ClCG11G005780 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG11G005780
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Histone H4
Location	CG_Chr11 : 6272579 .. 6272890 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGCCGTGGAAAAGGAGGCAAAGGATTGGGAAAAGGAGGAGCAAAGCGTCATAGAAAGGTTTTGAGGGATAACATTCAAGGAATTACGAAGCCTGCAATTCGGCGATTGGCTCGTAGAGGCGGTGTGAAGCGAATCAGTGGTTTGATCTATGAGGAAACCAGAGGCGTTTTGAAGATCTTCCTTGAGAATGTGATTCGCGATGCCGTGACCTACACAGAGCACGCCAGGAGGAAGACGGTGACCGCCATGGATGTCGTTTATGCGCTGAAAAGGCAGGGAAGGACCTTGTACGGTTTCGGTGGTTAG

mRNA sequence

ATGTCAGGCCGTGGAAAAGGAGGCAAAGGATTGGGAAAAGGAGGAGCAAAGCGTCATAGAAAGGTTTTGAGGGATAACATTCAAGGAATTACGAAGCCTGCAATTCGGCGATTGGCTCGTAGAGGCGGTGTGAAGCGAATCAGTGGTTTGATCTATGAGGAAACCAGAGGCGTTTTGAAGATCTTCCTTGAGAATGTGATTCGCGATGCCGTGACCTACACAGAGCACGCCAGGAGGAAGACGGTGACCGCCATGGATGTCGTTTATGCGCTGAAAAGGCAGGGAAGGACCTTGTACGGTTTCGGTGGTTAG

Coding sequence (CDS)

ATGTCAGGCCGTGGAAAAGGAGGCAAAGGATTGGGAAAAGGAGGAGCAAAGCGTCATAGAAAGGTTTTGAGGGATAACATTCAAGGAATTACGAAGCCTGCAATTCGGCGATTGGCTCGTAGAGGCGGTGTGAAGCGAATCAGTGGTTTGATCTATGAGGAAACCAGAGGCGTTTTGAAGATCTTCCTTGAGAATGTGATTCGCGATGCCGTGACCTACACAGAGCACGCCAGGAGGAAGACGGTGACCGCCATGGATGTCGTTTATGCGCTGAAAAGGCAGGGAAGGACCTTGTACGGTTTCGGTGGTTAG

Protein sequence

MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG

Homology

[Close]

BLAST of ClCG11G005780 vs. Swiss-Prot
Match: H4_EUCGL (Histone H4 OS=Eucalyptus globulus PE=3 SV=3)

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-52
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of ClCG11G005780 vs. Swiss-Prot
Match: H4_CHEMJ (Histone H4 OS=Chelidonium majus PE=3 SV=3)

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-52
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of ClCG11G005780 vs. Swiss-Prot
Match: H4_ARATH (Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-52
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of ClCG11G005780 vs. Swiss-Prot
Match: H41_WHEAT (Histone H4 variant TH011 OS=Triticum aestivum PE=3 SV=2)

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-52
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of ClCG11G005780 vs. Swiss-Prot
Match: H4_PEA (Histone H4 OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-52
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of ClCG11G005780 vs. TrEMBL
Match: Q6NR90_ARATH (Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of ClCG11G005780 vs. TrEMBL
Match: L0P1L9_9POAL (Histone H4 OS=Phyllostachys edulis GN=PH01B001I13.20 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of ClCG11G005780 vs. TrEMBL
Match: A0A0B2SBA2_GLYSO (Histone H4 OS=Glycine soja GN=glysoja_005470 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of ClCG11G005780 vs. TrEMBL
Match: A0A0A0LSH2_CUCSA (Histone H4 OS=Cucumis sativus GN=Csa_1G084320 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of ClCG11G005780 vs. TrEMBL
Match: A0A0D3C2P6_BRAOL (Histone H4 OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.1e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of ClCG11G005780 vs. TAIR10
Match: AT1G07660.1 (AT1G07660.1 Histone superfamily protein)

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-53
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of ClCG11G005780 vs. TAIR10
Match: AT1G07820.1 (AT1G07820.1 Histone superfamily protein)

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-53
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of ClCG11G005780 vs. TAIR10
Match: AT2G28740.1 (AT2G28740.1 histone H4)

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-53
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of ClCG11G005780 vs. TAIR10
Match: AT3G45930.1 (AT3G45930.1 Histone superfamily protein)

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-53
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of ClCG11G005780 vs. TAIR10
Match: AT3G53730.1 (AT3G53730.1 Histone superfamily protein)

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-53
Identity = 103/103 (100.00%), Postives = 101/103 (98.06%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of ClCG11G005780 vs. NCBI nr
Match: gi|976922550|gb|KVI06931.1| (Histone core [Cynara cardunculus var. scolymus])

HSP 1 Score: 206.1 bits (523), Expect = 3.0e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 107 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 166

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 167 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 209

[Close]

BLAST of ClCG11G005780 vs. NCBI nr
Match: gi|629086337|gb|KCW52694.1| (hypothetical protein EUGRSUZ_J02062, partial [Eucalyptus grandis])

HSP 1 Score: 206.1 bits (523), Expect = 3.0e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 4   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 63

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 64  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 106

[Close]

BLAST of ClCG11G005780 vs. NCBI nr
Match: gi|413947466|gb|AFW80115.1| (hypothetical protein ZEAMMB73_313798 [Zea mays])

HSP 1 Score: 206.1 bits (523), Expect = 3.0e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 119 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 178

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 179 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 221

[Close]

BLAST of ClCG11G005780 vs. NCBI nr
Match: gi|960491942|ref|XP_014751185.1| (PREDICTED: uncharacterized protein LOC100841093 [Brachypodium distachyon])

HSP 1 Score: 206.1 bits (523), Expect = 3.0e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 152 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 211

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 212 IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 254

HSP 2 Score: 206.1 bits (523), Expect = 3.0e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1


Query: 1   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 60
           MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
Sbjct: 29  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK 88

Query: 61  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 104
           IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct: 89  IFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 131

The following BLAST results are available for this feature:

BLAST of ClCG11G005780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
H4_EUCGL	1.9e-52	100.00	Histone H4 OS=Eucalyptus globulus PE=3 SV=3	[more]
H4_CHEMJ	1.9e-52	100.00	Histone H4 OS=Chelidonium majus PE=3 SV=3	[more]
H4_ARATH	1.9e-52	100.00	Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=1 SV=2	[more]
H41_WHEAT	1.9e-52	100.00	Histone H4 variant TH011 OS=Triticum aestivum PE=3 SV=2	[more]
H4_PEA	1.9e-52	100.00	Histone H4 OS=Pisum sativum PE=1 SV=2	[more]

BLAST of ClCG11G005780 vs. TrEMBL


Match Name	E-value	Identity	Description
Q6NR90_ARATH	2.1e-50	100.00	Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=2 SV=1	[more]
L0P1L9_9POAL	2.1e-50	100.00	Histone H4 OS=Phyllostachys edulis GN=PH01B001I13.20 PE=3 SV=1	[more]
A0A0B2SBA2_GLYSO	2.1e-50	100.00	Histone H4 OS=Glycine soja GN=glysoja_005470 PE=3 SV=1	[more]
A0A0A0LSH2_CUCSA	2.1e-50	100.00	Histone H4 OS=Cucumis sativus GN=Csa_1G084320 PE=3 SV=1	[more]
A0A0D3C2P6_BRAOL	2.1e-50	100.00	Histone H4 OS=Brassica oleracea var. oleracea PE=3 SV=1	[more]

BLAST of ClCG11G005780 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G07660.1	1.1e-53	100.00	Histone superfamily protein	[more]
AT1G07820.1	1.1e-53	100.00	Histone superfamily protein	[more]
AT2G28740.1	1.1e-53	100.00	histone H4	[more]
AT3G45930.1	1.1e-53	100.00	Histone superfamily protein	[more]
AT3G53730.1	1.1e-53	100.00	Histone superfamily protein	[more]

BLAST of ClCG11G005780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|976922550\|gb\|KVI06931.1\|	3.0e-50	100.00	Histone core [Cynara cardunculus var. scolymus]	[more]
gi\|629086337\|gb\|KCW52694.1\|	3.0e-50	100.00	hypothetical protein EUGRSUZ_J02062, partial [Eucalyptus grandis]	[more]
gi\|413947466\|gb\|AFW80115.1\|	3.0e-50	100.00	hypothetical protein ZEAMMB73_313798 [Zea mays]	[more]
gi\|960491942\|ref\|XP_014751185.1\|	3.0e-50	100.00	PREDICTED: uncharacterized protein LOC100841093 [Brachypodium distachyon]	[more]
gi\|960491942\|ref\|XP_014751185.1\|	3.0e-50	100.00	PREDICTED: uncharacterized protein LOC100841093 [Brachypodium distachyon]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0016597	amino acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G005780.1	ClCG11G005780.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG11G005780	Csa6G013960	Cucumber (Chinese Long) v2	cuwcgB429
ClCG11G005780	MELO3C019997	Melon (DHL92) v3.5.1	mewcgB268
ClCG11G005780	Cla016413	Watermelon (97103) v1	wcgwmB107
ClCG11G005780	Cla006624	Watermelon (97103) v1	wcgwmB108
ClCG11G005780	Cla97C11G212700	Watermelon (97103) v2	wcgwmbB065
ClCG11G005780	Bhi04G001847	Wax gourd	wcgwgoB158
ClCG11G005780	CSPI06G02040	Wild cucumber (PI 183967)	cpiwcgB450
ClCG11G005780	Cucsa.326090	Cucumber (Gy14) v1	cgywcgB562
ClCG11G005780	CmaCh04G028720	Cucurbita maxima (Rimu)	cmawcgB619
ClCG11G005780	CsGy6G002120	Cucumber (Gy14) v2	cgybwcgB397
ClCG11G005780	MELO3C019996.2	Melon (DHL92) v3.6.1	medwcgB259
ClCG11G005780	Carg05948	Silver-seed gourd	carwcgB0019
ClCG11G005780	CsaV3_6G002190	Cucumber (Chinese Long) v3	cucwcgB452

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG11G005780	Cucurbita moschata (Rifu)	cmowcgB240
ClCG11G005780	Cucurbita moschata (Rifu)	cmowcgB572
ClCG11G005780	Cucurbita moschata (Rifu)	cmowcgB621
ClCG11G005780	Cucurbita moschata (Rifu)	cmowcgB625
ClCG11G005780	Wild cucumber (PI 183967)	cpiwcgB294
ClCG11G005780	Cucumber (Chinese Long) v2	cuwcgB361
ClCG11G005780	Melon (DHL92) v3.5.1	mewcgB511
ClCG11G005780	Watermelon (97103) v1	wcgwmB094
ClCG11G005780	Watermelon (97103) v1	wcgwmB100
ClCG11G005780	Cucurbita pepo (Zucchini)	cpewcgB060
ClCG11G005780	Cucurbita pepo (Zucchini)	cpewcgB159
ClCG11G005780	Cucurbita pepo (Zucchini)	cpewcgB355
ClCG11G005780	Bottle gourd (USVL1VR-Ls)	lsiwcgB124
ClCG11G005780	Bottle gourd (USVL1VR-Ls)	lsiwcgB226
ClCG11G005780	Bottle gourd (USVL1VR-Ls)	lsiwcgB263
ClCG11G005780	Cucumber (Gy14) v2	cgybwcgB262
ClCG11G005780	Melon (DHL92) v3.6.1	medwcgB506
ClCG11G005780	Silver-seed gourd	carwcgB0255
ClCG11G005780	Silver-seed gourd	carwcgB0607
ClCG11G005780	Silver-seed gourd	carwcgB0644
ClCG11G005780	Cucumber (Chinese Long) v3	cucwcgB293
ClCG11G005780	Cucumber (Chinese Long) v3	cucwcgB384
ClCG11G005780	Watermelon (97103) v2	wcgwmbB063
ClCG11G005780	Watermelon (97103) v2	wcgwmbB072
ClCG11G005780	Watermelon (97103) v2	wcgwmbB080
ClCG11G005780	Wax gourd	wcgwgoB138
ClCG11G005780	Wax gourd	wcgwgoB169
ClCG11G005780	Watermelon (Charleston Gray)	wcgwcgB040
ClCG11G005780	Watermelon (Charleston Gray)	wcgwcgB067
ClCG11G005780	Watermelon (Charleston Gray)	wcgwcgB076
ClCG11G005780	Cucumber (Gy14) v1	cgywcgB213
ClCG11G005780	Cucumber (Gy14) v1	cgywcgB243
ClCG11G005780	Cucurbita maxima (Rimu)	cmawcgB252
ClCG11G005780	Cucurbita maxima (Rimu)	cmawcgB575
ClCG11G005780	Cucurbita maxima (Rimu)	cmawcgB624
ClCG11G005780	Cucurbita maxima (Rimu)	cmawcgB625