CsGy5G009200 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G009200
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
Location	Chr5 : 7391668 .. 7395667 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTCAGGGCTCCTCGAAGAAGATGATAGCCACCCAGGCTGAGATGGTCGAGGCTAGGGTTCCAATTCCTTACAGAGATCAGTGCGCTCACTTGTTGATCCCTCTTAATAAATGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAGACGAGCGCCATTCCTACGAGAAGTGTGAATATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAAAAGATCCGTGAGGAACAGGCCAAGTTGAAGAAGGGTATTCATCTCATTCCCAAAACTGCCAATGTATGACCCCATTCTTCAATTAGGTTCGTCTCTATTTCTGTCTCATCTTCTTAAACATTATTATTTGATTCTATTGCATTTTTCTTTTTACCCTGTCATCGGCTTCTCATAATCTTGGTCCGAATGTTTAAAATTCCATGTTTTTTTTCTTTTCCTTTTGTTTTAGGGCTATATCCTTTCCGCTTCATGATTTCACCCGTAGCATGATTAGGATTTATTTCTTTCTAGAACTATGTCGGTACGGATAATGAAACGCAGAAACTTGTGGATGGCGGCGTTCTATGAAATACTTCGATGACTTACAAGTACCGATTTGTGTGCGATCTAAGCTAGAATCCGAGGAATGAAACAATTTGAGAATTAAGTCAAAGGAAACGCTGTTCTGCACTTCTGCTACTTAAAATTAAATGGAAAATAAGATCATTATGTCCCAAGCTTGGGCTCTGAAAGTATAAGCTACTAATTATTGAAAACAGTATTAAAATTGGCTGAAGTGTTTTGATGAAAATTAATGGGTATATAATAGATTTCTGGTGGGACCTTTTGTATTTACTTGTGAGACTTAAGAGGGTATATGCTCTTATGATTCATCCCAGAAGTATAATATATTTTTTCCTATTCTACCATTTCAATATTAGAAACTTTGGTGTTATGATGGTCCATCCTAAGTTCAAATGATGCTCAAAATTTACGACTTACATAGGTCTTTCTATGGACAAAGGATATATTATAATTTATCACAGTGTGGATGAGCTTTCTCATTATTTAACCTATGCTCACAGTGCCTATTCCTATTGCATATCAAGAAATTGCTGAGTACTCCTCCCTCATATGGGTCAAAAGAGTGCTTGGTATATCACATAGGAAATGATGAATTTGACTTGTCTACTTGTTTAATCTTTAATAGTACTGAGAAATAATAATAGAGCTCTCTCTCTAAAGTAGCCCAAAATCGAAAATTTCTATGCAACATTAGACCACCTCAAGGATACAGTCAATCAGCCTTATTGAATGAAATCGTCTTGACTATTCCTTTGAACAATTTGTTTCCATAACAATTGTTTCATATTTTTTATTAAAGAATGACAAAACCCTAAGAAAACCCAAAGACTTGCAATAATTAATTACACAGTTTCTTGCTAATACAAAGTAGCAACAGACACTGTATCTACACATCAAAAATTCAAGAATGATAACGCTGTTGAATTCTATTCATTGTATCAAGACTTTCACTGTGTTTTCAAGGAACGCTGTTGTGATTGCATATGGCAAGAGGCGTTGTGAGGCACATGTTAATTGCTAGGGTGGTGTCCTATTTGATTATGTTCAATAAGGCACTCCCTTTCACTCATGAAAACTGAAGAAGAGTCAAATGAAGAAGGAAAGGAGTGATGAGGGGGAAGAATTAAAAAAAGAAGAGTGGGAGAAGGGACAAGTTGAAGAAAAGAAGAGAGGGCCAAGGAGGAGGGGGAAGAGTTAGAAAAAGAAGAAGAGTGGAAAGAGGAAGGGTTAGGAAAAATAGAAGAAAAGATGGAGAAGAAAGAGTCAAAAGATAAAGTTCACCTCTTGCACCTCTAGTTTGCAGACGATACTGTACACTTTTGCTCCGAAAAAGAGTTCTTTCTCAATCTGAACTAAATTTCAAATTGTTTTCATTTTTCCTACATGAAAACAGTTGTTCTTGTAAAAAAATCAATCTTTTTTGAAATAATCTCATCCCTTAGGACTGATAGAGGCAAATGTCAAATTTTGAGCATGAAATGTGAGTCTTTCAAATTGAAAAGGTGGGCTAATTTGGTTGGTTGTGAGTTGGAAGTTTCCCTTCATCCTTCTTGAGTTTTTCTCTCGGTCATCCCCTTTAGGATGTTCCTTTTTTATCTGTCTCCCTAAAAAGCATATTTGATGCAACCTAATTCTCAACTCTCAAGTTTCAAATCTTATTCATTGATTAGCCCTTACTAAATACAAACAACTTACTTATATGTGCCAAATTGAAAGGAATGGTCTTTAACTAACTATCTTCCTTAGTTTAAAATAATAAAGCAACTTCAAGACTTATAAAAAATAAAAGACTTGTGATTGTCGAGGATTATTTGGTTTCTCAGTGTTGGTTTTTTCTCTTTATGTGTAGGATTTAAAGTTCAGAAGAAATTTCATTGATGCTGAATTTGATGATTGTATTACTTGTTTTTTTTCTTTTTTCTTTTTTGAAACAACTACTTCCATTGAGAAAAAATGAAAAGAATACAAGGGTATACAAAAAACAGTCAACCCAACAAATCATCCCTACTAGAAAGGAGGTCTAACTAAGAGAAATGTTTCCTAAAGAATAATTACAAAAAAGCTTTGAAACCGAAGCCCAAAGAGACGTGAAATCTTGCCAAAAATCAAACCTCTTGAGGTTCCCTTTCCCTCCCTCTAAACACCTTATCATTCCTCTCTGCCCTAATATCTCGAACCACCGAAAACACTCCAACAAGCCACAAGAAACAACCTTGGTCTCTAAAAGGCATATGGAGGAGGAATTTCTCGATCATATCATGAACATCTCTCTGCGCAACAAAACTAACATTGAACTCTTACAAGAAAAGAAGCCACACCGTTCTTGCATATTGACAATCCCAAAAGAGATGCTCTAGGCTCGGAAGCGCGAACATAGACATGTGACATGACACGATATGGTGATATGCCAATTTTTGAAAAATGTAGGACACGACACCTTGGGGACACTTTATGTTTCTAATTATATTTATATATAAAATTAAAATGCTAGTTTTTATTTATTATTTAAAAGACTAGTTTTTTTTCATAATTAATTGTTAAATAAGGTTTTTTTTTTTTAAAAAATGAATAAAGAGTAAAGATCATTAAAAGGAAACAAAATAAAAAAATCCTTGGTAATGAAACTCGCGACTAGATGAGATAAGGCCCAAAAGCCCAATTAGAAATAAAAAACTTTAACCTTACGTACTATTATCTTCTCAGCCACCCTTTTTATGCACACCCACCCTCTACATGCACACCCACCTTCTCCCTCCTTAATTCTGCCTTCTCCCTTGCCGATTTTGCCCTTTTCCCTTACCAATTCTACTCTATCTTTGTCGTTGATGTCAACGCTTTTTTCCATCCTTGTCTCCCTTCTTTTGTCGCCACTCTTTCCAACGCCTTCAATTCATTTTAAGGTTTGGATTTTTTCTATGCATGTCCCTAGCCTGTTTTATGCGTGTCATCACGTGTCCCATATTAAAAAAAATAATAATAAAAAAAGAGATAGGTTTTTGCGTGTTTGACACTGTGATACGTGTCAGGAGCATGTCGAATGTGTTGGTCGGTGTCTGACACATGTTAGATAGTGACACTCAACCAAAATTGGTGTCCATGCTTCCTAGGATCCAGGTCTTCCTTCGCCTTTTGACGAACAATACAGCAGAAAGGTCCCACAAGCAAAGTTCTTCTCCCAACAAGCCTAGTGGTAAAAGGGAGACATAGTTTCAATAACTAACTAAGAGGTCATGGGTTCAACCCATGGTGGCCATCTACCTAGGAATTAATTTCATTTGAGTTTCCTTGACACCCAAATGTCGTAGGGTCAGGCAGGTTGTCTCGTGAGATTAGTCGATGTGCGTGTAAGCTGGTCCAAACACTCATGGATACAAAAAAAAAAAAAAAGCCTATCAATCGTGTTCACTCGACCAAGCAAGACTAAGTACTTGAC

mRNA sequence

ATGGAAGTTCAGGGCTCCTCGAAGAAGATGATAGCCACCCAGGCTGAGATGGTCGAGGCTAGGGTTCCAATTCCTTACAGAGATCAGTGCGCTCACTTGTTGATCCCTCTTAATAAATGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAGACGAGCGCCATTCCTACGAGAAGTGTGAATATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAAAAGATCCGTGAGGAACAGGCCAAGTTGAAGAAGGGTATTCATCTCATTCCCAAAACTGCCAATGGCTATATCCTTTCCGCTTCATGATTTCACCCGTAGCATGATTAGGATTTATTTCTTTCTAGAACTATGTCGGTACGGATAATGAAACGCAGAAACTTGTGGATGGCGGCGTTCTATGAAATACTTCGATGACTTACAAGTACCGATTTGTGTGCGATCTAAGCTAGAATCCGAGGAATGAAACAATTTGAGAATTAAGTCAAAGGAAACGCTGTTCTGCACTTCTGCTACTTAAAATTAAATGGAAAATAAGATCATTATGTCCCAAGCTTGGGCTCTGAAAGTATAAGCTACTAATTATTGAAAACAGTATTAAAATTGGCTGAAGTGTTTTGATGAAAATTAATGGGTATATAATAGATTTCTGGTGGGACCTTTTGTATTTACTTGTGAGACTTAAGAGGGTATATGCTCTTATGATTCATCCCAGAAGTATAATATATTTTTTCCTATTCTACCATTTCAATATTAGAAACTTTGGTGTTATGATGGTCCATCCTAAGTTCAAATGATGCTCAAAATTTACGACTTACATAGGTCTTTCTATGGACAAAGGATATATTATAATTTATCACAGTGTGGATGAGCTTTCTCATTATTTAACCTATGCTCACAGTGCCTATTCCTATTGCATATCAAGAAATTGCTGAGTACTCCTCCCTCATATGGGTCAAAAGAGTGCTTGGTATATCACATAGGAAATGATGAATTTGACTTGTCTACTTGTTTAATCTTTAATAGTACTGAGAAATAATAATAGAGCTCTCTCTCTAAAGTAGCCCAAAATCGAAAATTTCTATGCAACATTAGACCACCTCAAGGATACAGTCAATCAGCCTTATTGAATGAAATCGTCTTGACTATTCCTTTGAACAATTTGTTTCCATAACAATTGTTTCATATTTTTTATTAAAGAATGACAAAACCCTAAGAAAACCCAAAGACTTGCAATAATTAATTACACAGTTTCTTGCTAATACAAAGTAGCAACAGACACTGTATCTACACATCAAAAATTCAAGAATGATAACGCTGTTGAATTCTATTCATTGTATCAAGACTTTCACTGTGTTTTCAAGGAACGCTGTTGTGATTGCATATGGCAAGAGGCGTTGTGAGGCACATGTTAATTGCTAGGGTGGTGTCCTATTTGATTATGTTCAATAAGGCACTCCCTTTCACTCATGAAAACTGAAGAAGAGTCAAATGAAGAAGGAAAGGAGTGATGAGGGGGAAGAATTAAAAAAAGAAGAGTGGGAGAAGGGACAAGTTGAAGAAAAGAAGAGAGGGCCAAGGAGGAGGGGGAAGAGTTAGAAAAAGAAGAAGAGTGGAAAGAGGAAGGGTTAGGAAAAATAGAAGAAAAGATGGAGAAGAAAGAGTCAAAAGATAAAGTTCACCTCTTGCACCTCTAGTTTGCAGACGATACTGTACACTTTTGCTCCGAAAAAGAGTTCTTTCTCAATCTGAACTAAATTTCAAATTGTTTTCATTTTTCCTACATGAAAACAGTTGTTCTTGTAAAAAAATCAATCTTTTTTGAAATAATCTCATCCCTTAGGACTGATAGAGGCAAATGTCAAATTTTGAGCATGAAATGTGAGTCTTTCAAATTGAAAAGGTGGGCTAATTTGGTTGGTTGTGAGTTGGAAGTTTCCCTTCATCCTTCTTGAGTTTTTCTCTCGGTCATCCCCTTTAGGATGTTCCTTTTTTATCTGTCTCCCTAAAAAGCATATTTGATGCAACCTAATTCTCAACTCTCAAGTTTCAAATCTTATTCATTGATTAGCCCTTACTAAATACAAACAACTTACTTATATGTGCCAAATTGAAAGGAATGGTCTTTAACTAACTATCTTCCTTAGTTTAAAATAATAAAGCAACTTCAAGACTTATAAAAAATAAAAGACTTGTGATTGTCGAGGATTATTTGGTTTCTCAGTGTTGGTTTTTTCTCTTTATGTGTAGGATTTAAAGTTCAGAAGAAATTTCATTGATGCTGAATTTGATGATTGTATTACTTGTTTTTTTTCTTTTTTCTTTTTTGAAACAACTACTTCCATTGAGAAAAAATGAAAAGAATACAAGGGTATACAAAAAACAGTCAACCCAACAAATCATCCCTACTAGAAAGGAGGTCTAACTAAGAGAAATGTTTCCTAAAGAATAATTACAAAAAAGCTTTGAAACCGAAGCCCAAAGAGACGTGAAATCTTGCCAAAAATCAAACCTCTTGAGGTTCCCTTTCCCTCCCTCTAAACACCTTATCATTCCTCTCTGCCCTAATATCTCGAACCACCGAAAACACTCCAACAAGCCACAAGAAACAACCTTGGTCTCTAAAAGGCATATGGAGGAGGAATTTCTCGATCATATCATGAACATCTCTCTGCGCAACAAAACTAACATTGAACTCTTACAAGAAAAGAAGCCACACCGTTCTTGCATATTGACAATCCCAAAAGAGATGCTCTAGGCTCGGAAGCGCGAACATAGACATGTGACATGACACGATATGGTGATATGCCAATTTTTGAAAAATGTAGGACACGACACCTTGGGGACACTTTATGTTTCTAATTATATTTATATATAAAATTAAAATGCTAGTTTTTATTTATTATTTAAAAGACTAGTTTTTTTTCATAATTAATTGTTAAATAAGGTTTTTTTTTTTTAAAAAATGAATAAAGAGTAAAGATCATTAAAAGGAAACAAAATAAAAAAATCCTTGGTAATGAAACTCGCGACTAGATGAGATAAGGCCCAAAAGCCCAATTAGAAATAAAAAACTTTAACCTTACGTACTATTATCTTCTCAGCCACCCTTTTTATGCACACCCACCCTCTACATGCACACCCACCTTCTCCCTCCTTAATTCTGCCTTCTCCCTTGCCGATTTTGCCCTTTTCCCTTACCAATTCTACTCTATCTTTGTCGTTGATGTCAACGCTTTTTTCCATCCTTGTCTCCCTTCTTTTGTCGCCACTCTTTCCAACGCCTTCAATTCATTTTAAGGTTTGGATTTTTTCTATGCATGTCCCTAGCCTGTTTTATGCGTGTCATCACGTGTCCCATATTAAAAAAAATAATAATAAAAAAAGAGATAGGTTTTTGCGTGTTTGACACTGTGATACGTGTCAGGAGCATGTCGAATGTGTTGGTCGGTGTCTGACACATGTTAGATAGTGACACTCAACCAAAATTGGTGTCCATGCTTCCTAGGATCCAGGTCTTCCTTCGCCTTTTGACGAACAATACAGCAGAAAGGTCCCACAAGCAAAGTTCTTCTCCCAACAAGCCTAGTGGTAAAAGGGAGACATAGTTTCAATAACTAACTAAGAGGTCATGGGTTCAACCCATGGTGGCCATCTACCTAGGAATTAATTTCATTTGAGTTTCCTTGACACCCAAATGTCGTAGGGTCAGGCAGGTTGTCTCGTGAGATTAGTCGATGTGCGTGTAAGCTGGTCCAAACACTCATGGATACAAAAAAAAAAAAAAAGCCTATCAATCGTGTTCACTCGACCAAGCAAGACTAAGTACTTGAC

Coding sequence (CDS)

ATGGAAGTTCAGGGCTCCTCGAAGAAGATGATAGCCACCCAGGCTGAGATGGTCGAGGCTAGGGTTCCAATTCCTTACAGAGATCAGTGCGCTCACTTGTTGATCCCTCTTAATAAATGCCGCCAATCCGAGTTCTACCTCCCATGGAAATGCGAAGACGAGCGCCATTCCTACGAGAAGTGTGAATATGAGCTCGTTATGGAGAGGATGCTTCAGATGCAAAAGATCCGTGAGGAACAGGCCAAGTTGAAGAAGGGTATTCATCTCATTCCCAAAACTGCCAATGGCTATATCCTTTCCGCTTCATGA

Protein sequence

MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEYELVMERMLQMQKIREEQAKLKKGIHLIPKTANGYILSAS

Homology

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BLAST of CsGy5G009200 vs. NCBI nr
Match: XP_004140393.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucumis sativus] >KGN50828.1 hypothetical protein Csa_5G277970 [Cucumis sativus])

HSP 1 Score: 194.5 bits (493), Expect = 1.7e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 96
          CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 95

[Close]

BLAST of CsGy5G009200 vs. NCBI nr
Match: XP_022158769.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Momordica charantia])

HSP 1 Score: 189.5 bits (480), Expect = 5.6e-45
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 96
          CEYELVMERMLQMQKIREE+AKLKKGI LIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKLKKGIPLIPKTAN 95

[Close]

BLAST of CsGy5G009200 vs. NCBI nr
Match: XP_008460206.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucumis melo])

HSP 1 Score: 188.7 bits (478), Expect = 9.6e-45
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          ME QGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK
Sbjct: 1  MEFQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 96
          CEYELVMERMLQMQKIREEQAKLK+GIHLIPK AN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKEGIHLIPKPAN 95

[Close]

BLAST of CsGy5G009200 vs. NCBI nr
Match: XP_022930015.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucurbita moschata] >XP_022994625.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucurbita maxima] >XP_023553585.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.0 bits (471), Expect = 6.2e-44
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 96
          CEYELVMERMLQMQKIREE+AK KKGI LIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEEAKFKKGIPLIPKTAN 95

[Close]

BLAST of CsGy5G009200 vs. NCBI nr
Match: XP_006448039.1 (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Citrus clementina] >XP_006448041.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Citrus clementina] >XP_006492271.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Citrus sinensis] >XP_006492272.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Citrus sinensis] >ESR61279.1 hypothetical protein CICLE_v10017277mg [Citrus clementina] >ESR61280.1 hypothetical protein CICLE_v10017277mg [Citrus clementina] >ESR61281.1 hypothetical protein CICLE_v10017277mg [Citrus clementina] >KDO58623.1 hypothetical protein CISIN_1g034138mg [Citrus sinensis] >KDO58624.1 hypothetical protein CISIN_1g034138mg [Citrus sinensis] >KDO58625.1 hypothetical protein CISIN_1g034138mg [Citrus sinensis] >GAY51776.1 hypothetical protein CUMW_136810 [Citrus unshiu])

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-39
Identity = 87/102 (85.29%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
           MEV GSSKKMIATQ EMVEARVPIPYRDQCAHLLIPLNKCRQ+EFYLPWKCE+ERHSYEK
Sbjct: 1   MEVPGSSKKMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCENERHSYEK 60

Query: 61  CEYELVMERMLQMQKIREEQAKLKKG-------IHLIPKTAN 96
           CEYELVMERMLQMQKIREE+AKLK+        I LIPKTAN
Sbjct: 61  CEYELVMERMLQMQKIREEEAKLKQSQTQKGAPIPLIPKTAN 102

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BLAST of CsGy5G009200 vs. TAIR10
Match: AT2G02050.1 (NADH-ubiquinone oxidoreductase B18 subunit, putative)

HSP 1 Score: 143.3 bits (360), Expect = 8.4e-35
Identity = 73/102 (71.57%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
           MEV GSSKKMIATQ EM  A++ +  RD CAHLLIPLNKCRQ+EFYLPWKCEDERH YEK
Sbjct: 1   MEVPGSSKKMIATQEEMSAAKIALGSRDMCAHLLIPLNKCRQAEFYLPWKCEDERHVYEK 60

Query: 61  CEYELVMERMLQMQKIREEQAKLKK-------GIHLIPKTAN 96
           CEYELVMERML M+KIREE+A  K+        + LIPKTAN
Sbjct: 61  CEYELVMERMLAMKKIREEEALAKQNKLQGNAAVPLIPKTAN 102

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BLAST of CsGy5G009200 vs. Swiss-Prot
Match: sp|Q9SKC9|NDUB7_ARATH (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Arabidopsis thaliana OX=3702 GN=At2g02050 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.5e-33
Identity = 73/102 (71.57%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
           MEV GSSKKMIATQ EM  A++ +  RD CAHLLIPLNKCRQ+EFYLPWKCEDERH YEK
Sbjct: 1   MEVPGSSKKMIATQEEMSAAKIALGSRDMCAHLLIPLNKCRQAEFYLPWKCEDERHVYEK 60

Query: 61  CEYELVMERMLQMQKIREEQAKLKK-------GIHLIPKTAN 96
           CEYELVMERML M+KIREE+A  K+        + LIPKTAN
Sbjct: 61  CEYELVMERMLAMKKIREEEALAKQNKLQGNAAVPLIPKTAN 102

[Close]

BLAST of CsGy5G009200 vs. Swiss-Prot
Match: sp|Q54V61|NDUB7_DICDI (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Dictyostelium discoideum OX=44689 GN=ndufb7 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.7e-16
Identity = 37/81 (45.68%), Postives = 58/81 (71.60%), Query Frame = 0


Query: 7  SKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEYELV 66
          S+KMIATQ +  +  +P+ +RD CAHLLIPLN CR S +Y PWKC DE+H+YE C+Y+  
Sbjct: 15 SRKMIATQQQCEDKNLPLSFRDYCAHLLIPLNDCRVSTYYAPWKCMDEKHAYEGCQYDEY 74

Query: 67 MERMLQMQKIREEQAKLKKGI 88
          + R ++  + ++E  ++K+ +
Sbjct: 75 LYRKIKKSE-QDEAERIKREV 94

[Close]

BLAST of CsGy5G009200 vs. Swiss-Prot
Match: sp|Q0MQE4|NDUB7_PANTR (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pan troglodytes OX=9598 GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 57.8 bits (138), Expect = 8.3e-08
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEYELVM 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+   +
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFXACKQERHDWDYCEHRDYV 96

Query: 68  ERMLQMQKIR 78
            RM + ++ R
Sbjct: 97  MRMKEFERER 106

[Close]

BLAST of CsGy5G009200 vs. Swiss-Prot
Match: sp|Q0MQE3|NDUB7_GORGO (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-07
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEYELVM 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+   +
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFLACKQERHDWDYCEHRDYV 96

Query: 68  ERMLQMQKIR 78
            RM + ++ R
Sbjct: 97  MRMKEFERER 106

[Close]

BLAST of CsGy5G009200 vs. Swiss-Prot
Match: sp|Q0MQE2|NDUB7_PONPY (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pongo pygmaeus OX=9600 GN=NDUFB7 PE=2 SV=3)

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-07
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 8   KKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEYELVM 67
           ++M+ATQ EM++A++ +  RD CAH LI L KC++  F     C+ ERH ++ CE+   +
Sbjct: 37  REMVATQQEMMDAQLRLQLRDYCAHYLIRLLKCKRDSFPNFLACKQERHDWDYCEHRDYV 96

Query: 68  ERMLQMQKIR 78
            RM + ++ R
Sbjct: 97  MRMKEFERER 106

[Close]

BLAST of CsGy5G009200 vs. TrEMBL
Match: tr|A0A0A0KMK8|A0A0A0KMK8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G277970 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK
Sbjct: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 96
          CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 95

[Close]

BLAST of CsGy5G009200 vs. TrEMBL
Match: tr|A0A1S3CBZ9|A0A1S3CBZ9_CUCME (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucumis melo OX=3656 GN=LOC103499092 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.3e-45
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          ME QGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK
Sbjct: 1  MEFQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 96
          CEYELVMERMLQMQKIREEQAKLK+GIHLIPK AN
Sbjct: 61 CEYELVMERMLQMQKIREEQAKLKEGIHLIPKPAN 95

[Close]

BLAST of CsGy5G009200 vs. TrEMBL
Match: tr|A0A2N9GUF3|A0A2N9GUF3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33908 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.7e-40
Identity = 83/95 (87.37%), Postives = 90/95 (94.74%), Query Frame = 0


Query: 1  MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
          MEV+GSSKKMIATQAEMVEA+VPIPYRDQCAHLLIPLNKCRQ+E YLPWKCE ERHSYEK
Sbjct: 1  MEVEGSSKKMIATQAEMVEAKVPIPYRDQCAHLLIPLNKCRQAELYLPWKCETERHSYEK 60

Query: 61 CEYELVMERMLQMQKIREEQAKLKKGIHLIPKTAN 96
          CEYELVMERML+MQKIRE++AKLK+ I LIP TAN
Sbjct: 61 CEYELVMERMLKMQKIREQEAKLKRPISLIPNTAN 95

[Close]

BLAST of CsGy5G009200 vs. TrEMBL
Match: tr|V4UAW1|V4UAW1_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017277mg PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.0e-39
Identity = 87/102 (85.29%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
           MEV GSSKKMIATQ EMVEARVPIPYRDQCAHLLIPLNKCRQ+EFYLPWKCE+ERHSYEK
Sbjct: 1   MEVPGSSKKMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCENERHSYEK 60

Query: 61  CEYELVMERMLQMQKIREEQAKLKKG-------IHLIPKTAN 96
           CEYELVMERMLQMQKIREE+AKLK+        I LIPKTAN
Sbjct: 61  CEYELVMERMLQMQKIREEEAKLKQSQTQKGAPIPLIPKTAN 102

[Close]

BLAST of CsGy5G009200 vs. TrEMBL
Match: tr|A0A067EXL1|A0A067EXL1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034138mg PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.0e-39
Identity = 87/102 (85.29%), Postives = 91/102 (89.22%), Query Frame = 0


Query: 1   MEVQGSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEK 60
           MEV GSSKKMIATQ EMVEARVPIPYRDQCAHLLIPLNKCRQ+EFYLPWKCE+ERHSYEK
Sbjct: 1   MEVPGSSKKMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCENERHSYEK 60

Query: 61  CEYELVMERMLQMQKIREEQAKLKKG-------IHLIPKTAN 96
           CEYELVMERMLQMQKIREE+AKLK+        I LIPKTAN
Sbjct: 61  CEYELVMERMLQMQKIREEEAKLKQSQTQKGAPIPLIPKTAN 102

The following BLAST results are available for this feature:

BLAST of CsGy5G009200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140393.1	1.7e-46	100.00	PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucumis ...	[more]
XP_022158769.1	5.6e-45	97.89	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Momordica charantia...	[more]
XP_008460206.1	9.6e-45	96.84	PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucumis ...	[more]
XP_022930015.1	6.2e-44	95.79	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Cucurbita moschata]...	[more]
XP_006448039.1	1.6e-39	85.29	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 [Citrus clementina] ...	[more]

BLAST of CsGy5G009200 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G02050.1	8.4e-35	71.57	NADH-ubiquinone oxidoreductase B18 subunit, putative	[more]

BLAST of CsGy5G009200 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SKC9\|NDUB7_ARATH	1.5e-33	71.57	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Arabidopsis thali...	[more]
sp\|Q54V61\|NDUB7_DICDI	3.7e-16	45.68	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Dictyostelium dis...	[more]
sp\|Q0MQE4\|NDUB7_PANTR	8.3e-08	38.57	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pan troglodytes O...	[more]
sp\|Q0MQE3\|NDUB7_GORGO	1.1e-07	38.57	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Gorilla gorilla g...	[more]
sp\|Q0MQE2\|NDUB7_PONPY	1.1e-07	38.57	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Pongo pygmaeus OX...	[more]

BLAST of CsGy5G009200 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KMK8\|A0A0A0KMK8_CUCSA	1.2e-46	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G277970 PE=4 SV=1	[more]
tr\|A0A1S3CBZ9\|A0A1S3CBZ9_CUCME	6.3e-45	96.84	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS=Cucumis melo OX=3...	[more]
tr\|A0A2N9GUF3\|A0A2N9GUF3_FAGSY	4.7e-40	87.37	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33908 PE=4 SV=1	[more]
tr\|V4UAW1\|V4UAW1_9ROSI	1.0e-39	85.29	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017277mg PE=4 ...	[more]
tr\|A0A067EXL1\|A0A067EXL1_CITSI	1.0e-39	85.29	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034138mg PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008137	NADH dehydrogenase (ubiquinone) activity
GO:0003954	NADH dehydrogenase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005739	mitochondrion

Vocabulary: **INTERPRO**
Term	Definition
IPR008698	NADH_UbQ_OxRdtase_B18_su

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0003954	NADH dehydrogenase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G009200.1	CsGy5G009200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008698	NADH:ubiquinone oxidoreductase, B18 subunit	PFAM	PF05676	NDUF_B7	coord: 11..73 e-value: 4.5E-30 score: 103.1
IPR008698	NADH:ubiquinone oxidoreductase, B18 subunit	PANTHER	PTHR20900	NADH:UBIQUINONE OXIDOREDUCTASE B18-LIKE SUBUNIT	coord: 5..85
None	No IPR available	PROSITE	PS51808	CHCH	coord: 27..69 score: 13.601

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G009200	Cla016936	Watermelon (97103) v1	cgybwmB410
CsGy5G009200	Csa5G277970	Cucumber (Chinese Long) v2	cgybcuB231
CsGy5G009200	MELO3C022540	Melon (DHL92) v3.5.1	cgybmeB312
CsGy5G009200	ClCG11G000640	Watermelon (Charleston Gray)	cgybwcgB329
CsGy5G009200	CSPI05G12260	Wild cucumber (PI 183967)	cgybcpiB236
CsGy5G009200	CmaCh04G000010	Cucurbita maxima (Rimu)	cgybcmaB664
CsGy5G009200	CmaCh04G019470	Cucurbita maxima (Rimu)	cgybcmaB670
CsGy5G009200	CmoCh04G000020	Cucurbita moschata (Rifu)	cgybcmoB641
CsGy5G009200	Lsi11G000470	Bottle gourd (USVL1VR-Ls)	cgyblsiB311
CsGy5G009200	Cp4.1LG01g06490	Cucurbita pepo (Zucchini)	cgybcpeB642
CsGy5G009200	MELO3C022540.2	Melon (DHL92) v3.6.1	cgybmedB311
CsGy5G009200	Cla97C11G206950	Watermelon (97103) v2	cgybwmbB342

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G009200	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G009200	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G009200	Cucumber (Chinese Long) v3	cgybcucB232