CmaCh15G008110 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G008110
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Cytochrome b-c1 complex subunit Rieske, mitochondrial
Location	Cma_Chr15 : 4085780 .. 4089381 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATATTGCTCATGCAACTCCCGCGAATCGGGGGAAAAAGACCGGTTCTTTTCTTCCTTCGCCTCCTCCTGAATTCTCATTATCCTTCGAAATCCAAGCCTCCTTCTCAATTCATTTCTGCATAACGAAAAGGTGGACGAAGATGTTGAGGATTGCGGCTCGAAGGTTCTCCTCACTCTCTTCTTCGCATTTCAGGCCCACTATTGCCTCTTCTTTGCCCGGTTCTCATAAGATCGTCGATTCCGGTGATTCCAATGATTTCAGATCCGGTGGATTCTTCAACACCTTCCCATCCGGACCTCACTTTGATCGCAGTTGTAGAGGTTAGGACTTGGTTCTTTATTTCTGGATTTCTTTTTGTTCTTCCTGCTCGTGGTCGATTCATTTCGTTTTTTAGGTTGTTTTGTCGCGATGCGATGTCCTGTTCGCTTTTTGAAAGGGCAATCCTTATTCAGTATTTGATTTGCTGCTTCTTCACTTGCTTGTGTTGCAATTATCGTAGATGTGGATCGATATTCATCTTTGATGATCCACTGTTTGATTTCTTTGATGATTGAATCATGCTTTTGCTTATTAGTTTCTCGTTTGGAAAATAATGTCAAAATGTGAACTGTGTTTTTTGGTATTCTCGGCGCATTTTAACGATATCATCTTCACCGAAACAATCGCTTTCTTCTTCGTTGGCAGTGTTTTTTGAATTGATTCCTGTAAAAGCTCACCATTATCAGTATGGGATCTTCATTACCAATTTTTTCCTGCTGTTTGTAGGATATAATTTATTGTTTTTGAAAGAGTCTGGTTGTTATCTACAAAGTTTAAGCCATTGTCTTCCCCATGTAGAGTGTTTTTGTTACTATTGGGATGAGTTTGATCAACTGCTTGAATTAGAATATACCATCAACATAATTTGCTAGCAGTATTTTATATTATTCTACGAGAAATAGAGATGTTTTTTTGATCAATTAATCTACGCAACAGATAAGAAGGTACGGGGGGATTATTGATCCTGTTACATGTATAAAATAATGTAGAACTAGCATAAGAAAAAATGAACTAGGCTATAGGGAATTCCAGAAGCATCCATTCATAAGAATTTCTCTTTTTCAGTATTGTAACGTCTTTCAATTAGTTTGTTTCAGCATCCTTTCAGAAGTGTAGGTCTTTTCTTTGGAGATCCTCTGGTTTCTTTCTTTCTAGGTGTGAGATCCCATATTGATTAGGGAGTAGAACAAAGTATTTTTTATAAGGGTGTGAAAATTTCTTCTTAGCAGACGCATTTTAAAAACCTTGAGGAGAAGCCCGAAAGGGAAAGCCCAAAGAGCACAATATCTGCTAGCGGTGGGTTTGGGCTGTTATAAATAGTATCAGAGCAGGACACCGGGCGATATGCCAACGAGGAGGTTGAACCCCGATGGGGGTGGACATGAGGCGATGTGCCAGCAAGGACGCTGGCCCCCAAAGGGGGATGGATTGGGGGGGTCTCACATCGAGTGGAGAAGGGAACGAGTGTCAGCGTCCCTGGATCCTGAAGAGGGATGGATGGTGAGATCCCACATCGGTTAGGGAGGAAAATGAAGCATTCTTTGAGGGGAAGCCCCAAAGGGAAAGCTTAAAGAAGACAATATCTGCTAACAGTGGGGTTGGGTTGTTACACTAGGTTTCTCTAAAGATCGAGCCACACATCTCCTCATAAATCTAGCTTTTTCTCTCAAGGCTTCTAAAAGCTACTCCAAAACTGACTCTGGAGTGCACAAAGTCAGGCCAAAATGCCTTACAATTCGACCCCAACCACAGACATAGGAGGAATAGGTGCTCTGGATGTTCTTCTCCCCTTAATCACAAACTGCGGGCGGATGTCGATAGATTCCAATTTCCAAGCTTCCTTTGTATTCTGTCATGGGTATTCAAGCTTTTGTAAGCAAGACTCTAAAGGAAGGCTTTTACCTTGTTTGGGATTTGGAGCTTGTAGGATGTTTCAGACAACTGTATGAAATCTGATCTTGTTGAAGAAACCCCAGATTTCTCAAGGGACCAGCAAGCTTTGTCCATACCATCTCCCAGCCTTATAGTAACAATCAATTCTATCAACCCAATACAACTTTCAATTTCTCTATCCATTATATCTCTTCTGAAGTCAAGATTCCAATCATTGTTCTCCAAGTTGCGGTACTCTTCAACCGTTTTTCTGAGATATAAGGAAGCGATCGGGGAATGGATGCTACCCATTTGTCTCTCCAGAGCCCTTGCTCTTTTTCGCCTTGAAGTTTTTGAATTTGAAGAAAAACACACTATTTCTTGCAATGTCGAACCGAGGTTTGTCTTTTGATATACCTTTTGGTGGAAGGGAAGCCCGCCCTAAAGGCGCACACCTGCCAACACTAAAGATAATCCTTTGTGAAATAGCTTCACAGTTTCTGCTAAAAAAAAAAAAAGATTGGATCACTTTAGTCGAATTCCATTGGCCCTGAAATTCGAACTCACGTTGAAAATCCTTAAAATTTGCTCTAGAAATTAGGCATAGCAAGAACAATTACACAATGCTTTTGTTATCTTGAGGATTGATCTTCTATGCCTCTGCAATGCATCAAACTACTTTATGAAACAACTAATTCAGATCAAGTTTTATCATGACTAATTGTGGGGCTTTACTCCCTAGCTTTGTTTGAAAGTCGAGGATAGAAATATTGGTAAGAAATCTACACTGGAAATGGTTTAGAGGCCTGCTTTTTTATATATAGTGGCATTTTATAGTTCGGTTTTATGTCGGATACTTAAAATTAAACATCGAAAAGGCTACTATATGGTTTTGATTTGGAATCTGTCTTTAACAATTACTTAAATCGTTTGAAGGCCGAGCATGAGCTTTTCGATTATAATTTGTGATTCGACACTCTATGCAAGACTGTTTCTTTTCCTGTCTGGCGTGGTTTCATGATTTTATGAAATGACTCTGCTAGGTTTTGCTTCTGATGCATTGACCTCAACTAAGGATGATGGCTTAATTTTGGATATTCCTGCAACTGTAGCTGCCATTAAGAACCCTTCTTCAAAGATCGTCTACGACGAATACAATCACGAGCGATTTCCTCCTGGTGACCCCAGCAAGCGTGCATTTGCATATTTTGTGTTATCAGGTGGTCGGTTTGTCTATGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTTAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCCTCACTCGAGGTTGACCTTTCAAGTATCGAGCCTGGTTCTACCGTCACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGACGCCGAACTGAGGACGATATTAAGTTAGCAAATAGTGTGGACATTGAATCTCTTCGTGACCCGCAGCAGGACGAAGAGAGAGTTAAAAATCCAGAGTGGCTTATCGTGGTCGGTGTCTGCACGCATCTTGGTTGCATTCCCTTGCCAAATGCTGGCGATTACGGTGGGTGGTTCTGTCCATGCCATGGTTCCCATTACGATATCTCCGGTAGGATCCGTAAAGGACCAGCACCATACAATTTGGAGGTACCTACCTACACCTTCTTGGATGAAAACAAGCTTTTGATCGGTTAA

mRNA sequence

TATATATTGCTCATGCAACTCCCGCGAATCGGGGGAAAAAGACCGGTTCTTTTCTTCCTTCGCCTCCTCCTGAATTCTCATTATCCTTCGAAATCCAAGCCTCCTTCTCAATTCATTTCTGCATAACGAAAAGGTGGACGAAGATGTTGAGGATTGCGGCTCGAAGGTTCTCCTCACTCTCTTCTTCGCATTTCAGGCCCACTATTGCCTCTTCTTTGCCCGGTTCTCATAAGATCGTCGATTCCGGTGATTCCAATGATTTCAGATCCGGTGGATTCTTCAACACCTTCCCATCCGGACCTCACTTTGATCGCAGTTGTAGAGGTTTTGCTTCTGATGCATTGACCTCAACTAAGGATGATGGCTTAATTTTGGATATTCCTGCAACTGTAGCTGCCATTAAGAACCCTTCTTCAAAGATCGTCTACGACGAATACAATCACGAGCGATTTCCTCCTGGTGACCCCAGCAAGCGTGCATTTGCATATTTTGTGTTATCAGGTGGTCGGTTTGTCTATGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTTAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCCTCACTCGAGGTTGACCTTTCAAGTATCGAGCCTGGTTCTACCGTCACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGACGCCGAACTGAGGACGATATTAAGTTAGCAAATAGTGTGGACATTGAATCTCTTCGTGACCCGCAGCAGGACGAAGAGAGAGTTAAAAATCCAGAGTGGCTTATCGTGGTCGGTGTCTGCACGCATCTTGGTTGCATTCCCTTGCCAAATGCTGGCGATTACGGTGGGTGGTTCTGTCCATGCCATGGTTCCCATTACGATATCTCCGGTAGGATCCGTAAAGGACCAGCACCATACAATTTGGAGGTACCTACCTACACCTTCTTGGATGAAAACAAGCTTTTGATCGGTTAA

Coding sequence (CDS)

ATGTTGAGGATTGCGGCTCGAAGGTTCTCCTCACTCTCTTCTTCGCATTTCAGGCCCACTATTGCCTCTTCTTTGCCCGGTTCTCATAAGATCGTCGATTCCGGTGATTCCAATGATTTCAGATCCGGTGGATTCTTCAACACCTTCCCATCCGGACCTCACTTTGATCGCAGTTGTAGAGGTTTTGCTTCTGATGCATTGACCTCAACTAAGGATGATGGCTTAATTTTGGATATTCCTGCAACTGTAGCTGCCATTAAGAACCCTTCTTCAAAGATCGTCTACGACGAATACAATCACGAGCGATTTCCTCCTGGTGACCCCAGCAAGCGTGCATTTGCATATTTTGTGTTATCAGGTGGTCGGTTTGTCTATGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTTAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCCTCACTCGAGGTTGACCTTTCAAGTATCGAGCCTGGTTCTACCGTCACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGACGCCGAACTGAGGACGATATTAAGTTAGCAAATAGTGTGGACATTGAATCTCTTCGTGACCCGCAGCAGGACGAAGAGAGAGTTAAAAATCCAGAGTGGCTTATCGTGGTCGGTGTCTGCACGCATCTTGGTTGCATTCCCTTGCCAAATGCTGGCGATTACGGTGGGTGGTTCTGTCCATGCCATGGTTCCCATTACGATATCTCCGGTAGGATCCGTAAAGGACCAGCACCATACAATTTGGAGGTACCTACCTACACCTTCTTGGATGAAAACAAGCTTTTGATCGGTTAA

Protein sequence

MLRIAARRFSSLSSSHFRPTIASSLPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFDRSCRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG

Homology

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BLAST of CmaCh15G008110 vs. Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.3e-111
Identity = 206/276 (74.64%), Postives = 232/276 (84.06%), Query Frame = 1


Query: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIVDSGD-SNDFRSGGFFNTFPS-GPHFDRS 60
           MLRIA RR SSLS    R  + S  P S   + +   S+D  S    +  PS    F   
Sbjct: 1   MLRIAGRRASSLS----RWPVRSVAPSSSAFISANHFSSDDDSSSPRSISPSLASVFLHH 60

Query: 61  CRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVL 120
            RGF+S++++   D GL+ D+P TVAAIKNP+SKIVYDE+NHER+PPGDPSKRAFAYFVL
Sbjct: 61  TRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVL 120

Query: 121 SGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRR 180
           +GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRR
Sbjct: 121 TGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRR 180

Query: 181 RTEDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPC 240
           RTEDDI LANSVD+ SLRDPQQD ERVK+PEWL+V+GVCTHLGCIPLPNAGD+GGWFCPC
Sbjct: 181 RTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPC 240

Query: 241 HGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 275
           HGSHYDISGRIRKGPAPYNLEVPTY+FL+ENKLLIG
Sbjct: 241 HGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

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BLAST of CmaCh15G008110 vs. Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 5.3e-110
Identity = 205/274 (74.82%), Postives = 228/274 (83.21%), Query Frame = 1


Query: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFDRSCR 60
           MLR+A RR   LSSS  R +       S  + D  DS+  RS     T      F    R
Sbjct: 1   MLRVAGRR---LSSSAARSSSTFFTRSSFTVTD--DSSPARSPSPSLT----SSFLDQIR 60

Query: 61  GFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++     GL+ D+PATVAAIKNPSSKIVYD+ NHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYAS +RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           +DDIKLANSVD+ +LRDPQQD ERVKNPEWL+VVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 DDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 275
           SHYDISGRIRKGPAPYNLEVPTY+FL+ENKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 265

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BLAST of CmaCh15G008110 vs. Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 4.5e-109
Identity = 195/256 (76.17%), Postives = 221/256 (86.33%), Query Frame = 1


Query: 21  IASSLPGSHKIVDSGD-SNDFRSGGFFNTFPS-GPHFDRSCRGFASDALTSTKDDGLILD 80
           + S+ P S   + +   S+D  S    +  PS    F    RGF+S++++   D GL+ D
Sbjct: 3   VRSAAPSSSAFISANHFSSDDDSSSPRSISPSLASVFLHHTRGFSSNSVSPAHDMGLVPD 62

Query: 81  IPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVL 140
           +P TVAAIKNP+SKIVYDE+NHER+PPGDPSKRAFAYFVL+GGRFVYASL+RLL+LKFVL
Sbjct: 63  LPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFVL 122

Query: 141 SMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDIESLRDP 200
           SMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRTEDDI LANSVD+ SLRDP
Sbjct: 123 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDP 182

Query: 201 QQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNL 260
           QQD ERVKNPEWL+V+GVCTHLGCIPLPNAGD+GGWFCPCHGSHYDISGRIRKGPAPYNL
Sbjct: 183 QQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNL 242

Query: 261 EVPTYTFLDENKLLIG 275
           EVPTY+FL+ENKLLIG
Sbjct: 243 EVPTYSFLEENKLLIG 258

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BLAST of CmaCh15G008110 vs. Swiss-Prot
Match: UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.7e-108
Identity = 184/214 (85.98%), Postives = 205/214 (95.79%), Query Frame = 1


Query: 61  GFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++   D GL+ D+P TVAAIKNP+SKIVYDE+NHER+PPGDPSKRAFAYFVL+G
Sbjct: 23  GFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTG 82

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 83  GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 142

Query: 181 EDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDI LANSVD+ SLRDPQQD ERVK+PEWL+V+GVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 143 EDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 202

Query: 241 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 275
           SHYDISGRIRKGPAPYNLEVPTY+FL+ENKLLIG
Sbjct: 203 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 236

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BLAST of CmaCh15G008110 vs. Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 1.7e-108
Identity = 195/274 (71.17%), Postives = 224/274 (81.75%), Query Frame = 1


Query: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFDRSCR 60
           MLRIA R+ SS +++       +  P +     S  +         + F          R
Sbjct: 1   MLRIAGRKLSSSAATRSSSAFFTRNPFTFTDDSSSPARSPSPASLASQFLD------QFR 60

Query: 61  GFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++     GL+ D+PATVAAIKNPSSKIVYD+ NHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           E+DI LANSVD+ SLRDPQQD ERVKNPEWL+V+GVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 275
           SHYDISGRIRKGPAPYNLEVPTY+F++ENKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

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BLAST of CmaCh15G008110 vs. TrEMBL
Match: A0A0A0KTT3_CUCSA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_5G464800 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 1.1e-141
Identity = 251/274 (91.61%), Postives = 259/274 (94.53%), Query Frame = 1


Query: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFDRSCR 60
           MLRIAARR SSLSSSHFRPTIASS P SH I+DS DSNDFRS GFFNTFP    FDR  R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60

Query: 61  GFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STKDDGLILDIPATVAA+KNPSSKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIKLANSVDI SLRDPQQDEERVK+PEWL+VVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of CmaCh15G008110 vs. TrEMBL
Match: A0A0A0KNC0_CUCSA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_5G464790 PE=4 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 2.9e-139
Identity = 242/274 (88.32%), Postives = 262/274 (95.62%), Query Frame = 1


Query: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFDRSCR 60
           MLR+AARR SSLSSSHFRPTIASSLP SH I+DS DSNDFRS GFF+TFP  PHFDR+ R
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60

Query: 61  GFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALTSTK++ L+ D+PAT+AA+KNP+SKIVYDEYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           E+DIKLANSVDI +LRDPQQD ERVK+PEWL+VVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CmaCh15G008110 vs. TrEMBL
Match: M5WT51_PRUPE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Prunus persica GN=PRUPE_ppa009909mg PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.3e-118
Identity = 217/277 (78.34%), Postives = 240/277 (86.64%), Query Frame = 1


Query: 1   MLRIAARRFSSLSSSHFRPT---IASSLPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFDR 60
           MLR+AARR  SLS+S +RP     ASS   S  ++D  DS+D     +F T      F  
Sbjct: 1   MLRVAARRLCSLSASPWRPNQAATASSSVLSRNLIDGRDSSDDLRSIYFTT-----DFYL 60

Query: 61  SCRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFV 120
             RGFASD+LT +KD+ L+ D+P TVAA+KNP+SKIVYD+YNHER+PPGDPSKRAFAYFV
Sbjct: 61  PSRGFASDSLTPSKDNNLVPDVPPTVAAVKNPTSKIVYDDYNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           L+GGRFVYASLIRLLVLKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LTGGRFVYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240
           RRT+DDIKLANSVD+ SLRDPQQD ERVKNPEWLIVVGVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTDDDIKLANSVDVNSLRDPQQDAERVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 275
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFLDENKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDENKLLIG 272

[Close]

BLAST of CmaCh15G008110 vs. TrEMBL
Match: V4U2T2_9ROSI (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Citrus clementina GN=CICLE_v10016224mg PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 3.7e-118
Identity = 213/279 (76.34%), Postives = 241/279 (86.38%), Query Frame = 1


Query: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIVDSGDSN-----DFRSGGFFNTFPSGPHF 60
           MLR+AARR  S SSS     IASS      I++  DS+     DFRS GF+ +   GP F
Sbjct: 1   MLRVAARRLLSPSSSSSLRPIASS----RNIINGADSSSSSNDDFRSNGFYGSGYLGPQF 60

Query: 61  DRSCRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAY 120
              CRGF+S++LT   ++ L+  +PATVAA+KNP+SKIVYDEYNHER+PPGDPSKRAFAY
Sbjct: 61  QLPCRGFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAY 120

Query: 121 FVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVF 180
           FVL+GGRFVYASLIRLL+LKFVLSMSASKDVLA+ASLEVDLSSIEPGSTVTVKWRGKPVF
Sbjct: 121 FVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVF 180

Query: 181 IRRRTEDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWF 240
           IRRRTE+DIKLAN+VD+ SLRDPQQD ERVKNPEWL+VVGVCTHLGCIPLPNAGD+GGWF
Sbjct: 181 IRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWF 240

Query: 241 CPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 275
           CPCHGSHYDISGRIRKGPAPYNLEVP+Y+FLDENK++IG
Sbjct: 241 CPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMIIG 275

[Close]

BLAST of CmaCh15G008110 vs. TrEMBL
Match: W9QM11_9ROSA (Cytochrome b-c1 complex subunit Rieske-2 OS=Morus notabilis GN=L484_007559 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 4.8e-118
Identity = 222/283 (78.45%), Postives = 241/283 (85.16%), Query Frame = 1


Query: 1   MLRIAARRFSSLSSSHF--RP------TIASSLPGSHKIVDSGDSNDFRSGGFFNTFPS- 60
           MLR+AARR SSLSS+    RP      + ASSL   H I  S DS+         +FPS 
Sbjct: 1   MLRVAARRLSSLSSTDSLRRPNYSAAISTASSLLSPHPINASADSSSDDLP--LRSFPSL 60

Query: 61  GPHFDRSCRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKR 120
            PHF    RGFASD+LT +K+  L+LD+PATVAA+KNP+SKI YDEYNHER+PPGDPSKR
Sbjct: 61  TPHFHIPSRGFASDSLTPSKEHNLVLDVPATVAAVKNPTSKIEYDEYNHERYPPGDPSKR 120

Query: 121 AFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRG 180
           AFAYFVL+GGRFVYASLIRLL+LKFVLSMSASKDVLA+ASLE DLSSIEPGSTVTVKWRG
Sbjct: 121 AFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEADLSSIEPGSTVTVKWRG 180

Query: 181 KPVFIRRRTEDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDY 240
           KPVFIRRRTEDDIKLANSVD+ SLRDPQ D ERVKNPEWL+VVGVCTHLGCIPLPNAGD+
Sbjct: 181 KPVFIRRRTEDDIKLANSVDLNSLRDPQPDAERVKNPEWLVVVGVCTHLGCIPLPNAGDF 240

Query: 241 GGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 275
           GGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG
Sbjct: 241 GGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 281

[Close]

BLAST of CmaCh15G008110 vs. TAIR10
Match: AT5G13440.1 (AT5G13440.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 393.3 bits (1009), Expect = 1.2e-109
Identity = 200/277 (72.20%), Postives = 226/277 (81.59%), Query Frame = 1


Query: 1   MLRIAARRFSSLSSSHFRPTIASS--LPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFDRS 60
           MLR+A RR  S+S    R + A+S  L   H + D G+S+            S   + RS
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVLSRDHTLSDGGNSSSASRSVPSADLSSFNSYHRS 60

Query: 61  C-RGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFV 120
             RGFAS  +T   + G   ++PATV A+K P+SKIVYD++NHER+PPGDPSKRAFAYFV
Sbjct: 61  VIRGFASQVITQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDIKLANSVD+ SLRDPQ+D  RVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP
Sbjct: 181 RRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 275
           CHGSHYDISGRIRKGPAPYNLEVPTY+FL+ENKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 274

[Close]

BLAST of CmaCh15G008110 vs. TAIR10
Match: AT5G13430.1 (AT5G13430.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 386.7 bits (992), Expect = 1.2e-107
Identity = 198/277 (71.48%), Postives = 224/277 (80.87%), Query Frame = 1


Query: 1   MLRIAARRFSSLSSSHFRPTIASSLPGS--HKIVDSGDSNDFRSGGFFNTFPSGPHFDRS 60
           MLR+A RR  S+S    R + A+S   S  H + D G  +        +   S  H  RS
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVVSRDHTLSDGGGDSSSAPRSLPSADLSSYH--RS 60

Query: 61  C-RGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFV 120
             RGF+S  L    + G   ++PATV A+K P+SKIVYD++NHER+PPGDPSKRAFAYFV
Sbjct: 61  LIRGFSSQVLAQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           LSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240
           RRTEDDIKLANSVD+ SLRDPQ+D  RVKNPEWL+VVGVCTHLGCIPLPNAGDYGGWFCP
Sbjct: 181 RRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 275
           CHGSHYDISGRIRKGPAPYNLEVPTY+FL+ENKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of CmaCh15G008110 vs. TAIR10
Match: AT4G03280.1 (AT4G03280.1 photosynthetic electron transfer C)

HSP 1 Score: 58.2 bits (139), Expect = 9.5e-09
Identity = 28/71 (39.44%), Postives = 40/71 (56.34%), Query Frame = 1


Query: 205 VKNPEWLIVVG---VCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVP 264
           V+N + L   G   VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP +L + 
Sbjct: 142 VENDKTLATYGINAVCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAPLSLALA 201

Query: 265 TYTFLDENKLL 273
                +  K+L
Sbjct: 202 HADIDEAGKVL 211

[Close]

BLAST of CmaCh15G008110 vs. NCBI nr
Match: gi|659072408|ref|XP_008465498.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 521.5 bits (1342), Expect = 8.6e-145
Identity = 254/274 (92.70%), Postives = 264/274 (96.35%), Query Frame = 1


Query: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFDRSCR 60
           MLRIAARR SSLSSSHFRPTIASSLPGSH I+DS DSNDFRS GFFNTFP  PHFDR+ R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSADSNDFRSAGFFNTFPIRPHFDRNSR 60

Query: 61  GFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STKDDGLI+DIPATVAA+KNPSSKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLIMDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIKLANSVDI SLRDPQQDEERVK+PEWL+VVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of CmaCh15G008110 vs. NCBI nr
Match: gi|659072410|ref|XP_008465508.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 511.5 bits (1316), Expect = 8.9e-142
Identity = 248/274 (90.51%), Postives = 263/274 (95.99%), Query Frame = 1


Query: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFDRSCR 60
           MLRIAARR SSLSSSHFRPTIASSLPGSH I+DS DSNDFRSGGFFNTFP GPHFDR+ R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSTDSNDFRSGGFFNTFPIGPHFDRNSR 60

Query: 61  GFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL+S K+  L+ D+PATVAA+KNP+SKIVYDEYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALSSMKETNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           E+DIKLANSVDI +LRDPQQD ERVK+PEWLIVVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CmaCh15G008110 vs. NCBI nr
Match: gi|449452030|ref|XP_004143763.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 510.8 bits (1314), Expect = 1.5e-141
Identity = 251/274 (91.61%), Postives = 259/274 (94.53%), Query Frame = 1


Query: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFDRSCR 60
           MLRIAARR SSLSSSHFRPTIASS P SH I+DS DSNDFRS GFFNTFP    FDR  R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60

Query: 61  GFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDAL STKDDGLILDIPATVAA+KNPSSKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           EDDIKLANSVDI SLRDPQQDEERVK+PEWL+VVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of CmaCh15G008110 vs. NCBI nr
Match: gi|449452028|ref|XP_004143762.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 502.7 bits (1293), Expect = 4.1e-139
Identity = 242/274 (88.32%), Postives = 262/274 (95.62%), Query Frame = 1


Query: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFDRSCR 60
           MLR+AARR SSLSSSHFRPTIASSLP SH I+DS DSNDFRS GFF+TFP  PHFDR+ R
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDSNDFRSAGFFHTFPIRPHFDRNSR 60

Query: 61  GFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALTSTK++ L+ D+PAT+AA+KNP+SKIVYDEYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180

Query: 181 EDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240
           E+DIKLANSVDI +LRDPQQD ERVK+PEWL+VVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of CmaCh15G008110 vs. NCBI nr
Match: gi|595939955|ref|XP_007215798.1| (hypothetical protein PRUPE_ppa009909mg [Prunus persica])

HSP 1 Score: 434.1 bits (1115), Expect = 1.8e-118
Identity = 217/277 (78.34%), Postives = 240/277 (86.64%), Query Frame = 1


Query: 1   MLRIAARRFSSLSSSHFRPT---IASSLPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFDR 60
           MLR+AARR  SLS+S +RP     ASS   S  ++D  DS+D     +F T      F  
Sbjct: 1   MLRVAARRLCSLSASPWRPNQAATASSSVLSRNLIDGRDSSDDLRSIYFTT-----DFYL 60

Query: 61  SCRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFV 120
             RGFASD+LT +KD+ L+ D+P TVAA+KNP+SKIVYD+YNHER+PPGDPSKRAFAYFV
Sbjct: 61  PSRGFASDSLTPSKDNNLVPDVPPTVAAVKNPTSKIVYDDYNHERYPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180
           L+GGRFVYASLIRLLVLKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LTGGRFVYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEDDIKLANSVDIESLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240
           RRT+DDIKLANSVD+ SLRDPQQD ERVKNPEWLIVVGVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTDDDIKLANSVDVNSLRDPQQDAERVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 275
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFLDENKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLDENKLLIG 272

The following BLAST results are available for this feature:

BLAST of CmaCh15G008110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UCRI2_TOBAC	1.3e-111	74.64	Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=...	[more]
UCRI_SOLTU	5.3e-110	74.82	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FE...	[more]
UCRI1_TOBAC	4.5e-109	76.17	Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana ...	[more]
UCRI4_TOBAC	1.7e-108	85.98	Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum PE=...	[more]
UCRI3_TOBAC	1.7e-108	71.17	Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=...	[more]

BLAST of CmaCh15G008110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTT3_CUCSA	1.1e-141	91.61	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_...	[more]
A0A0A0KNC0_CUCSA	2.9e-139	88.32	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_...	[more]
M5WT51_PRUPE	1.3e-118	78.34	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Prunus persica GN=PRUPE...	[more]
V4U2T2_9ROSI	3.7e-118	76.34	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Citrus clementina GN=CI...	[more]
W9QM11_9ROSA	4.8e-118	78.45	Cytochrome b-c1 complex subunit Rieske-2 OS=Morus notabilis GN=L484_007559 PE=4 ...	[more]

BLAST of CmaCh15G008110 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13440.1	1.2e-109	72.20	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT5G13430.1	1.2e-107	71.48	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT4G03280.1	9.5e-09	39.44	photosynthetic electron transfer C	[more]

BLAST of CmaCh15G008110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072408\|ref\|XP_008465498.1\|	8.6e-145	92.70	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
gi\|659072410\|ref\|XP_008465508.1\|	8.9e-142	90.51	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
gi\|449452030\|ref\|XP_004143763.1\|	1.5e-141	91.61	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
gi\|449452028\|ref\|XP_004143762.1\|	4.1e-139	88.32	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
gi\|595939955\|ref\|XP_007215798.1\|	1.8e-118	78.34	hypothetical protein PRUPE_ppa009909mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004192	Rieske_TM
IPR005805	Rieske_Fe-S_prot_C
IPR006317	Ubiquinol_cyt_c_Rdtase_Fe-S-su
IPR014349	Rieske_Fe-S_prot
IPR017941	Rieske_2Fe-2S

Vocabulary: **Molecular Function**
Term	Definition
GO:0008121	ubiquinol-cytochrome-c reductase activity
GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors
GO:0051537	2 iron, 2 sulfur cluster binding
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	hydrogen ion transmembrane transport
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respiratory chain
cellular_component	GO:0045275	respiratory chain complex III
cellular_component	GO:0016020	membrane
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G008110.1	CmaCh15G008110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004192	Ubiquinol cytochrome reductase, transmembrane domain	GENE3D	G3DSA:1.20.5.270		coord: 98..134 score: 5.
IPR004192	Ubiquinol cytochrome reductase, transmembrane domain	PFAM	PF02921	UCR_TM	coord: 97..145 score: 3.3
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 234..246 score: 3.2E-17coord: 246..258 score: 3.2E-17coord: 212..223 score: 3.2
IPR006317	Ubiquinol-cytochrome c reductase, iron-sulphur subunit	TIGRFAMs	TIGR01416	TIGR01416	coord: 130..274 score: 1.3
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 2..274 score: 8.7E
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	GENE3D	G3DSA:2.102.10.10		coord: 135..273 score: 5.9
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 157..260 score: 9.8
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROFILE	PS51296	RIESKE	coord: 204..272 score: 17
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	unknown	SSF50022	ISP domain	coord: 136..272 score: 4.58
None	No IPR available	PANTHER	PTHR10134:SF1	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 2..274 score: 8.7E
None	No IPR available	unknown	SSF81502	ISP transmembrane anchor	coord: 85..147 score: 5.67

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G008110	Cucsa.033600	Cucumber (Gy14) v1	cgycmaB0014
CmaCh15G008110	Cla005925	Watermelon (97103) v1	cmawmB278
CmaCh15G008110	Csa5G464790	Cucumber (Chinese Long) v2	cmacuB303
CmaCh15G008110	MELO3C005102	Melon (DHL92) v3.5.1	cmameB252
CmaCh15G008110	ClCG01G007840	Watermelon (Charleston Gray)	cmawcgB260
CmaCh15G008110	CSPI05G15870	Wild cucumber (PI 183967)	cmacpiB308
CmaCh15G008110	CmoCh04G023220	Cucurbita moschata (Rifu)	cmacmoB309
CmaCh15G008110	CmoCh15G008360	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G008110	Lsi09G008270	Bottle gourd (USVL1VR-Ls)	cmalsiB268
CmaCh15G008110	Cp4.1LG13g05930	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G008110	Cp4.1LG01g19250	Cucurbita pepo (Zucchini)	cmacpeB318
CmaCh15G008110	MELO3C005102.2	Melon (DHL92) v3.6.1	cmamedB286
CmaCh15G008110	CsaV3_5G024910	Cucumber (Chinese Long) v3	cmacucB0357
CmaCh15G008110	Cla97C01G008170	Watermelon (97103) v2	cmawmbB289
CmaCh15G008110	Bhi12G000947	Wax gourd	cmawgoB0376
CmaCh15G008110	CsGy5G015610	Cucumber (Gy14) v2	cgybcmaB613

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh15G008110	CmaCh04G022210	Cucurbita maxima (Rimu)	cmacmaB325

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G008110	Silver-seed gourd	carcmaB0664
CmaCh15G008110	Silver-seed gourd	carcmaB1148
CmaCh15G008110	Wax gourd	cmawgoB0367