CsGy5G015610 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G015610
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Cytochrome b-c1 complex subunit Rieske, mitochondrial
Location	Chr5 : 21820690 .. 21824550 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAAAAATTGAGGTCAAATAGACGAGTCTTGTACCCTATGCGTTTCTTCTTCTGAGTTCTCGTTATCCCTCCCAAACTCAAACCTGAAGCCTTACGAAGATGTTGAGGGTTGCTGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAGGCCTACAATTGCTTCTTCTTTGCCCCTTTCTCACAACATCATTGATTCCACTGATTCCAATGATTTCAGATCCGCTGGATTCTTCCACACTTTTCCCATCCGACCTCACTTTGATCGCAACTCTAGAGGTTATCTTCTTACTTCTTTATTTCTTAATTCCTGCTCCTTCTTCATTAGTTTCCTTTTTTTAGGGTTTGTTTTTTCTAGCGACGCGATGCGATTCCTTTTTCGCTCTTTTAGAGCGCAAAATCATATCTGGATTGCACTTGCTATTGCCGCGTTATAGGTTTTCATCTTTGTTGTTCTACTGTTCGATCTCTATTTTATTATTTTGATTCATGTTTTTTGTATATTGGTTTCTCGTTTTGTAAATAATTTCAATTTGTGAACAAGTTGTTTTCTGGTACTTTTGTGGCGTTTTAACGATATCAATCTTCACCGAACAATCGCTTCTTCTTCTTCTCCTTTCGTTTCTAAATCTTCCACTGTGAAATGTTTCTTCATCCCAAAAAAAACTTCTACCATTTCAGCTCATACTTTTAACTTTATTTTGATCTTTTATGTTATATCTACTTCAAACTACGTGATATCATTCATATGCTATATTGCCGAGAATTATTCTGTTAGTACAGAAGTTTTTGTGTGAATTGGTCGGTGGGATTATATGTTACTTTAATTCCATATTTTATGTGCTTAGAAAATTTTGAATTGGTTCTGGTGAAAGCCCACCAATATCAATATGAGGTATTTCGATTAGCAGATTTATTTTAGTTTTTCTTTTATTTGGCTGTTCGTTGGGTATAATTTATTGTTGTTGAAAGAGTGTTGTTAGATGTTTAAGCCATTGTCTTCCCTGTGTAGAGTGTTTATGTTATTATCGGGAAGAATTTTGATCAATTTTCTGAATTTGAATACACTATCAATAAAGTTTGCTAACAGTATTTTACCGTTTTGTTGCAAGAAATAATGTAGTACGAGTATAAGAATAGACGAACTAGGCTATAATTGCAAACTAACTTCTTATATACCACAAGGAAGTGACTGGAATTGCTATAATTACAAAATAACTTCTTATGTACCATAAAGAAGAAGTGATTGGAGAATTCCAGACACTGGGTAGACTTTTGAGAAAGATGCCTTCGGTAATGGGTCCTTTTTGTTGTATCCTTTGTGGGAAGGCGGAGAAAAACCTAGATCACCTTCTGGGAGTGTTAGTATGCTAGTTATGTGAGAAATTTCTATTTTAGGACTTTGATTTTGTGTTAGCTCACCAGAGGGATATTTGTATTGTGATTGGAGAGTTCCTTCATCCACCTTTCAAAGAGAGAGGCTGTTTTTGTGGTTTGTGGGTGTGTTCGTTTTGCTGTGGGATCTTCGGGGGAAGAGGAAAAACGTGTTTAGAGTTGTAGATTGGGTCGCTATTGAGGTTTGATCCTTGGTGAGGTTCCATGTTACTCGTTGGGTTTCAGTTTTGAAGAATTTTTATAATTGTTCTCTAGGCAAGATCTTACTTAGTTGTGGGGTTGGAGTTTTTCCTGTGGGTTTTGGTTTTTTTTATGCACTTGTATTCTCTAGTTTTTTTTCTCCATGAAAGCAGGTGTTTCTATAAAAAAGGAATATCTTTTTACAATATGGTATTGTAGTGTTTCAATTAGATGGTGACATATTTCACTTCTAATTAAAAACTTTGTACACTCTGTTGTTCAACTTGTTTTTTTATTCATTCCTTCCTTCAATTTAAAGAAGGTTCATTCATTGTACATTCGCACAGAAAATACAGATCCCTATTTCTATCGTTTTACATTCATTTGAAATACTGACCCTGGACACCCCAAAGAAGATGTATTTGTATATTGTTACAAAAGAACCGAAAAGTGTAGGAGTTATCTTTAAAGACCTGGTTTCTCCTTCCAGGTTCCACCCATTTGTCTCTAAAAAAATTTAATCCTCCCCCTACTTTTAGTTTTAGTCTTGAAGTTAATTTGAAGAAAAACACGCTAGTTCTTGCAACGTCGAAACAAGGTCTGCCTTTCATTTTGATGGATGGAAAGTCCTCCCTAAAGGCTCACACCCGTGAATATTAAAGACAATCCTGCTCCATTGGCCCTGAAGTTAAATCTATTCGAACTCAGTTGAAAATTCTTAAGATTTGTTCTAGAAATTTGGGATAACAAGAACAATTACACAACCTGGCTTGAACAGGGTCTGTTCTACAGGTTGTACATCTGTATCTTTGAGTTCTAAGGATAACAAAAACAATTACAGAATACTTTTGTTATCTTGAGAATTTGTCTTCTATGCCTCTTTGATGATTGGTTTGTATTCTTCTGCAAAATTGACTGGCCATTGTGGCTGAAGTTTTTATTTCTGGATGCTTTATACAAATTAGTTGTGTATGCACAACTAATTTCTGGATATTTTATACATGTATTACTGCTCTAGAAGTTGTCAAAACTTTAATCCTGCATATAGGTTATAGCGACAAAATCGTTCATCACTAAATTTTGTACCAATAAGCAGGCAGCATAAATTTAAGGAAGAGTGCATTCTGGCTAAGGTGATTGATCTGGGTGATTGCGTTCAGTTATATTTGTAACTCAGTCCTTTTATTATGACTATTGAGTGATTTTTCCTTTCTCCTATGGTGAAGTTTTATGATTTTATACAAATATCTCTTTGCAGGTTTCGCGTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTCCTGCTACTATAGCAGCCGTTAAGAACCCTACTTCAAAGATAGTCTATGACGAATACAATCATGAGCGATTTCCACCGGGTGACCCCAGCAAGCGTGCGTTTGCTTACTTCGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAGGACGTTCTAGCCCTTGCCTCGCTTGAGGTCGACCTCTCTAGCATTGAGCCTGGTGCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTATTCATCAGAAGACGAACGGAGGAGGATATTAAGTTAGCCAACAGCGTCGATATTGGAACTCTTCGTGACCCTCAACAGGATGGGGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTGGTTGGCGTCTGCACGCATCTTGGTTGCATTCCCTTGCCCAATGCTGGTGATTTTGGTGGGTGGTTCTGTCCGTGCCATGGTTCCCACTACGATGTGTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAAGATGAGAAGAAGAAATGAAGCTCTTTTTTCAGGGTTTGTGTAGTAGTGATTTTGAAACCTTCATCAAATGATAATGTCGAAGATTTATTGCAGACATAATTTTATTATTTTATTTCTTTGAGTTCATCTTTTTCTTTATGCAATGAGAATACTGTAACACTCCCGTATCTTGGTGCATTAATGTATCTGAATAAGTTGCTTCACAATGGGTGGTTGCCCCATTAAGTGATTGGAGACCATCTTTTTTATTATGGATGCTAAATTGCTTTATTTACTTTTTGCTTTTTATAATTGGTAGCAATTTATAGGTACATTTGAGCATCTTGATAAAAACATATATGGGGTATACATGTCACATATGAATTGCCAATGCTCTTTTGA

mRNA sequence

AAACAAAAATTGAGGTCAAATAGACGAGTCTTGTACCCTATGCGTTTCTTCTTCTGAGTTCTCGTTATCCCTCCCAAACTCAAACCTGAAGCCTTACGAAGATGTTGAGGGTTGCTGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAGGCCTACAATTGCTTCTTCTTTGCCCCTTTCTCACAACATCATTGATTCCACTGATTCCAATGATTTCAGATCCGCTGGATTCTTCCACACTTTTCCCATCCGACCTCACTTTGATCGCAACTCTAGAGGTTTCGCGTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTCCTGCTACTATAGCAGCCGTTAAGAACCCTACTTCAAAGATAGTCTATGACGAATACAATCATGAGCGATTTCCACCGGGTGACCCCAGCAAGCGTGCGTTTGCTTACTTCGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAGGACGTTCTAGCCCTTGCCTCGCTTGAGGTCGACCTCTCTAGCATTGAGCCTGGTGCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTATTCATCAGAAGACGAACGGAGGAGGATATTAAGTTAGCCAACAGCGTCGATATTGGAACTCTTCGTGACCCTCAACAGGATGGGGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTGGTTGGCGTCTGCACGCATCTTGGTTGCATTCCCTTGCCCAATGCTGGTGATTTTGGTGGGTGGTTCTGTCCGTGCCATGGTTCCCACTACGATGTGTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAAGATGAGAAGAAGAAATGAAGCTCTTTTTTCAGGGTTTGTGTAGTAGTGATTTTGAAACCTTCATCAAATGATAATGTCGAAGATTTATTGCAGACATAATTTTATTATTTTATTTCTTTGAGTTCATCTTTTTCTTTATGCAATGAGAATACTGTAACACTCCCGTATCTTGGTGCATTAATGTATCTGAATAAGTTGCTTCACAATGGGTGGTTGCCCCATTAAGTGATTGGAGACCATCTTTTTTATTATGGATGCTAAATTGCTTTATTTACTTTTTGCTTTTTATAATTGGTAGCAATTTATAGGTACATTTGAGCATCTTGATAAAAACATATATGGGGTATACATGTCACATATGAATTGCCAATGCTCTTTTGA

Coding sequence (CDS)

ATGTTGAGGGTTGCTGCTCGAAGGCTCTCGTCACTCTCTTCTTCGCATTTCAGGCCTACAATTGCTTCTTCTTTGCCCCTTTCTCACAACATCATTGATTCCACTGATTCCAATGATTTCAGATCCGCTGGATTCTTCCACACTTTTCCCATCCGACCTCACTTTGATCGCAACTCTAGAGGTTTCGCGTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTCCTGCTACTATAGCAGCCGTTAAGAACCCTACTTCAAAGATAGTCTATGACGAATACAATCATGAGCGATTTCCACCGGGTGACCCCAGCAAGCGTGCGTTTGCTTACTTCGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAGGACGTTCTAGCCCTTGCCTCGCTTGAGGTCGACCTCTCTAGCATTGAGCCTGGTGCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTATTCATCAGAAGACGAACGGAGGAGGATATTAAGTTAGCCAACAGCGTCGATATTGGAACTCTTCGTGACCCTCAACAGGATGGGGAGAGAGTTAAAGATCCAGAATGGCTTGTTGTGGTTGGCGTCTGCACGCATCTTGGTTGCATTCCCTTGCCCAATGCTGGTGATTTTGGTGGGTGGTTCTGTCCGTGCCATGGTTCCCACTACGATGTGTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAA

Protein sequence

MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG

Homology

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BLAST of CsGy5G015610 vs. NCBI nr
Match: XP_004143762.1 (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis sativus] >KGN51130.1 hypothetical protein Csa_5G464790 [Cucumis sativus])

HSP 1 Score: 555.8 bits (1431), Expect = 8.0e-155
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CsGy5G015610 vs. NCBI nr
Match: XP_008465508.1 (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 537.3 bits (1383), Expect = 2.9e-149
Identity = 263/274 (95.99%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLR+AARRLSSLSSSHFRPTIASSLP SHNIIDSTDSNDFRS GFF+TFPI PHFDRNSR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSTDSNDFRSGGFFNTFPIGPHFDRNSR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL+S KE NLVPDVPAT+AAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALSSMKETNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           EEDIKLANSVDIGTLRDPQQDGERVKDPEWL+VVGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CsGy5G015610 vs. NCBI nr
Match: XP_008465498.1 (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 520.8 bits (1340), Expect = 2.9e-144
Identity = 253/274 (92.34%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLR+AARRLSSLSSSHFRPTIASSLP SHNIIDS DSNDFRSAGFF+TFPIRPHFDRNSR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSADSNDFRSAGFFNTFPIRPHFDRNSR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STK++ L+ D+PAT+AAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLIMDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of CsGy5G015610 vs. NCBI nr
Match: XP_004143763.1 (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis sativus] >KGN51131.1 hypothetical protein Csa_5G464800 [Cucumis sativus])

HSP 1 Score: 513.8 bits (1322), Expect = 3.5e-142
Identity = 250/274 (91.24%), Postives = 265/274 (96.72%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLR+AARRLSSLSSSHFRPTIASS P SHNIIDSTDSNDFRSAGFF+TFPIR  FDR+SR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STK++ L+ D+PAT+AAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of CsGy5G015610 vs. NCBI nr
Match: XP_023550035.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 508.4 bits (1308), Expect = 1.5e-140
Identity = 251/277 (90.61%), Postives = 262/277 (94.58%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTD---SNDFRSAGFFHTFPIRPHFDR 60
           MLR+AARRLSSLSSSHFRPTIASSLP SH IID  D   SNDFRS   F+TFP  P FDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDR 60

Query: 61  NSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           N RGFASDALTSTKE +LVPDVPAT+AAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTE+DIKLANSVDIG+LRDPQQDGERVKDPEWL+VVGVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 277

[Close]

BLAST of CsGy5G015610 vs. TAIR10
Match: AT5G13440.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 389.4 bits (999), Expect = 1.8e-108
Identity = 199/280 (71.07%), Postives = 225/280 (80.36%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNS- 60
           MLRVA RRL S+S    R + A+S  LS    D T S+   S+    + P       NS 
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVLSR---DHTLSDGGNSSSASRSVPSADLSSFNSY 60

Query: 61  -----RGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFA 120
                RGFAS  +T   E     +VPAT+ AVK P SKIVYD++NHER+PPGDPSKRAFA
Sbjct: 61  HRSVIRGFASQVITQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFA 120

Query: 121 YFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPV 180
           YFVLSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG TVTVKWRGKPV
Sbjct: 121 YFVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPV 180

Query: 181 FIRRRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGW 240
           FIRRRTE+DIKLANSVD+G+LRDPQ+D  RVK+PEWL+VVGVCTHLGCIPLPNAGD+GGW
Sbjct: 181 FIRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDYGGW 240

Query: 241 FCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           FCPCHGSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 241 FCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 274

[Close]

BLAST of CsGy5G015610 vs. TAIR10
Match: AT5G13430.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 385.2 bits (988), Expect = 3.4e-107
Identity = 195/275 (70.91%), Postives = 222/275 (80.73%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSA-GFFHTFPIRPHFDRNS 60
           MLRVA RRL S+S    R + A+S  +S +   S    D  SA     +  +  +     
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVVSRDHTLSDGGGDSSSAPRSLPSADLSSYHRSLI 60

Query: 61  RGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLS 120
           RGF+S  L    E     +VPAT+ AVK P SKIVYD++NHER+PPGDPSKRAFAYFVLS
Sbjct: 61  RGFSSQVLAQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLS 120

Query: 121 GGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRR 180
           GGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG TVTVKWRGKPVFIRRR
Sbjct: 121 GGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRR 180

Query: 181 TEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCH 240
           TE+DIKLANSVD+G+LRDPQ+D  RVK+PEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCH
Sbjct: 181 TEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCH 240

Query: 241 GSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           GSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 241 GSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of CsGy5G015610 vs. TAIR10
Match: AT4G03280.1 (photosynthetic electron transfer C)

HSP 1 Score: 58.5 bits (140), Expect = 7.3e-09
Identity = 30/77 (38.96%), Postives = 40/77 (51.95%), Query Frame = 0


Query: 207 DPEWLVVV-----------GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAP 266
           DP +LVV             VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP
Sbjct: 136 DPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAP 195

Query: 267 YNLEVPTYTFLEDNKLL 273
            +L +      E  K+L
Sbjct: 196 LSLALAHADIDEAGKVL 211

[Close]

BLAST of CsGy5G015610 vs. Swiss-Prot
Match: sp|P51132|UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.2e-112
Identity = 203/276 (73.55%), Postives = 233/276 (84.42%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDST--DSNDFRSAGFFHTFPIRPHFDRN 60
           MLR+A RR SSLS    R  + S  P S   I +    S+D  S+    +  +   F  +
Sbjct: 1   MLRIAGRRASSLS----RWPVRSVAPSSSAFISANHFSSDDDSSSPRSISPSLASVFLHH 60

Query: 61  SRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVL 120
           +RGF+S++++   +  LVPD+P T+AA+KNPTSKIVYDE+NHER+PPGDPSKRAFAYFVL
Sbjct: 61  TRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVL 120

Query: 121 SGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRR 180
           +GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIRR
Sbjct: 121 TGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRR 180

Query: 181 RTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPC 240
           RTE+DI LANSVD+G+LRDPQQD ERVK PEWLVV+GVCTHLGCIPLPNAGDFGGWFCPC
Sbjct: 181 RTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPC 240

Query: 241 HGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           HGSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 241 HGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of CsGy5G015610 vs. Swiss-Prot
Match: sp|P49729|UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 3.1e-110
Identity = 185/220 (84.09%), Postives = 209/220 (95.00%), Query Frame = 0


Query: 55  FDRNSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFA 114
           F  ++RGF+S++++   +  LVPD+P T+AA+KNPTSKIVYDE+NHER+PPGDPSKRAFA
Sbjct: 39  FLHHTRGFSSNSVSPAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFA 98

Query: 115 YFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPV 174
           YFVL+GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPV
Sbjct: 99  YFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPV 158

Query: 175 FIRRRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGW 234
           FIRRRTE+DI LANSVD+G+LRDPQQD ERVK+PEWLVV+GVCTHLGCIPLPNAGDFGGW
Sbjct: 159 FIRRRTEDDISLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGW 218

Query: 235 FCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           FCPCHGSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 219 FCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 258

[Close]

BLAST of CsGy5G015610 vs. Swiss-Prot
Match: sp|P51133|UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 4.1e-110
Identity = 200/276 (72.46%), Postives = 231/276 (83.70%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTD--SNDFRSAGFFHTFPIRPHFDRN 60
           MLR+A R+LSS ++     T +SS   + N    TD  S+  RS        +   F   
Sbjct: 1   MLRIAGRKLSSSAA-----TRSSSAFFTRNPFTFTDDSSSPARSPS---PASLASQFLDQ 60

Query: 61  SRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVL 120
            RGF+S++++   +  LV D+PAT+AA+KNP+SKIVYD+ NHER+PPGDPSKRAFAYFVL
Sbjct: 61  FRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVL 120

Query: 121 SGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRR 180
           +GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIRR
Sbjct: 121 TGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRR 180

Query: 181 RTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPC 240
           RTEEDI LANSVD+G+LRDPQQD ERVK+PEWLVV+GVCTHLGCIPLPNAGDFGGWFCPC
Sbjct: 181 RTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPC 240

Query: 241 HGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           HGSHYD+SGRIRKGPAPYNLEVPTY+F+E+NKLLIG
Sbjct: 241 HGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of CsGy5G015610 vs. Swiss-Prot
Match: sp|P51135|UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 9.1e-110
Identity = 196/274 (71.53%), Postives = 230/274 (83.94%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLR+A R+LSS +++      +SS   + N    TD +   +     T  +   F    R
Sbjct: 1   MLRIAGRKLSSSAAAR-----SSSAFFTRNPFTFTDDSSSPTRSPSPT-SLASQFLDQFR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++   +  LV D+PAT+AA+KNP+SKIVYD+ NHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           +EDI LANSVD+G+LRDPQQD ERVK+PEWLVV+GVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 181 DEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTY+F+E+NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of CsGy5G015610 vs. Swiss-Prot
Match: sp|P37841|UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum OX=4113 GN=FES1 PE=1 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.2e-109
Identity = 201/274 (73.36%), Postives = 230/274 (83.94%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLRVA RRLSS ++         S   S  + D  DS+  RS     +  +   F    R
Sbjct: 1   MLRVAGRRLSSSAARSSSTFFTRS---SFTVTD--DSSPARSP----SPSLTSSFLDQIR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++   +  LV D+PAT+AA+KNP+SKIVYD+ NHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYAS +RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           ++DIKLANSVD+GTLRDPQQD ERVK+PEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 181 DDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 265

[Close]

BLAST of CsGy5G015610 vs. TrEMBL
Match: tr|A0A0A0KNC0|A0A0A0KNC0_CUCSA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G464790 PE=4 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 5.3e-155
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CsGy5G015610 vs. TrEMBL
Match: tr|A0A1S3CP16|A0A1S3CP16_CUCME (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503125 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 2.0e-149
Identity = 263/274 (95.99%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLR+AARRLSSLSSSHFRPTIASSLP SHNIIDSTDSNDFRS GFF+TFPI PHFDRNSR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSTDSNDFRSGGFFNTFPIGPHFDRNSR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL+S KE NLVPDVPAT+AAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALSSMKETNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           EEDIKLANSVDIGTLRDPQQDGERVKDPEWL+VVGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CsGy5G015610 vs. TrEMBL
Match: tr|A0A1S3CPE6|A0A1S3CPE6_CUCME (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503117 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 1.9e-144
Identity = 253/274 (92.34%), Postives = 267/274 (97.45%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLR+AARRLSSLSSSHFRPTIASSLP SHNIIDS DSNDFRSAGFF+TFPIRPHFDRNSR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSADSNDFRSAGFFNTFPIRPHFDRNSR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STK++ L+ D+PAT+AAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLIMDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of CsGy5G015610 vs. TrEMBL
Match: tr|A0A0A0KTT3|A0A0A0KTT3_CUCSA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G464800 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 2.3e-142
Identity = 250/274 (91.24%), Postives = 265/274 (96.72%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60
           MLR+AARRLSSLSSSHFRPTIASS P SHNIIDSTDSNDFRSAGFF+TFPIR  FDR+SR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60

Query: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STK++ L+ D+PAT+AAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           E+DIKLANSVDIG+LRDPQQD ERVKDPEWLVVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of CsGy5G015610 vs. TrEMBL
Match: tr|M5WT51|M5WT51_PRUPE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Prunus persica OX=3760 GN=PRUPE_3G313800 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 2.0e-122
Identity = 225/277 (81.23%), Postives = 247/277 (89.17%), Query Frame = 0


Query: 1   MLRVAARRLSSLSSSHFRP---TIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDR 60
           MLRVAARRL SLS+S +RP     ASS  LS N+ID  DS+D   + +F T      F  
Sbjct: 1   MLRVAARRLCSLSASPWRPNQAATASSSVLSRNLIDGRDSSDDLRSIYFTT-----DFYL 60

Query: 61  NSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
            SRGFASD+LT +K+NNLVPDVP T+AAVKNPTSKIVYD+YNHER+PPGDPSKRAFAYFV
Sbjct: 61  PSRGFASDSLTPSKDNNLVPDVPPTVAAVKNPTSKIVYDDYNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180
           L+GGRFVYASLIRLLVLKFVLSMSASKDVLA+ASLEVDLSSIEPGATVTVKWRGKPVFIR
Sbjct: 121 LTGGRFVYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCP 240
           RRT++DIKLANSVD+ +LRDPQQD ERVK+PEWL+VVGVCTHLGCIPLPNAGDFGGWFCP
Sbjct: 181 RRTDDDIKLANSVDVNSLRDPQQDAERVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYDVSGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDENKLLIG 272

The following BLAST results are available for this feature:

BLAST of CsGy5G015610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143762.1	8.0e-155	100.00	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
XP_008465508.1	2.9e-149	95.99	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
XP_008465498.1	2.9e-144	92.34	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
XP_004143763.1	3.5e-142	91.24	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
XP_023550035.1	1.5e-140	90.61	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita pepo sub...	[more]

BLAST of CsGy5G015610 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13440.1	1.8e-108	71.07	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT5G13430.1	3.4e-107	70.91	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT4G03280.1	7.3e-09	38.96	photosynthetic electron transfer C	[more]

BLAST of CsGy5G015610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P51132\|UCRI2_TOBAC	1.2e-112	73.55	Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum OX=...	[more]
sp\|P49729\|UCRI1_TOBAC	3.1e-110	84.09	Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana ...	[more]
sp\|P51133\|UCRI3_TOBAC	4.1e-110	72.46	Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum OX=...	[more]
sp\|P51135\|UCRI5_TOBAC	9.1e-110	71.53	Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum OX=...	[more]
sp\|P37841\|UCRI_SOLTU	1.2e-109	73.36	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum OX=41...	[more]

BLAST of CsGy5G015610 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KNC0\|A0A0A0KNC0_CUCSA	5.3e-155	100.00	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659...	[more]
tr\|A0A1S3CP16\|A0A1S3CP16_CUCME	2.0e-149	95.99	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A1S3CPE6\|A0A1S3CPE6_CUCME	1.9e-144	92.34	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A0A0KTT3\|A0A0A0KTT3_CUCSA	2.3e-142	91.24	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659...	[more]
tr\|M5WT51\|M5WT51_PRUPE	2.0e-122	81.23	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Prunus persica OX=3760 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors
GO:0051537	2 iron, 2 sulfur cluster binding
GO:0016491	oxidoreductase activity
GO:0008121	ubiquinol-cytochrome-c reductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR014349	Rieske_Fe-S_prot
IPR036922	Rieske_2Fe-2S_sf
IPR006317	Ubiquinol_cyt_c_Rdtase_Fe-S-su
IPR017941	Rieske_2Fe-2S
IPR004192	Rieske_TM
IPR005805	Rieske_Fe-S_prot_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respiratory chain
cellular_component	GO:0016020	membrane
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G015610.1	CsGy5G015610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 212..223 score: 68.96 coord: 234..246 score: 71.54 coord: 246..258 score: 69.81
IPR004192	Cytochrome b-c1 complex subunit Rieske, transmembrane domain	PFAM	PF02921	UCR_TM	coord: 98..145 e-value: 3.4E-11 score: 43.3
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 157..260 e-value: 4.0E-12 score: 45.8
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 184..272 score: 18.805
IPR006317	Ubiquinol-cytochrome c reductase, iron-sulphur subunit	TIGRFAM	TIGR01416	TIGR01416	coord: 130..274 e-value: 2.3E-55 score: 185.3
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	G3DSA:2.102.10.10		coord: 146..274 e-value: 3.9E-55 score: 187.3
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	SSF50022	ISP domain	coord: 136..273
None	No IPR available	PANTHER	PTHR10134:SF17	SUBFAMILY NOT NAMED	coord: 1..274
None	No IPR available	CDD	cd03470	Rieske_cytochrome_bc1	coord: 151..274 e-value: 3.22555E-84 score: 249.784
None	No IPR available	SUPERFAMILY	SSF81502	ISP transmembrane anchor	coord: 85..147
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 1..274

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G015610	Cla005925	Watermelon (97103) v1	cgybwmB383
CsGy5G015610	Csa5G464790	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G015610	ClCG01G007840	Watermelon (Charleston Gray)	cgybwcgB334
CsGy5G015610	CSPI05G15870	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G015610	CmaCh04G022210	Cucurbita maxima (Rimu)	cgybcmaB651
CsGy5G015610	CmaCh15G008110	Cucurbita maxima (Rimu)	cgybcmaB613
CsGy5G015610	CmoCh04G023220	Cucurbita moschata (Rifu)	cgybcmoB631
CsGy5G015610	CmoCh15G008360	Cucurbita moschata (Rifu)	cgybcmoB588
CsGy5G015610	Lsi09G008270	Bottle gourd (USVL1VR-Ls)	cgyblsiB296
CsGy5G015610	Cp4.1LG01g19250	Cucurbita pepo (Zucchini)	cgybcpeB629
CsGy5G015610	Cp4.1LG13g05930	Cucurbita pepo (Zucchini)	cgybcpeB602
CsGy5G015610	MELO3C005102.2	Melon (DHL92) v3.6.1	cgybmedB303
CsGy5G015610	CsaV3_5G024910	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G015610	Cla97C01G008170	Watermelon (97103) v2	cgybwmbB321

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G015610	Melon (DHL92) v3.5.1	cgybmeB303
CsGy5G015610	Silver-seed gourd	carcgybB0485
CsGy5G015610	Silver-seed gourd	carcgybB0816
CsGy5G015610	Wax gourd	cgybwgoB429