CsGy4G008640 (gene) Cucumber (Gy14) v2

NameCsGy4G008640
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptiontransmembrane protein
LocationChr4 : 6642237 .. 6642701 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCAGGGACGAGCAACAATCAGAAAGCCCTAGATTCGAGAGACATGGTCAACAGAGGCGGGGTTGAGCTAATTAGGAATTGCGATCTTCCGCCGCCGCAGAAGGTATTCAAGAGTGGGATGGAGGAAAAAATGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCAAGAGAGGCGGAGAGGAAGGCGGCAAAATTGATGGAGGAAAGGGATTGTATTAGTAGGGCTTTTGAAGACGAGGCCAGAATGGTGTTCTGTTATCGACAATCCCTCAAATTGCTGGAGCTCAGGGTTTTCAAGTTGCAGAAACAAGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAAAGTGATAAGAATGGTGGAAATGGAGGAATGAAATGGGTTTGGGCTTTGGCTATTTGTTTGAGTGTTGTTGGAGTTGGCTTTCTTTTGGGCTATACATGTAATCCTTCATGA

mRNA sequence

ATGAAGGCAGGGACGAGCAACAATCAGAAAGCCCTAGATTCGAGAGACATGGTCAACAGAGGCGGGGTTGAGCTAATTAGGAATTGCGATCTTCCGCCGCCGCAGAAGGTATTCAAGAGTGGGATGGAGGAAAAAATGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCAAGAGAGGCGGAGAGGAAGGCGGCAAAATTGATGGAGGAAAGGGATTGTATTAGTAGGGCTTTTGAAGACGAGGCCAGAATGGTGTTCTGTTATCGACAATCCCTCAAATTGCTGGAGCTCAGGGTTTTCAAGTTGCAGAAACAAGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAAAGTGATAAGAATGGTGGAAATGGAGGAATGAAATGGGTTTGGGCTTTGGCTATTTGTTTGAGTGTTGTTGGAGTTGGCTTTCTTTTGGGCTATACATGTAATCCTTCATGA

Coding sequence (CDS)

ATGAAGGCAGGGACGAGCAACAATCAGAAAGCCCTAGATTCGAGAGACATGGTCAACAGAGGCGGGGTTGAGCTAATTAGGAATTGCGATCTTCCGCCGCCGCAGAAGGTATTCAAGAGTGGGATGGAGGAAAAAATGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCAAGAGAGGCGGAGAGGAAGGCGGCAAAATTGATGGAGGAAAGGGATTGTATTAGTAGGGCTTTTGAAGACGAGGCCAGAATGGTGTTCTGTTATCGACAATCCCTCAAATTGCTGGAGCTCAGGGTTTTCAAGTTGCAGAAACAAGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAAAGTGATAAGAATGGTGGAAATGGAGGAATGAAATGGGTTTGGGCTTTGGCTATTTGTTTGAGTGTTGTTGGAGTTGGCTTTCTTTTGGGCTATACATGTAATCCTTCATGA

Protein sequence

MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVFKLQKQEEEEEEEEEEESDKNGGNGGMKWVWALAICLSVVGVGFLLGYTCNPS
BLAST of CsGy4G008640 vs. NCBI nr
Match: XP_011653361.1 (PREDICTED: uncharacterized protein LOC105435202 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 8.5e-53
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0

Query: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60
           MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR
Sbjct: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVFXXXXXXXXXXXXXXXXXX 120
           EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVFXXXXXXXXXXXXXXXXXX
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVFXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXSVVGVGFLLGYTCNPS 155
           XXXXXXXXXXXXXXXXXXSVVGVGFLLGYTCNPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXSVVGVGFLLGYTCNPS 154

BLAST of CsGy4G008640 vs. NCBI nr
Match: KGN53662.1 (hypothetical protein Csa_4G097690 [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 6.9e-47
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0

Query: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60
           MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR
Sbjct: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVF 103
           EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVF
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVF 102

BLAST of CsGy4G008640 vs. NCBI nr
Match: XP_008455680.1 (PREDICTED: uncharacterized protein LOC103495794 [Cucumis melo])

HSP 1 Score: 186.8 bits (473), Expect = 5.5e-44
Identity = 131/156 (83.97%), Postives = 137/156 (87.82%), Query Frame = 0

Query: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60
           MKA TSNN+++LDSRDMV R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1   MKAATSNNRQSLDSRDMVQRDGVELIRNCDLPPPQKVFKSGMEEKIELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLE--LRVFXXXXXXXXXXXXXXXX 120
           EAERKAAKLMEERDCISRAFEDEAR++FCYRQSLKLLE      XXXXXXXXXXXXXXXX
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLEXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXSVVGVGFLLGYTCNPS 155
           XXXXXXXXXX          SVVGVGFLLGYTCNPS
Sbjct: 121 XXXXXXXXXXKWVWALAICLSVVGVGFLLGYTCNPS 156

BLAST of CsGy4G008640 vs. NCBI nr
Match: XP_022970087.1 (uncharacterized protein LOC111469054 [Cucurbita maxima])

HSP 1 Score: 140.2 bits (352), Expect = 5.9e-30
Identity = 79/118 (66.95%), Postives = 90/118 (76.27%), Query Frame = 0

Query: 7   NNQKALDSRDMV----NRGGVELIRNCDLPPPQKVFKS-------------------GME 66
           +N +ALDS DM+     + GV+LIRNCDLPPPQK+F +                   GME
Sbjct: 60  SNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGAMAARGRGREEVEAGGME 119

Query: 67  EKMELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRV 102
           EK+ELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEAR++FCYRQSLKL+ELRV
Sbjct: 120 EKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRV 177

BLAST of CsGy4G008640 vs. NCBI nr
Match: XP_023545135.1 (uncharacterized protein LOC111804522 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 140.2 bits (352), Expect = 5.9e-30
Identity = 79/118 (66.95%), Postives = 90/118 (76.27%), Query Frame = 0

Query: 7   NNQKALDSRDMV----NRGGVELIRNCDLPPPQKVFKS-------------------GME 66
           +N +ALDS DM+     + GV+LIRNCDLPPPQK+F +                   GME
Sbjct: 18  SNPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGAMAARGRGREEVETGGME 77

Query: 67  EKMELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRV 102
           EK+ELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEAR++FCYRQSLKL+ELRV
Sbjct: 78  EKLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRV 135

BLAST of CsGy4G008640 vs. TAIR10
Match: AT1G01240.1 (unknown protein)

HSP 1 Score: 47.0 bits (110), Expect = 1.2e-05
Identity = 41/124 (33.06%), Postives = 52/124 (41.94%), Query Frame = 0

Query: 26  IRNCDLPPPQKVFKS----------------------------------GMEE------- 85
           I+NCDLPPPQK+ KS                                  G  E       
Sbjct: 141 IQNCDLPPPQKLHKSIHSSSGEKGFKTAVKSPWKQGVWKDRFERSLSYNGSTESKNTSPM 200

Query: 86  ---------KMELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARMVFCYRQSLK 100
                    K +LL+ALR SQTRAREAER A +   E+D +      +A  +  Y+Q LK
Sbjct: 201 SSPRSDDLSKGQLLEALRHSQTRAREAERAAREACAEKDRVITILLKQASQMLAYKQWLK 260

BLAST of CsGy4G008640 vs. TAIR10
Match: AT2G46550.1 (unknown protein)

HSP 1 Score: 42.4 bits (98), Expect = 3.0e-04
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0

Query: 45  KMELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLEL 100
           K ELL+ALR SQTRAREAE  A +   E++ + +    +A  +F Y+Q L+LL+L
Sbjct: 263 KSELLEALRRSQTRAREAENMAKEAYAEKEHLVKILLKQAAELFGYKQWLQLLQL 317

BLAST of CsGy4G008640 vs. TrEMBL
Match: tr|A0A0A0KZ57|A0A0A0KZ57_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G097690 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.6e-47
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0

Query: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60
           MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR
Sbjct: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVF 103
           EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVF
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVF 102

BLAST of CsGy4G008640 vs. TrEMBL
Match: tr|A0A1S3C2P7|A0A1S3C2P7_CUCME (uncharacterized protein LOC103495794 OS=Cucumis melo OX=3656 GN=LOC103495794 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.6e-44
Identity = 131/156 (83.97%), Postives = 137/156 (87.82%), Query Frame = 0

Query: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60
           MKA TSNN+++LDSRDMV R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1   MKAATSNNRQSLDSRDMVQRDGVELIRNCDLPPPQKVFKSGMEEKIELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLE--LRVFXXXXXXXXXXXXXXXX 120
           EAERKAAKLMEERDCISRAFEDEAR++FCYRQSLKLLE      XXXXXXXXXXXXXXXX
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLEXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXSVVGVGFLLGYTCNPS 155
           XXXXXXXXXX          SVVGVGFLLGYTCNPS
Sbjct: 121 XXXXXXXXXXKWVWALAICLSVVGVGFLLGYTCNPS 156

BLAST of CsGy4G008640 vs. TrEMBL
Match: tr|A0A2C9URM0|A0A2C9URM0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G097300 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.6e-15
Identity = 57/127 (44.88%), Postives = 72/127 (56.69%), Query Frame = 0

Query: 11  ALDSRDMV------NRGGVELIRNCDLPPPQKVF-------------------------- 70
           A+D  DM+       + G++L++NCDLPPP KVF                          
Sbjct: 14  AVDENDMLMGALLSQKSGIDLLQNCDLPPPVKVFSGWDTTVISPVNRVFGLMSREEDNTG 73

Query: 71  ---KSGMEEKMELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARMVFCYRQSLK 103
                G  EK+ELLKALRLSQTRAREAE+KAA L++ERD IS A   E+  +F YRQ L+
Sbjct: 74  FDINGGENEKLELLKALRLSQTRAREAEKKAANLVKERDFISNALLRESMQLFAYRQWLR 133

BLAST of CsGy4G008640 vs. TrEMBL
Match: tr|A0A251NST4|A0A251NST4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G193900 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.3e-14
Identity = 63/152 (41.45%), Postives = 78/152 (51.32%), Query Frame = 0

Query: 1   MKAGTSN----NQKALDSRDMV----------NRGGVELIRNCDLPPPQKVF-------- 60
           M   TSN    N KA+D  +M+             G++LI+NCDLPPP KVF        
Sbjct: 1   MAGWTSNNPKLNPKAVDGNEMLKGLNLTPVSHKSSGLDLIQNCDLPPPMKVFTGSDNKTV 60

Query: 61  -----------------------------KSGMEEKMELLKALRLSQTRAREAERKAAKL 102
                                          G  EK+ELLKALRLSQTRAREAE+KA KL
Sbjct: 61  LSSMNRACSMSMTQEDDNRDEFDMCGNRGDGGENEKLELLKALRLSQTRAREAEKKAEKL 120

BLAST of CsGy4G008640 vs. TrEMBL
Match: tr|A0A2N9EBV0|A0A2N9EBV0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4369 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.0e-14
Identity = 55/131 (41.98%), Postives = 72/131 (54.96%), Query Frame = 0

Query: 8   NQKALDSRDMV------NRGGVELIRNCDLPPPQKVF----------------------- 67
           N KA D  +MV       + G++L++NCDLPPP KVF                       
Sbjct: 13  NSKAFDGNEMVTGFELSQKPGIDLMQNCDLPPPMKVFTGSDKTVMSSMNRIFGMMGKEDE 72

Query: 68  --------KSGMEEKMELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARMVFCY 102
                     G  EK+ELLKALR SQTRAREAE+KAA L+ E++C+S A  +EA  +F  
Sbjct: 73  NEEFNVYRSGGENEKLELLKALRSSQTRAREAEKKAASLVNEKNCLSNALLEEATRLFAC 132

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011653361.18.5e-53100.00PREDICTED: uncharacterized protein LOC105435202 [Cucumis sativus][more]
KGN53662.16.9e-47100.00hypothetical protein Csa_4G097690 [Cucumis sativus][more]
XP_008455680.15.5e-4483.97PREDICTED: uncharacterized protein LOC103495794 [Cucumis melo][more]
XP_022970087.15.9e-3066.95uncharacterized protein LOC111469054 [Cucurbita maxima][more]
XP_023545135.15.9e-3066.95uncharacterized protein LOC111804522 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT1G01240.11.2e-0533.06unknown protein[more]
AT2G46550.13.0e-0447.27unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KZ57|A0A0A0KZ57_CUCSA4.6e-47100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G097690 PE=4 SV=1[more]
tr|A0A1S3C2P7|A0A1S3C2P7_CUCME3.6e-4483.97uncharacterized protein LOC103495794 OS=Cucumis melo OX=3656 GN=LOC103495794 PE=... [more]
tr|A0A2C9URM0|A0A2C9URM0_MANES4.6e-1544.88Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G097300 PE=4 SV=... [more]
tr|A0A251NST4|A0A251NST4_PRUPE1.3e-1441.45Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G193900 PE=4 SV=1[more]
tr|A0A2N9EBV0|A0A2N9EBV0_FAGSY3.0e-1441.98Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4369 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy4G008640.1CsGy4G008640.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 45..79
NoneNo IPR availableCOILSCoilCoilcoord: 94..121
NoneNo IPR availablePANTHERPTHR33868:SF3SUBFAMILY NOT NAMEDcoord: 21..39
NoneNo IPR availablePANTHERPTHR33868FAMILY NOT NAMEDcoord: 21..39
coord: 43..150
NoneNo IPR availablePANTHERPTHR33868:SF3SUBFAMILY NOT NAMEDcoord: 43..150