Cp4.1LG13g05930 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG13g05930
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Cytochrome b-c1 complex subunit Rieske, mitochondrial
Location	Cp4.1LG13 : 5110131 .. 5118470 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGCAAAAGGGTCAAGAAGAAGAAAATGTAGAGACACGTGTCAAAATGCTCACCGTCTATGCCAAACTAGTATGGGGTCAAATTTCTGCTGCAAATTGGGGGAAAAAGAAGGCGGTTTTGCAGCCACCGTTCCGATCATCCAATTCCCTCGAAACCCTGTTTTTTTCTGTTCCATTTTTTTTTTCCGGCGGAAGTTTACGATTTTTCTTGACCAAGATGTTGCGGATTGCGGCGAGAAGGCTCTCTTCACTCTCTTCCTCCCATTTCAGGCCCACTATTGCCTCTTCTTTGCCTGGTTCTCACAAGATCATCGATGGCGGTGATTCCGCCCCTTCCAATGATTTCAGATCCGTCACCTCCTTCAACACCTTCCCTTTTGGACCCTTCTTCGATCGTAATTGTAGAGGTTGGAATTTGTTTGTTTCTCGTTTCTGGTTTTAATCGATTTATGACGTTTTTTAGGGCTTGATTTTGTGGACATGTGTTGCCTTTTTTGTTGCTTGAAAGGGAAAATCCTTATTTTATATCTGACTTGCAGTATTGTGTCACTTGCTTGTGTAGCGATACTTGTTTTTTAGCTGTAGATGGTGTTCGATAATCGTCTTTATTGATCTGCTCTATGTAGGCAGCATCAGGATGTTGAATCATGTTTTGCACATTCATTTCTCGTTGTGAAAATAGTGTTTTTGGGGCATATCACTTGGCCGATGCAATGACTTCCTCGTAGTGTTCATGTTTGAATCTTCCACCGTTTATTGTCCAAATCTTTAACTTGTTCTACCATCGTGTTTGCACTGCACATTCATTTTTCATTTTGGATCCATTGAATTGTTATTTACAGCAATAGGATGATATCCCATTGCTGAAGCAACCCCTTCTCTTTGTTTTCCAATTCTTTCACTGTATGCTTTTATATATATGCTATACTGCTGAGACTCGTACTTCTCTAAGGAACTGATGTTTCAAATGGTACAAGGTTTTGGTGGTTCGATTGTGGTTGCTATGGTGTCCACTTCGAGTGTATAAGTTTAAGTGCGAGAGTTGTGTTTCTTCTTCTCTAAGAGAGGTTAGAATCATTCAGTTTAGAGTTTATGTTCTGATAAAGTTCAGTGCATTAATACCTGTTAGAAACTCACCATCCAGGTCCTACAACGAACCGAAAGAATGAGCTTTATATGAAGCTAATCGTTTCAATTCCTCATGCAATACCTGATAGAAAGAAAGAAAAAGCCTTGACCATTTTGGGGTTCTAACCCATCAGAAAAGCAATAGAGGCATATTTCAAGGATGAAGGGTGATGGAGATGAGGACAGAAAGGCAAAGGGGACTAATTCCCACCAACAATTCTCCCTAGTAGTAAATTTTAAGCACTTGAAGAAAGAAAACCAAACAAATTAGCTTCCAAAGGTTCTTGAATGTGCCTTAAACCTCACAAATTGAAAGGTTGCACTCAACTCAATGAGGCCTGTATGCTCGCTAAATGCTACAATCCTATGGCACTATGAAATAGACTCCAAAGGGAACCATAGCACCATTTTGTGAGTAGTTGCATATTCTAAGGTCCTCTGGAAGAATTATATTCGTGCATACTGATCGACCCTTTGGCAAGAAAGAAACAAGAGGATTTTTCAAGATATCTTTTGTAATTTCATACTATCAATGATTTTTTTAATCCCAAATATATATAGCTTCCTTCTCATCTATCTTTCAAACTACTCAAATCACGCTATTGTTAAATGTGGCAATCATTTATTTCGTATTTGTTTCAGCAAAATTGCCGGGCCATTGTGACCCAACTTTTTGGTTTTGGACATTTACTCTGAATCTCTGGTATCTCCTCTATGCACGTTTCTACATTTACTTCTAGGTTCCAACTTTTGAGATCTCTGACAATCAAATGTCATAGAAAATAACCTTTACGTGTGCAACTGATTGGAGTTTCTTTTACTCCCAAACTTTTTGTGAAAGTCGTCGATTGAAACATTGGCTTGAAATTTGTTAGCACTCTGGAAACAGTTTAGAGGCTTGCTTGTTTTCTTGTTTGTAACCTTCAGTGGAGAAGGTGTACTGGCATGTTATGATTTGGTACTCATTAAATGGTTTAGACGTTGGCCATTCTGTTCTAGGTGATTGATTGGATGATTGCTTTTCAATTTTTATTATGTAATTCAGCCCTTTTATTATGAATGATTCTTTCTTTCTCCTACGGTGAAGTTTTATGATTTTATAGAAATAACTCTTTGATAGGTTTTGCTTCTGATGCATTGACTTCAACAAAGGAAACCGACTTAGTTCCAGATGTTCCTGCTACTGTAGCAGCCGTTAAGAACCCTACTTCAAAGATAGTCTACGACGAATACAATCATGAGCGATTTCCTCCGGGTGACCCCAGCAAGCGTGCATTTGCATATTTTGTATTGTCAGGTGGTCGATTTGTCTATGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTCGTCCTTAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCTTCACTTGAGGTTGACCTTTCAAGCATCGAGCCTGGTGCTACCGTGACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGTCGAACTGAGGACGATATTAAGTTAGCAAATAGTGTGGACATTGGATCTCTTCGTGACCCACAGCAGGATGGCGAGAGAGTTAAGGATCCAGAATGGCTTATCGTGGTCGGCGTCTGCACGCATCTTGGCTGCATTCCCTTGCCGAACGCTGGCGATTACGGTGGGTGGTTCTGTCCATGCCATGGTTCCCATTACGATATCTCCGGTAGGATCCGTAAAGGACCAGCACCATACAATTTGGAGGTACCTACCTATACCTTCTTGGATGAGAACAAGCTCTTGATTGGTTAAGAAATCAAGCTCTTTTTCTGGGTCTATAGTGGTTTGGAACCTTCATCAATGATAAGATAATGTCGAAGATCTACTGCTGGCACATATATATACTTTTCTTCCACGCAATTTCTTTGAGTTAATATTTGTGTAATGAGAATACTGTAGCTGTATCTTGGTTGGTGCATGAATGAATCTGAATAAGTTGCTTGAATGGGTGTTGGGACCCATAAGGTGAGATCTTGTGATTTTGTAATTGACTTGATAGTGAAATAGCTACCAAATTTTGATTTATTTTGATTTATTTTGATTTATTTCATTTCATTTCACCATGAAAGCTCGGTTTCTTAACATTATGGTCGAAAATAGGGACAATTTGGGTGAGAAATGTCCTTGCACGTTTTGCCGATATATAGAACGACTAGGGTCGTTCCTCACCTTCCAGATTTGGAGAGACAAGGAAACGTTCTTGTCGTTCTAGGGAATTAATTCTACTTTAATTTCATCTTATGCTGTTCTTGATGCATGGGATAGGCTAAATTAATAAAAATATTTTTAAATTTTATATTTTCTTTAAAAAATAACTTTTAAAAAAATTTAAAAAATATCATCTTAAAAAAAAATATTTAAGAAATTTTGAGAATATTAGTTAAATTTTTTTAATAATAAAAAAATATCTATGAACTTAAATAGTATTTTTTAAATCCTCTTAAAAAGTCAAGGGTCATTTTTAAGCCATTTTAAAATCAAACGATAACTTTTATTCCAAACTAATGGTAAATATATAAATATCATCTTAAAAAAATATTGATGAAAATTTAAAAATATTAGTTAAACTTTTTTAATAATAAAAAAATATCTATAAAATTAATGGTTAAACGGGTAATTTTTAAGTCATTTTAAAAGACAAACTGTAATTTTTATTCAAAACTAATAGTAAATATATAAATATCATCTTAAAAAAATTATTTATGAAATTTTAAGAATATAAAAAAATATCTACAAAATTAATGGTATTTTTTTAAACACTCTTAAAAAGTGAAAGGGTAATTTTTAAGCCATTTTAAAAGTCAAACCGTAATTTTTATTAAAAAATTAATAGTAAATATATTTAAAGTTTAACTGCATTTTTTTAAGTTAATATTTAAATTTTCAAAAGATTAGAAGTATTCTTAAAATAAAATAAATAGTAAAGAGTATTTTTATTAATTTAACTTTAAAATTATAAAATGAAGCGGTGGAGTAAAATAAATATTTTGAAATTACATTAATAAGAATAAAACCTTACTAAAAAAAATCGAAGTATAACGATAGCTGAAGTAAGGTAAACAAGGTTGAGGTCAAATATATATTGCTCATACCACTCCTGCGAATCGGGGGAAGAAGACCGGTTCTGTTCTTCCATCGCCTCCTCTTGAATTCTCAATATCCTTCCAAATCCAACCCTCCTTCTCCATTCATTTCTGCATAACCAAAAGGTGGACGAAGATGTTGAGGATTGCGGCTCGAAGGTTCTCCTCACTCTCTTCTTCGCATTTCAGGCCCACTATTTCCTCTTCTTTCCCCGGTTCTCATAAGATCGTCGATTCCGGTGATTCCAATGATTTCAGATCCGGTGGATTCTTCAACACCTTCCCATCCGGACCTCACTTTGGTCGCAATTGTAGAGGTTAGGACTTGGTTCTTTATTTCTGGATTTCTTTTTGTTCTTCCTGCTCGTGGTCGATTCATTTCGTTTTTTAGGTTGTTTTTGTCGCGATGCGATGTCCTGTTCGCTGTTTGAAAGGGCAATCCTTGTTCAGTTATCGTAGATATGGATCGGTATTCATCTTTGTTGGTCCACTGTTTGATTTCTTTGATGATTTTGAATCATGCTATTGCTTATTAGTTTCTCGTTTTGAAAATAATGTCAAAATGTGAAAGGTGTTTTTTGGTATTCTCGGGGCATTTTAACGATATCATCTTCACCGAAACAATCGCTTTCTTCTTCGTTGGCAGTGTTTTTTGAATTGATTCCTGTAAAAGCTCACCATTATCAATATGGGATCTTCATTACCTATTTTTTCCTGCATTTTGTTGGGTATAATTTATTGTTGTTGAAAGAGTATGGTTGTTATCTACAAAGTTTAAGCCATTGTCTTCCCCATGTAGAGTGTTTTTGTTACTATTGGGATGAGTTTGATCAACTGCTTGAATTTGAATTATACCATCAACATAATTTGCTAGCAGTATTTTAAATTACTCTACGAGAAATAGAGATGTTTTTTGATCAATTAATCTACGCAACAGATAAGAAGGTACGGGGGGATTGTTGATCCTGTTACTTGTATGAAATAATGTAGAACTAGCATAAGAAAAAATGAACTAGGCTATAGGGAATTCCAGAAGCATCCATTCATAAGAATTTCTGTTTTCAGTATTGTAGCGTCTTTCAATTAGTTTGTTTCAGCATCCTTTCAGAAGTGTAGGTCTTTTCTTTGGAGATCCTCCGGTTTCTTTCTTTCTAGGTGTGGAAATTTCTTCTTAGTAGACGCCTTTTAAAAACCTTGAGGAGAAGCCTGAAAGGGAAAGCCCAAAGAGCACAATATTTGCTAGCGGTGGGTTTGGGTTTTTACAAAGGGTATCAGAGCTGGAAGCCGGACACTGGGCGATATACCAGCGAGGAGGTTGAACCCCGAATGGGGGTGGACACGAGGCGGTGTGCCAACAAGGACGTTGGGCCCCGAAGAGGGATGGATTGAGAGGGTCCCATATCGATTGGAGAAGGGAACGAGTGCCAACGAGGACGCTGGACCTCGAAGAGGGATGGATGGTGAGATCCCACATTGGTTGGGAAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGCATTTTAAAAGCCTTGAGGGAAAGCCCAAAGAGAACACTATCGCTTGGGCTAAAGCTTGAGGCACACATCTCCACAAAAATCTAGCTTTAGCTTTTCCTCTAAGGCTTCAAAAAGCCACTCCAAAACTGTCTCTGGAGTGCACAAAGTCAGGCCAAAATGCTGTACAATCTGACCCCAACCTCAGACACTGGAGGAATAGGTGCTCTGGATTTTCTTCTCCCCTTAATCACAAACTCCGAACCGATGTCGATAGATTCCAATTTCCAAGGTTCCTTTGTATTCTGTCATGGGTATTCAAGCTTTTGTAAGCAAGATTCTAAAGGAAAGCTTTTTACATTGTTTGGGACATTAAACTCCCAAATCATAGCAATCCTAGGGAATTTATTTCTCAAGGGACCAGCAAGCTTTGTCCATACCATCTCCCAGCCTTGCAGTATCTATCAATTCTATCAACCCAATCCAACTTTCAAATTCTCTATCCGTTATATCTCTCCTAAAATCAAGATTCCAATCATTGTTCCCCAAGTTGCGGTACTTTCGAACTGTTTTTCTGAGATATAAGGAAAAGATCCGGGAATGAATCCTACCCATTTGTCTCTCCAGAGCCCTGCTCTTTTTTGCCTTGAAGTTTTTGAATTTGAAGAAAAACACACTATTTCTTGCAATGTCGAACCGAGGTTTGTCTTTTGATGTACCTTTTGGTGGAAGGAAAGCCCGCCCTAAAGGCGCACGCCCGGAAACACTAAAGATAATCCTTTGTGAAATAGCTTCACAGTTTCTGCTAAAAAAAAAAGATTGGATCACTTTAGTCGTATTGCATTGGCACTGAAATTCGAACTCACCTTGAAAATCCTTAAAATTTGCTCTAGAAATTAGGCATAGTAAGAACAATTGCACAATGCTTTTGTTATCTTGAGAATTGATCTTCTATGCCTCTGCAATGCATCAAACTGCTTCTTTATGAAACAACTAATTCAGATCAAGTTTTATCACGACTAATTGTGGGGCTTTACTCCCTAGCTTTGTTCGAAAGTCGAGGATAGAAATATTGGTAAGAAATCTACACTGGAAATGGTTTAGAGGCCTGCTTTTTTATATATAGTGGCATTTTATAGTTTGGTTTTATGTCGGATACTTAAAATTAAACATTGAAAAGGCTATTATATCGTTCGGATTTGGAATCTGTCTTTAACGATTACTTGAATCGTTAAAAGGCCGAGCATGAGCTTTTCGATTATAATTTGTGATTCGACACTCTATGCAAGACTGTTTCTTTTTCAGTCTGGCGTGGTTTCATGATCTTATGGAAATGGCTCCGCTAGGTTTTGCTTCTGATGCATTGACCTCAACTAAGGATGATGGCTTAATTCTGGATATCCCTGCAACTGTAGCTGCCATTAAGAACCCTTCTTCAAAGATCGTCTATGACGAATACAATCACGAGCGATTTCCTCCTGGTGACCCCAGCAAGCGTGCATTTGCATATTTTGTATTATCAGGTGGTCGGTTTGTCTATGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTTAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCCTCACTCGAAGTTGACCTTTCAAGTATTGAGCCTGGCTCTACCGTCACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGCCGAACCGAGGACGATATTAAGGTAGCAAATAGTGTGGACATTGGATCTCTTCGTGACCCGCAGCAGGACGAAGAGAGAGTTAAAAATCCAGAGTGGCTTATCGTGGTCGGCGTCTGCACGCATCTTGGTTGCATTCCCTTGCCAAATGCTGGCGATTACGGTGGATGGTTCTGTCCATGCCATGGTTCCCATTACGATATCTCTGGTAGGATCCGTAAAGGACCAGCACCATACAATTTGGAGGTACCTACCTACACCTTCTTGGATGAAAACAAGCTTTTGATCGGTTAAGAAACCGATCTCTTATTTTCGACATAACATAAGAGGTTCGAAACCCTCGAGTTATATCAAAAGCAGATATAAGCTGCAGACATGTTTTGTTTCATTTTAGAAATCTTTATTGCAGTGAGAACACTGTAACACTACTTGACTCATGAATGAATCTAAAATAATTTGACTGAATGAGTGAAAGAGAGAGAGATTAGAAGATCCATGTGGCCATATTGAATTTTGATGCTATGATTCATGTGTTGGAAAATTGTTGTACGAGTTTCAATTCTTTTCCAGAATCTGGACTGATTGAATGTAACTCATGAAGATTCCTACAACTATGGTAAAGAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGATGAACTGATAATAATCATTGCTCAAAAATACCTTTGACATAGACCATGCCCTTTTCACTCAATTGAAGCTCCTTTCTCATTTGCTCTACCTGCTGGTCATCTCCTTGAACAATAATCTCTCCCAGGCTTCCATCTTCTCCAACTATCATTTTAACTTTGATCTCCTCCTTTCTTGATGCTTTCACCCAGTAATATGCTCCTCTGCAGTTTTCCAAGAGCCTCAGATTAGATTATAACGTTCTATCAGATATCTCAAA

mRNA sequence

AGGGCAAAAGGGTCAAGAAGAAGAAAATGTAGAGACACGTGTCAAAATGCTCACCGTCTATGCCAAACTAGTATGGGGTCAAATTTCTGCTGCAAATTGGGGGAAAAAGAAGGCGGTTTTGCAGCCACCGTTCCGATCATCCAATTCCCTCGAAACCCTGTTTTTTTCTGTTCCATTTTTTTTTTCCGGCGGAAGTTTACGATTTTTCTTGACCAAGATGTTGCGGATTGCGGCGAGAAGGCTCTCTTCACTCTCTTCCTCCCATTTCAGGCCCACTATTGCCTCTTCTTTGCCTGGTTCTCACAAGATCATCGATGGCGGTGATTCCGCCCCTTCCAATGATTTCAGATCCGTCACCTCCTTCAACACCTTCCCTTTTGGACCCTTCTTCGATCGTAATTGTAGAGGTTTTGCTTCTGATGCATTGACTTCAACAAAGGAAACCGACTTAGTTCCAGATGTTCCTGCTACTGTAGCAGCCGTTAAGAACCCTACTTCAAAGATAGTCTACGACGAATACAATCATGAGCGATTTCCTCCGGGTGACCCCAGCAAGCGTGCATTTGCATATTTTGTATTGTCAGGTGGTCGATTTGTCTATGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTCGTCCTTAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCTTCACTTGAGGTTGACCTTTCAAGCATCGAGCCTGGTGCTACCGTGACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGTCGAACTGAGGACGATATTAAGTTAGCAAATAGTGTGGACATTGGATCTCTTCGTGACCCACAGCAGGATGGCGAGAGAGTTAAGGATCCAGAATGGCTTATCGTGGTCGGCGTCTGCACGCATCTTGGCTGCATTCCCTTGCCGAACGCTGGCGATTACGGTGGGTGGTTCTGTCCATGCCATGGTTCCCATTACGATATCTCCGGTAGGATCCGTAAAGGACCAGCACCATACAATTTGGAGGTACCTACCTATACCTTCTTGGATGAGAACAAGCTCTTGATTGGTCAAATATATATTGCTCATACCACTCCTGCGAATCGGGGGAAGAAGACCGGTTCTGTTCTTCCATCGCCTCCTCTTGAATTCTCAATATCCTTCCAAATCCAACCCTCCTTCTCCATTCATTTCTGCATAACCAAAAGGTGGACGAAGATGTTGAGGATTGCGGCTCGAAGGTTCTCCTCACTCTCTTCTTCGCATTTCAGGCCCACTATTTCCTCTTCTTTCCCCGGTTCTCATAAGATCGTCGATTCCGGTGATTCCAATGATTTCAGATCCGGTGGATTCTTCAACACCTTCCCATCCGGACCTCACTTTGGTCGCAATTGTAGAGGTTTTGCTTCTGATGCATTGACCTCAACTAAGGATGATGGCTTAATTCTGGATATCCCTGCAACTGTAGCTGCCATTAAGAACCCTTCTTCAAAGATCGTCTATGACGAATACAATCACGAGCGATTTCCTCCTGGTGACCCCAGCAAGCGTGCATTTGCATATTTTGTATTATCAGGTGGTCGGTTTGTCTATGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTTAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCCTCACTCGAAGTTGACCTTTCAAGTATTGAGCCTGGCTCTACCGTCACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGCCGAACCGAGGACGATATTAAGGTAGCAAATAGTGTGGACATTGGATCTCTTCGTGACCCGCAGCAGGACGAAGAGAGAGTTAAAAATCCAGAGTGGCTTATCGTGGTCGGCGTCTGCACGCATCTTGGTTGCATTCCCTTGCCAAATGCTGGCGATTACGGTGGATGGTTCTGTCCATGCCATGGTTCCCATTACGATATCTCTGGTAGGATCCGTAAAGGACCAGCACCATACAATTTGGAGGTACCTACCTACACCTTCTTGGATGAAAACAAGCTTTTGATCGGTTAAGAAACCGATCTCTTATTTTCGACATAACATAAGAGGTTCGAAACCCTCGAGTTATATCAAAAGCAGATATAAGCTGCAGACATGTTTTGTTTCATTTTAGAAATCTTTATTGCAGTGAGAACACTGTAACACTACTTGACTCATGAATGAATCTAAAATAATTTGACTGAATGAGTGAAAGAGAGAGAGATTAGAAGATCCATGTGGCCATATTGAATTTTGATGCTATGATTCATGTGTTGGAAAATTGTTGTACGAGTTTCAATTCTTTTCCAGAATCTGGACTGATTGAATGTAACTCATGAAGATTCCTACAACTATGGTAAAGAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGATGAACTGATAATAATCATTGCTCAAAAATACCTTTGACATAGACCATGCCCTTTTCACTCAATTGAAGCTCCTTTCTCATTTGCTCTACCTGCTGGTCATCTCCTTGAACAATAATCTCTCCCAGGCTTCCATCTTCTCCAACTATCATTTTAACTTTGATCTCCTCCTTTCTTGATGCTTTCACCCAGTAATATGCTCCTCTGCAGTTTTCCAAGAGCCTCAGATTAGATTATAACGTTCTATCAGATATCTCAAA

Coding sequence (CDS)

ATGCTCACCGTCTATGCCAAACTAGTATGGGGTCAAATTTCTGCTGCAAATTGGGGGAAAAAGAAGGCGGTTTTGCAGCCACCGTTCCGATCATCCAATTCCCTCGAAACCCTGTTTTTTTCTGTTCCATTTTTTTTTTCCGGCGGAAGTTTACGATTTTTCTTGACCAAGATGTTGCGGATTGCGGCGAGAAGGCTCTCTTCACTCTCTTCCTCCCATTTCAGGCCCACTATTGCCTCTTCTTTGCCTGGTTCTCACAAGATCATCGATGGCGGTGATTCCGCCCCTTCCAATGATTTCAGATCCGTCACCTCCTTCAACACCTTCCCTTTTGGACCCTTCTTCGATCGTAATTGTAGAGGTTTTGCTTCTGATGCATTGACTTCAACAAAGGAAACCGACTTAGTTCCAGATGTTCCTGCTACTGTAGCAGCCGTTAAGAACCCTACTTCAAAGATAGTCTACGACGAATACAATCATGAGCGATTTCCTCCGGGTGACCCCAGCAAGCGTGCATTTGCATATTTTGTATTGTCAGGTGGTCGATTTGTCTATGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTCGTCCTTAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCTTCACTTGAGGTTGACCTTTCAAGCATCGAGCCTGGTGCTACCGTGACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGTCGAACTGAGGACGATATTAAGTTAGCAAATAGTGTGGACATTGGATCTCTTCGTGACCCACAGCAGGATGGCGAGAGAGTTAAGGATCCAGAATGGCTTATCGTGGTCGGCGTCTGCACGCATCTTGGCTGCATTCCCTTGCCGAACGCTGGCGATTACGGTGGGTGGTTCTGTCCATGCCATGGTTCCCATTACGATATCTCCGGTAGGATCCGTAAAGGACCAGCACCATACAATTTGGAGGTACCTACCTATACCTTCTTGGATGAGAACAAGCTCTTGATTGGTCAAATATATATTGCTCATACCACTCCTGCGAATCGGGGGAAGAAGACCGGTTCTGTTCTTCCATCGCCTCCTCTTGAATTCTCAATATCCTTCCAAATCCAACCCTCCTTCTCCATTCATTTCTGCATAACCAAAAGGTGGACGAAGATGTTGAGGATTGCGGCTCGAAGGTTCTCCTCACTCTCTTCTTCGCATTTCAGGCCCACTATTTCCTCTTCTTTCCCCGGTTCTCATAAGATCGTCGATTCCGGTGATTCCAATGATTTCAGATCCGGTGGATTCTTCAACACCTTCCCATCCGGACCTCACTTTGGTCGCAATTGTAGAGGTTTTGCTTCTGATGCATTGACCTCAACTAAGGATGATGGCTTAATTCTGGATATCCCTGCAACTGTAGCTGCCATTAAGAACCCTTCTTCAAAGATCGTCTATGACGAATACAATCACGAGCGATTTCCTCCTGGTGACCCCAGCAAGCGTGCATTTGCATATTTTGTATTATCAGGTGGTCGGTTTGTCTATGCTTCTTTGATTCGTCTCCTTGTTCTCAAGTTTGTCCTTAGCATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCCTCACTCGAAGTTGACCTTTCAAGTATTGAGCCTGGCTCTACCGTCACAGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGCCGAACCGAGGACGATATTAAGGTAGCAAATAGTGTGGACATTGGATCTCTTCGTGACCCGCAGCAGGACGAAGAGAGAGTTAAAAATCCAGAGTGGCTTATCGTGGTCGGCGTCTGCACGCATCTTGGTTGCATTCCCTTGCCAAATGCTGGCGATTACGGTGGATGGTTCTGTCCATGCCATGGTTCCCATTACGATATCTCTGGTAGGATCCGTAAAGGACCAGCACCATACAATTTGGAGGTACCTACCTACACCTTCTTGGATGAAAACAAGCTTTTGATCGGTTAA

Protein sequence

MLTVYAKLVWGQISAANWGKKKAVLQPPFRSSNSLETLFFSVPFFFSGGSLRFFLTKMLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDRNCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIGQIYIAHTTPANRGKKTGSVLPSPPLEFSISFQIQPSFSIHFCITKRWTKMLRIAARRFSSLSSSHFRPTISSSFPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFGRNCRGFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKVANSVDIGSLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG

Homology

[Close]

BLAST of Cp4.1LG13g05930 vs. Swiss-Prot
Match: UCRI2_TOBAC (Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 3.8e-114
Identity = 206/277 (74.37%), Postives = 230/277 (83.03%), Query Frame = 1


Query: 58  MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDR 117
           MLRIA RR SSLS    R  + S  P S   I     +  +D  S  S +       F  
Sbjct: 1   MLRIAGRRASSLS----RWPVRSVAPSSSAFISANHFSSDDDSSSPRSISP-SLASVFLH 60

Query: 118 NCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 177
           + RGF+S++++   +  LVPD+P TVAA+KNPTSKIVYDE+NHER+PPGDPSKRAFAYFV
Sbjct: 61  HTRGFSSNSVSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFV 120

Query: 178 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 237
           L+GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIR
Sbjct: 121 LTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIR 180

Query: 238 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 297
           RRTEDDI LANSVD+GSLRDPQQD ERVK PEWL+V+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEDDINLANSVDLGSLRDPQQDAERVKSPEWLVVIGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 298 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 335
           CHGSHYDISGRIRKGPAPYNLEVPTY+FL+ENKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of Cp4.1LG13g05930 vs. Swiss-Prot
Match: UCRI1_TOBAC (Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 5.1e-111
Identity = 194/257 (75.49%), Postives = 220/257 (85.60%), Query Frame = 1


Query: 78  IASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDRNCRGFASDALTSTKETDLVP 137
           + S+ P S   I     +  +D  S  S +       F  + RGF+S++++   +  LVP
Sbjct: 3   VRSAAPSSSAFISANHFSSDDDSSSPRSISP-SLASVFLHHTRGFSSNSVSPAHDMGLVP 62

Query: 138 DVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFV 197
           D+P TVAA+KNPTSKIVYDE+NHER+PPGDPSKRAFAYFVL+GGRFVYASL+RLL+LKFV
Sbjct: 63  DLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFV 122

Query: 198 LSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRD 257
           LSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIRRRTEDDI LANSVD+GSLRD
Sbjct: 123 LSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRD 182

Query: 258 PQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYN 317
           PQQD ERVK+PEWL+V+GVCTHLGCIPLPNAGD+GGWFCPCHGSHYDISGRIRKGPAPYN
Sbjct: 183 PQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYN 242

Query: 318 LEVPTYTFLDENKLLIG 335
           LEVPTY+FL+ENKLLIG
Sbjct: 243 LEVPTYSFLEENKLLIG 258

[Close]

BLAST of Cp4.1LG13g05930 vs. Swiss-Prot
Match: UCRI_SOLTU (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FES1 PE=1 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 3.3e-110
Identity = 203/274 (74.09%), Postives = 229/274 (83.58%), Query Frame = 1


Query: 384 MLRIAARRFSSLSSSHFRPTISSSFPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFGRNCR 443
           MLR+A RR SS ++       SS+F        + DS+  RS     T      F    R
Sbjct: 1   MLRVAGRRLSSSAARS-----SSTFFTRSSFTVTDDSSPARSPSPSLT----SSFLDQIR 60

Query: 444 GFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 503
           GF+S++++     GL+ D+PATVAAIKNPSSKIVYD+ NHER+PPGDPSKRAFAYFVL+G
Sbjct: 61  GFSSNSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTG 120

Query: 504 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 563
           GRFVYAS +RLL+LKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 564 EDDIKVANSVDIGSLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 623
           +DDIK+ANSVD+G+LRDPQQD ERVKNPEWL+VVGVCTHLGCIPLPNAGD+GGWFCPCHG
Sbjct: 181 DDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHG 240

Query: 624 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 658
           SHYDISGRIRKGPAPYNLEVPTY+FL+ENKLLIG
Sbjct: 241 SHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 265

[Close]

BLAST of Cp4.1LG13g05930 vs. Swiss-Prot
Match: UCRI3_TOBAC (Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.3e-109
Identity = 200/277 (72.20%), Postives = 231/277 (83.39%), Query Frame = 1


Query: 58  MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDR 117
           MLRIA R+LSS +++       +  P +    D    A S    S+ S        F D+
Sbjct: 1   MLRIAGRKLSSSAATRSSSAFFTRNPFTFTD-DSSSPARSPSPASLAS-------QFLDQ 60

Query: 118 NCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 177
             RGF+S++++   +T LV D+PATVAA+KNP+SKIVYD+ NHER+PPGDPSKRAFAYFV
Sbjct: 61  -FRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFV 120

Query: 178 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 237
           L+GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIR
Sbjct: 121 LTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIR 180

Query: 238 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 297
           RRTE+DI LANSVD+GSLRDPQQD ERVK+PEWL+V+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 298 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 335
           CHGSHYDISGRIRKGPAPYNLEVPTY+F++ENKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of Cp4.1LG13g05930 vs. Swiss-Prot
Match: UCRI5_TOBAC (Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.6e-109
Identity = 199/277 (71.84%), Postives = 232/277 (83.75%), Query Frame = 1


Query: 58  MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDR 117
           MLRIA R+LSS +++       +  P +       DS+      S TS  +     F D+
Sbjct: 1   MLRIAGRKLSSSAAARSSSAFFTRNPFTFT----DDSSSPTRSPSPTSLAS----QFLDQ 60

Query: 118 NCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 177
             RGF+S++++   +T LV D+PATVAA+KNP+SKIVYD+ NHER+PPGDPSKRAFAYFV
Sbjct: 61  -FRGFSSNSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFV 120

Query: 178 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 237
           L+GGRFVYASL+RLL+LKFVLSMSASKDVLALASLEVDLSSIEPG TVTVKWRGKPVFIR
Sbjct: 121 LTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIR 180

Query: 238 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 297
           RRT++DI LANSVD+GSLRDPQQD ERVK+PEWL+V+GVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTDEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 298 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 335
           CHGSHYDISGRIRKGPAPYNLEVPTY+F++ENKLLIG
Sbjct: 241 CHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLLIG 268

[Close]

BLAST of Cp4.1LG13g05930 vs. TrEMBL
Match: A0A0A0KTT3_CUCSA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_5G464800 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 6.7e-142
Identity = 250/274 (91.24%), Postives = 261/274 (95.26%), Query Frame = 1


Query: 384 MLRIAARRFSSLSSSHFRPTISSSFPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFGRNCR 443
           MLRIAARR SSLSSSHFRPTI+SSFP SH I+DS DSNDFRS GFFNTFP    F R+ R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60

Query: 444 GFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 503
           GFASDAL STKDDGLILDIPATVAA+KNPSSKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 504 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 563
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 564 EDDIKVANSVDIGSLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 623
           EDDIK+ANSVDIGSLRDPQQDEERVK+PEWL+VVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 624 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 658
           SHYD+SGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of Cp4.1LG13g05930 vs. TrEMBL
Match: A0A0A0KNC0_CUCSA (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_5G464790 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 7.4e-141
Identity = 251/277 (90.61%), Postives = 262/277 (94.58%), Query Frame = 1


Query: 58  MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDR 117
           MLR+AARRLSSLSSSHFRPTIASSLP SH IID  DS   NDFRS   F+TFP  P FDR
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDS---NDFRSAGFFHTFPIRPHFDR 60

Query: 118 NCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 177
           N RGFASDALTSTKE +LVPDVPAT+AAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 178 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 237
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 238 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 297
           RRTE+DIKLANSVDIG+LRDPQQDGERVKDPEWL+VVGVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 298 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 335
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of Cp4.1LG13g05930 vs. TrEMBL
Match: M5WT51_PRUPE (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Prunus persica GN=PRUPE_ppa009909mg PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 6.5e-121
Identity = 227/280 (81.07%), Postives = 247/280 (88.21%), Query Frame = 1


Query: 58  MLRIAARRLSSLSSSHFRPT---IASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPF 117
           MLR+AARRL SLS+S +RP     ASS   S  +IDG DS  S+D RS+  F T  + P 
Sbjct: 1   MLRVAARRLCSLSASPWRPNQAATASSSVLSRNLIDGRDS--SDDLRSIY-FTTDFYLP- 60

Query: 118 FDRNCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFA 177
                RGFASD+LT +K+ +LVPDVP TVAAVKNPTSKIVYD+YNHER+PPGDPSKRAFA
Sbjct: 61  ----SRGFASDSLTPSKDNNLVPDVPPTVAAVKNPTSKIVYDDYNHERYPPGDPSKRAFA 120

Query: 178 YFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPV 237
           YFVL+GGRFVYASLIRLLVLKFVLSMSASKDVLA+ASLEVDLSSIEPGATVTVKWRGKPV
Sbjct: 121 YFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGATVTVKWRGKPV 180

Query: 238 FIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGW 297
           FIRRRT+DDIKLANSVD+ SLRDPQQD ERVK+PEWLIVVGVCTHLGCIPLPNAGD+GGW
Sbjct: 181 FIRRRTDDDIKLANSVDVNSLRDPQQDAERVKNPEWLIVVGVCTHLGCIPLPNAGDFGGW 240

Query: 298 FCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 335
           FCPCHGSHYD+SGRIRKGPAPYNLEVPTYTFLDENKLLIG
Sbjct: 241 FCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDENKLLIG 272

[Close]

BLAST of Cp4.1LG13g05930 vs. TrEMBL
Match: V4U2T2_9ROSI (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Citrus clementina GN=CICLE_v10016224mg PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 5.5e-120
Identity = 220/279 (78.85%), Postives = 244/279 (87.46%), Query Frame = 1


Query: 58  MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSN--DFRSVTSFNTFPFGPFF 117
           MLR+AARRL S SSS     IASS      II+G DS+ S+  DFRS   + +   GP F
Sbjct: 1   MLRVAARRLLSPSSSSSLRPIASS----RNIINGADSSSSSNDDFRSNGFYGSGYLGPQF 60

Query: 118 DRNCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAY 177
              CRGF+S++LT   E  LVP VPATVAAVKNPTSKIVYDEYNHER+PPGDPSKRAFAY
Sbjct: 61  QLPCRGFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFAY 120

Query: 178 FVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVF 237
           FVL+GGRFVYASLIRLL+LKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPVF
Sbjct: 121 FVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVF 180

Query: 238 IRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWF 297
           IRRRTE+DIKLAN+VD+GSLRDPQQD ERVK+PEWL+VVGVCTHLGCIPLPNAGD+GGWF
Sbjct: 181 IRRRTEEDIKLANTVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWF 240

Query: 298 CPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 335
           CPCHGSHYDISGRIRKGPAPYNLEVP+Y+FLDENK++IG
Sbjct: 241 CPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMIIG 275

[Close]

BLAST of Cp4.1LG13g05930 vs. TrEMBL
Match: A0A067DSL7_CITSI (Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Citrus sinensis GN=CISIN_1g023850mg PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 3.9e-118
Identity = 222/280 (79.29%), Postives = 244/280 (87.14%), Query Frame = 1


Query: 58  MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDG-GDSAPSND-FRSVTSFNTFPFGPFF 117
           MLR+AARRL S SSS     +ASS      II+G G S+ SND FRS   + +   GP F
Sbjct: 1   MLRVAARRLLSPSSSSSLRPMASS----RNIINGAGSSSSSNDDFRSNGFYGSGYLGPQF 60

Query: 118 DRNCRG-FASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFA 177
              CRG F+S++LT   E  LVP VPATVAAVKNPTSKIVYDEYNHER+PPGDPSKRAFA
Sbjct: 61  QLPCRGDFSSESLTPRNEESLVPGVPATVAAVKNPTSKIVYDEYNHERYPPGDPSKRAFA 120

Query: 178 YFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPV 237
           YFVL+GGRFVYASLIRLL+LKFVLSMSASKDVLA+ASLEVDLSSIEPG+TVTVKWRGKPV
Sbjct: 121 YFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPV 180

Query: 238 FIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGW 297
           FIRRRTE+DIKLANSVD+GSLRDPQQD ERVK+PEWL+VVGVCTHLGCIPLPNAGD+GGW
Sbjct: 181 FIRRRTEEDIKLANSVDLGSLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLPNAGDFGGW 240

Query: 298 FCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 335
           FCPCHGSHYDISGRIRKGPAPYNLEVP+Y+FLDENK+LIG
Sbjct: 241 FCPCHGSHYDISGRIRKGPAPYNLEVPSYSFLDENKMLIG 276

[Close]

BLAST of Cp4.1LG13g05930 vs. TAIR10
Match: AT5G13440.1 (AT5G13440.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 407.1 bits (1045), Expect = 2.0e-113
Identity = 206/279 (73.84%), Postives = 231/279 (82.80%), Query Frame = 1


Query: 58  MLRIAARRLSSLSSSHFRPTIASS--LPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFF 117
           MLR+A RRL S+S    R + A+S  L   H + DGG+S+ ++  RSV S +   F  + 
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVLSRDHTLSDGGNSSSAS--RSVPSADLSSFNSYH 60

Query: 118 DRNCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAY 177
               RGFAS  +T   E     +VPATV AVK P SKIVYD++NHER+PPGDPSKRAFAY
Sbjct: 61  RSVIRGFASQVITQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAY 120

Query: 178 FVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVF 237
           FVLSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG TVTVKWRGKPVF
Sbjct: 121 FVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVF 180

Query: 238 IRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWF 297
           IRRRTEDDIKLANSVD+GSLRDPQ+D  RVK+PEWLIVVGVCTHLGCIPLPNAGDYGGWF
Sbjct: 181 IRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWF 240

Query: 298 CPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 335
           CPCHGSHYDISGRIRKGPAPYNLEVPTY+FL+ENKLLIG
Sbjct: 241 CPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 274

[Close]

BLAST of Cp4.1LG13g05930 vs. TAIR10
Match: AT5G13430.1 (AT5G13430.1 Ubiquinol-cytochrome C reductase iron-sulfur subunit)

HSP 1 Score: 394.0 bits (1011), Expect = 1.8e-109
Identity = 202/279 (72.40%), Postives = 226/279 (81.00%), Query Frame = 1


Query: 58  MLRIAARRLSSLSSSHFRPTIASSLPGS--HKIIDGGDSAPSNDFRSVTSFNTFPFGPFF 117
           MLR+A RRL S+S    R + A+S   S  H + DGG  + S   RS+ S +      + 
Sbjct: 1   MLRVAGRRLFSVSQ---RSSTATSFVVSRDHTLSDGGGDSSSAP-RSLPSAD---LSSYH 60

Query: 118 DRNCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAY 177
               RGF+S  L    E     +VPATV AVK P SKIVYD++NHER+PPGDPSKRAFAY
Sbjct: 61  RSLIRGFSSQVLAQGNEIGFGSEVPATVEAVKTPNSKIVYDDHNHERYPPGDPSKRAFAY 120

Query: 178 FVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVF 237
           FVLSGGRFVYAS++RLLVLK ++SMSASKDVLALASLEVDL SIEPG TVTVKWRGKPVF
Sbjct: 121 FVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVTVKWRGKPVF 180

Query: 238 IRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWF 297
           IRRRTEDDIKLANSVD+GSLRDPQ+D  RVK+PEWL+VVGVCTHLGCIPLPNAGDYGGWF
Sbjct: 181 IRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWF 240

Query: 298 CPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 335
           CPCHGSHYDISGRIRKGPAPYNLEVPTY+FL+ENKLLIG
Sbjct: 241 CPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLLIG 272

[Close]

BLAST of Cp4.1LG13g05930 vs. TAIR10
Match: AT4G03280.1 (AT4G03280.1 photosynthetic electron transfer C)

HSP 1 Score: 58.2 bits (139), Expect = 2.3e-08
Identity = 28/71 (39.44%), Postives = 40/71 (56.34%), Query Frame = 1


Query: 588 VKNPEWLIVVG---VCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVP 647
           V+N + L   G   VCTHLGC+   N  +   + CPCHGS Y+  GR+ +GPAP +L + 
Sbjct: 142 VENDKTLATYGINAVCTHLGCVVPWNKAE-NKFLCPCHGSQYNAQGRVVRGPAPLSLALA 201

Query: 648 TYTFLDENKLL 656
                +  K+L
Sbjct: 202 HADIDEAGKVL 211

[Close]

BLAST of Cp4.1LG13g05930 vs. NCBI nr
Match: gi|659072408|ref|XP_008465498.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 520.8 bits (1340), Expect = 3.5e-144
Identity = 252/274 (91.97%), Postives = 263/274 (95.99%), Query Frame = 1


Query: 384 MLRIAARRFSSLSSSHFRPTISSSFPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFGRNCR 443
           MLRIAARR SSLSSSHFRPTI+SS PGSH I+DS DSNDFRS GFFNTFP  PHF RN R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSADSNDFRSAGFFNTFPIRPHFDRNSR 60

Query: 444 GFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 503
           GFASDAL STKDDGLI+DIPATVAA+KNPSSKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLIMDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 504 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 563
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 564 EDDIKVANSVDIGSLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 623
           EDDIK+ANSVDIGSLRDPQQDEERVK+PEWL+VVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 624 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 658
           SHYD+SGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of Cp4.1LG13g05930 vs. NCBI nr
Match: gi|659072410|ref|XP_008465508.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis melo])

HSP 1 Score: 515.0 bits (1325), Expect = 1.9e-142
Identity = 255/277 (92.06%), Postives = 264/277 (95.31%), Query Frame = 1


Query: 58  MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDR 117
           MLRIAARRLSSLSSSHFRPTIASSLPGSH IID  DS   NDFRS   FNTFP GP FDR
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSLPGSHNIIDSTDS---NDFRSGGFFNTFPIGPHFDR 60

Query: 118 NCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 177
           N RGFASDAL+S KET+LVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALSSMKETNLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 178 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 237
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIR 180

Query: 238 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 297
           RRTE+DIKLANSVDIG+LRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 298 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 335
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of Cp4.1LG13g05930 vs. NCBI nr
Match: gi|449452030|ref|XP_004143763.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 512.7 bits (1319), Expect = 9.6e-142
Identity = 250/274 (91.24%), Postives = 261/274 (95.26%), Query Frame = 1


Query: 384 MLRIAARRFSSLSSSHFRPTISSSFPGSHKIVDSGDSNDFRSGGFFNTFPSGPHFGRNCR 443
           MLRIAARR SSLSSSHFRPTI+SSFP SH I+DS DSNDFRS GFFNTFP    F R+ R
Sbjct: 1   MLRIAARRLSSLSSSHFRPTIASSFPASHNIIDSTDSNDFRSAGFFNTFPIRSQFDRHSR 60

Query: 444 GFASDALTSTKDDGLILDIPATVAAIKNPSSKIVYDEYNHERFPPGDPSKRAFAYFVLSG 503
           GFASDAL STKDDGLILDIPATVAA+KNPSSKIVYD+YNHERFPPGDPSKRAFAYFVLSG
Sbjct: 61  GFASDALASTKDDGLILDIPATVAAVKNPSSKIVYDDYNHERFPPGDPSKRAFAYFVLSG 120

Query: 504 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 563
           GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT
Sbjct: 121 GRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT 180

Query: 564 EDDIKVANSVDIGSLRDPQQDEERVKNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHG 623
           EDDIK+ANSVDIGSLRDPQQDEERVK+PEWL+VVGVCTHLGCIPLPNAGDYGGWFCPCHG
Sbjct: 181 EDDIKLANSVDIGSLRDPQQDEERVKDPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHG 240

Query: 624 SHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 658
           SHYD+SGRIRKGPAPYNLEVPTY+FL+ NKLLIG
Sbjct: 241 SHYDVSGRIRKGPAPYNLEVPTYSFLEGNKLLIG 274

[Close]

BLAST of Cp4.1LG13g05930 vs. NCBI nr
Match: gi|449452028|ref|XP_004143762.1| (PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 509.2 bits (1310), Expect = 1.1e-140
Identity = 251/277 (90.61%), Postives = 262/277 (94.58%), Query Frame = 1


Query: 58  MLRIAARRLSSLSSSHFRPTIASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPFFDR 117
           MLR+AARRLSSLSSSHFRPTIASSLP SH IID  DS   NDFRS   F+TFP  P FDR
Sbjct: 1   MLRVAARRLSSLSSSHFRPTIASSLPLSHNIIDSTDS---NDFRSAGFFHTFPIRPHFDR 60

Query: 118 NCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 177
           N RGFASDALTSTKE +LVPDVPAT+AAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV
Sbjct: 61  NSRGFASDALTSTKENNLVPDVPATIAAVKNPTSKIVYDEYNHERFPPGDPSKRAFAYFV 120

Query: 178 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 237
           LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR
Sbjct: 121 LSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPVFIR 180

Query: 238 RRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGWFCP 297
           RRTE+DIKLANSVDIG+LRDPQQDGERVKDPEWL+VVGVCTHLGCIPLPNAGD+GGWFCP
Sbjct: 181 RRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCP 240

Query: 298 CHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 335
           CHGSHYD+SGRIRKGPAPYNLEVPTYTFL++NKLLIG
Sbjct: 241 CHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKLLIG 274

[Close]

BLAST of Cp4.1LG13g05930 vs. NCBI nr
Match: gi|595939955|ref|XP_007215798.1| (hypothetical protein PRUPE_ppa009909mg [Prunus persica])

HSP 1 Score: 443.0 bits (1138), Expect = 9.3e-121
Identity = 227/280 (81.07%), Postives = 247/280 (88.21%), Query Frame = 1


Query: 58  MLRIAARRLSSLSSSHFRPT---IASSLPGSHKIIDGGDSAPSNDFRSVTSFNTFPFGPF 117
           MLR+AARRL SLS+S +RP     ASS   S  +IDG DS  S+D RS+  F T  + P 
Sbjct: 1   MLRVAARRLCSLSASPWRPNQAATASSSVLSRNLIDGRDS--SDDLRSIY-FTTDFYLP- 60

Query: 118 FDRNCRGFASDALTSTKETDLVPDVPATVAAVKNPTSKIVYDEYNHERFPPGDPSKRAFA 177
                RGFASD+LT +K+ +LVPDVP TVAAVKNPTSKIVYD+YNHER+PPGDPSKRAFA
Sbjct: 61  ----SRGFASDSLTPSKDNNLVPDVPPTVAAVKNPTSKIVYDDYNHERYPPGDPSKRAFA 120

Query: 178 YFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGATVTVKWRGKPV 237
           YFVL+GGRFVYASLIRLLVLKFVLSMSASKDVLA+ASLEVDLSSIEPGATVTVKWRGKPV
Sbjct: 121 YFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGATVTVKWRGKPV 180

Query: 238 FIRRRTEDDIKLANSVDIGSLRDPQQDGERVKDPEWLIVVGVCTHLGCIPLPNAGDYGGW 297
           FIRRRT+DDIKLANSVD+ SLRDPQQD ERVK+PEWLIVVGVCTHLGCIPLPNAGD+GGW
Sbjct: 181 FIRRRTDDDIKLANSVDVNSLRDPQQDAERVKNPEWLIVVGVCTHLGCIPLPNAGDFGGW 240

Query: 298 FCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLDENKLLIG 335
           FCPCHGSHYD+SGRIRKGPAPYNLEVPTYTFLDENKLLIG
Sbjct: 241 FCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLDENKLLIG 272

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g05930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UCRI2_TOBAC	3.8e-114	74.37	Cytochrome b-c1 complex subunit Rieske-2, mitochondrial OS=Nicotiana tabacum PE=...	[more]
UCRI1_TOBAC	5.1e-111	75.49	Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment) OS=Nicotiana ...	[more]
UCRI_SOLTU	3.3e-110	74.09	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum tuberosum GN=FE...	[more]
UCRI3_TOBAC	1.3e-109	72.20	Cytochrome b-c1 complex subunit Rieske-3, mitochondrial OS=Nicotiana tabacum PE=...	[more]
UCRI5_TOBAC	1.6e-109	71.84	Cytochrome b-c1 complex subunit Rieske-5, mitochondrial OS=Nicotiana tabacum PE=...	[more]

BLAST of Cp4.1LG13g05930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTT3_CUCSA	6.7e-142	91.24	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_...	[more]
A0A0A0KNC0_CUCSA	7.4e-141	90.61	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Cucumis sativus GN=Csa_...	[more]
M5WT51_PRUPE	6.5e-121	81.07	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Prunus persica GN=PRUPE...	[more]
V4U2T2_9ROSI	5.5e-120	78.85	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Citrus clementina GN=CI...	[more]
A0A067DSL7_CITSI	3.9e-118	79.29	Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Citrus sinensis GN=CISI...	[more]

BLAST of Cp4.1LG13g05930 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13440.1	2.0e-113	73.84	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT5G13430.1	1.8e-109	72.40	Ubiquinol-cytochrome C reductase iron-sulfur subunit	[more]
AT4G03280.1	2.3e-08	39.44	photosynthetic electron transfer C	[more]

BLAST of Cp4.1LG13g05930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072408\|ref\|XP_008465498.1\|	3.5e-144	91.97	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
gi\|659072410\|ref\|XP_008465508.1\|	1.9e-142	92.06	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
gi\|449452030\|ref\|XP_004143763.1\|	9.6e-142	91.24	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
gi\|449452028\|ref\|XP_004143762.1\|	1.1e-140	90.61	PREDICTED: cytochrome b-c1 complex subunit Rieske-4, mitochondrial-like [Cucumis...	[more]
gi\|595939955\|ref\|XP_007215798.1\|	9.3e-121	81.07	hypothetical protein PRUPE_ppa009909mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity
GO:0051537	2 iron, 2 sulfur cluster binding
GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors
GO:0008121	ubiquinol-cytochrome-c reductase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR017941	Rieske_2Fe-2S
IPR014349	Rieske_Fe-S_prot
IPR006317	Ubiquinol_cyt_c_Rdtase_Fe-S-su
IPR005805	Rieske_Fe-S_prot_C
IPR004192	Rieske_TM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	hydrogen ion transmembrane transport
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respiratory chain
cellular_component	GO:0045275	respiratory chain complex III
cellular_component	GO:0016020	membrane
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g05930.1	Cp4.1LG13g05930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004192	Ubiquinol cytochrome reductase, transmembrane domain	GENE3D	G3DSA:1.20.5.270		coord: 160..194 score: 2.0E-5coord: 481..517 score: 1.
IPR004192	Ubiquinol cytochrome reductase, transmembrane domain	PFAM	PF02921	UCR_TM	coord: 158..205 score: 1.2E-10coord: 481..528 score: 1.2
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 272..283 score: 3.0E-16coord: 306..318 score: 3.0E-16coord: 294..306 score: 3.0
IPR006317	Ubiquinol-cytochrome c reductase, iron-sulphur subunit	TIGRFAMs	TIGR01416	TIGR01416	coord: 514..657 score: 1.1E-54coord: 191..334 score: 6.2
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 59..77 score: 6.9E-139coord: 95..338 score: 6.9E
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	GENE3D	G3DSA:2.102.10.10		coord: 195..341 score: 9.9E-43coord: 518..656 score: 3.9
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 540..643 score: 4.7E-11coord: 218..320 score: 3.4
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROFILE	PS51296	RIESKE	coord: 264..332 score: 18.316coord: 587..655 score: 17
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	unknown	SSF50022	ISP domain	coord: 196..332 score: 6.29E-41coord: 519..655 score: 5.76
None	No IPR available	PANTHER	PTHR10134:SF1	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 95..338 score: 6.9E-139coord: 59..77 score: 6.9E
None	No IPR available	unknown	SSF81502	ISP transmembrane anchor	coord: 145..207 score: 1.66E-13coord: 474..530 score: 2.18

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG13g05930	Cucsa.033600	Cucumber (Gy14) v1	cgycpeB0012
Cp4.1LG13g05930	CmaCh15G008110	Cucurbita maxima (Rimu)	cmacpeB305
Cp4.1LG13g05930	CmaCh04G022210	Cucurbita maxima (Rimu)	cmacpeB705
Cp4.1LG13g05930	CmoCh04G023220	Cucurbita moschata (Rifu)	cmocpeB657
Cp4.1LG13g05930	CmoCh15G008360	Cucurbita moschata (Rifu)	cmocpeB268
Cp4.1LG13g05930	Cla005925	Watermelon (97103) v1	cpewmB184
Cp4.1LG13g05930	Csa5G464790	Cucumber (Chinese Long) v2	cpecuB179
Cp4.1LG13g05930	MELO3C005102	Melon (DHL92) v3.5.1	cpemeB157
Cp4.1LG13g05930	ClCG01G007840	Watermelon (Charleston Gray)	cpewcgB166
Cp4.1LG13g05930	CSPI05G15870	Wild cucumber (PI 183967)	cpecpiB181
Cp4.1LG13g05930	Lsi09G008270	Bottle gourd (USVL1VR-Ls)	cpelsiB130
Cp4.1LG13g05930	MELO3C005102.2	Melon (DHL92) v3.6.1	cpemedB184
Cp4.1LG13g05930	CsaV3_5G024910	Cucumber (Chinese Long) v3	cpecucB0214
Cp4.1LG13g05930	Bhi12G000947	Wax gourd	cpewgoB0220
Cp4.1LG13g05930	CsGy5G015610	Cucumber (Gy14) v2	cgybcpeB602

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG13g05930	Cp4.1LG01g19250	Cucurbita pepo (Zucchini)	cpecpeB199

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG13g05930	Silver-seed gourd	carcpeB0669
Cp4.1LG13g05930	Silver-seed gourd	carcpeB1157
Cp4.1LG13g05930	Wax gourd	cpewgoB0218
Cp4.1LG13g05930	Wax gourd	cpewgoB0228