CmoCh04G009010 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCAGTCCACCATCGCCGGCTGGCTGAACAATTACAACAACCTCAAATCTAATCCCGAAGCCCTAGATTCCACCGACATGCTCCTCGAATTTCCCTACAAGCCCTGCGTTGACCTAATTCGGAATTGCGATCTTCCGCCGCCGCAGAAGTTATTCACGGCCTCCGACAAGGGGGCGATGGCGGCTAGAGGTAGAGGTCGGGAAGAAGTGGAAACAGGGGGGATGGAGGAGAAATTGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAGGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTATAAGTAGGGCTTTTGAAGATGAGGCGAGATTGATCTTCTGTTACCGACAGTCGCTGAAATTGATGGAGCTCAGAGTTTCCAAGTTGAAGAAGAGGAAAGAAGAAGAAGAAGACAATGGCAATGGCAATCGAGGAGTGAAATGGGTTTGGGCTTTGGCAATCTGCTTGAGTGCTGTGGGAGTCGGCATTCTCTTGGGCTATACTGCTTGA ATGAAGCAGTCCACCATCGCCGGCTGGCTGAACAATTACAACAACCTCAAATCTAATCCCGAAGCCCTAGATTCCACCGACATGCTCCTCGAATTTCCCTACAAGCCCTGCGTTGACCTAATTCGGAATTGCGATCTTCCGCCGCCGCAGAAGTTATTCACGGCCTCCGACAAGGGGGCGATGGCGGCTAGAGGTAGAGGTCGGGAAGAAGTGGAAACAGGGGGGATGGAGGAGAAATTGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAGGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTATAAGTAGGGCTTTTGAAGATGAGGCGAGATTGATCTTCTGTTACCGACAGTCGCTGAAATTGATGGAGCTCAGAGTTTCCAAGTTGAAGAAGAGGAAAGAAGAAGAAGAAGACAATGGCAATGGCAATCGAGGAGTGAAATGGGTTTGGGCTTTGGCAATCTGCTTGAGTGCTGTGGGAGTCGGCATTCTCTTGGGCTATACTGCTTGA ATGAAGCAGTCCACCATCGCCGGCTGGCTGAACAATTACAACAACCTCAAATCTAATCCCGAAGCCCTAGATTCCACCGACATGCTCCTCGAATTTCCCTACAAGCCCTGCGTTGACCTAATTCGGAATTGCGATCTTCCGCCGCCGCAGAAGTTATTCACGGCCTCCGACAAGGGGGCGATGGCGGCTAGAGGTAGAGGTCGGGAAGAAGTGGAAACAGGGGGGATGGAGGAGAAATTGGAGCTGTTGAAGGCTCTGAGACTGTCGCAAACGAGGGCGAGAGAGGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAAAGGGATTGTATAAGTAGGGCTTTTGAAGATGAGGCGAGATTGATCTTCTGTTACCGACAGTCGCTGAAATTGATGGAGCTCAGAGTTTCCAAGTTGAAGAAGAGGAAAGAAGAAGAAGAAGACAATGGCAATGGCAATCGAGGAGTGAAATGGGTTTGGGCTTTGGCAATCTGCTTGAGTGCTGTGGGAGTCGGCATTCTCTTGGGCTATACTGCTTGA
BLAST of CmoCh04G009010 vs. TrEMBL
Match: A0A0A0KZ57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097690 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 1.8e-33 Identity = 85/130 (65.38%), Postives = 100/130 (76.92%), Query Frame = 1
BLAST of CmoCh04G009010 vs. TrEMBL
Match: B9T781_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0338110 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 3.3e-27 Identity = 86/210 (40.95%), Postives = 116/210 (55.24%), Query Frame = 1
BLAST of CmoCh04G009010 vs. TrEMBL
Match: A0A067K0L4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18666 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.5e-24 Identity = 77/182 (42.31%), Postives = 106/182 (58.24%), Query Frame = 1
BLAST of CmoCh04G009010 vs. TrEMBL
Match: A0A061DPX5_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_001035 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.9e-23 Identity = 82/208 (39.42%), Postives = 112/208 (53.85%), Query Frame = 1
BLAST of CmoCh04G009010 vs. TrEMBL
Match: W9S4F0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019809 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.2e-21 Identity = 72/157 (45.86%), Postives = 96/157 (61.15%), Query Frame = 1
BLAST of CmoCh04G009010 vs. TAIR10
Match: AT1G01240.1 (AT1G01240.1 unknown protein) HSP 1 Score: 69.3 bits (168), Expect = 2.7e-12 Identity = 63/202 (31.19%), Postives = 89/202 (44.06%), Query Frame = 1
BLAST of CmoCh04G009010 vs. TAIR10
Match: AT2G46550.1 (AT2G46550.1 unknown protein) HSP 1 Score: 53.1 bits (126), Expect = 2.0e-07 Identity = 43/139 (30.94%), Postives = 68/139 (48.92%), Query Frame = 1
BLAST of CmoCh04G009010 vs. NCBI nr
Match: gi|778691835|ref|XP_011653361.1| (PREDICTED: uncharacterized protein LOC105435202 [Cucumis sativus]) HSP 1 Score: 193.4 bits (490), Expect = 3.5e-46 Identity = 109/167 (65.27%), Postives = 124/167 (74.25%), Query Frame = 1
BLAST of CmoCh04G009010 vs. NCBI nr
Match: gi|659111298|ref|XP_008455680.1| (PREDICTED: uncharacterized protein LOC103495794 [Cucumis melo]) HSP 1 Score: 190.7 bits (483), Expect = 2.3e-45 Identity = 108/169 (63.91%), Postives = 123/169 (72.78%), Query Frame = 1
BLAST of CmoCh04G009010 vs. NCBI nr
Match: gi|700198504|gb|KGN53662.1| (hypothetical protein Csa_4G097690 [Cucumis sativus]) HSP 1 Score: 150.6 bits (379), Expect = 2.6e-33 Identity = 85/130 (65.38%), Postives = 100/130 (76.92%), Query Frame = 1
BLAST of CmoCh04G009010 vs. NCBI nr
Match: gi|645219327|ref|XP_008235197.1| (PREDICTED: uncharacterized protein LOC103334047 [Prunus mume]) HSP 1 Score: 134.0 bits (336), Expect = 2.5e-28 Identity = 90/216 (41.67%), Postives = 117/216 (54.17%), Query Frame = 1
BLAST of CmoCh04G009010 vs. NCBI nr
Match: gi|255587017|ref|XP_002534100.1| (PREDICTED: uncharacterized protein LOC8278149 [Ricinus communis]) HSP 1 Score: 129.8 bits (325), Expect = 4.7e-27 Identity = 86/210 (40.95%), Postives = 116/210 (55.24%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|