CmoCh15G001990 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G001990
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Cytochrome c oxidase biogenesis protein Cmc1-like
Location	Cmo_Chr15 : 953382 .. 956296 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTAAAAGCCAATTCAAGTAATTTCAACAAAAATGGAATGTGAATAAAAAATTTAAGATTTAGGGTTTGGATTAAATGGAAAAAAGATGTTAAAATTGGGGAGTGGAATTGATACCGCCGGAGTTGGCTTCGAAGTTCGAACGTCCTGCTTTCGACGAAACTGAAGGCATTTTGACGGCTACTTCCTGTTCTCCTACTGCTCTCTGAAATGGGTTACATTCAGGAAGCTCGAGAGAATCATGTGAAGAAGAAAGTAGAGGAAGGTATTATCAAATGCTCTTATCGTCCTCTTCATCCTTAATCTGCTTTTGATTGTTGACGAAAATGATGGGTCAATTTAATTTTTGAGTCTAGAGAACTTATCGAAATCTGGTGTTGGTTATTTCTCCATTTCCAGCTTTGCGCAGCAAAATGAAGCAGAAGGCGATGAAGGAATGCGATCATTACGCTTCGAAATATGCTGAATGCGCCTATGGCAGAACGTTATCCGTCGTTTTCAAGTGTCGCAATCAAGCTAAAGAATTGAACAATTGCCTTCACCAATAGTGAGTCTCTGATTGTTTTGTTTGGTTTCTCTTCTGTAGATCATAATGTGCTTTATCGTTGTTCCTCGTGCATCAATCATCATATTTAGTTGAATTGATAAGATACATCGTTGTCCTTTTAATTGAGGGTTTCAGTGATAGTAGCTTTAGATGCTGGGTTTGATTTGTGGAAAATCAAGCATGGATCGAGTTTGATTTTAGGGACATGTTAGTGACACATGAAAGTAAGTCAAGAGCTGGAGTCATATGGCCAAACATGTGACTTGACTTCTATGGGGATGAATAACTACATAGTGCTTATGTAACTCCACCGCCATTAGATATTGTCCTCGGCGGGCTTTTCTTTTTAGGCTTACCCTCAAGGTTTTTAAAACGTGTCTGCTAGGGAGAAGTTTCCACACTCTTATAAAGAATGATTCGTTCCCCCTCTCCAACCAACATGGGATCTCACAAGTTACCACTTACCACTTTTCATGTTTATAGATGTGATTAAGGATTTGCCCTAGAATGCATTCTCAGTGGGGACGGGCATATTCATCATCTACATGCCTTGAGTCACCTATGGAGCGTATTATGGCACAGGAGTCACCATTAAGTGACGTTTAACACAAAAACATTAAAACAAATCTTAGCCTACCAGAGAAACAAGATTCATCTTGGGTGTTAAGACTTATAGAGTGAGCCACGCTATGGTGCAATGCAATGGCCTTTTCCTTGTTCAGGTTGTTAGTCATCTCTGCCGTATCGTTGTTGAACTATATGTAGTTTTGTTGCTAGAAGGTTAGTTGGCCTGTTATTTCTCTCGGACTTCTATTTAATGAACCCTGTAATGCCTTTGTAAACACTCAATATTGTCGATTCTGATCAAGAATCGTGTTAGTTCTTGAGTAGGGCAAGATGAAAACCCTAAGCCCAAGCCGGGTATCGGTGCATAGAGTAAAAAAGAGTGCATGAACATACAACGTGCATGATCAAGAGTTTGTTGGGAGAATGAGCTTTTAGGCTAAGCCACCTATGGGCAAAGAAGATGCTTATTGAGTAGCTTGAGTGAATGCAACCAAGCGGACTCGGCATCAAAAGGAAGAACCCAGCATTGACTTTAATGTGAGAGGATCTTGAATAGAGTATTGAGGCAGGTGTGACGGCAGGTAATGAGTCAGAGTAGTATCTAGGACTACACGATTTAAGGTGGTCTGATCAATATTGGCGATTTGATTAGAGGATTCATACCCTATTATAAAAAATGCTGATCGTTAGTGAGAAGAAAGAGGAGAGCCTCTGCTCTCTCCACAGTATTCTCTCCACGGTATTCTTAAGGACCTCTCTCGTCAGGTGGCTATCGGCCCTATTTATCAATAAATGATATAGGATTGGAATAAATAAACTCTCTCTGGAAGAAGATTTTAATAAGATTCAAATAGGAAGAGAGGGAGAAGGCTAAGTAAGCTACGCCCCCTTAACTCTCTATCTATAGAAAAAAAGTCCGCAAGCGAGGGAGAAAGGAATGTTGCTCACTCCAGAAATACGAGTGTCTGCGAACGATACCATTCTTCTAGGCAAAGCCTCCTTCAATAAAAATAAAAATTGTCAGATGTTAAAAGGTAATCCTTGATCATTTTAGCTGCAAGAGAAGCTAATATGAACGGAAGAAAAAATTTTCATTTTGAAACTCGTCTTGCCATGGAGATTAACGGGTGAGGGGGTGAATGTATATATAAACAGGTTTTGACAAAATCAACATCATTGATTTTCTTAGAACTATTTGCCGTTTTATATAGGAGCTTCATTCTCTTGTAAATTCTCTTCGTTCCTTCCTAATGGCAAATATTATTAGCCAAAACGGTAGTAAATTTAAAGAACGATGCATAGTTTGTCTAAGAATAATTAAATACATCTATTCTCGTTTTGTTTTCCAGCACCAACGACACCGTGTTGGAAGAGATGAAGCGGGAATATGCACATCAACACGATGGGAAGCCGTGAGGAAAAGCATAACATCATTCAATGAGAAAACTGAAGAGTGCTGTTATGGGTCAATCTCAGGTGAACTTTCAGACGATACTATGTTGAATTTGTCACTAGAAGCATTGATATATTAGTAAGAACTTAACGAAAGTTGAGGCTTTATGGATTTTGTAATCTGGATAAGCAAAGGAATTCTATTTTATTTGGATAAGAATGATCTTTCATCTCTAATCATAGTGTAAATTTCGAAGCTACTCTTCTTTGTCAAAAACCTTTACCAGGAATGAGTTCCATCTGCCATTAAGGCTCCTCGTTCATAGATTTTAGGGAGCCATTATCTGATTTATGGATTCCATCCTTCTTGCCTTGCTTGGAGTGTAAAACGAGATGAGCAATAAATCATG

mRNA sequence

TATTAAAAGCCAATTCAAGTAATTTCAACAAAAATGGAATGTGAATAAAAAATTTAAGATTTAGGGTTTGGATTAAATGGAAAAAAGATGTTAAAATTGGGGAGTGGAATTGATACCGCCGGAGTTGGCTTCGAAGTTCGAACGTCCTGCTTTCGACGAAACTGAAGGCATTTTGACGGCTACTTCCTGTTCTCCTACTGCTCTCTGAAATGGGTTACATTCAGGAAGCTCGAGAGAATCATGTGAAGAAGAAAGTAGAGGAAGCTTTGCGCAGCAAAATGAAGCAGAAGGCGATGAAGGAATGCGATCATTACGCTTCGAAATATGCTGAATGCGCCTATGGCAGAACGTTATCCGTCGTTTTCAAGTGTCGCAATCAAGCTAAAGAATTGAACAATTGCCTTCACCAATACACCAACGACACCGTGTTGGAAGAGATGAAGCGGGAATATGCACATCAACACGATGGGAAGCCGTGAGGAAAAGCATAACATCATTCAATGAGAAAACTGAAGAGTGCTGTTATGGGTCAATCTCAGGTGAACTTTCAGACGATACTATGTTGAATTTGTCACTAGAAGCATTGATATATTAGTAAGAACTTAACGAAAGTTGAGGCTTTATGGATTTTGTAATCTGGATAAGCAAAGGAATTCTATTTTATTTGGATAAGAATGATCTTTCATCTCTAATCATAGTGTAAATTTCGAAGCTACTCTTCTTTGTCAAAAACCTTTACCAGGAATGAGTTCCATCTGCCATTAAGGCTCCTCGTTCATAGATTTTAGGGAGCCATTATCTGATTTATGGATTCCATCCTTCTTGCCTTGCTTGGAGTGTAAAACGAGATGAGCAATAAATCATG

Coding sequence (CDS)

ATGGGTTACATTCAGGAAGCTCGAGAGAATCATGTGAAGAAGAAAGTAGAGGAAGCTTTGCGCAGCAAAATGAAGCAGAAGGCGATGAAGGAATGCGATCATTACGCTTCGAAATATGCTGAATGCGCCTATGGCAGAACGTTATCCGTCGTTTTCAAGTGTCGCAATCAAGCTAAAGAATTGAACAATTGCCTTCACCAATACACCAACGACACCGTGTTGGAAGAGATGAAGCGGGAATATGCACATCAACACGATGGGAAGCCGTGA

Homology

[Close]

BLAST of CmoCh15G001990 vs. Swiss-Prot
Match: Y5933_DICDI (Uncharacterized protein DDB_G0275933 OS=Dictyostelium discoideum GN=DDB_G0275933 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 4.6e-07
Identity = 25/66 (37.88%), Postives = 43/66 (65.15%), Query Frame = 1


Query: 16 VEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELNNCLHQYTNDTVLE 75
          V+  LR K+K +++KEC  + + +A+C+  + +SVV++CR   + + NCL +YT    L 
Sbjct: 30 VDSYLRQKLKDQSLKECSSHVAAFADCSKDKYISVVWECRELQQLMKNCLVEYTTSERLI 89

Query: 76 EMKREY 82
           MKRE+
Sbjct: 90 GMKREW 95

[Close]

BLAST of CmoCh15G001990 vs. TrEMBL
Match: A0A0A0KVX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G644540 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 7.1e-39
Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKA+KECD YASKYAECAYGRTLSVVFKCRNQAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYAHQHDGKP 90
          LNNCLH YTND++L+EMKREYA Q DGKP
Sbjct: 61 LNNCLHSYTNDSILDEMKREYALQQDGKP 89

[Close]

BLAST of CmoCh15G001990 vs. TrEMBL
Match: A0A0J8D2W2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g026620 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.1e-34
Identity = 72/88 (81.82%), Postives = 82/88 (93.18%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKA+KECD YA+KYAECAYGRTLSVV+KCR QAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDDYAAKYAECAYGRTLSVVWKCRQQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYAHQHDGK 89
          LN+CLHQYTND++LE +K+EY HQ + +
Sbjct: 61 LNSCLHQYTNDSILEGLKKEYMHQQEAE 88

[Close]

BLAST of CmoCh15G001990 vs. TrEMBL
Match: W9RUZ3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008660 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 5.3e-34
Identity = 74/88 (84.09%), Postives = 80/88 (90.91%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYA KYAECA GRT+SVV++CR QAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYALKYAECATGRTISVVWQCRQQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYAHQHDGK 89
          LNNCLHQ+TND VLE+MKREY  Q D K
Sbjct: 61 LNNCLHQHTNDAVLEKMKREYTLQQDAK 88

[Close]

BLAST of CmoCh15G001990 vs. TrEMBL
Match: A0A059AE81_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01478 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 9.0e-34
Identity = 73/88 (82.95%), Postives = 80/88 (90.91%), Query Frame = 1


Query: 1   MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
           MGY+QEARENHVKKKVEEALRSKMKQKA+KECD+YASKYAECA GRT SVV++CR QAKE
Sbjct: 39  MGYVQEARENHVKKKVEEALRSKMKQKALKECDYYASKYAECAVGRTFSVVWQCRKQAKE 98

Query: 61  LNNCLHQYTNDTVLEEMKREYAHQHDGK 89
           LN+CLH YTND VLEEMKREYA   +GK
Sbjct: 99  LNDCLHHYTNDAVLEEMKREYALNQEGK 126

[Close]

BLAST of CmoCh15G001990 vs. TrEMBL
Match: V4T3B3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013207mg PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.2e-33
Identity = 73/88 (82.95%), Postives = 78/88 (88.64%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGY+QEARENHVKKKVEEALRSKMK KA+KECD Y SKYA+CA GRT SVV+KCR QAKE
Sbjct: 1  MGYVQEARENHVKKKVEEALRSKMKAKALKECDQYTSKYAQCASGRTFSVVWKCREQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYAHQHDGK 89
          LNNCLHQYTND VLEEMK+EY  Q DGK
Sbjct: 61 LNNCLHQYTNDAVLEEMKKEYMLQQDGK 88

[Close]

BLAST of CmoCh15G001990 vs. TAIR10
Match: AT5G16060.1 (AT5G16060.1 Cytochrome c oxidase biogenesis protein Cmc1-like)

HSP 1 Score: 131.0 bits (328), Expect = 3.7e-31
Identity = 63/86 (73.26%), Postives = 72/86 (83.72%), Query Frame = 1


Query: 3  YIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKELN 62
          Y+++ARENHVKKKVEEALRSKMK KA+ ECD Y SKYA+CA GRT SVV+ CR QA+ELN
Sbjct: 4  YVEQARENHVKKKVEEALRSKMKAKALMECDQYVSKYAQCATGRTFSVVWTCRKQARELN 63

Query: 63 NCLHQYTNDTVLEEMKREYAHQHDGK 89
           CLHQ+TND VLEEMKR Y  Q +GK
Sbjct: 64 TCLHQFTNDNVLEEMKRAYMVQEEGK 89

[Close]

BLAST of CmoCh15G001990 vs. NCBI nr
Match: gi|659119082|ref|XP_008459466.1| (PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis melo])

HSP 1 Score: 172.9 bits (437), Expect = 2.4e-40
Identity = 83/89 (93.26%), Postives = 87/89 (97.75%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECAYGRTLSV+FKCRNQAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECAYGRTLSVIFKCRNQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYAHQHDGKP 90
          LNNCLH YTND+VL+EMKREYA QHDGKP
Sbjct: 61 LNNCLHLYTNDSVLDEMKREYALQHDGKP 89

[Close]

BLAST of CmoCh15G001990 vs. NCBI nr
Match: gi|449447494|ref|XP_004141503.1| (PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 1.0e-38
Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKA+KECD YASKYAECAYGRTLSVVFKCRNQAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDRYASKYAECAYGRTLSVVFKCRNQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYAHQHDGKP 90
          LNNCLH YTND++L+EMKREYA Q DGKP
Sbjct: 61 LNNCLHSYTNDSILDEMKREYALQQDGKP 89

[Close]

BLAST of CmoCh15G001990 vs. NCBI nr
Match: gi|1009127189|ref|XP_015880562.1| (PREDICTED: uncharacterized protein DDB_G0275933 [Ziziphus jujuba])

HSP 1 Score: 155.2 bits (391), Expect = 5.3e-35
Identity = 76/88 (86.36%), Postives = 81/88 (92.05%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGY+QEARENHVKKKVEEALRSKMKQKA+KECDHYASKYAECA GRTLSVV+KCR QAKE
Sbjct: 1  MGYVQEARENHVKKKVEEALRSKMKQKALKECDHYASKYAECATGRTLSVVWKCRTQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYAHQHDGK 89
          LN+CLHQYTND VLEEMK+ Y  Q DGK
Sbjct: 61 LNHCLHQYTNDAVLEEMKKVYMLQQDGK 88

[Close]

BLAST of CmoCh15G001990 vs. NCBI nr
Match: gi|568857432|ref|XP_006482270.1| (PREDICTED: uncharacterized protein DDB_G0275933 [Citrus sinensis])

HSP 1 Score: 152.5 bits (384), Expect = 3.4e-34
Identity = 74/88 (84.09%), Postives = 79/88 (89.77%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGY+QEARENHVKKKVEEALRSKMKQKA+KECD Y SKYA+CA GRT SVV+KCR QAKE
Sbjct: 1  MGYVQEARENHVKKKVEEALRSKMKQKALKECDQYTSKYAQCASGRTFSVVWKCREQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYAHQHDGK 89
          LNNCLHQYTND VLEEMK+EY  Q DGK
Sbjct: 61 LNNCLHQYTNDAVLEEMKKEYMLQQDGK 88

[Close]

BLAST of CmoCh15G001990 vs. NCBI nr
Match: gi|731315741|ref|XP_010692765.1| (PREDICTED: uncharacterized protein DDB_G0275933 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 152.1 bits (383), Expect = 4.5e-34
Identity = 72/88 (81.82%), Postives = 82/88 (93.18%), Query Frame = 1


Query: 1  MGYIQEARENHVKKKVEEALRSKMKQKAMKECDHYASKYAECAYGRTLSVVFKCRNQAKE 60
          MGYIQEARENHVKKKVEEALRSKMKQKA+KECD YA+KYAECAYGRTLSVV+KCR QAKE
Sbjct: 1  MGYIQEARENHVKKKVEEALRSKMKQKALKECDDYAAKYAECAYGRTLSVVWKCRQQAKE 60

Query: 61 LNNCLHQYTNDTVLEEMKREYAHQHDGK 89
          LN+CLHQYTND++LE +K+EY HQ + +
Sbjct: 61 LNSCLHQYTNDSILEGLKKEYMHQQEAE 88

The following BLAST results are available for this feature:

BLAST of CmoCh15G001990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5933_DICDI	4.6e-07	37.88	Uncharacterized protein DDB_G0275933 OS=Dictyostelium discoideum GN=DDB_G0275933...	[more]

BLAST of CmoCh15G001990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVX6_CUCSA	7.1e-39	91.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G644540 PE=4 SV=1	[more]
A0A0J8D2W2_BETVU	3.1e-34	81.82	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g026620 PE=4 S...	[more]
W9RUZ3_9ROSA	5.3e-34	84.09	Uncharacterized protein OS=Morus notabilis GN=L484_008660 PE=4 SV=1	[more]
A0A059AE81_EUCGR	9.0e-34	82.95	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01478 PE=4 SV=1	[more]
V4T3B3_9ROSI	1.2e-33	82.95	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013207mg PE=4 SV=1	[more]

BLAST of CmoCh15G001990 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16060.1	3.7e-31	73.26	Cytochrome c oxidase biogenesis protein Cmc1-like	[more]

BLAST of CmoCh15G001990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119082\|ref\|XP_008459466.1\|	2.4e-40	93.26	PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis melo]	[more]
gi\|449447494\|ref\|XP_004141503.1\|	1.0e-38	91.01	PREDICTED: uncharacterized protein DDB_G0275933 [Cucumis sativus]	[more]
gi\|1009127189\|ref\|XP_015880562.1\|	5.3e-35	86.36	PREDICTED: uncharacterized protein DDB_G0275933 [Ziziphus jujuba]	[more]
gi\|568857432\|ref\|XP_006482270.1\|	3.4e-34	84.09	PREDICTED: uncharacterized protein DDB_G0275933 [Citrus sinensis]	[more]
gi\|731315741\|ref\|XP_010692765.1\|	4.5e-34	81.82	PREDICTED: uncharacterized protein DDB_G0275933 [Beta vulgaris subsp. vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013892	Cyt_c_biogenesis_Cmc1-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G001990.1	CmoCh15G001990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013892	Cytochrome c oxidase biogenesis protein Cmc1-like	PFAM	PF08583	Cmc1	coord: 20..81 score: 5.4
None	No IPR available	PANTHER	PTHR22977	UPF0287 FAMILY	coord: 1..84 score: 9.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G001990	Cucsa.238070	Cucumber (Gy14) v1	cgycmoB0660
CmoCh15G001990	CmaCh15G001860	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G001990	Csa5G644540	Cucumber (Chinese Long) v2	cmocuB287
CmoCh15G001990	MELO3C022093	Melon (DHL92) v3.5.1	cmomeB239
CmoCh15G001990	ClCG11G005400	Watermelon (Charleston Gray)	cmowcgB240
CmoCh15G001990	CSPI05G30060	Wild cucumber (PI 183967)	cmocpiB296
CmoCh15G001990	Lsi03G002360	Bottle gourd (USVL1VR-Ls)	cmolsiB265
CmoCh15G001990	Cp4.1LG01g22030	Cucurbita pepo (Zucchini)	cmocpeB274
CmoCh15G001990	Cp4.1LG13g07750	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G001990	MELO3C022093.2	Melon (DHL92) v3.6.1	cmomedB271
CmoCh15G001990	CsaV3_5G039180	Cucumber (Chinese Long) v3	cmocucB0348
CmoCh15G001990	Cla97C11G212360	Watermelon (97103) v2	cmowmbB278
CmoCh15G001990	Bhi06G000090	Wax gourd	cmowgoB0377
CmoCh15G001990	CsGy5G029440	Cucumber (Gy14) v2	cgybcmoB584
CmoCh15G001990	Carg02177	Silver-seed gourd	carcmoB0362
CmoCh15G001990	Carg05933	Silver-seed gourd	carcmoB0030

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh15G001990	CmoCh04G029850	Cucurbita moschata (Rifu)	cmocmoB256

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G001990	Wax gourd	cmowgoB0374
CmoCh15G001990	Wax gourd	cmowgoB0392
CmoCh15G001990	Cucurbita moschata (Rifu)	cmocmoB261
CmoCh15G001990	Cucurbita maxima (Rimu)	cmacmoB687
CmoCh15G001990	Cucurbita maxima (Rimu)	cmacmoB692
CmoCh15G001990	Melon (DHL92) v3.5.1	cmomeB263
CmoCh15G001990	Watermelon (97103) v1	cmowmB275
CmoCh15G001990	Cucurbita pepo (Zucchini)	cmocpeB279
CmoCh15G001990	Melon (DHL92) v3.6.1	cmomedB280
CmoCh15G001990	Silver-seed gourd	carcmoB0031