Cp4.1LG01g21730 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g21730
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionhistone H4
LocationCp4.1LG01 : 20514771 .. 20515082 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGGCCGTGGAAAGGGAGGCAAGGGGTTGGGGAAAGGAGGAGCTAAGCGTCACAGGAAGGTCTTGAGAGATAATATTCAAGGTATTACGAAGCCTGCTATTCGCCGTTTGGCTCGTAGAGGCGGTGTGAAGCGTATCAGTGGTTTGATTTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCCTCGAGAATGTTATTCGTGATGCTGTTACCTACACAGAGCACGCCAGAAGGAAGACCGTCACCGCTATGGATGTGGTGTATGCCTTGAAAAGGCAGGGAAGGACTTTGTATGGTTTCGGAGGTTAG

mRNA sequence

ATGTCTGGCCGTGGAAAGGGAGGCAAGGGGTTGGGGAAAGGAGGAGCTAAGCGTCACAGGAAGGTCTTGAGAGATAATATTCAAGGTATTACGAAGCCTGCTATTCGCCGTTTGGCTCGTAGAGGCGGTGTGAAGCGTATCAGTGGTTTGATTTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCCTCGAGAATGTTATTCGTGATGCTGTTACCTACACAGAGCACGCCAGAAGGAAGACCGTCACCGCTATGGATGTGGTGTATGCCTTGAAAAGGCAGGGAAGGACTTTGTATGGTTTCGGAGGTTAG

Coding sequence (CDS)

ATGTCTGGCCGTGGAAAGGGAGGCAAGGGGTTGGGGAAAGGAGGAGCTAAGCGTCACAGGAAGGTCTTGAGAGATAATATTCAAGGTATTACGAAGCCTGCTATTCGCCGTTTGGCTCGTAGAGGCGGTGTGAAGCGTATCAGTGGTTTGATTTATGAAGAAACCAGAGGTGTTTTGAAGATCTTCCTCGAGAATGTTATTCGTGATGCTGTTACCTACACAGAGCACGCCAGAAGGAAGACCGTCACCGCTATGGATGTGGTGTATGCCTTGAAAAGGCAGGGAAGGACTTTGTATGGTTTCGGAGGTTAG

Protein sequence

MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Homology
[Close]
BLAST of Cp4.1LG01g21730 vs. Swiss-Prot
Match: H4_EUCGL (Histone H4 OS=Eucalyptus globulus PE=3 SV=3)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. Swiss-Prot
Match: H4_CHEMJ (Histone H4 OS=Chelidonium majus PE=3 SV=3)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. Swiss-Prot
Match: H4_ARATH (Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. Swiss-Prot
Match: H41_WHEAT (Histone H4 variant TH011 OS=Triticum aestivum PE=3 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. Swiss-Prot
Match: H4_PEA (Histone H4 OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 1.8e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. TrEMBL
Match: A2WWR4_ORYSI (Histone H4 OS=Oryza sativa subsp. indica GN=OsI_04340 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. TrEMBL
Match: A9NJR8_PICSI (Histone H4 OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. TrEMBL
Match: A9PA83_POPTR (Histone H4 OS=Populus trichocarpa GN=POPTR_0005s11740g PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. TrEMBL
Match: H9MAC8_PINRA (Histone H4 OS=Pinus radiata GN=0_18315_01 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. TrEMBL
Match: B9MST3_SOYBN (Histone H4 OS=Glycine max GN=GLYMA_02G224100 PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. TAIR10
Match: AT1G07660.1 (AT1G07660.1 Histone superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. TAIR10
Match: AT1G07820.1 (AT1G07820.1 Histone superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. TAIR10
Match: AT2G28740.1 (AT2G28740.1 histone H4)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. TAIR10
Match: AT3G45930.1 (AT3G45930.1 Histone superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. TAIR10
Match: AT3G53730.1 (AT3G53730.1 Histone superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 9.9e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. NCBI nr
Match: gi|976922550|gb|KVI06931.1| (Histone core [Cynara cardunculus var. scolymus])

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 107 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 166

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 167 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 209

[Close]
BLAST of Cp4.1LG01g21730 vs. NCBI nr
Match: gi|641854208|gb|KDO73016.1| (hypothetical protein CISIN_1g047769mg, partial [Citrus sinensis])

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 29  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 88

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 89  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 131

[Close]
BLAST of Cp4.1LG01g21730 vs. NCBI nr
Match: gi|15226944|ref|NP_180441.1| (histone H4 [Arabidopsis thaliana])

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. NCBI nr
Match: gi|960491942|ref|XP_014751185.1| (PREDICTED: uncharacterized protein LOC100841093 [Brachypodium distachyon])

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]
BLAST of Cp4.1LG01g21730 vs. NCBI nr
Match: gi|670426610|ref|XP_008653962.1| (PREDICTED: uncharacterized protein LOC103634138 [Zea mays])

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1 

Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g21730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
H4_EUCGL1.8e-50100.00Histone H4 OS=Eucalyptus globulus PE=3 SV=3[more]
H4_CHEMJ1.8e-50100.00Histone H4 OS=Chelidonium majus PE=3 SV=3[more]
H4_ARATH1.8e-50100.00Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=1 SV=2[more]
H41_WHEAT1.8e-50100.00Histone H4 variant TH011 OS=Triticum aestivum PE=3 SV=2[more]
H4_PEA1.8e-50100.00Histone H4 OS=Pisum sativum PE=1 SV=2[more]
BLAST of Cp4.1LG01g21730 vs. TrEMBL
Match NameE-valueIdentityDescription
A2WWR4_ORYSI2.0e-48100.00Histone H4 OS=Oryza sativa subsp. indica GN=OsI_04340 PE=3 SV=1[more]
A9NJR8_PICSI2.0e-48100.00Histone H4 OS=Picea sitchensis PE=2 SV=1[more]
A9PA83_POPTR2.0e-48100.00Histone H4 OS=Populus trichocarpa GN=POPTR_0005s11740g PE=2 SV=1[more]
H9MAC8_PINRA2.0e-48100.00Histone H4 OS=Pinus radiata GN=0_18315_01 PE=3 SV=1[more]
B9MST3_SOYBN2.0e-48100.00Histone H4 OS=Glycine max GN=GLYMA_02G224100 PE=2 SV=1[more]
BLAST of Cp4.1LG01g21730 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07660.19.9e-52100.00 Histone superfamily protein[more]
AT1G07820.19.9e-52100.00 Histone superfamily protein[more]
AT2G28740.19.9e-52100.00 histone H4[more]
AT3G45930.19.9e-52100.00 Histone superfamily protein[more]
AT3G53730.19.9e-52100.00 Histone superfamily protein[more]
BLAST of Cp4.1LG01g21730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|976922550|gb|KVI06931.1|2.8e-48100.00Histone core [Cynara cardunculus var. scolymus][more]
gi|641854208|gb|KDO73016.1|2.8e-48100.00hypothetical protein CISIN_1g047769mg, partial [Citrus sinensis][more]
gi|15226944|ref|NP_180441.1|2.8e-48100.00histone H4 [Arabidopsis thaliana][more]
gi|960491942|ref|XP_014751185.1|2.8e-48100.00PREDICTED: uncharacterized protein LOC100841093 [Brachypodium distachyon][more]
gi|670426610|ref|XP_008653962.1|2.8e-48100.00PREDICTED: uncharacterized protein LOC103634138 [Zea mays][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006334 nucleosome assembly
biological_process GO:0006468 protein phosphorylation
biological_process GO:0006352 DNA-templated transcription, initiation
cellular_component GO:0009507 chloroplast
cellular_component GO:0005634 nucleus
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009579 thylakoid
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0000786 nucleosome
cellular_component GO:0005730 nucleolus
cellular_component GO:0005829 cytosol
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g21730.1Cp4.1LG01g21730.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g21730MELO3C019996.2Melon (DHL92) v3.6.1cpemedB462
Cp4.1LG01g21730CsaV3_6G002190Cucumber (Chinese Long) v3cpecucB0569
Cp4.1LG01g21730Bhi04G001847Wax gourdcpewgoB0525
Cp4.1LG01g21730CsGy6G002120Cucumber (Gy14) v2cgybcpeB798
Cp4.1LG01g21730Carg05948Silver-seed gourdcarcpeB0034
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g21730Cucurbita pepo (Zucchini)cpecpeB074
Cp4.1LG01g21730Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG01g21730Cucurbita pepo (Zucchini)cpecpeB376
Cp4.1LG01g21730Cucumber (Gy14) v1cgycpeB0344
Cp4.1LG01g21730Cucumber (Gy14) v1cgycpeB0861
Cp4.1LG01g21730Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g21730Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g21730Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g21730Cucurbita moschata (Rifu)cmocpeB614
Cp4.1LG01g21730Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g21730Wild cucumber (PI 183967)cpecpiB412
Cp4.1LG01g21730Wild cucumber (PI 183967)cpecpiB461
Cp4.1LG01g21730Cucumber (Chinese Long) v2cpecuB413
Cp4.1LG01g21730Cucumber (Chinese Long) v2cpecuB460
Cp4.1LG01g21730Bottle gourd (USVL1VR-Ls)cpelsiB328
Cp4.1LG01g21730Bottle gourd (USVL1VR-Ls)cpelsiB339
Cp4.1LG01g21730Watermelon (Charleston Gray)cpewcgB355
Cp4.1LG01g21730Watermelon (Charleston Gray)cpewcgB383
Cp4.1LG01g21730Watermelon (97103) v1cpewmB445
Cp4.1LG01g21730Melon (DHL92) v3.5.1cpemeB397
Cp4.1LG01g21730Melon (DHL92) v3.5.1cpemeB433
Cp4.1LG01g21730Cucumber (Gy14) v2cgybcpeB514
Cp4.1LG01g21730Melon (DHL92) v3.6.1cpemedB505
Cp4.1LG01g21730Silver-seed gourdcarcpeB0374
Cp4.1LG01g21730Silver-seed gourdcarcpeB0892
Cp4.1LG01g21730Cucumber (Chinese Long) v3cpecucB0509
Cp4.1LG01g21730Wax gourdcpewgoB0546