CsGy5G029440 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G029440
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	COX assembly mitochondrial protein
Location	Chr5 : 32785364 .. 32789183 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTGGGTTTTAAGTTTTCAACAAGCTAAATAAATAAAATAATAGGAAACTGGAGAATCGGAATTGAGACTCCGGAGTTGGCTTCGAAGGTCCTACTTCCGACGAAATCAAGGGGATTTGACTGCTAATTCATGGGTTACATTCAGGAAGCTCGGGAAAATCATGTGAAGAAGAAAGTAGAGGAAGGTATTATCAATTCTTGCTCTTTTTTTTTATGGGTCACTAAAAATTTTTAGTTTAGTATATCTGCAAGTGGTGTAGAAGCCTTTTGGAAATCTGCTGATGATTTTTTTTCTTTTTTGTTCATTTCCAGCTTTGCGCAGCAAAATGAAGCAGAAAGCGTTGAAGGAGTGCGATCGTTACGCTTCGAAATATGCTGAATGCGCTTATGGCAGAACGTTATCTGTCGTTTTCAAGTGTCGTAATCAAGCAAAAGAATTGAACAATTGTCTCCACTCATAGTGAGTTTCTGATTGTTTTGTTTTGCTTTGCTTTTCGGTGGTTGTGTGAAGTTTCAGCTGCGTTTTGTTCAGATTGGTTTCTCTTCTGTTCATAACAACGTGCATTATCATCATGTTTAGTTTAATTGATAAGACACACTGTTTTTATTGCCTGTTAATTGAGCGTTTCAGTGGTAGTAACTTGAGGTGCTGGTGTGATTTGTGAAATACCTAGTATGGATCGTAATCTCAAAGGATTGAGTTTGGGTTCAGAGACATGTTGGTGGCACTGAAAGTAAGTCAAGAGCTGTAGCCATATGGCCCAACATGCGACTCTTATGGAGATGAATAACTACGGAGTACTTACCGCCTTCCATGTTCATGGAAATATTTATTTTTTTTCTTGATATTCATGAGCATTTGGGTCAACTTGCACACACCTCAATTACTAATCTCAAGGAACAACTCACTTGTCTCTACAACATTTGAGAGCCAAGACAAGTCGTTGGATTTTAAATCCTAGGTAGGTGATCATAGTTGATTGATTTCATAACCTTTTTATCCTTTATCAAGATCGCCCCTATTTATCGCTAGGTCAAGTCATGATGGTTAAAATTTTCATAAAAATGAAAAAGGTCTTTTCTTAGAATGTATTTTGAGTGGGGGTGGGGATGTCACTCTTCATCACCTGCAGGCCACAAGTCACCTATAGAGTGGGCGAGTCAGCATTTAGTGATTTTTAACAGTAGCAAAAATCTTTTAGTTGATGTCAGTTCGCATGCATTGTGCTTCTTCTTAAGGACAAAGAGTTTAATTAGAGGGTATAGCCCTGAAACCAATAATATCTATGGCTCAACATGAGCGTTAAGTGATGCTGTACCACAAGGTGGATGTTCAAGCAAGCTTTTACAAAAATGTAAGGGTTCATTGTTTGGTTATAGATATATGCCCACAACCAAATGGCAGCGGTTATACATACATGATCTAAGTGGGGCAGTCTTATGCGGCAGTTATCAGCTAGCAATGGCCTTGTCCTAGCAAGAGAAACAAGAGTCATCTTGGGTGTTATGATTTATCAAGTGCACCAAGCAATAGTGCATTCACAATGCAAAATGGTCTTATCCTTGTTAGGATTGTTAGTTATCTCTGCTTTCTGAAGTATATTTAATTTTATTGTTTGAAGGTGAGTTGGGCTGTTATTTCTTTTGGGCTTCTATGTAAAGAACCCTGTATTGGTTCCGTAAACCCCAAAAGTTATCAATTCTGATTAAGAGTCAGCTCAGTTCTTGAGTAGAGGCAAGATAAAACTCTAAGGGGACGTTTGGAGCGTTGTGTTGGTTATTATAGCCAGTGGATATAAATAGTTAATATTTGGGGTGCAAACTATTTTATTATGGGTTATAATAGTTTGTGTTTGAGGTTTAAACTATTTTTGTTTGGGTTGTAAATAGCAAACAGTTTAGCTAAGAAGAAAAAAGAGGGTGGATGATAAATGGTAAATAATGTACCAAAAAGAGTTTTGAAATAGTATTTACTATATTTATACTTAGTCGTAGGTTATAAATGATGGTACATCCCACTATTATAGTTGGTGAACCAAACATGGAAAGTCCACCAACTTCTAGTTGGGGCATCAAATGGTGGTCCTTAAGCTCAAGCTGGTTATTGGTGCATAGAGTAAAAGGATTGCATGTACATACAACGGGCATGATCAAGAGTCTGTTGGGAAAATGAGCTTCAGGTTGAGCCAACTATGGGCGAGAAGGTGCTCATTTGAGTAACTTGAGTGAGTGCGACCTAGTGGACTCGGTATCAAAAGGAAGAACCCAGCGTTGACCTTAACTTTTGTGAGAGGATCTTGAATAGAGTTTTGAGGTGGAATTTGCGGCAGGTTATGAGTCAGAGTAGTATCTAGCAACACAAATATAAAGTGGTTTGATCAATATTGATGATTTGATTGGAGAATTCATGCCATATTATATAGAACCAAACACTAGTGCTCTTTTTTCTTTGAAACGGAGACAAAAACTTCTTTATTAATAAGAACTCTAAGTACAAGAGATTTATACAAAGAGAGCAATAAAGAAGAAAAAGAAAGGAGGAACCTATAGGATCAGGAGGCGCATCCAGACATCTCAACTAGGTTGACACTTCCATAGCGTCAATCATCATATCCCGAGAAAGAAAACTTCAACGCTAGTGCTCTTTGAGAAAAGCTTTTATTTAACTGAATGCCAAATAGATTCGAGAAATCTGAATAGATAGGGTTAATGATATTATATGATCAATTTGGTATTACTATTTAATAGTTAACAATGATTCAACGAAACAGCCAACATTCTGATGCATTCTAAAGAAAAATTTTCATTCTGAAACTGGTTCTCCCTAGTTCCGTTTTAATGGAGAGGAAGAAGATAGAAAATTAGAGCCCCTGGTTCTCTGTTTTTTTTTTTCTCCATCAGAGGAAAATAAGTATCATGGGTTGATCTAGTGAAGAAAAAAAAAGTAGGTATAGTCTCATTAATTAGCTAAGTCATGGGTTCAACCAATGATAGCCAACTACCTAGGAATTAATTTCCTGCGAGTTTTCTTAACGCCCAAAACGCTAGCCCAGATACTCTGGATATTAAAAAAAATTGGTTTTATCACGCTCCTAACCGATGTTTTATTGATATATAACACCCAATTTGGTTAACACATTGTATCTAAGGATGATAGTAATGTTACTCGTAATGTACTTTGAATTAGATAGGACAACTATAAATTCAAATTTTCATAACAATGTGGAGCATTCTTCATCAATTGATAGCTTTATATCCTAATCGAACATCTATTCTTGTTTCATTTTCCAGCACTAATGACTCCATATTGGACGAGATGAAGCGGGAATATGCACTTCAACAGGATGGGAAGCCTTGAGAAAGAGTATAACACTACTCAGTGAAAACTGAAGATTAATGTTATGTATCAATCTCAGGTGCACTTTCAGATGATTGTCACTGAAGTATTGATATTAGTAAGACTTGAATGAAAGTTGAGGCTTTTTTTATTTTGTAATCTGGACAAGCAAAAAAATTCTGATTTTTTGGCATAAGAATGACGTTTGATCTCTTCATGTATAAAATTCAGTGCTATTCTTCTACGTCAAAATCATAATCTTTACCCTTTTTGCTGAGTTGTCTTCAAAATAAATTTTGCCGAATGCTAAAATTTCCTTCCATTTGCCATTTAGGATCCTAGTTGTTAGACTAGAGAAAGCCATAATCTGATTTATAGACTTCATCGTCCTTGACTTGCTTGTAGTGTAAAAGAAGATTGGCGAATAATACGAAGTTTAAATTCTGTTATAGACACTAAAGTTAATGTTTATTGTCTTTTG

mRNA sequence

GTTTTGGGTTTTAAGTTTTCAACAAGCTAAATAAATAAAATAATAGGAAACTGGAGAATCGGAATTGAGACTCCGGAGTTGGCTTCGAAGGTCCTACTTCCGACGAAATCAAGGGGATTTGACTGCTAATTCATGGGTTACATTCAGGAAGCTCGGGAAAATCATGTGAAGAAGAAAGTAGAGGAAGCTTTGCGCAGCAAAATGAAGCAGAAAGCGTTGAAGGAGTGCGATCGTTACGCTTCGAAATATGCTGAATGCGCTTATGGCAGAACGTTATCTGTCGTTTTCAAGTGTCGTAATCAAGCAAAAGAATTGAACAATTGTCTCCACTCATACACTAATGACTCCATATTGGACGAGATGAAGCGGGAATATGCACTTCAACAGGATGGGAAGCCTTGAGAAAGAGTATAACACTACTCAGTGAAAACTGAAGATTAATGTTATGTATCAATCTCAGGTGCACTTTCAGATGATTGTCACTGAAGTATTGATATTAGTAAGACTTGAATGAAAGTTGAGGCTTTTTTTATTTTGTAATCTGGACAAGCAAAAAAATTCTGATTTTTTGGCATAAGAATGACGTTTGATCTCTTCATGTATAAAATTCAGTGCTATTCTTCTACGTCAAAATCATAATCTTTACCCTTTTTGCTGAGTTGTCTTCAAAATAAATTTTGCCGAATGCTAAAATTTCCTTCCATTTGCCATTTAGGATCCTAGTTGTTAGACTAGAGAAAGCCATAATCTGATTTATAGACTTCATCGTCCTTGACTTGCTTGTAGTGTAAAAGAAGATTGGCGAATAATACGAAGTTTAAATTCTGTTATAGACACTAAAGTTAATGTTTATTGTCTTTTG

Coding sequence (CDS)

ATGGGTTACATTCAGGAAGCTCGGGAAAATCATGTGAAGAAGAAAGTAGAGGAAGCTTTGCGCAGCAAAATGAAGCAGAAAGCGTTGAAGGAGTGCGATCGTTACGCTTCGAAATATGCTGAATGCGCTTATGGCAGAACGTTATCTGTCGTTTTCAAGTGTCGTAATCAAGCAAAAGAATTGAACAATTGTCTCCACTCATACACTAATGACTCCATATTGGACGAGATGAAGCGGGAATATGCACTTCAACAGGATGGGAAGCCTTGA

Protein sequence

MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILDEMKREYALQQDGKP

Homology

[Close]

BLAST of CsGy5G029440 vs. NCBI nr
Match: XP_004141503.1 (PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis sativus] >KGN52577.1 hypothetical protein Csa_5G644540 [Cucumis sativus])

HSP 1 Score: 180.6 bits (457), Expect = 2.3e-42
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE 60

Query: 61 LNNCLHSYTNDSILDEMKREYALQQDGKP 90
          LNNCLHSYTNDSILDEMKREYALQQDGKP
Sbjct: 61 LNNCLHSYTNDSILDEMKREYALQQDGKP 89

[Close]

BLAST of CsGy5G029440 vs. NCBI nr
Match: XP_008459466.1 (PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis melo])

HSP 1 Score: 173.7 bits (439), Expect = 2.8e-40
Identity = 84/89 (94.38%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKALKECD YASKYAECAYGRTLSV+FKCRNQAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKE 60

Query: 61 LNNCLHSYTNDSILDEMKREYALQQDGKP 90
          LNNCLH YTNDS+LDEMKREYALQ DGKP
Sbjct: 61 LNNCLHLYTNDSVLDEMKREYALQHDGKP 89

[Close]

BLAST of CsGy5G029440 vs. NCBI nr
Match: XP_022993759.1 (uncharacterized protein DDB_G0275933 [Cucurbita maxima])

HSP 1 Score: 171.4 bits (433), Expect = 1.4e-39
Identity = 82/89 (92.13%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKA+KECD YASKYAECAYGRTLSVVFKCRNQAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60

Query: 61 LNNCLHSYTNDSILDEMKREYALQQDGKP 90
          LNNCLH YTND++L+EMKREYALQ DGKP
Sbjct: 61 LNNCLHQYTNDTVLEEMKREYALQHDGKP 89

[Close]

BLAST of CsGy5G029440 vs. NCBI nr
Match: XP_023549716.1 (uncharacterized protein DDB_G0275933 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.5 bits (428), Expect = 5.2e-39
Identity = 81/89 (91.01%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKA+KECD YASKYAECAYGRTLSVVFKCR+QAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRDQAKE 60

Query: 61 LNNCLHSYTNDSILDEMKREYALQQDGKP 90
          LNNCLH YTND++L+EMKREYALQ DGKP
Sbjct: 61 LNNCLHQYTNDTVLEEMKREYALQHDGKP 89

[Close]

BLAST of CsGy5G029440 vs. NCBI nr
Match: XP_022938373.1 (uncharacterized protein DDB_G0275933 [Cucurbita moschata])

HSP 1 Score: 168.7 bits (426), Expect = 8.9e-39
Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKA+KECD YASKYAECAYGRTLSVVFKCRNQAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60

Query: 61 LNNCLHSYTNDSILDEMKREYALQQDGKP 90
          LNNCLH YTND++L+EMKREYA Q DGKP
Sbjct: 61 LNNCLHQYTNDTVLEEMKREYAHQHDGKP 89

[Close]

BLAST of CsGy5G029440 vs. TAIR10
Match: AT5G16060.1 (Cytochrome c oxidase biogenesis protein Cmc1-like)

HSP 1 Score: 132.5 bits (332), Expect = 1.3e-31
Identity = 61/86 (70.93%), Postives = 75/86 (87.21%), Query Frame = 0


Query: 3  YIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKELN 62
          Y+++ARENHVKKKVEEALRSKMK KAL ECD+Y SKYA+CA GRT SVV+ CR QA+ELN
Sbjct: 4  YVEQARENHVKKKVEEALRSKMKAKALMECDQYVSKYAQCATGRTFSVVWTCRKQARELN 63

Query: 63 NCLHSYTNDSILDEMKREYALQQDGK 89
           CLH +TND++L+EMKR Y +Q++GK
Sbjct: 64 TCLHQFTNDNVLEEMKRAYMVQEEGK 89

[Close]

BLAST of CsGy5G029440 vs. Swiss-Prot
Match: sp|Q552P9|Y5933_DICDI (Uncharacterized protein DDB_G0275933 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0275933 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.8e-07
Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 16 VEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKELNNCLHSYTNDSILD 75
          V+  LR K+K ++LKEC  + + +A+C+  + +SVV++CR   + + NCL  YT    L 
Sbjct: 30 VDSYLRQKLKDQSLKECSSHVAAFADCSKDKYISVVWECRELQQLMKNCLVEYTTSERLI 89

Query: 76 EMKREY 82
           MKRE+
Sbjct: 90 GMKREW 95

[Close]

BLAST of CsGy5G029440 vs. TrEMBL
Match: tr|A0A0A0KVX6|A0A0A0KVX6_CUCSA (COX assembly mitochondrial protein OS=Cucumis sativus OX=3659 GN=Csa_5G644540 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-42
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE 60

Query: 61 LNNCLHSYTNDSILDEMKREYALQQDGKP 90
          LNNCLHSYTNDSILDEMKREYALQQDGKP
Sbjct: 61 LNNCLHSYTNDSILDEMKREYALQQDGKP 89

[Close]

BLAST of CsGy5G029440 vs. TrEMBL
Match: tr|A0A1S3CA82|A0A1S3CA82_CUCME (COX assembly mitochondrial protein OS=Cucumis melo OX=3656 GN=LOC103498594 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.8e-40
Identity = 84/89 (94.38%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKALKECD YASKYAECAYGRTLSV+FKCRNQAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKE 60

Query: 61 LNNCLHSYTNDSILDEMKREYALQQDGKP 90
          LNNCLH YTNDS+LDEMKREYALQ DGKP
Sbjct: 61 LNNCLHLYTNDSVLDEMKREYALQHDGKP 89

[Close]

BLAST of CsGy5G029440 vs. TrEMBL
Match: tr|A0A2I4E7U3|A0A2I4E7U3_9ROSI (COX assembly mitochondrial protein OS=Juglans regia OX=51240 GN=LOC108987070 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.0e-35
Identity = 74/88 (84.09%), Postives = 84/88 (95.45%), Query Frame = 0


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGY+QEAR+NHVKKKVEEALRSKMKQKALKECD+YASKYA+CA GRTLSVV++CR QAKE
Sbjct: 1  MGYVQEARDNHVKKKVEEALRSKMKQKALKECDQYASKYAQCAVGRTLSVVWQCRKQAKE 60

Query: 61 LNNCLHSYTNDSILDEMKREYALQQDGK 89
          LN+CLH YTND++L+EMKREY LQQDGK
Sbjct: 61 LNDCLHQYTNDAVLEEMKREYMLQQDGK 88

[Close]

BLAST of CsGy5G029440 vs. TrEMBL
Match: tr|A0A2H5NUY4|A0A2H5NUY4_CITUN (COX assembly mitochondrial protein OS=Citrus unshiu OX=55188 GN=CUMW_078360 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.0e-35
Identity = 74/88 (84.09%), Postives = 82/88 (93.18%), Query Frame = 0


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGY+QEARENHVKKKVEEALRSKMKQKALKECD+Y SKYA+CA GRT SVV+KCR QAKE
Sbjct: 1  MGYVQEARENHVKKKVEEALRSKMKQKALKECDQYTSKYAQCASGRTFSVVWKCREQAKE 60

Query: 61 LNNCLHSYTNDSILDEMKREYALQQDGK 89
          LNNCLH YTND++L+EMK+EY LQQDGK
Sbjct: 61 LNNCLHQYTNDTVLEEMKKEYMLQQDGK 88

[Close]

BLAST of CsGy5G029440 vs. TrEMBL
Match: tr|A0A2C9WJT2|A0A2C9WJT2_MANES (COX assembly mitochondrial protein OS=Manihot esculenta OX=3983 GN=MANES_01G108800 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.8e-35
Identity = 74/88 (84.09%), Postives = 83/88 (94.32%), Query Frame = 0


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKALKECD++ SKYA+CA GRTLSVV++CR QAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDQFTSKYAQCASGRTLSVVWQCRKQAKE 60

Query: 61 LNNCLHSYTNDSILDEMKREYALQQDGK 89
          LNNCLH YTND++L+EMK+EY LQQDGK
Sbjct: 61 LNNCLHQYTNDAVLEEMKKEYMLQQDGK 88

The following BLAST results are available for this feature:

BLAST of CsGy5G029440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141503.1	2.3e-42	100.00	PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis sativus] >KGN52577.1 hy...	[more]
XP_008459466.1	2.8e-40	94.38	PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis melo]	[more]
XP_022993759.1	1.4e-39	92.13	uncharacterized protein DDB_G0275933 [Cucurbita maxima]	[more]
XP_023549716.1	5.2e-39	91.01	uncharacterized protein DDB_G0275933 [Cucurbita pepo subsp. pepo]	[more]
XP_022938373.1	8.9e-39	91.01	uncharacterized protein DDB_G0275933 [Cucurbita moschata]	[more]

BLAST of CsGy5G029440 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16060.1	1.3e-31	70.93	Cytochrome c oxidase biogenesis protein Cmc1-like	[more]

BLAST of CsGy5G029440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q552P9\|Y5933_DICDI	2.8e-07	39.39	Uncharacterized protein DDB_G0275933 OS=Dictyostelium discoideum OX=44689 GN=DDB...	[more]

BLAST of CsGy5G029440 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KVX6\|A0A0A0KVX6_CUCSA	1.5e-42	100.00	COX assembly mitochondrial protein OS=Cucumis sativus OX=3659 GN=Csa_5G644540 PE...	[more]
tr\|A0A1S3CA82\|A0A1S3CA82_CUCME	1.8e-40	94.38	COX assembly mitochondrial protein OS=Cucumis melo OX=3656 GN=LOC103498594 PE=3 ...	[more]
tr\|A0A2I4E7U3\|A0A2I4E7U3_9ROSI	3.0e-35	84.09	COX assembly mitochondrial protein OS=Juglans regia OX=51240 GN=LOC108987070 PE=...	[more]
tr\|A0A2H5NUY4\|A0A2H5NUY4_CITUN	3.0e-35	84.09	COX assembly mitochondrial protein OS=Citrus unshiu OX=55188 GN=CUMW_078360 PE=3...	[more]
tr\|A0A2C9WJT2\|A0A2C9WJT2_MANES	6.8e-35	84.09	COX assembly mitochondrial protein OS=Manihot esculenta OX=3983 GN=MANES_01G1088...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013892	Cyt_c_biogenesis_Cmc1-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G029440.1	CsGy5G029440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013892	Cytochrome c oxidase biogenesis protein Cmc1-like	PFAM	PF08583	Cmc1	coord: 20..81 e-value: 2.1E-16 score: 59.6
IPR013892	Cytochrome c oxidase biogenesis protein Cmc1-like	PANTHER	PTHR22977	COX ASSEMBLY MITOCHONDRIAL PROTEIN	coord: 4..85
None	No IPR available	PANTHER	PTHR22977:SF5	COX ASSEMBLY MITOCHONDRIAL PROTEIN HOMOLOG	coord: 4..85

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G029440	Csa5G644540	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G029440	MELO3C022093	Melon (DHL92) v3.5.1	cgybmeB299
CsGy5G029440	ClCG11G005400	Watermelon (Charleston Gray)	cgybwcgB328
CsGy5G029440	CSPI05G30060	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G029440	CmaCh15G001860	Cucurbita maxima (Rimu)	cgybcmaB609
CsGy5G029440	CmoCh15G001990	Cucurbita moschata (Rifu)	cgybcmoB584
CsGy5G029440	CmoCh04G029850	Cucurbita moschata (Rifu)	cgybcmoB664
CsGy5G029440	Lsi03G002360	Bottle gourd (USVL1VR-Ls)	cgyblsiB325
CsGy5G029440	Cp4.1LG13g07750	Cucurbita pepo (Zucchini)	cgybcpeB598
CsGy5G029440	Cp4.1LG01g22030	Cucurbita pepo (Zucchini)	cgybcpeB660
CsGy5G029440	MELO3C022093.2	Melon (DHL92) v3.6.1	cgybmedB299
CsGy5G029440	CsaV3_5G039180	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G029440	Cla97C11G212360	Watermelon (97103) v2	cgybwmbB341
CsGy5G029440	Bhi06G000090	Wax gourd	cgybwgoB439
CsGy5G029440	Carg05933	Silver-seed gourd	carcgybB0022
CsGy5G029440	Carg02177	Silver-seed gourd	carcgybB0280

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G029440	Cucurbita pepo (Zucchini)	cgybcpeB625
CsGy5G029440	Melon (DHL92) v3.5.1	cgybmeB297
CsGy5G029440	Watermelon (97103) v1	cgybwmB409
CsGy5G029440	Silver-seed gourd	carcgybB0021
CsGy5G029440	Cucurbita maxima (Rimu)	cgybcmaB647
CsGy5G029440	Cucurbita maxima (Rimu)	cgybcmaB686
CsGy5G029440	Cucurbita moschata (Rifu)	cgybcmoB625