23
Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 0 

Query: 1  MKFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPW 60
          MKFLDWYVKI  VSALIGGSMELFMIK+GFYDKV V+ESE+ AWEN+PEAQA+REALNPW
Sbjct: 1  MKFLDWYVKIAVVSALIGGSMELFMIKTGFYDKVTVLESEKRAWENAPEAQAVREALNPW 60

Query: 61 RN 63
          RN
Sbjct: 61 RN 62

[Close]
BLAST of CsGy6G005290 vs. TrEMBL
Match: tr|A0A251UTB0|A0A251UTB0_HELAN (Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr05g0154771 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-22
Identity = 53/65 (81.54%), Postives = 59/65 (90.77%), Query Frame = 0 

Query: 1  MKFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPW 60
          MKFLDWY+KIG VSA IGGSME FMI +GFYDKV V+ESE+ AWENSPEAQA+REALNPW
Sbjct: 1  MKFLDWYLKIGFVSAAIGGSMEYFMINTGFYDKVTVLESEKRAWENSPEAQAMREALNPW 60

Query: 61 RNSDA 66
          RN+DA
Sbjct: 61 RNTDA 65

[Close]
BLAST of CsGy6G005290 vs. TrEMBL
Match: tr|A0A151U461|A0A151U461_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_006780 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-22
Identity = 52/65 (80.00%), Postives = 60/65 (92.31%), Query Frame = 0 

Query: 1  MKFLDWYVKIGTVSALIGGSMELFMIKSGFYDKVAVIESERLAWENSPEAQAIREALNPW 60
          MKFLDWY+KIG VSAL+G SME+FMIK+GFYDKV V+ESE+ AWENSP+AQAIREALNPW
Sbjct: 1  MKFLDWYLKIGVVSALVGASMEMFMIKTGFYDKVTVLESEKRAWENSPDAQAIREALNPW 60

Query: 61 RNSDA 66
          R+ DA
Sbjct: 61 RHIDA 65

The following BLAST results are available for this feature:
BLAST of CsGy6G005290 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46185.11.3e-32100.00hypothetical protein Csa_6G067430 [Cucumis sativus][more]
XP_022138621.15.5e-2681.94uncharacterized protein LOC111009736 [Momordica charantia][more]
XP_022959449.15.5e-2683.33uncharacterized protein LOC111460420 [Cucurbita moschata] >XP_022959450.1 unchar... [more]
XP_023006006.15.5e-2683.33uncharacterized protein LOC111498883 [Cucurbita maxima][more]
XP_023548311.15.5e-2683.33uncharacterized protein LOC111806987 [Cucurbita pepo subsp. pepo][more]
BLAST of CsGy6G005290 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G62450.16.2e-2477.27unknown protein[more]
BLAST of CsGy6G005290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy6G005290 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K8V0|A0A0A0K8V0_CUCSA8.9e-33100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067430 PE=4 SV=1[more]
tr|A0A059B4D8|A0A059B4D8_EUCGR3.7e-2377.94Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H03704 PE=4 SV... [more]
tr|A0A2I0IX90|A0A2I0IX90_PUNGR4.9e-2385.48Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_031338 PE=4 SV=1[more]
tr|A0A251UTB0|A0A251UTB0_HELAN1.1e-2281.54Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr05g0154771 PE... [more]
tr|A0A151U461|A0A151U461_CAJCA1.1e-2280.00Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_006780 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G005290.1CsGy6G005290.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36377:SF1SUBFAMILY NOT NAMEDcoord: 1..68
NoneNo IPR availablePANTHERPTHR36377FAMILY NOT NAMEDcoord: 1..68

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G005290Cla009340Watermelon (97103) v1cgybwmB510
CsGy6G005290Csa6G067430Cucumber (Chinese Long) v2cgybcuB282
CsGy6G005290ClCG06G005480Watermelon (Charleston Gray)cgybwcgB444
CsGy6G005290CSPI06G05330Wild cucumber (PI 183967)cgybcpiB288
CsGy6G005290CmaCh17G003000Cucurbita maxima (Rimu)cgybcmaB754
CsGy6G005290CmoCh17G002880Cucurbita moschata (Rifu)cgybcmoB736
CsGy6G005290Lsi09G013880Bottle gourd (USVL1VR-Ls)cgyblsiB361
CsGy6G005290Cp4.1LG12g02470Cucurbita pepo (Zucchini)cgybcpeB724
CsGy6G005290Cla97C06G114990Watermelon (97103) v2cgybwmbB452
CsGy6G005290Bhi12G001564Wax gourdcgybwgoB523
CsGy6G005290Carg05481Silver-seed gourdcarcgybB0075
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G005290Wild cucumber (PI 183967)cgybcpiB266
CsGy6G005290Silver-seed gourdcarcgybB0334
CsGy6G005290Silver-seed gourdcarcgybB0606
CsGy6G005290Cucumber (Chinese Long) v3cgybcucB271
CsGy6G005290Cucumber (Chinese Long) v3cgybcucB298
CsGy6G005290Watermelon (97103) v2cgybwmbB438
CsGy6G005290Wax gourdcgybwgoB532
CsGy6G005290Cucumber (Gy14) v2cgybcgybB104
CsGy6G005290Cucurbita maxima (Rimu)cgybcmaB739
CsGy6G005290Cucurbita maxima (Rimu)cgybcmaB865
CsGy6G005290Cucurbita moschata (Rifu)cgybcmoB719
CsGy6G005290Cucurbita moschata (Rifu)cgybcmoB847
CsGy6G005290Cucurbita moschata (Rifu)cgybcmoB839
CsGy6G005290Cucurbita pepo (Zucchini)cgybcpeB786
CsGy6G005290Cucurbita pepo (Zucchini)cgybcpeB836
CsGy6G005290Cucurbita pepo (Zucchini)cgybcpeB894
CsGy6G005290Cucumber (Chinese Long) v2cgybcuB258
CsGy6G005290Bottle gourd (USVL1VR-Ls)cgyblsiB428
CsGy6G005290Melon (DHL92) v3.5.1cgybmeB369
CsGy6G005290Melon (DHL92) v3.5.1cgybmeB437
CsGy6G005290Melon (DHL92) v3.6.1cgybmedB370
CsGy6G005290Melon (DHL92) v3.6.1cgybmedB431
CsGy6G005290Watermelon (Charleston Gray)cgybwcgB433
CsGy6G005290Watermelon (97103) v1cgybwmB461