ClCG11G005400 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGGAAGCGGAATTGAGACTCGGAGTTAGCTTCGAACGTCCTACTTCCAACGAAACCAAGGGGATCTGACCGCTAATTCCTAGCTCCTATTGCTTTGTGAAATGGGTTACATACAGGAAGCTCGAGAGAATCATGTGAAGAAGAAAGTAGAGGAAGGTATTATAAAATGTTCATCTCATCCTCTACATCTTTAATCTGCTTTTGATTGCTGATGGGTCAATTTAAATTTTGAGTCTAGTACATCTGCAAGTGGTGTAGAAAACTTTTGGAAATCTGGTGATGGTTTTTTTTTTTTTGTCCATTTCCAGCTTTGCGCAGCAAAATGAAGCAGAAAGCGTTGAAGGAGTGCGATCATTACGCTTCGAAATATGCTGAATGCGCCTACGGCAGAACGTTATCCGTCGTTTTCAAGTGTCGTAATCAAGCTAAAGAATTGAACAATTGCCTTCACCTATAGTGAGTCTCTGCTTGTTTCGTTTAGCTTTTTAATGGGTATGTTCAATTTCAGCTGCGTTTTATTCAAATTGTTCGGCTTCTCTTCTGTTCATATTAGTGTGCATTATCATTGTTCCTCAAGCACCAATGATCATGTTTAGTCTAATTGATAAACATACACTGGTTGTGTTGCTTGTTAATTGAGCGTTTCAGTGGTAATAACCTTGGGTGCTGGGTGTGATTTGTGAAAAATCAATCAGTATTTCCTCTTTTTGTGACTACAATCTTGCTTCTCTTATCTCACAGTAGAATAGCATTATCTAATCCCTCATGGCACTAGTTGCCCTTTTGTATTTCATACCATCGACGAAATTCTCACTAAACGTTTATCATTAGAAAAAAGAAAAAGAAAAAGAAAAAGAAATGTGATTTGTGAAAAATCTAGCATGGATCGTAATTTTGAAGGATCGAGTGTTTAGAGACATGTTGGTGGCACATGAAAGTAAGTCAAGAGCTAAAAAAAATTTATAATTCAAGGAAGATTCAACCCAAACAATGAGGAAATTGCTCTAATACCAGAACACGTGTTGAATAAACAGAGTTCTCTTATTCATATCAGGAGGAAACTCCACTTAATTAAATACAAATACAAATACAAATGTCCTATATATAGCAGAACAAAAGGGAACAAACTAAGCAACTGAATAACAAGAAACTAACAGAATAATAACAGCTGTACAATTAGTTTACAAGTCCCTTAATACTGGAGTCATATGGCCCAACATGTGACTCTTATGGGGATGAATAACTACTTAGTTCTTACCACTTTCCTTGTTCATATATATTAAAAAGGATTTTTCTTGGAATGTATTTTGAGTGGGGGCGGTGAGGTGGCTCTTCATCGCCTACAGGCCATGAGTCATCTATGGAATGTATTATGGCATGGGCGAGTCAGCATTAAGTGACTTTTGTCGGTAGCAAAAAAACTTTTAGCAGATGTCAATTGGCATGTACTGTGCTTCTTCCTATGGACTAGAAGTTTCAGTAGAGGCTATAGCCCTGAAACAAATATCTATGGCTCAACACAAGCGTTAAGTGATGCTATACCACAAGATGGATGTTCAAGCAGGCCTTTACAAAAATGTAAGGGCTCATTGTTTGGTTATAAATATATGCCACAACCAAATGGCAGCGCTTATAGATGCCTCCATGTCATGATCTAGGTGGGGCAGTCATCTGCGGCAATTATCAACTAGCAAAATTAAAACAAATCTTGGCCTACCAGAGAAACAAGAGTCATCTTGGGTGTTATAATTTATAGAGTGCCCCAGGCAGTGGTGCATCTAGGATGCAATGGCCATGTCCTTGTTAAGATTGTGTTAGTTATCTCTGCTGTATTGTTGTTGAAGTATATTTAGCCTTATTGTTAGAAGGTTAGTTGGGCTGTTATTTCTCTTGGGCATCTATTTAGAGAACCCTGTATTGCTTTTGTCGATACTGATCAAGAATCAGCTCAGTTCTTGAGTAGAGGCAAGATGAAAACCCTAAACCCAAGCTGGCTATTGGTGCATAGAGTAAAAAAGAATGCATGTACATACAACGTGCATGAGCAAGAGTCTGCTGGGAGAATGAGCTTTAGGTTAAGCCAACTATGGGCAAGAAGGTGCTCATTTGAGTAGCTTGAGTGAGTGCGACCAAGTGGACTCGGTATCAAAAGGAAGAACCCAGCATTGACTTTAACGGATGTAAGGATCTTGAATACAGTTTTGAGGCAGGAGTTGCGGCAGGTAATGATTCAGAGTAGTAGTACCTGTGCCACACGATCTAAGATGGTCTGATCAATATTGGTGATTTGATTGGAGAATTCATACCCCATTACAAAGAACCAAACGCTAGTGCTCTAGGGCTCAGGACTCGGATGTGTGGGCAGGAAAGACAAAAGACAGCAACCAACTGATGTTCTTTGTGAGAAGCTATTTGTCTAACTGAATGCCAAATAGCTTCGAGAAATCTTAATAGTTAGGGTTAAGGATATTATATGATCAGTTTTATATTACTATTGAATAGTGAACAACATTTTGTTGAATCGACACTTTGCCAACGGCGATACAATCTAAAGAAAAATTTTCATTCTGAAAATGGTTTTGCCTGGTTCCATTTTAATGGAGAGGAAGAAGATAAAAAAATTAGAGCTCCCTCTCTTTTGGGTGTGGAGGTGCTGGAGAGGGTTAGAGCCTTGTTGCACCACAAGGCACTATCAACGAGTGGGAGGGGGTAGGCGGGATGGGGGAGGGTGATAGTCTAAGAAATGGTTGACAAAAAGCAGCGTGCATCTCCAATTTAACTTGTGAGCAAATATTTAGTCTTCGCATAATATTCCTCAGTTAAGTTTTAGTTTTGGTCCTCTATTGCTTCCCCATGAGAGGGAAGAAGTTTTGTCATGCTCCTTACCATAGTTTTATTGAAATATAACACCCAATTGAGTTACCTAACAATCTAAGGATAGTAATGTTACTCATATTGGGCTTCATATAGGACAAGTATAAATTCAATTTTTCGTAACAATGCAAACATCACCATCAATCGAGAGCTTATATATCCTTACCCTAATTGTTCCTGTTTTGTTTTCCAGCACTAACGACTCCGTGTTGGAAGAGATGAAGCGGGAATATGCACTCCAACACGATGGGAAGCCGTGAGAAAGAGTATAACATCATTTAATGAGAAAACTGAAGAGTATTGTTATGTGTCGATCTCAGGTGCAGTTTCAGATGATGCTGTGTTGAATTTGTCACTTACATTAGTCAGAACTGAATGAAAGTTGAGGCTTTTTGCATTTTGTGATCTGAACAAGCAAAGGAACTCCGCTTTTTTGGCATAAGAATGATCTTTGATCTCTTCATGTATAAATTTCAGAGCTATTCTTCGTCAAATCTATAATCTTTTACCCCTTTGGCATCTTTACTAGGATTGAGTTGTCCTCGAGAATATAATTCCATGATCTTATTTATGGCCTTCATCGTTCTTGTCTTGCTCGGAGTTTAAAAAGTTCAGCGAATAGCATAAAGTTGTAATTCCATTAGACCTGTTATTCTAATGTAAAATTTTCAATCTCAG TGGGAAGCGGAATTGAGACTCGGAGTTAGCTTCGAACGTCCTACTTCCAACGAAACCAAGGGGATCTGACCGCTAATTCCTAGCTCCTATTGCTTTGTGAAATGGGTTACATACAGGAAGCTCGAGAGAATCATGTGAAGAAGAAAGTAGAGGAAGCTTTGCGCAGCAAAATGAAGCAGAAAGCGTTGAAGGAGTGCGATCATTACGCTTCGAAATATGCTGAATGCGCCTACGGCAGAACGTTATCCGTCGTTTTCAAGTGTCGTAATCAAGCTAAAGAATTGAACAATTGCCTTCACCTATAAGAACCCTGTATTGCTTTTGTCGATACTGATCAAGAATCAGCTCAGTTCTTGAGTAGAGGCAAGATGAAAACCCTAAACCCAAGCTGGCTATTGGTGCATAGAGTAAAAAAGAATGCATGTACATACAACGTGCATGAGCAAGAGTCTGCTGGGAGAATGAGCTTTAGGTTAAGCCAACTATGGGCAAGAAGCACTAACGACTCCGTGTTGGAAGAGATGAAGCGGGAATATGCACTCCAACACGATGGGAAGCCGTGAGAAAGAGTATAACATCATTTAATGAGAAAACTGAAGAGTATTGTTATGTGTCGATCTCAGGTGCAGTTTCAGATGATGCTGTGTTGAATTTGTCACTTACATTAGTCAGAACTGAATGAAAGTTGAGGCTTTTTGCATTTTGTGATCTGAACAAGCAAAGGAACTCCGCTTTTTTGGCATAAGAATGATCTTTGATCTCTTCATGTATAAATTTCAGAGCTATTCTTCGTCAAATCTATAATCTTTTACCCCTTTGGCATCTTTACTAGGATTGAGTTGTCCTCGAGAATATAATTCCATGATCTTATTTATGGCCTTCATCGTTCTTGTCTTGCTCGGAGTTTAAAAAGTTCAGCGAATAGCATAAAGTTGTAATTCCATTAGACCTGTTATTCTAATGTAAAATTTTCAATCTCAG ATGGGTTACATACAGGAAGCTCGAGAGAATCATGTGAAGAAGAAAGTAGAGGAAGCTTTGCGCAGCAAAATGAAGCAGAAAGCGTTGAAGGAGTGCGATCATTACGCTTCGAAATATGCTGAATGCGCCTACGGCAGAACGTTATCCGTCGTTTTCAAGTGTCGTAATCAAGCTAAAGAATTGAACAATTGCCTTCACCTATAA MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHL
BLAST of ClCG11G005400 vs. TrEMBL
Match: A0A0A0KVX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G644540 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 1.0e-29 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 1
BLAST of ClCG11G005400 vs. TrEMBL
Match: A0A0J8D2W2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g026620 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 2.1e-27 Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = 1
BLAST of ClCG11G005400 vs. TrEMBL
Match: W9RUZ3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008660 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 6.2e-27 Identity = 60/66 (90.91%), Postives = 63/66 (95.45%), Query Frame = 1
BLAST of ClCG11G005400 vs. TrEMBL
Match: A0A059AE81_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01478 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 4.0e-26 Identity = 58/66 (87.88%), Postives = 63/66 (95.45%), Query Frame = 1
BLAST of ClCG11G005400 vs. TrEMBL
Match: A0A061EPI3_THECC (Cytochrome c oxidase biogenesis protein Cmc1-like OS=Theobroma cacao GN=TCM_019491 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 5.2e-26 Identity = 56/66 (84.85%), Postives = 63/66 (95.45%), Query Frame = 1
BLAST of ClCG11G005400 vs. TAIR10
Match: AT5G16060.1 (AT5G16060.1 Cytochrome c oxidase biogenesis protein Cmc1-like) HSP 1 Score: 107.5 bits (267), Expect = 3.3e-24 Identity = 49/64 (76.56%), Postives = 53/64 (82.81%), Query Frame = 1
BLAST of ClCG11G005400 vs. NCBI nr
Match: gi|659119082|ref|XP_008459466.1| (PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis melo]) HSP 1 Score: 141.0 bits (354), Expect = 7.7e-31 Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 1
BLAST of ClCG11G005400 vs. NCBI nr
Match: gi|449447494|ref|XP_004141503.1| (PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis sativus]) HSP 1 Score: 136.7 bits (343), Expect = 1.5e-29 Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 1
BLAST of ClCG11G005400 vs. NCBI nr
Match: gi|1009127189|ref|XP_015880562.1| (PREDICTED: uncharacterized protein DDB_G0275933 [Ziziphus jujuba]) HSP 1 Score: 129.8 bits (325), Expect = 1.8e-27 Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = 1
BLAST of ClCG11G005400 vs. NCBI nr
Match: gi|731315741|ref|XP_010692765.1| (PREDICTED: uncharacterized protein DDB_G0275933 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 129.0 bits (323), Expect = 3.0e-27 Identity = 61/66 (92.42%), Postives = 64/66 (96.97%), Query Frame = 1
BLAST of ClCG11G005400 vs. NCBI nr
Match: gi|703127348|ref|XP_010103808.1| (hypothetical protein L484_008660 [Morus notabilis]) HSP 1 Score: 127.5 bits (319), Expect = 8.8e-27 Identity = 60/66 (90.91%), Postives = 63/66 (95.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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