CsGy6G002120 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G002120
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionHistone H4
LocationChr6 : 1521226 .. 1521926 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCGGCCGCGGCAAGGGAGGCAAGGGTTTGGGAAAGGGAGGAGCCAAGCGTCACCGCAAAGTCTTGAGAGATAACATTCAAGGTATTACAAAGCCTGCAATTCGCCGTTTGGCTCGTCGTGGCGGTGTCAAGCGAATCAGCGGTTTGATTTATGAAGAAACCAGAGGTGTTCTGAAGATCTTCCTTGAGAATGTTATCCGTGATGCTGTGACTTACACTGAGCACGCTAGGAGGAAGACGGTGACCGCCATGGATGTGGTTTATGCTTTGAAAAGGCAGGGAAGGACTTTGTACGGTTTCGGAGGTTAGGTTGTAGATTAATCCAATGGAGGATTGTAGATCTTGGCTTTAGATCTGGTTTTTCTTTCTTAGCGTTTATAAATTTTTTCTTCTCTTTTTAGGATTTCATGTACCCTAGTCCCTGTTATTCAGTAATTGAAGTATTACTCGAATCATGATTCGATCTTCTCATCTCTCTCTTCCTTCAATTTGTTTCGTTCTTAGGGTTCATATAGTCTGGTAATGTTGGATGATTAATATTTGGTGTATTGTGTTTTGTGAGTGTATAAAGATAATGAATAGGCATTGAAGCTAAATTTCGGCATAAACCAGTTGAATGTTTATGATTTGATCAATGGTTATGTTCGTTAGATTTTGAATTTGGGATGTATGCTGCGGTGTTCTTGACATCTTTCTAA

mRNA sequence

ATGTCCGGCCGCGGCAAGGGAGGCAAGGGTTTGGGAAAGGGAGGAGCCAAGCGTCACCGCAAAGTCTTGAGAGATAACATTCAAGGTATTACAAAGCCTGCAATTCGCCGTTTGGCTCGTCGTGGCGGTGTCAAGCGAATCAGCGGTTTGATTTATGAAGAAACCAGAGGTGTTCTGAAGATCTTCCTTGAGAATGTTATCCGTGATGCTGTGACTTACACTGAGCACGCTAGGAGGAAGACGGTGACCGCCATGGATGTGGTTTATGCTTTGAAAAGGCAGGGAAGGACTTTGTACGGTTTCGGAGATTTTGAATTTGGGATGTATGCTGCGGTGTTCTTGACATCTTTCTAA

Coding sequence (CDS)

ATGTCCGGCCGCGGCAAGGGAGGCAAGGGTTTGGGAAAGGGAGGAGCCAAGCGTCACCGCAAAGTCTTGAGAGATAACATTCAAGGTATTACAAAGCCTGCAATTCGCCGTTTGGCTCGTCGTGGCGGTGTCAAGCGAATCAGCGGTTTGATTTATGAAGAAACCAGAGGTGTTCTGAAGATCTTCCTTGAGAATGTTATCCGTGATGCTGTGACTTACACTGAGCACGCTAGGAGGAAGACGGTGACCGCCATGGATGTGGTTTATGCTTTGAAAAGGCAGGGAAGGACTTTGTACGGTTTCGGAGATTTTGAATTTGGGATGTATGCTGCGGTGTTCTTGACATCTTTCTAA

Protein sequence

MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGDFEFGMYAAVFLTSF
Homology
[Close]
BLAST of CsGy6G002120 vs. NCBI nr
Match: XP_016448403.1 (PREDICTED: uncharacterized protein LOC107773508 [Nicotiana tabacum])

HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48
Identity = 105/116 (90.52%), Postives = 108/116 (93.10%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGDFEFGMYAAVFLTS 117
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG + + +    F TS
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGGYGYLLVIGFFCTS 116

[Close]
BLAST of CsGy6G002120 vs. NCBI nr
Match: XP_009017686.1 (hypothetical protein HELRODRAFT_172808 [Helobdella robusta] >XP_009017690.1 hypothetical protein HELRODRAFT_172812 [Helobdella robusta] >ESO04417.1 hypothetical protein HELRODRAFT_172808 [Helobdella robusta] >ESO04421.1 hypothetical protein HELRODRAFT_172812 [Helobdella robusta])

HSP 1 Score: 200.3 bits (508), Expect = 3.6e-48
Identity = 102/104 (98.08%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGDF 105
           +FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGDF
Sbjct: 61  VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGDF 104

[Close]
BLAST of CsGy6G002120 vs. NCBI nr
Match: KJB20142.1 (hypothetical protein B456_003G134900 [Gossypium raimondii])

HSP 1 Score: 200.3 bits (508), Expect = 3.6e-48
Identity = 104/108 (96.30%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGDFEFGM 109
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG F+  M
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGGFQSTM 108

[Close]
BLAST of CsGy6G002120 vs. NCBI nr
Match: XP_016438059.1 (PREDICTED: uncharacterized protein LOC107764046 [Nicotiana tabacum])

HSP 1 Score: 200.3 bits (508), Expect = 3.6e-48
Identity = 107/117 (91.45%), Postives = 110/117 (94.02%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGDFEFGMYAAVFLTSF 118
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG+ +  +Y A  LT F
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGE-QPSIYKARLLTLF 116

[Close]
BLAST of CsGy6G002120 vs. NCBI nr
Match: PPR96889.1 (hypothetical protein GOBAR_AA23770 [Gossypium barbadense])

HSP 1 Score: 200.3 bits (508), Expect = 3.6e-48
Identity = 103/104 (99.04%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGDF 105
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG+F
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGEF 104

[Close]
BLAST of CsGy6G002120 vs. TAIR10
Match: AT1G07660.1 (Histone superfamily protein)

HSP 1 Score: 197.2 bits (500), Expect = 5.6e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 103
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]
BLAST of CsGy6G002120 vs. TAIR10
Match: AT1G07820.1 (Histone superfamily protein)

HSP 1 Score: 197.2 bits (500), Expect = 5.6e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 103
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]
BLAST of CsGy6G002120 vs. TAIR10
Match: AT2G28740.1 (histone H4)

HSP 1 Score: 197.2 bits (500), Expect = 5.6e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 103
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]
BLAST of CsGy6G002120 vs. TAIR10
Match: AT3G45930.1 (Histone superfamily protein)

HSP 1 Score: 197.2 bits (500), Expect = 5.6e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 103
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]
BLAST of CsGy6G002120 vs. TAIR10
Match: AT3G53730.1 (Histone superfamily protein)

HSP 1 Score: 197.2 bits (500), Expect = 5.6e-51
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 103
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]
BLAST of CsGy6G002120 vs. Swiss-Prot
Match: sp|P62785|H41_WHEAT (Histone H4 variant TH011 OS=Triticum aestivum OX=4565 PE=3 SV=2)

HSP 1 Score: 197.2 bits (500), Expect = 1.0e-49
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 103
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]
BLAST of CsGy6G002120 vs. Swiss-Prot
Match: sp|P59259|H4_ARATH (Histone H4 OS=Arabidopsis thaliana OX=3702 GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 197.2 bits (500), Expect = 1.0e-49
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 103
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]
BLAST of CsGy6G002120 vs. Swiss-Prot
Match: sp|Q6PMI5|H4_CHEMJ (Histone H4 OS=Chelidonium majus OX=71251 PE=3 SV=3)

HSP 1 Score: 197.2 bits (500), Expect = 1.0e-49
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 103
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]
BLAST of CsGy6G002120 vs. Swiss-Prot
Match: sp|Q6WZ83|H4_EUCGL (Histone H4 OS=Eucalyptus globulus OX=34317 PE=3 SV=3)

HSP 1 Score: 197.2 bits (500), Expect = 1.0e-49
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 103
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]
BLAST of CsGy6G002120 vs. Swiss-Prot
Match: sp|Q6LAF3|H4_FLATR (Histone H4 OS=Flaveria trinervia OX=4227 GN=hh4 PE=3 SV=3)

HSP 1 Score: 197.2 bits (500), Expect = 1.0e-49
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 103
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG 102

[Close]
BLAST of CsGy6G002120 vs. TrEMBL
Match: tr|A0A1S3Y8K5|A0A1S3Y8K5_TOBAC (Histone H4 OS=Nicotiana tabacum OX=4097 GN=LOC107773508 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 8.3e-49
Identity = 105/116 (90.52%), Postives = 108/116 (93.10%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGDFEFGMYAAVFLTS 117
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG + + +    F TS
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGGYGYLLVIGFFCTS 116

[Close]
BLAST of CsGy6G002120 vs. TrEMBL
Match: tr|T1F5Y6|T1F5Y6_HELRO (Histone H4 OS=Helobdella robusta OX=6412 GN=20204235 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.4e-48
Identity = 102/104 (98.08%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGDF 105
           +FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGDF
Sbjct: 61  VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGDF 104

[Close]
BLAST of CsGy6G002120 vs. TrEMBL
Match: tr|A0A287PBT3|A0A287PBT3_HORVV (Histone H4 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.4e-48
Identity = 103/105 (98.10%), Postives = 104/105 (99.05%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGDFE 106
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG +E
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGGYE 105

[Close]
BLAST of CsGy6G002120 vs. TrEMBL
Match: tr|A0A0D2MND9|A0A0D2MND9_GOSRA (Histone H4 OS=Gossypium raimondii OX=29730 GN=B456_003G134900 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.4e-48
Identity = 104/108 (96.30%), Postives = 105/108 (97.22%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGDFEFGM 109
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG F+  M
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGGFQSTM 108

[Close]
BLAST of CsGy6G002120 vs. TrEMBL
Match: tr|A0A2P5X0L6|A0A2P5X0L6_GOSBA (Histone H4 OS=Gossypium barbadense OX=3634 GN=GOBAR_AA23770 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.4e-48
Identity = 103/104 (99.04%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGDF 105
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFG+F
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGEF 104

The following BLAST results are available for this feature:
BLAST of CsGy6G002120 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016448403.11.3e-4890.52PREDICTED: uncharacterized protein LOC107773508 [Nicotiana tabacum][more]
XP_009017686.13.6e-4898.08hypothetical protein HELRODRAFT_172808 [Helobdella robusta] >XP_009017690.1 hypo... [more]
KJB20142.13.6e-4896.30hypothetical protein B456_003G134900 [Gossypium raimondii][more]
XP_016438059.13.6e-4891.45PREDICTED: uncharacterized protein LOC107764046 [Nicotiana tabacum][more]
PPR96889.13.6e-4899.04hypothetical protein GOBAR_AA23770 [Gossypium barbadense][more]
BLAST of CsGy6G002120 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07660.15.6e-51100.00Histone superfamily protein[more]
AT1G07820.15.6e-51100.00Histone superfamily protein[more]
AT2G28740.15.6e-51100.00histone H4[more]
AT3G45930.15.6e-51100.00Histone superfamily protein[more]
AT3G53730.15.6e-51100.00Histone superfamily protein[more]
BLAST of CsGy6G002120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P62785|H41_WHEAT1.0e-49100.00Histone H4 variant TH011 OS=Triticum aestivum OX=4565 PE=3 SV=2[more]
sp|P59259|H4_ARATH1.0e-49100.00Histone H4 OS=Arabidopsis thaliana OX=3702 GN=At1g07660 PE=1 SV=2[more]
sp|Q6PMI5|H4_CHEMJ1.0e-49100.00Histone H4 OS=Chelidonium majus OX=71251 PE=3 SV=3[more]
sp|Q6WZ83|H4_EUCGL1.0e-49100.00Histone H4 OS=Eucalyptus globulus OX=34317 PE=3 SV=3[more]
sp|Q6LAF3|H4_FLATR1.0e-49100.00Histone H4 OS=Flaveria trinervia OX=4227 GN=hh4 PE=3 SV=3[more]
BLAST of CsGy6G002120 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3Y8K5|A0A1S3Y8K5_TOBAC8.3e-4990.52Histone H4 OS=Nicotiana tabacum OX=4097 GN=LOC107773508 PE=3 SV=1[more]
tr|T1F5Y6|T1F5Y6_HELRO2.4e-4898.08Histone H4 OS=Helobdella robusta OX=6412 GN=20204235 PE=3 SV=1[more]
tr|A0A287PBT3|A0A287PBT3_HORVV2.4e-4898.10Histone H4 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1[more]
tr|A0A0D2MND9|A0A0D2MND9_GOSRA2.4e-4896.30Histone H4 OS=Gossypium raimondii OX=29730 GN=B456_003G134900 PE=3 SV=1[more]
tr|A0A2P5X0L6|A0A2P5X0L6_GOSBA2.4e-4899.04Histone H4 OS=Gossypium barbadense OX=3634 GN=GOBAR_AA23770 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0000786nucleosome
Vocabulary: INTERPRO
TermDefinition
IPR019809Histone_H4_CS
IPR009072Histone-fold
IPR035425CENP-T/H4_C
IPR001951Histone_H4
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0006334 nucleosome assembly
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0004672 protein kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G002120.1CsGy6G002120.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 62..76
score: 95.1
coord: 77..89
score: 90.05
coord: 89..100
score: 97.79
coord: 5..16
score: 95.59
coord: 20..39
score: 93.38
coord: 40..60
score: 93.56
IPR001951Histone H4SMARTSM00417h44coord: 16..90
e-value: 2.0E-29
score: 113.7
IPR001951Histone H4CDDcd00076H4coord: 18..101
e-value: 1.16893E-44
score: 141.484
IPR035425CENP-T/Histone H4, histone foldPFAMPF15511CENP-T_Ccoord: 36..96
e-value: 2.1E-8
score: 34.2
IPR009072Histone-foldGENE3DG3DSA:1.10.20.10coord: 2..103
e-value: 4.7E-60
score: 202.1
IPR009072Histone-foldSUPERFAMILYSSF47113Histone-foldcoord: 3..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 1..102
NoneNo IPR availablePANTHERPTHR10484:SF160SUBFAMILY NOT NAMEDcoord: 1..102
IPR019809Histone H4, conserved sitePROSITEPS00047HISTONE_H4coord: 15..19

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G002120Cla006624Watermelon (97103) v1cgybwmB497
CsGy6G002120Cla016413Watermelon (97103) v1cgybwmB498
CsGy6G002120Csa6G013960Cucumber (Chinese Long) v2cgybcuB282
CsGy6G002120MELO3C019997Melon (DHL92) v3.5.1cgybmeB418
CsGy6G002120ClCG11G005780Watermelon (Charleston Gray)cgybwcgB397
CsGy6G002120CSPI06G02040Wild cucumber (PI 183967)cgybcpiB288
CsGy6G002120CmaCh04G028720Cucurbita maxima (Rimu)cgybcmaB836
CsGy6G002120Lsi03G002740Bottle gourd (USVL1VR-Ls)cgyblsiB409
CsGy6G002120Cp4.1LG01g21730Cucurbita pepo (Zucchini)cgybcpeB798
CsGy6G002120CsaV3_6G002190Cucumber (Chinese Long) v3cgybcucB298
CsGy6G002120Cla97C11G212700Watermelon (97103) v2cgybwmbB403
CsGy6G002120Bhi04G001847Wax gourdcgybwgoB558
CsGy6G002120Carg05948Silver-seed gourdcarcgybB0023
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G002120Cucumber (Chinese Long) v3cgybcucB283
CsGy6G002120Cucumber (Chinese Long) v3cgybcucB292
CsGy6G002120Watermelon (97103) v2cgybwmbB435
CsGy6G002120Watermelon (97103) v2cgybwmbB459
CsGy6G002120Wax gourdcgybwgoB596
CsGy6G002120Cucumber (Gy14) v2cgybcgybB130
CsGy6G002120Cucumber (Gy14) v2cgybcgybB145
CsGy6G002120Cucurbita maxima (Rimu)cgybcmaB741
CsGy6G002120Cucurbita maxima (Rimu)cgybcmaB832
CsGy6G002120Cucurbita maxima (Rimu)cgybcmaB840
CsGy6G002120Cucurbita maxima (Rimu)cgybcmaB842
CsGy6G002120Cucurbita moschata (Rifu)cgybcmoB722
CsGy6G002120Cucurbita moschata (Rifu)cgybcmoB812
CsGy6G002120Cucurbita moschata (Rifu)cgybcmoB816
CsGy6G002120Cucurbita moschata (Rifu)cgybcmoB820
CsGy6G002120Cucurbita pepo (Zucchini)cgybcpeB711
CsGy6G002120Cucurbita pepo (Zucchini)cgybcpeB741
CsGy6G002120Cucurbita pepo (Zucchini)cgybcpeB803
CsGy6G002120Cucumber (Chinese Long) v2cgybcuB270
CsGy6G002120Cucumber (Chinese Long) v2cgybcuB277
CsGy6G002120Bottle gourd (USVL1VR-Ls)cgyblsiB396
CsGy6G002120Bottle gourd (USVL1VR-Ls)cgyblsiB424
CsGy6G002120Melon (DHL92) v3.5.1cgybmeB450
CsGy6G002120Melon (DHL92) v3.6.1cgybmedB413
CsGy6G002120Melon (DHL92) v3.6.1cgybmedB445
CsGy6G002120Watermelon (Charleston Gray)cgybwcgB429
CsGy6G002120Watermelon (Charleston Gray)cgybwcgB451
CsGy6G002120Watermelon (97103) v1cgybwmB455
CsGy6G002120Watermelon (97103) v1cgybwmB476
CsGy6G002120Wild cucumber (PI 183967)cgybcpiB277
CsGy6G002120Silver-seed gourdcarcgybB0284
CsGy6G002120Silver-seed gourdcarcgybB0673