CmaCh15G001860 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G001860
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Cytochrome c oxidase biogenesis protein Cmc1-like
Location	Cma_Chr15 : 899087 .. 901976 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGGAAGTTAAAATTGGGGAGTGGAATTGACACCGCCGGAGTTGGCTTCGAACGTCCTGCTTTCAACGAAACCAAGGGCATTCGACGGCTACTTCCTGTTCTCCTACTGTTCTCTGAAATGGGTTACATTCAGGAAGCTCGAGAGAATCATGTGAAGAAGAAAGTAGAGGAAGGTATTATCAAATGCTCTTATCGTCCTTTTTGTCCTTAATCTGCTTTTGATTGTTGACGAAAATGATGGGTCAATTTAATTTTTGAGTCTAGAAAACTTATCGAAATATGCTGCTGATGGTTATTTCTCCATTTCCAGCTTTGCGCAGCAAAATGAAGCAGAAGGCGATGAAGGAATGCGACCATTACGCTTCGAAATATGCTGAATGCGCCTACGGCAGAACGTTATCCGTCGTTTTCAAGTGTCGCAATCAAGCTAAAGAATTGAACAATTGCCTTCACCAATAGTGAGTCTCTGATTGTTTTGTTTGGCTTATCTTCTGTAGATCACAATGTGCTTTATCGTTGTTCCTCGTGCATCAATCATCCTATTTAGTTGAATTGATAAGATACACCATTTCCCTTTTAATTGAGGGTTTCAGTGATAGTAGCTTTAGATGCTGGGTTTGATTTGTGGAAAATCAAGCATGGATCGAGTTTTGAGTTTAGAGACATGTTAGTGACACATGAAAGTAAGTCAAGAGCTGGAGTCATATGGCCAAACATGCGACTTGACTTCTATGGGGATGAATAACTACATAGTGCTGATGTAACTCCACCGCCATCAGATATTGTCCTCGTCGGGCTTTTCTTTTTAGGCTTACCCTCAAGGTTTTTAAAACGTGTCTGCTAGGGAGAAGTTTCCACACTCTTATAAAGAATGCTTCGTTCCCTCTCTCCAACCAACGTGGGATCTCACAAATTACCACTTACCACTTTTCATGTTTATAGATGTAATTAAGGATTTTCCCTAGAATGCATTCTCAGTGGGGACGGGCATGTTCATCATCTACATGCCTTGAGTCACCTATGGAGCGTATTATGGCACAGGAGTCACCATTAAGTGACGTTTAACACAAACATTAAAACAAATCTTAGCCTACCAGAGAAACAAGATTCATCTTGGGTGTTATGACTTATAGAGTGAGCCACGGTATGGTGCAATGCAATGCCTCTTCCTTGTTCAGGTTGTTAGTTATCTCTGCCGCATCGTTGTTGAACTATATGTAGTTTTGTTGCTAGAAGGTTAGTTGGCCTGTTATTTCTCTCGGACTTCTATTTAATGAACCCTGTAATACCTTTGTAAACACTGAATATTGTCGATTCTGATCAAGAATTGGTTTAGTTCTTGAGTAGAGGCAAGGTGAAAACTCTAAGCCCGAGGCGGCTATTGGTGCATAGATTGAAAAAGAGTGCATGAACATACAACGTGCATGATCAATGGTTTGTTGGGAGAATGAGCTTTTAGGCTAAGCCACCTATGGGCAAGAAGGTGCTTATTGAGTAGCTTGAGTGAATGCAACCAAGTGGACTCGGCATCAAAAGGAAGAACCCAGCATTGACTTTAAGGGTGTGAGAGGATCTTGAATAGAGTATTGAGGCAGGAGTGACGGCAGGTAATGAGTCAGAGTAGTATCTAGGACTACACGATTTAAGGTGGTCTGATCAATATTGGCGATTTGCTTAGAGGATTCATACCCTATTATAAAAAATGCTGATCATTAGTGAGAAGAAAAACAAGAGACTCCGCTCTCTCCACAATATTCTTAAAGACCTCTCTCGTCAGGTGGCTATCAACCCTATTTATCAATAAATGATATAGGATTGAAATAAATAAACTCCTCTCGAAGAAGATTGTAATAAGATTCAAATAGGAAAAGGGGAGAAGGCTAAGTAAGCTACGCCCTCTTAACTCTCTCTCTATAGAAAAAAAGTCCGCAAGCGAGGGAGAAAGGAATGTTGCTCACTCGAGAAATACAAGCGTTAAACCTGCAAACGATACCATTCTTCTAGGCGAAGCCTCCTTCAGTTAAAAATGTCAGATGCTGAAAGGTAATCCTTGATCATTTTAGCTGCAAGAAAATTTTTCATTTTGAAACTCATCTTGCCAGGGAGATTAACGGGGGAGGGGGTGAATGTATATATACACAGGTGTTAACAAAATCAACATCATTGATTTTCTTAGAACTATTTGCCGTTTTATATAGGAGCTTCATTCTCTTGTAAATTCTCTTCGTTCCTTCCTAATGGCAAATATTATTAGTCAAAAACGGTAGTAAATCTAAAGAACGATGCATAGATTGTCTAAGAATAATTAAATATATCTGTTCTCGTTTTGTTTTCCAGCACCAACGACACCGTGTTGGAAGAGATGAAGCGGGAATATGCACTTCAACATGATGGGAAGCCGTGAGGAAAAGTATCAACATCATTCAATGAGAAAACTGAAGAGTACTGTTATGGGTCAATCTCAGGTGCACTTTCAGACGATACTATGTTGAATTTGTCACTTGAAGTATTGATATTAGTAAGAACATAATGAAAGTTGAGGCTTTATGGATTTTGTGATCTGGATAAGCAAAGGAATTCTATTTTATTTGGATAAGAATGATCTTTCATCTCTCCTTCATAGTGTAAACTTCAAAGCTATTCTTCTTTGTCAAAAATCTTTACCAGGAATGAGTTCCATCTGCCATTAAGGCTCCTCATTGATAGATTGAAGGGAGCCATTTCTGATTTATGGATTCCATCCTTCTTGCCTTGCTTGGAGTGTAAAAAGGGATGAGCAATAAATCATGAAGTTCAAGATTTTATTATTGTTTTAGTCTCCAAATTTATTATTATTTGACCTTATGTTTTTTATTGTAAATTTTTTCATTATCAATTTCCAGAAATC

mRNA sequence

AAAAAGGAAGTTAAAATTGGGGAGTGGAATTGACACCGCCGGAGTTGGCTTCGAACGTCCTGCTTTCAACGAAACCAAGGGCATTCGACGGCTACTTCCTGTTCTCCTACTGTTCTCTGAAATGGGTTACATTCAGGAAGCTCGAGAGAATCATGTGAAGAAGAAAGTAGAGGAAGCTTTGCGCAGCAAAATGAAGCAGAAGGCGATGAAGGAATGCGACCATTACGCTTCGAAATATGCTGAATGCGCCTACGGCAGAACGTTATCCGTCGTTTTCAAGTGTCGCAATCAAGCTAAAGAATTGAACAATTGCCTTCACCAATACACCAACGACACCGTGTTGGAAGAGATGAAGCGGGAATATGCACTTCAACATGATGGGAAGCCGTGAGGAAAAGTATCAACATCATTCAATGAGAAAACTGAAGAGTACTGTTATGGGTCAATCTCAGGTGCACTTTCAGACGATACTATGTTGAATTTGTCACTTGAAGTATTGATATTAGTAAGAACATAATGAAAGTTGAGGCTTTATGGATTTTGTGATCTGGATAAGCAAAGGAATTCTATTTTATTTGGATAAGAATGATCTTTCATCTCTCCTTCATAGTGTAAACTTCAAAGCTATTCTTCTTTGTCAAAAATCTTTACCAGGAATGAGTTCCATCTGCCATTAAGGCTCCTCATTGATAGATTGAAGGGAGCCATTTCTGATTTATGGATTCCATCCTTCTTGCCTTGCTTGGAGTGTAAAAAGGGATGAGCAATAAATCATGAAGTTCAAGATTTTATTATTGTTTTAGTCTCCAAATTTATTATTATTTGACCTTATGTTTTTTATTGTAAATTTTTTCATTATCAATTTCCAGAAATC

Coding sequence (CDS)

ATGGGTTACATTCAGGAAGCTCGAGAGAATCATGTGAAGAAGAAAGTAGAGGAAGCTTTGCGCAGCAAAATGAAGCAGAAGGCGATGAAGGAATGCGACCATTACGCTTCGAAATATGCTGAATGCGCCTACGGCAGAACGTTATCCGTCGTTTTCAAGTGTCGCAATCAAGCTAAAGAATTGAACAATTGCCTTCACCAATACACCAACGACACCGTGTTGGAAGAGATGAAGCGGGAATATGCACTTCAACATGATGGGAAGCCGTGA

Protein sequence

MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLEEMKREYALQHDGKP

Homology

[Close]

BLAST of CmaCh15G001860 vs. Swiss-Prot
Match: Y5933_DICDI (Uncharacterized protein DDB_G0275933 OS=Dictyostelium discoideum GN=DDB_G0275933 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.6e-07
Identity = 25/66 (37.88%), Postives = 43/66 (65.15%), Query Frame = 1


Query: 16 VEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLE 75
          V+  LR K+K +++KEC  + + +A+C+  + +SVV++CR   + + NCL +YT    L 
Sbjct: 30 VDSYLRQKLKDQSLKECSSHVAAFADCSKDKYISVVWECRELQQLMKNCLVEYTTSERLI 89

Query: 76 EMKREY 82
           MKRE+
Sbjct: 90 GMKREW 95

[Close]

BLAST of CmaCh15G001860 vs. TrEMBL
Match: A0A0A0KVX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G644540 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.9e-40
Identity = 82/89 (92.13%), Postives = 86/89 (96.63%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKA+KECD YASKYAECAYGRTLSVVFKCRNQAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYALQHDGKP 90
          LNNCLH YTND++L+EMKREYALQ DGKP
Sbjct: 61 LNNCLHSYTNDSILDEMKREYALQQDGKP 89

[Close]

BLAST of CmaCh15G001860 vs. TrEMBL
Match: W9RUZ3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008660 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.8e-35
Identity = 75/88 (85.23%), Postives = 81/88 (92.05%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYA KYAECA GRT+SVV++CR QAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYALKYAECATGRTISVVWQCRQQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYALQHDGK 89
          LNNCLHQ+TND VLE+MKREY LQ D K
Sbjct: 61 LNNCLHQHTNDAVLEKMKREYTLQQDAK 88

[Close]

BLAST of CmaCh15G001860 vs. TrEMBL
Match: A0A059AE81_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01478 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 8.2e-35
Identity = 74/88 (84.09%), Postives = 81/88 (92.05%), Query Frame = 1


Query: 1   MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
           MGY+QEARENHVKKKVEEALRSKMKQKA+KECD+YASKYAECA GRT SVV++CR QAKE
Sbjct: 39  MGYVQEARENHVKKKVEEALRSKMKQKALKECDYYASKYAECAVGRTFSVVWQCRKQAKE 98

Query: 61  LNNCLHQYTNDTVLEEMKREYALQHDGK 89
           LN+CLH YTND VLEEMKREYAL  +GK
Sbjct: 99  LNDCLHHYTNDAVLEEMKREYALNQEGK 126

[Close]

BLAST of CmaCh15G001860 vs. TrEMBL
Match: V4T3B3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013207mg PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.1e-34
Identity = 74/88 (84.09%), Postives = 79/88 (89.77%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGY+QEARENHVKKKVEEALRSKMK KA+KECD Y SKYA+CA GRT SVV+KCR QAKE
Sbjct: 1  MGYVQEARENHVKKKVEEALRSKMKAKALKECDQYTSKYAQCASGRTFSVVWKCREQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYALQHDGK 89
          LNNCLHQYTND VLEEMK+EY LQ DGK
Sbjct: 61 LNNCLHQYTNDAVLEEMKKEYMLQQDGK 88

[Close]

BLAST of CmaCh15G001860 vs. TrEMBL
Match: A0A061EPI3_THECC (Cytochrome c oxidase biogenesis protein Cmc1-like OS=Theobroma cacao GN=TCM_019491 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.4e-34
Identity = 72/88 (81.82%), Postives = 81/88 (92.05%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGY+QEARENHVKKKVEEALRSKMKQKA+KECDHY SKYA+CA GRT+S+V++CR QAKE
Sbjct: 1  MGYVQEARENHVKKKVEEALRSKMKQKALKECDHYTSKYAQCAAGRTISIVWQCRKQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYALQHDGK 89
          LN+CLHQYTND VLEEMKREY LQ + K
Sbjct: 61 LNDCLHQYTNDAVLEEMKREYTLQENEK 88

[Close]

BLAST of CmaCh15G001860 vs. TAIR10
Match: AT5G16060.1 (AT5G16060.1 Cytochrome c oxidase biogenesis protein Cmc1-like)

HSP 1 Score: 133.7 bits (335), Expect = 5.8e-32
Identity = 63/86 (73.26%), Postives = 73/86 (84.88%), Query Frame = 1


Query: 3  YIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELN 62
          Y+++ARENHVKKKVEEALRSKMK KA+ ECD Y SKYA+CA GRT SVV+ CR QA+ELN
Sbjct: 4  YVEQARENHVKKKVEEALRSKMKAKALMECDQYVSKYAQCATGRTFSVVWTCRKQARELN 63

Query: 63 NCLHQYTNDTVLEEMKREYALQHDGK 89
           CLHQ+TND VLEEMKR Y +Q +GK
Sbjct: 64 TCLHQFTNDNVLEEMKRAYMVQEEGK 89

[Close]

BLAST of CmaCh15G001860 vs. NCBI nr
Match: gi|659119082|ref|XP_008459466.1| (PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 1.7e-41
Identity = 84/89 (94.38%), Postives = 88/89 (98.88%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYGRTLSV+FKCRNQAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYALQHDGKP 90
          LNNCLH YTND+VL+EMKREYALQHDGKP
Sbjct: 61 LNNCLHLYTNDSVLDEMKREYALQHDGKP 89

[Close]

BLAST of CmaCh15G001860 vs. NCBI nr
Match: gi|449447494|ref|XP_004141503.1| (PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 7.1e-40
Identity = 82/89 (92.13%), Postives = 86/89 (96.63%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKA+KECD YASKYAECAYGRTLSVVFKCRNQAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYALQHDGKP 90
          LNNCLH YTND++L+EMKREYALQ DGKP
Sbjct: 61 LNNCLHSYTNDSILDEMKREYALQQDGKP 89

[Close]

BLAST of CmaCh15G001860 vs. NCBI nr
Match: gi|1009127189|ref|XP_015880562.1| (PREDICTED: uncharacterized protein DDB_G0275933 [Ziziphus jujuba])

HSP 1 Score: 158.7 bits (400), Expect = 4.8e-36
Identity = 77/88 (87.50%), Postives = 82/88 (93.18%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGY+QEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECA GRTLSVV+KCR QAKE
Sbjct: 1  MGYVQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECATGRTLSVVWKCRTQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYALQHDGK 89
          LN+CLHQYTND VLEEMK+ Y LQ DGK
Sbjct: 61 LNHCLHQYTNDAVLEEMKKVYMLQQDGK 88

[Close]

BLAST of CmaCh15G001860 vs. NCBI nr
Match: gi|568857432|ref|XP_006482270.1| (PREDICTED: uncharacterized protein DDB_G0275933 [Citrus sinensis])

HSP 1 Score: 156.0 bits (393), Expect = 3.1e-35
Identity = 75/88 (85.23%), Postives = 80/88 (90.91%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGY+QEARENHVKKKVEEALRSKMKQKA+KECD Y SKYA+CA GRT SVV+KCR QAKE
Sbjct: 1  MGYVQEARENHVKKKVEEALRSKMKQKALKECDQYTSKYAQCASGRTFSVVWKCREQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYALQHDGK 89
          LNNCLHQYTND VLEEMK+EY LQ DGK
Sbjct: 61 LNNCLHQYTNDAVLEEMKKEYMLQQDGK 88

[Close]

BLAST of CmaCh15G001860 vs. NCBI nr
Match: gi|703127348|ref|XP_010103808.1| (hypothetical protein L484_008660 [Morus notabilis])

HSP 1 Score: 154.8 bits (390), Expect = 6.9e-35
Identity = 75/88 (85.23%), Postives = 81/88 (92.05%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYA KYAECA GRT+SVV++CR QAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYALKYAECATGRTISVVWQCRQQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYALQHDGK 89
          LNNCLHQ+TND VLE+MKREY LQ D K
Sbjct: 61 LNNCLHQHTNDAVLEKMKREYTLQQDAK 88

The following BLAST results are available for this feature:

BLAST of CmaCh15G001860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5933_DICDI	3.6e-07	37.88	Uncharacterized protein DDB_G0275933 OS=Dictyostelium discoideum GN=DDB_G0275933...	[more]

BLAST of CmaCh15G001860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVX6_CUCSA	4.9e-40	92.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G644540 PE=4 SV=1	[more]
W9RUZ3_9ROSA	4.8e-35	85.23	Uncharacterized protein OS=Morus notabilis GN=L484_008660 PE=4 SV=1	[more]
A0A059AE81_EUCGR	8.2e-35	84.09	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01478 PE=4 SV=1	[more]
V4T3B3_9ROSI	1.1e-34	84.09	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013207mg PE=4 SV=1	[more]
A0A061EPI3_THECC	2.4e-34	81.82	Cytochrome c oxidase biogenesis protein Cmc1-like OS=Theobroma cacao GN=TCM_0194...	[more]

BLAST of CmaCh15G001860 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16060.1	5.8e-32	73.26	Cytochrome c oxidase biogenesis protein Cmc1-like	[more]

BLAST of CmaCh15G001860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119082\|ref\|XP_008459466.1\|	1.7e-41	94.38	PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis melo]	[more]
gi\|449447494\|ref\|XP_004141503.1\|	7.1e-40	92.13	PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis sativus]	[more]
gi\|1009127189\|ref\|XP_015880562.1\|	4.8e-36	87.50	PREDICTED: uncharacterized protein DDB_G0275933 [Ziziphus jujuba]	[more]
gi\|568857432\|ref\|XP_006482270.1\|	3.1e-35	85.23	PREDICTED: uncharacterized protein DDB_G0275933 [Citrus sinensis]	[more]
gi\|703127348\|ref\|XP_010103808.1\|	6.9e-35	85.23	hypothetical protein L484_008660 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013892	Cyt_c_biogenesis_Cmc1-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G001860.1	CmaCh15G001860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013892	Cytochrome c oxidase biogenesis protein Cmc1-like	PFAM	PF08583	Cmc1	coord: 20..81 score: 3.8
None	No IPR available	PANTHER	PTHR22977	UPF0287 FAMILY	coord: 1..84 score: 9.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G001860	Cucsa.238070	Cucumber (Gy14) v1	cgycmaB0660
CmaCh15G001860	Csa5G644540	Cucumber (Chinese Long) v2	cmacuB299
CmaCh15G001860	MELO3C022093	Melon (DHL92) v3.5.1	cmameB251
CmaCh15G001860	ClCG11G005400	Watermelon (Charleston Gray)	cmawcgB252
CmaCh15G001860	CSPI05G30060	Wild cucumber (PI 183967)	cmacpiB304
CmaCh15G001860	CmoCh04G029850	Cucurbita moschata (Rifu)	cmacmoB303
CmaCh15G001860	CmoCh15G001990	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G001860	Lsi03G002360	Bottle gourd (USVL1VR-Ls)	cmalsiB276
CmaCh15G001860	Cp4.1LG13g07750	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G001860	Cp4.1LG01g22030	Cucurbita pepo (Zucchini)	cmacpeB311
CmaCh15G001860	MELO3C022093.2	Melon (DHL92) v3.6.1	cmamedB285
CmaCh15G001860	CsaV3_5G039180	Cucumber (Chinese Long) v3	cmacucB0353
CmaCh15G001860	Cla97C11G212360	Watermelon (97103) v2	cmawmbB296
CmaCh15G001860	Bhi06G000090	Wax gourd	cmawgoB0384
CmaCh15G001860	CsGy5G029440	Cucumber (Gy14) v2	cgybcmaB609
CmaCh15G001860	Carg02177	Silver-seed gourd	carcmaB0362
CmaCh15G001860	Carg05933	Silver-seed gourd	carcmaB0029

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G001860	Silver-seed gourd	carcmaB0030
CmaCh15G001860	Wax gourd	cmawgoB0380
CmaCh15G001860	Wax gourd	cmawgoB0397
CmaCh15G001860	Cucurbita maxima (Rimu)	cmacmaB317
CmaCh15G001860	Cucurbita maxima (Rimu)	cmacmaB324
CmaCh15G001860	Cucurbita moschata (Rifu)	cmacmoB308
CmaCh15G001860	Melon (DHL92) v3.5.1	cmameB272
CmaCh15G001860	Watermelon (97103) v1	cmawmB284
CmaCh15G001860	Cucurbita pepo (Zucchini)	cmacpeB317