Cla97C01G008170 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G008170
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Cytochrome b-c1 complex subunit Rieske, mitochondrial
Location	Cla97Chr01 : 8402718 .. 8406192 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGGATTGCGGCACGAAGGCTTTCTTCACTCTCTTCTTCCCATTTCAGGCCCACTATTGCCTCTTCTTTGCCCAGTTCTCACAAGATCATCGATGGTTCTGATTCCGCCCCTTCCAATGATTTCAGATCCTTCAACACCTTCCCTTTTGGACCCCACTTTGATCGTAACTGTAGAGGTTAGAGTTCGCTTCCGTATTCTATGAAATAATTTTGTTATTTCTGGCTGTAGTTGATTTATGGCGTTTTTTAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGCTAGAAAGGGAAATCCTTGTTTAGTGTTTTTGAGTTGTAGTTTTGTCACTTGCTTGTGTAGCTATCATTGGGTTTAGCTGTAGATGGGGATCGGGAATTGTGTTTATTGATCTGCTGTTTAGTCGCATTGATTATGTTGAATCATGTTTTGGATATTCATTTCTCGTTTGTGATAATAATGTGAAAAAGTGAGAGTGGGGTTGTGTTTTTGGGGGATATCACTTAGCCGAAGCAATCACTTCCTCGTGGTGTCTATGTTTGAATCTTCAACTGATTATTTTCTTAGTCTTTAACTTGTTATTACCATCATGTTTGCATATCCGTTTCTCATTCTGGCAACATTGAGAACGTGAAATGTTATTTACATTATGTATTTTTGCAGCAATATGATGGATCCCTTTGCTGAAGCAATCTCTAATTTTTTATTCCTAATTCTTTCACCGTTGCTCTCCAAAATTTTTAACTTTATGTTTGGTGGTCTACCACCCGAAACTGTATGCTTTTGTTCATATACTATACTTCCGAGACTTGTACTTCTCTCTATCTCTTTTAAAATTTTTCGTCTTTTTGATTGTGGAGACGCACACATGAACTAAAGAGCTGATGTTTCAAATGGTACATGGTTTTTGGTAATTTGATTTTGGTTGCTCTGGTGGCCTCTTTGAGTGTGTAAGTTTAAGTGTGACTTGTGAGAGTTATATTTCTTCTTTTTCTAATGGAGGTTAAAATTAGTCAGTTTAAGCATTTAAGGTTTCTGTTTGTTCGGTGCTGATAAAATTGTGCATTAATCCATTTTGCATACTCACCAAATCTTGATCAATGGATGTTAAGAAAATAGGCTTAATGTTCTTTTTGTTCGTATTGGTACAAGATTACAAAAGGAGTCTAAGACTAGCCGAAGAGACCTATCTTCAAAAGATGTATCATTTCGTTCGGTCCATAAGTGCCACAGTAACACTCTAGTGCACAACTACCCAAAATCCTAGCTTTGCCCATCAAGTTCCAACCATTAAGACCTTCAAGGAGCCAATCATCAATTATTCGAGGAGAAACAACATCAAACCCAACTTCTCAAAATAAAGCTCTAGGCCTTATAAGCTAAAGAGCAATGGAGAAACAAGTGGTAACATCTGTTGGATCACATCATCAGTATTAAGGCTTCTAAAAGACATAGACCAGACAAGGACTTCAACTTTCGTAGGGCACTTACTTTTCCAGACTAACTTGGGGGGGGGGGGGGGTGTCATAGTTAGTACCAACTACAATTTTTTTTTATCCCCATCATTTTTAAGCTTGAAAATGATCTAGATATAGGCAAAGATAAAACAATGTTAAGATTTTCTTGGATTCAAAACAGATAGATTTTATCATTTGCGTGTCAAAAGTGAATTATCTCCTTGCCACGTGGAGAACCCTAACTAGACTTTTGTCCATACTTGTTAATACTGGCCTGCTGAGGACACACTACCATGAGGAAGAGGAGGGGAATGAGAGACCTCCTTGTCTAACACCCTTAATAGTTCTAGGAAGAACTCTCCTCAGCTATCAGCCAGTACCTTCACAACAATCGTATACAAGCTAGTAACCAAGCTGATTGGTTTGTGAAACCCTTCACACTTAGAGCATATTCCTTTCTTGGACATAAGACAAATATTGGTTTCATCCTCTAAATTAGCACTTCTCATGAAACTCACTACCTAACTTAACCGAAATCTCTCTTGATCAAATCTCAATCTTTTGGATCAAATGCCAGAGTGGAACCATCATGCTTGAGATCCTTACTATTTATTGTAATTTGTCGTCAAAGCTGAAATAATCTCTCTTTATCTTTTCAACATAGAAGAAGCCTCTAACCTTTCCTTCCACAAACCTAGAGTAAACAGAAACAGAACCAAAAAAAAGTAGAGGAAGACAAGTTTTCCCCCTTAATTGCTGCCCCCTCGATCCGGTGTGTCATCCTCTCCTGAAAGAGACTCAATGACGTTCCTATTTCTTCTAATCTTGCAACTTCATGGTAGAATGAAGTGCTACGATCTCCCTCTCTCCCATTTTAACCCTAGAGAAATAGATACTCTCCCTCTCTAACTAATTCCTCAAACTTCCCCTTACCTGCACTTCTCTGAACTCTTCACTAAGAGTACCAAGGATAACTAATTTCTTAAGTTTTGCTTGAATGAAATAATGAAGAAATGACCACACTCCTAGGAAAATGGCATCCTGTAGTCTTGAATGCATAAAGAAAATATAATTGTTTATGAAAAAGCTTCAAACTTACTGCCTAGAATTTGTCAAAAGCTTAACCCTGCATATAGGTTATGGTTACAAACTCATTCAAACTTAAACACAGAAAATCACTAAATTTTGCACCAATAAGCAGGCAGCATAAATTTGAGGAAGATCTTGAGCATTCTGGCTCAGGTGATTGATTGGATGATTTCTTTTATATATTTTGTAACTCAGCCCTTTTATTATGAGTGATTATTCCTTTCTCTTGTGGTGAAGTATTATGATTTTATAGAAATATCTCTTTGCTAGGTTTTGCTTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTCCTGCTACTGTAGCAGCCGTTAAGAACCCTACTTCAAAGATAGTCTATGATGAATACAATCATGAGCGATTTCCTCCTGGTGACCCCAGCAAGCGGGCATTTGCTTATTTTGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAGGACGTTCTTGCCCTTGCCTCACTTGAGGTTGACCTCTCAAGCATTGAGCCTGGTGCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTATTCATCAGAAGACGAACAGAGGAAGATATTAAGTTAGCAAATAGTGTCGATGTCGGATCTCTTCGTGACCCACAGCAGGATGGTGAGAGAGTTAAGGACCCAGAATGGCTTATTGTGATTGGCGTCTGCACACATCTTGGTTGCATTCCCTTGCCAAATGCTGGTGACTTTGGTGGGTGGTTTTGCCCATGCCATGGTTCCCATTACGATGTCTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAA

mRNA sequence

ATGTTGAGGATTGCGGCACGAAGGCTTTCTTCACTCTCTTCTTCCCATTTCAGGCCCACTATTGCCTCTTCTTTGCCCAGTTCTCACAAGATCATCGATGGTTCTGATTCCGCCCCTTCCAATGATTTCAGATCCTTCAACACCTTCCCTTTTGGACCCCACTTTGATCGTAACTGTAGAGGTTTTGCTTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTCCTGCTACTGTAGCAGCCGTTAAGAACCCTACTTCAAAGATAGTCTATGATGAATACAATCATGAGCGATTTCCTCCTGGTGACCCCAGCAAGCGGGCATTTGCTTATTTTGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAGGACGTTCTTGCCCTTGCCTCACTTGAGGTTGACCTCTCAAGCATTGAGCCTGGTGCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTATTCATCAGAAGACGAACAGAGGAAGATATTAAGTTAGCAAATAGTGTCGATGTCGGATCTCTTCGTGACCCACAGCAGGATGGTGAGAGAGTTAAGGACCCAGAATGGCTTATTGTGATTGGCGTCTGCACACATCTTGGTTGCATTCCCTTGCCAAATGCTGGTGACTTTGGTGGGTGGTTTTGCCCATGCCATGGTTCCCATTACGATGTCTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAA

Coding sequence (CDS)

ATGTTGAGGATTGCGGCACGAAGGCTTTCTTCACTCTCTTCTTCCCATTTCAGGCCCACTATTGCCTCTTCTTTGCCCAGTTCTCACAAGATCATCGATGGTTCTGATTCCGCCCCTTCCAATGATTTCAGATCCTTCAACACCTTCCCTTTTGGACCCCACTTTGATCGTAACTGTAGAGGTTTTGCTTCTGATGCATTGACTTCAACAAAGGAAAACAACTTAGTTCCAGATGTTCCTGCTACTGTAGCAGCCGTTAAGAACCCTACTTCAAAGATAGTCTATGATGAATACAATCATGAGCGATTTCCTCCTGGTGACCCCAGCAAGCGGGCATTTGCTTATTTTGTCTTGTCAGGTGGTCGGTTTGTCTATGCTTCTTTGATCCGTCTCCTTGTTCTCAAGTTTGTTCTTAGCATGTCTGCCAGTAAGGACGTTCTTGCCCTTGCCTCACTTGAGGTTGACCTCTCAAGCATTGAGCCTGGTGCTACTGTGACGGTTAAGTGGCGTGGAAAACCAGTATTCATCAGAAGACGAACAGAGGAAGATATTAAGTTAGCAAATAGTGTCGATGTCGGATCTCTTCGTGACCCACAGCAGGATGGTGAGAGAGTTAAGGACCCAGAATGGCTTATTGTGATTGGCGTCTGCACACATCTTGGTTGCATTCCCTTGCCAAATGCTGGTGACTTTGGTGGGTGGTTTTGCCCATGCCATGGTTCCCATTACGATGTCTCCGGTAGGATCCGTAAAGGACCAGCACCCTACAATTTGGAGGTACCTACTTACACCTTTTTGGAAGATAACAAGCTTTTGATTGGTTAA

Protein sequence

MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRSFNTFPFGPHFDRNCRGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG

Homology

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BLAST of Cla97C01G008170 vs. NCBI nr
Match: XP_022992734.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 534.3 bits (1375), Expect = 2.5e-148
Identity = 260/274 (94.89%), Postives = 268/274 (97.81%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRSFNTFPFGPHFDRNCR 60
           MLRIAARR SSLSSSHFRPTIASSLP SHKIIDG DSA SNDFRSFNTFPFGP FDRNCR
Sbjct: 1   MLRIAARRFSSLSSSHFRPTIASSLPGSHKIIDGGDSASSNDFRSFNTFPFGPIFDRNCR 60

Query: 61  GFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GFASDALTSTKE +LVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           E+DIKLANSVD+GSLRDPQQDGERVKDPEWLIV+GVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 274

[Close]

BLAST of Cla97C01G008170 vs. NCBI nr
Match: XP_023550035.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 534.3 bits (1375), Expect = 2.5e-148
Identity = 262/277 (94.58%), Postives = 270/277 (97.47%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFR---SFNTFPFGPHFDR 60
           MLRIAARRLSSLSSSHFRPTIASSLP SHKIIDG DSAPSNDFR   SFNTFPFGP FDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDR 60

Query: 61  NCRGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           NCRGFASDALTSTKE +LVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTE+DIKLANSVD+GSLRDPQQDGERVKDPEWLIV+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 277

[Close]

BLAST of Cla97C01G008170 vs. NCBI nr
Match: XP_022938899.1 (cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 531.2 bits (1367), Expect = 2.1e-147
Identity = 261/277 (94.22%), Postives = 269/277 (97.11%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFR---SFNTFPFGPHFDR 60
           MLRIAARRLSSLSSSHFRPTIASSLP SHKIIDG DSAPSNDFR   SFNTFPFGP FDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDR 60

Query: 61  NCRGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           NCRGFASDALTSTKE +LVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTE+DIKLANSVD+GSLRDPQQD ERVKDPEWLIV+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 277

[Close]

BLAST of Cla97C01G008170 vs. NCBI nr
Match: XP_004143762.1 (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis sativus] >KGN51130.1 hypothetical protein Csa_5G464790 [Cucumis sativus])

HSP 1 Score: 518.5 bits (1334), Expect = 1.4e-143
Identity = 257/277 (92.78%), Postives = 265/277 (95.67%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRS---FNTFPFGPHFDR 60
           MLR+AARRLSSLSSSHFRPTIASSLP SH IID +D   SNDFRS   F+TFP  PHFDR
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTD---SNDFRSAGFFHTFPIRPHFDR 60

Query: 61  NCRGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           N RGFASDALTSTKENNLVPDVPAT+AAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTEEDIKLANSVD+G+LRDPQQDGERVKDPEWL+V+GVCTHLGCIPLPNAGDFGGWFCP
Sbjct: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of Cla97C01G008170 vs. NCBI nr
Match: XP_008465508.1 (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 518.1 bits (1333), Expect = 1.9e-143
Identity = 258/277 (93.14%), Postives = 264/277 (95.31%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRS---FNTFPFGPHFDR 60
           MLRIAARRLSSLSSSHFRPTIASSLP SH IID +D   SNDFRS   FNTFP GPHFDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSTD---SNDFRSGGFFNTFPIGPHFDR 60

Query: 61  NCRGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           N RGFASDAL+S KE NLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALSSMKETNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTEEDIKLANSVD+G+LRDPQQDGERVKDPEWLIV+GVCTHLGCIPLPNAGDFGGWFCP
Sbjct: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of Cla97C01G008170 vs. TrEMBL
Match: tr|A0A0A0KNC0|A0A0A0KNC0_CUCSA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G464790 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 9.4e-144
Identity = 257/277 (92.78%), Postives = 265/277 (95.67%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRS---FNTFPFGPHFDR 60
           MLR+AARRLSSLSSSHFRPTIASSLP SH IID +D   SNDFRS   F+TFP  PHFDR
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTD---SNDFRSAGFFHTFPIRPHFDR 60

Query: 61  NCRGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           N RGFASDALTSTKENNLVPDVPAT+AAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 181 RRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTEEDIKLANSVD+G+LRDPQQDGERVKDPEWL+V+GVCTHLGCIPLPNAGDFGGWFCP
Sbjct: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of Cla97C01G008170 vs. TrEMBL
Match: tr|A0A1S3CP16|A0A1S3CP16_CUCME (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503125 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 1.2e-143
Identity = 258/277 (93.14%), Postives = 264/277 (95.31%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRS---FNTFPFGPHFDR 60
           MLRIAARRLSSLSSSHFRPTIASSLP SH IID +D   SNDFRS   FNTFP GPHFDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSTD---SNDFRSGGFFNTFPIGPHFDR 60

Query: 61  NCRGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           N RGFASDAL+S KE NLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALSSMKETNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTEEDIKLANSVD+G+LRDPQQDGERVKDPEWLIV+GVCTHLGCIPLPNAGDFGGWFCP
Sbjct: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of Cla97C01G008170 vs. TrEMBL
Match: tr|A0A1S3CPE6|A0A1S3CPE6_CUCME (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503117 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 1.3e-137
Identity = 247/277 (89.17%), Postives = 260/277 (93.86%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRS---FNTFPFGPHFDR 60
           MLRIAARRLSSLSSSHFRPTIASSLP SH II   DSA SNDFRS   FNTFP  PHFDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNII---DSADSNDFRSAGFFNTFPIRPHFDR 60

Query: 61  NCRGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           N RGFASDAL STK++ L+ D+PATVAAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALASTKDDGLIMDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTE+DIKLANSVD+GSLRDPQQD ERVKDPEWL+V+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of Cla97C01G008170 vs. TrEMBL
Match: tr|A0A0A0KTT3|A0A0A0KTT3_CUCSA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G464800 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 1.0e-134
Identity = 242/277 (87.36%), Postives = 258/277 (93.14%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRS---FNTFPFGPHFDR 60
           MLRIAARRLSSLSSSHFRPTIASS P+SH IID +D   SNDFRS   FNTFP    FDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTD---SNDFRSAGFFNTFPIRSQFDR 60

Query: 61  NCRGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120
           + RGFASDAL STK++ L+ D+PATVAAVKNP+SKIVYD+YNHERFPPGDPSKRAFAYFV
Sbjct: 61  HSRGFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFV 120

Query: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 181 RRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 240
           RRTE+DIKLANSVD+GSLRDPQQD ERVKDPEWL+V+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCP 240

Query: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CHGSHYDVSGRIRKGPAPYNLEVPTY+FLE NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of Cla97C01G008170 vs. TrEMBL
Match: tr|A0A2P4NA31|A0A2P4NA31_QUESU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_65089 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 5.3e-123
Identity = 224/279 (80.29%), Postives = 246/279 (88.17%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRP--TIASSLPSSHKIIDGSDSAPSNDFRSFNT---FPFGPHF 60
           MLR+AAR+LSSLSS  +RP    ASS   S   I+G DS+ S D RS  +   F FGP F
Sbjct: 1   MLRVAARKLSSLSSPPWRPNQVQASSALVSRHFINGGDSSSSGDPRSSGSAYFFSFGPDF 60

Query: 61  DRNCRGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAY 120
               RGFAS++LT  KEN +VPDVPATVAAVKNPTSKIVYDEYNHER+PPGDPSKRAFAY
Sbjct: 61  HAPFRGFASESLTPMKENGIVPDVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAY 120

Query: 121 FVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVF 180
           FVL+GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVF
Sbjct: 121 FVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVF 180

Query: 181 IRRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWF 240
           IRRRTEEDIKLANSVD+ SLRDPQ D +RVK+PEWLIV+GVCTHLGCIPLPNAGDFGGWF
Sbjct: 181 IRRRTEEDIKLANSVDISSLRDPQPDSDRVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWF 240

Query: 241 CPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CPCHGSHYD+SGRIRKGPAPYNLEVPTYTFLE+NKL++G
Sbjct: 241 CPCHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLMVG 279

[Close]

BLAST of Cla97C01G008170 vs. Swiss-Prot
Match: sp|P51132|UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.0e-113
Identity = 206/276 (74.64%), Postives = 231/276 (83.70%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRSFNTF--PFGPHFDRN 60
           MLRIA RR SSLS    R  + S  PSS   I  +  +  +D  S  +        F  +
Sbjct: 1   MLRIAGRRASSLS----RWPVRSVAPSSSAFISANHFSSDDDSSSPRSISPSLASVFLHH 60

Query: 61  CRGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVL 120
            RGF+S++++   +  LVPD+P TVAA+KNPTSKIVYDE+NHER+PPGDPSKRAFAYFVL
Sbjct: 61  TRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVL 120

Query: 121 SGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRR 180
           +GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIRR
Sbjct: 121 TGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRR 180

Query: 181 RTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPC 240
           RTE+DI LANSVD+GSLRDPQQD ERVK PEWL+VIGVCTHLGCIPLPNAGDFGGWFCPC
Sbjct: 181 RTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPC 240

Query: 241 HGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           HGSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 241 HGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of Cla97C01G008170 vs. Swiss-Prot
Match: sp|P49729|UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 8.3e-111
Identity = 194/256 (75.78%), Postives = 221/256 (86.33%), Query Frame = 0


Query: 21  IASSLPSSHKIIDGSDSAPSNDFRSFNTF--PFGPHFDRNCRGFASDALTSTKENNLVPD 80
           + S+ PSS   I  +  +  +D  S  +        F  + RGF+S++++   +  LVPD
Sbjct: 3   VRSAAPSSSAFISANHFSSDDDSSSPRSISPSLASVFLHHTRGFSSNSVSPAHDMGLVPD 62

Query: 81  VPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVL 140
           +P TVAA+KNPTSKIVYDE+NHER+PPGDPSKRAFAYFVL+GGRFVYASL+RLL+LKFVL
Sbjct: 63  LPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFVL 122

Query: 141 SMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDVGSLRDP 200
           SMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIRRRTE+DI LANSVD+GSLRDP
Sbjct: 123 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDP 182

Query: 201 QQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNL 260
           QQD ERVK+PEWL+VIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYD+SGRIRKGPAPYNL
Sbjct: 183 QQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNL 242

Query: 261 EVPTYTFLEDNKLLIG 275
           EVPTY+FLE+NKLLIG
Sbjct: 243 EVPTYSFLEENKLLIG 258

[Close]

BLAST of Cla97C01G008170 vs. Swiss-Prot
Match: sp|P51133|UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.4e-110
Identity = 202/274 (73.72%), Postives = 229/274 (83.58%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRSFNTFPFGPHFDRNCR 60
           MLRIA R+LS  SS+  R + A    +     D S    S+  RS +       F    R
Sbjct: 1   MLRIAGRKLS--SSAATRSSSAFFTRNPFTFTDDS----SSPARSPSPASLASQFLDQFR 60

Query: 61  GFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++   +  LV D+PATVAA+KNP+SKIVYD+ NHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           EEDI LANSVD+GSLRDPQQD ERVK+PEWL+VIGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 181 EEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTY+F+E+NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of Cla97C01G008170 vs. Swiss-Prot
Match: sp|P51135|UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 3.1e-110
Identity = 201/274 (73.36%), Postives = 229/274 (83.58%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSSHKIIDGSDSAPSNDFRSFNTFPFGPHFDRNCR 60
           MLRIA R+LS  SS+  R + A    +     D S    S+  RS +       F    R
Sbjct: 1   MLRIAGRKLS--SSAAARSSSAFFTRNPFTFTDDS----SSPTRSPSPTSLASQFLDQFR 60

Query: 61  GFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++   +  LV D+PATVAA+KNP+SKIVYD+ NHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 180

Query: 181 EEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           +EDI LANSVD+GSLRDPQQD ERVK+PEWL+VIGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 181 DEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTY+F+E+NKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of Cla97C01G008170 vs. Swiss-Prot
Match: sp|P51134|UCRI4_TOBAC (Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 7.0e-110
Identity = 185/214 (86.45%), Postives = 204/214 (95.33%), Query Frame = 0


Query: 61  GFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 120
           GF+S++++   +  LVPD+P TVAA+KNPTSKIVYDE+NHER+PPGDPSKRAFAYFVL+G
Sbjct: 23  GFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTG 82

Query: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRT 180
           GRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIRRRT
Sbjct: 83  GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRT 142

Query: 181 EEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 240
           E+DI LANSVD+GSLRDPQQD ERVK PEWL+VIGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 143 EDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHG 202

Query: 241 SHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           SHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 203 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 236

[Close]

BLAST of Cla97C01G008170 vs. TAIR10
Match: AT5G13440.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 397.9 bits (1021), Expect = 5.1e-111
Identity = 204/282 (72.34%), Postives = 228/282 (80.85%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASS--LPSSHKIIDG------SDSAPSNDFRSFNTFPFG 60
           MLR+A RRL S+S    R + A+S  L   H + DG      S S PS D  SFN++   
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVLSRDHTLSDGGNSSSASRSVPSADLSSFNSY--- 60

Query: 61  PHFDRNCRGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRA 120
                  RGFAS  +T   E     +VPATV AVK P SKIVYD++NHER+PPGDPSKRA
Sbjct: 61  --HRSVIRGFASQVITQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRA 120

Query: 121 FAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGK 180
           FAYFVLSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG TVTVKWRGK
Sbjct: 121 FAYFVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGK 180

Query: 181 PVFIRRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFG 240
           PVFIRRRTE+DIKLANSVDVGSLRDPQ+D  RVK+PEWLIV+GVCTHLGCIPLPNAGD+G
Sbjct: 181 PVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDYG 240

Query: 241 GWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           GWFCPCHGSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 241 GWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 274

[Close]

BLAST of Cla97C01G008170 vs. TAIR10
Match: AT5G13430.1 (Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 390.6 bits (1002), Expect = 8.1e-109
Identity = 200/279 (71.68%), Postives = 225/279 (80.65%), Query Frame = 0


Query: 1   MLRIAARRLSSLSSSHFRPTIASSLPSS--HKIIDG---SDSAPSNDFRSFNTFPFGPHF 60
           MLR+A RRL S+S    R + A+S   S  H + DG   S SAP    RS  +     + 
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVVSRDHTLSDGGGDSSSAP----RSLPSADLSSYH 60

Query: 61  DRNCRGFASDALTSTKENNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAY 120
               RGF+S  L    E     +VPATV AVK P SKIVYD++NHER+PPGDPSKRAFAY
Sbjct: 61  RSLIRGFSSQVLAQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAY 120

Query: 121 FVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVF 180
           FVLSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG TVTVKWRGKPVF
Sbjct: 121 FVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVF 180

Query: 181 IRRRTEEDIKLANSVDVGSLRDPQQDGERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWF 240
           IRRRTE+DIKLANSVDVGSLRDPQ+D  RVK+PEWL+V+GVCTHLGCIPLPNAGD+GGWF
Sbjct: 181 IRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWF 240

Query: 241 CPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 275
           CPCHGSHYD+SGRIRKGPAPYNLEVPTY+FLE+NKLLIG
Sbjct: 241 CPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of Cla97C01G008170 vs. TAIR10
Match: AT4G03280.1 (photosynthetic electron transfer C)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-08
Identity = 25/57 (43.86%), Postives = 34/57 (59.65%), Query Frame = 0


Query: 216 VCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLL 273
           VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP +L +      E  K+L
Sbjct: 156 VCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAPLSLALAHADIDEAGKVL 211

The following BLAST results are available for this feature:

BLAST of Cla97C01G008170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022992734.1	2.5e-148	94.89	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita maxima]	[more]
XP_023550035.1	2.5e-148	94.58	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita pepo sub...	[more]
XP_022938899.1	2.1e-147	94.22	cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucurbita moschata...	[more]
XP_004143762.1	1.4e-143	92.78	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
XP_008465508.1	1.9e-143	93.14	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]

BLAST of Cla97C01G008170 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KNC0\|A0A0A0KNC0_CUCSA	9.4e-144	92.78	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659...	[more]
tr\|A0A1S3CP16\|A0A1S3CP16_CUCME	1.2e-143	93.14	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A1S3CPE6\|A0A1S3CPE6_CUCME	1.3e-137	89.17	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A0A0KTT3\|A0A0A0KTT3_CUCSA	1.0e-134	87.36	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus OX=3659...	[more]
tr\|A0A2P4NA31\|A0A2P4NA31_QUESU	5.3e-123	80.29	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Quercus suber OX=58331 ...	[more]

BLAST of Cla97C01G008170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P51132\|UCRI2_TOBAC	1.0e-113	74.64	Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum OX=...	[more]
sp\|P49729\|UCRI1_TOBAC	8.3e-111	75.78	Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana ...	[more]
sp\|P51133\|UCRI3_TOBAC	1.4e-110	73.72	Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum OX=...	[more]
sp\|P51135\|UCRI5_TOBAC	3.1e-110	73.36	Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum OX=...	[more]
sp\|P51134\|UCRI4_TOBAC	7.0e-110	86.45	Cytochrome b-c1 complex subunit Rieske-4, mitochondrial OS=Nicotiana tabacum OX=...	[more]

BLAST of Cla97C01G008170 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13440.1	5.1e-111	72.34	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT5G13430.1	8.1e-109	71.68	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT4G03280.1	1.6e-08	43.86	photosynthetic electron transfer C	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors
GO:0016491	oxidoreductase activity
GO:0051537	2 iron, 2 sulfur cluster binding
GO:0008121	ubiquinol-cytochrome-c reductase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR014349	Rieske_Fe-S_prot
IPR006317	Ubiquinol_cyt_c_Rdtase_Fe-S-su
IPR017941	Rieske_2Fe-2S
IPR036922	Rieske_2Fe-2S_sf
IPR004192	Rieske_TM
IPR005805	Rieske_Fe-S_prot_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:1902600	hydrogen ion transmembrane transport
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0015992	proton transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0070469	respiratory chain
cellular_component	GO:0045275	respiratory chain complex III
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G008170.1	Cla97C01G008170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 234..246 score: 71.54 coord: 212..223 score: 67.29 coord: 246..258 score: 69.81
IPR004192	Cytochrome b-c1 complex subunit Rieske, transmembrane domain	PFAM	PF02921	UCR_TM	coord: 97..145 e-value: 3.3E-11 score: 43.4
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	G3DSA:2.102.10.10		coord: 146..274 e-value: 3.6E-55 score: 187.4
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	SSF50022	ISP domain	coord: 136..273
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 157..260 e-value: 2.3E-11 score: 43.3
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 204..272 score: 18.28
IPR006317	Ubiquinol-cytochrome c reductase, iron-sulphur subunit	TIGRFAM	TIGR01416	TIGR01416	coord: 130..274 e-value: 1.9E-55 score: 185.5
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 1..274
None	No IPR available	PANTHER	PTHR10134:SF17	SUBFAMILY NOT NAMED	coord: 1..274
None	No IPR available	CDD	cd03470	Rieske_cytochrome_bc1	coord: 151..274 e-value: 2.62396E-84 score: 250.169
None	No IPR available	SUPERFAMILY	SSF81502	ISP transmembrane anchor	coord: 85..147

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G008170	Cla005925	Watermelon (97103) v1	wmwmbB236
Cla97C01G008170	Csa5G464790	Cucumber (Chinese Long) v2	cuwmbB338
Cla97C01G008170	MELO3C005102	Melon (DHL92) v3.5.1	mewmbB009
Cla97C01G008170	ClCG01G007840	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G008170	CSPI05G15870	Wild cucumber (PI 183967)	cpiwmbB351
Cla97C01G008170	Cucsa.033600	Cucumber (Gy14) v1	cgywmbB006
Cla97C01G008170	CmaCh04G022210	Cucurbita maxima (Rimu)	cmawmbB705
Cla97C01G008170	CmaCh15G008110	Cucurbita maxima (Rimu)	cmawmbB289
Cla97C01G008170	CmoCh04G023220	Cucurbita moschata (Rifu)	cmowmbB676
Cla97C01G008170	CmoCh15G008360	Cucurbita moschata (Rifu)	cmowmbB271
Cla97C01G008170	Lsi09G008270	Bottle gourd (USVL1VR-Ls)	lsiwmbB007
Cla97C01G008170	CsGy5G015610	Cucumber (Gy14) v2	cgybwmbB321
Cla97C01G008170	MELO3C005102.2	Melon (DHL92) v3.6.1	medwmbB008
Cla97C01G008170	CsaV3_5G024910	Cucumber (Chinese Long) v3	cucwmbB353

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G008170	Silver-seed gourd	carwmbB0501
Cla97C01G008170	Silver-seed gourd	carwmbB0858
Cla97C01G008170	Wax gourd	wgowmbB057
Cla97C01G008170	Wax gourd	wgowmbB063