ClCG10G008400 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG10G008400
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Protein phosphatase 1 regulatory subunit 14B
Location	CG_Chr10 : 17937361 .. 17937831 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCGGCGACGAGCTACAATACTAAAGCCCTAGATTCGACGATCCACAGAGCCGGGGTTGAGCTAATTCGGAATTGCGATCTGCCGCCGCCGCAGAAGGTATTCAAGAGTGGGATGGAGGAGAAATTGGAACTATTGAAGGCTCTAAGACTGTCGCAAACGAGGGCGAGAGAAGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAGAGGGATTGTCTTAGTAGGGCTTTTGAAGATGAAGCCAGATTGATTTTCTGTTATCGACAGTCGGTCAAATTGCTGGAGCTTAGGGTTTCGAAGTTGCAGAAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGGATAAAAATGGTGGTAGTGGAGGAATGAAATGGGTTTGGGCTTTGGCCATTTGTTTGAGTGTTGTTGGAGTCGGCTTTCTTTTCGGCTATACATGTAATGATTCATGA

mRNA sequence

ATGAAGGCGGCGACGAGCTACAATACTAAAGCCCTAGATTCGACGATCCACAGAGCCGGGGTTGAGCTAATTCGGAATTGCGATCTGCCGCCGCCGCAGAAGGTATTCAAGAGTGGGATGGAGGAGAAATTGGAACTATTGAAGGCTCTAAGACTGTCGCAAACGAGGGCGAGAGAAGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAGAGGGATTGTCTTAGTAGGGCTTTTGAAGATGAAGCCAGATTGATTTTCTGTTATCGACAGTCGGTCAAATTGCTGGAGCTTAGGGTTTCGAAGTTGCAGAAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGGATAAAAATGGTGGTAGTGGAGGAATGAAATGGGTTTGGGCTTTGGCCATTTGTTTGAGTGTTGTTGGAGTCGGCTTTCTTTTCGGCTATACATGTAATGATTCATGA

Coding sequence (CDS)

ATGAAGGCGGCGACGAGCTACAATACTAAAGCCCTAGATTCGACGATCCACAGAGCCGGGGTTGAGCTAATTCGGAATTGCGATCTGCCGCCGCCGCAGAAGGTATTCAAGAGTGGGATGGAGGAGAAATTGGAACTATTGAAGGCTCTAAGACTGTCGCAAACGAGGGCGAGAGAAGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAGAGGGATTGTCTTAGTAGGGCTTTTGAAGATGAAGCCAGATTGATTTTCTGTTATCGACAGTCGGTCAAATTGCTGGAGCTTAGGGTTTCGAAGTTGCAGAAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGGATAAAAATGGTGGTAGTGGAGGAATGAAATGGGTTTGGGCTTTGGCCATTTGTTTGAGTGTTGTTGGAGTCGGCTTTCTTTTCGGCTATACATGTAATGATTCATGA

Protein sequence

MKAATSYNTKALDSTIHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEEEEEEERDKNGGSGGMKWVWALAICLSVVGVGFLFGYTCNDS

Homology

[Close]

BLAST of ClCG10G008400 vs. TrEMBL
Match: A0A0A0KZ57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097690 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.9e-51
Identity = 106/125 (84.80%), Postives = 116/125 (92.80%), Query Frame = 1


Query: 1   MKAATSYNTKALDST--IHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAR 60
           MKA TS N KALDS   ++R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEEEEE 120
           EAERKAAKLMEERDC+SRAFEDEAR++FCYRQS+KLLELRV KLQK+EEEEEEEEEEEEE
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVFKLQKQEEEEEEEEEEEEE 120

Query: 121 EERDK 124
           EE ++
Sbjct: 121 EEEEE 125

[Close]

BLAST of ClCG10G008400 vs. TrEMBL
Match: A0A0A0KZ57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097690 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.4e-26
Identity = 88/196 (44.90%), Postives = 103/196 (52.55%), Query Frame = 1


Query: 1   MKAATSYNTKALDST--IHRAGVELIRNCDLPP--------------------PQKVFKS 60
           MKA TS N KALDS   ++R GVELIRNCDLPP                      +    
Sbjct: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60

Query: 61  GMEEKLELLKALRLSQTRAREAE-------RKAAKLME-----------ERDCLSRAFED 120
             E K   L   R   +RA E E       R++ KL+E           E +      E+
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVFKLQKQEEEEEEEEEEEEE 120

Query: 121 EARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEEEEEEERDKNGGSGGMKWVWALAICL 157
           E        +  +  E    + ++EEEEEEEEEEEEEEEE DKNGG+GGMKWVWALAICL
Sbjct: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEESDKNGGNGGMKWVWALAICL 180

HSP 2 Score: 115.2 bits (287), Expect = 7.4e-23
Identity = 70/163 (42.94%), Postives = 92/163 (56.44%), Query Frame = 1


Query: 20  GVELIRNCDLPPPQKVFKSG------------------------------MEEKLELLKA 79
           G++L++NCDLPPP KVF                                   EKLELLKA
Sbjct: 13  GMDLMQNCDLPPPMKVFTRSDRKTVLPSMNRAFGLMGTREGESQSKFDGENHEKLELLKA 72

Query: 80  LRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEE 139
           LR SQTRAREAE+KA  L +ERDCLS A  +EA+ +F +RQ V+LLEL+VS L  +  E+
Sbjct: 73  LRFSQTRAREAEKKAEVLAKERDCLSNAVFEEAKQLFGHRQLVRLLELQVSSLYSKWAEK 132

Query: 140 EEE---EEEEEEEERDKNGGSGGMKWVWALAICLSVVGVGFLF 150
           E +    +++++ E D +G      WV ALA C  + GVGF F
Sbjct: 133 ERKGINRDDDDDGEDDDDGVC--FTWVVALAFCFGIAGVGFAF 173

[Close]

BLAST of ClCG10G008400 vs. TrEMBL
Match: B9H4Q1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s07230g PE=4 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 2.1e-22
Identity = 73/175 (41.71%), Postives = 95/175 (54.29%), Query Frame = 1


Query: 19  AGVELIRNCDLPPPQKVFK-------------------------------SGME--EKLE 78
           +G +L++NCDLPPP KVF                                SG E  EKLE
Sbjct: 32  SGTDLLQNCDLPPPLKVFSWSDRTVISSMNRGFSMTRREHDHDDFDVYSGSGGENYEKLE 91

Query: 79  LLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKE 138
           LLKALRLSQTRAREAERKAA L++ERDC+++A   E+  +F YRQ V+LLE +V K Q E
Sbjct: 92  LLKALRLSQTRAREAERKAASLVKERDCVAKALLHESFQLFVYRQWVRLLEFQVLKAQTE 151

Query: 139 EEEEE----------EEEEEEEEEERDKNGGSGGMKWVWALAICLSVVGVGFLFG 151
            +++E          +E ++  EEE     GS       AL  C+ +VG+G  FG
Sbjct: 152 RQQQEKKLCCGCGRSKEAKDHSEEEEALCDGSRESWICVALTFCMGIVGLGLAFG 206

[Close]

BLAST of ClCG10G008400 vs. TrEMBL
Match: A0A022QWT4_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a021695mg PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.8e-22
Identity = 62/147 (42.18%), Postives = 96/147 (65.31%), Query Frame = 1


Query: 18  RAGVELIRNCDLPPPQKVFKSGMEE-------KLELLKALRLSQTRAREAERKAAKLMEE 77
           ++ + L++NCDLPPP K+F    E        +LE+LKAL LSQTRAREAERK   L++E
Sbjct: 32  KSALGLMQNCDLPPPVKLFSGPNETLLSKEKGELEILKALTLSQTRAREAERKLRTLIKE 91

Query: 78  RDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEE-----EEEEEEEERDKNG 137
           +D LSR   D++  +F YRQ V+LLEL ++  +++++++E++     +E +EEE  +K+G
Sbjct: 92  KDELSRMLVDDSLRLFAYRQWVRLLELELNLQRRQQQKKEDDVMNYADESKEEENYEKDG 151

Query: 138 -GSGGMKWVWALAICLSVVGVGFLFGY 152
             S   +W  A+ +CL+  G GF  GY
Sbjct: 152 IISTKNQWCTAIGLCLAFAGFGFALGY 178

[Close]

BLAST of ClCG10G008400 vs. TrEMBL
Match: A0A0J8EZE7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g138760 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.0e-20
Identity = 64/161 (39.75%), Postives = 90/161 (55.90%), Query Frame = 1


Query: 22  ELIRNCDLPPPQKVFKSGMEE-----------------------------KLELLKALRL 81
           +LI+NCDLPPP KV  SG+ +                             KL LLKALRL
Sbjct: 37  DLIQNCDLPPPTKVI-SGLSDNVTVISPMNRKKIHNFVGDHHHVKDDGNTKLGLLKALRL 96

Query: 82  SQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEE 141
           SQTRAREAE K   +++ERD L  AF  ++  IF YRQ V+LLE +VS+ ++++++++E 
Sbjct: 97  SQTRAREAEAKYQAIIKERDALGYAFVQDSMQIFAYRQFVRLLEFQVSQFEQQKQQQQEL 156

Query: 142 EE---EEEEEERDKNGGSGGMKWVWALAICLSVVGVGFLFG 151
            +    +  EE D   GS G+  +  +A CL + GVGF  G
Sbjct: 157 YDCGKRKHGEEGDDGSGSNGLTLLITMAFCLGIAGVGFAIG 196

[Close]

BLAST of ClCG10G008400 vs. TAIR10
Match: AT1G01240.1 (AT1G01240.1 unknown protein)

HSP 1 Score: 75.5 bits (184), Expect = 3.3e-14
Identity = 45/117 (38.46%), Postives = 69/117 (58.97%), Query Frame = 1


Query: 43  KLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKL 102
           K +LL+ALR SQTRAREAER A +   E+D +      +A  +  Y+Q +KLLE+    L
Sbjct: 210 KGQLLEALRHSQTRAREAERAAREACAEKDRVITILLKQASQMLAYKQWLKLLEMEALYL 269

Query: 103 QKEEEEEEEEE-------EEEEEEERDKNGGSGGMKWVWALAICLSVVGVGFLFGYT 153
           Q ++EEE+EE+       + ++  E+ K G +G  +++ A A+  S++G G L G+T
Sbjct: 270 QMKKEEEQEEQVKGMNLKKRKQRGEKKKKGETG--RYMMAFALGFSLIGAGLLLGWT 324

HSP 2 Score: 31.6 bits (70), Expect = 5.4e-01
Identity = 12/15 (80.00%), Postives = 12/15 (80.00%), Query Frame = 1


Query: 24  IRNCDLPPPQKVFKS 39
           I+NCDLPPPQK+ KS
Sbjct: 141 IQNCDLPPPQKLHKS 155

[Close]

BLAST of ClCG10G008400 vs. NCBI nr
Match: gi|778691835|ref|XP_011653361.1| (PREDICTED: uncharacterized protein LOC105435202 [Cucumis sativus])

HSP 1 Score: 263.8 bits (673), Expect = 1.8e-67
Identity = 134/158 (84.81%), Postives = 143/158 (90.51%), Query Frame = 1


Query: 1   MKAATSYNTKALDST--IHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAR 60
           MKA TS N KALDS   ++R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEEEEE 120
           EAERKAAKLMEERDC+SRAFEDEAR++FCYRQS+KLLELRV KLQK+EEEEEEEEEEE  
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVFKLQKQEEEEEEEEEEES- 120

Query: 121 EERDKNGGSGGMKWVWALAICLSVVGVGFLFGYTCNDS 157
              DKNGG+GGMKWVWALAICLSVVGVGFL GYTCN S
Sbjct: 121 ---DKNGGNGGMKWVWALAICLSVVGVGFLLGYTCNPS 154

[Close]

BLAST of ClCG10G008400 vs. NCBI nr
Match: gi|659111298|ref|XP_008455680.1| (PREDICTED: uncharacterized protein LOC103495794 [Cucumis melo])

HSP 1 Score: 261.5 bits (667), Expect = 9.1e-67
Identity = 134/158 (84.81%), Postives = 144/158 (91.14%), Query Frame = 1


Query: 1   MKAATSYNTKALDST--IHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAR 60
           MKAATS N ++LDS   + R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1   MKAATSNNRQSLDSRDMVQRDGVELIRNCDLPPPQKVFKSGMEEKIELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEEEEE 120
           EAERKAAKLMEERDC+SRAFEDEARL+FCYRQS+KLLELRV KLQK  +E EE EEEEEE
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLELRVCKLQK--QEVEEVEEEEEE 120

Query: 121 EERDKNGGSGGMKWVWALAICLSVVGVGFLFGYTCNDS 157
           EERD+NGG+GGMKWVWALAICLSVVGVGFL GYTCN S
Sbjct: 121 EERDENGGNGGMKWVWALAICLSVVGVGFLLGYTCNPS 156

[Close]

BLAST of ClCG10G008400 vs. NCBI nr
Match: gi|700198504|gb|KGN53662.1| (hypothetical protein Csa_4G097690 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 7.0e-51
Identity = 106/125 (84.80%), Postives = 116/125 (92.80%), Query Frame = 1


Query: 1   MKAATSYNTKALDST--IHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAR 60
           MKA TS N KALDS   ++R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEEEEE 120
           EAERKAAKLMEERDC+SRAFEDEAR++FCYRQS+KLLELRV KLQK+EEEEEEEEEEEEE
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVFKLQKQEEEEEEEEEEEEE 120

Query: 121 EERDK 124
           EE ++
Sbjct: 121 EEEEE 125

[Close]

BLAST of ClCG10G008400 vs. NCBI nr
Match: gi|700198504|gb|KGN53662.1| (hypothetical protein Csa_4G097690 [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 3.5e-26
Identity = 88/196 (44.90%), Postives = 103/196 (52.55%), Query Frame = 1


Query: 1   MKAATSYNTKALDST--IHRAGVELIRNCDLPP--------------------PQKVFKS 60
           MKA TS N KALDS   ++R GVELIRNCDLPP                      +    
Sbjct: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60

Query: 61  GMEEKLELLKALRLSQTRAREAE-------RKAAKLME-----------ERDCLSRAFED 120
             E K   L   R   +RA E E       R++ KL+E           E +      E+
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRVFKLQKQEEEEEEEEEEEEE 120

Query: 121 EARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEEEEEEERDKNGGSGGMKWVWALAICL 157
           E        +  +  E    + ++EEEEEEEEEEEEEEEE DKNGG+GGMKWVWALAICL
Sbjct: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEESDKNGGNGGMKWVWALAICL 180

HSP 2 Score: 130.2 bits (326), Expect = 3.2e-27
Identity = 81/184 (44.02%), Postives = 102/184 (55.43%), Query Frame = 1


Query: 19  AGVELIRNCDLPPPQK---------VFKS----------------------------GME 78
           +G++LI+NCDLPPP K         V  S                            G  
Sbjct: 42  SGLDLIQNCDLPPPMKFFTGSDNKTVLSSMNRACSMSMTQEDDNRDEFDMCGNRGDGGEN 101

Query: 79  EKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSK 138
           EKLELLKALRLSQTRAREAE+KA KL +E+DCLS A   EAR +F YRQ V+LLEL+VSK
Sbjct: 102 EKLELLKALRLSQTRAREAEKKAEKLGKEKDCLSDALLAEARELFAYRQWVRLLELKVSK 161

Query: 139 LQKEEEEEEEEE----------EEEEEEERDKNGGSGGMKWVWALAICLSVVGVGFLFG- 154
           L+ +  ++EEE           EE+  +E D+     G+ W+ ALA+C  + GVGF FG 
Sbjct: 162 LESQWAQQEEEGSFWGGRSKGLEEQSVKEGDEGENGDGISWIVALALCFGIAGVGFAFGC 221

[Close]

BLAST of ClCG10G008400 vs. NCBI nr
Match: gi|720054209|ref|XP_010272975.1| (PREDICTED: uncharacterized protein LOC104608632 isoform X2 [Nelumbo nucifera])

HSP 1 Score: 125.9 bits (315), Expect = 6.0e-26
Identity = 67/168 (39.88%), Postives = 99/168 (58.93%), Query Frame = 1


Query: 17  HRAGVELIRNCDLPPPQKVFKS------------------------GMEEKLELLKALRL 76
           H++ ++L++NCDLPPP KVF +                        G +EKL LLKAL L
Sbjct: 65  HKSCLDLVQNCDLPPPIKVFAAIDRTFASPKISREYREDSPTLPCAGQDEKLGLLKALHL 124

Query: 77  SQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEE 136
           SQTRAREAE KAA + +ERDCLS +  +E+  +F +RQ VKLLE+ VS+L+ ++++++++
Sbjct: 125 SQTRAREAEEKAALMAKERDCLSNSLLEESLQLFAHRQWVKLLEIEVSRLRSQKQQQQKQ 184

Query: 137 E---------EEEEEEERDKNGGSGGMKWVWALAICLSVVGVGFLFGY 152
                     E+   +E  + G  G + W  A A+CL + GVGF  GY
Sbjct: 185 SCSGCCQSDTEQGATKEEKEEGDVGSLTWYMAFALCLGIAGVGFALGY 232

The following BLAST results are available for this feature:

BLAST of ClCG10G008400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ57_CUCSA	4.9e-51	84.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097690 PE=4 SV=1	[more]
A0A0A0KZ57_CUCSA	2.4e-26	44.90	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G097690 PE=4 SV=1	[more]
B9H4Q1_POPTR	2.1e-22	41.71	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s07230g PE=4 SV=2	[more]
A0A022QWT4_ERYGU	4.8e-22	42.18	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a021695mg PE=4 SV=1	[more]
A0A0J8EZE7_BETVU	2.0e-20	39.75	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g138760 PE=4 S...	[more]

BLAST of ClCG10G008400 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G01240.1	3.3e-14	38.46	unknown protein	[more]

BLAST of ClCG10G008400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778691835\|ref\|XP_011653361.1\|	1.8e-67	84.81	PREDICTED: uncharacterized protein LOC105435202 [Cucumis sativus]	[more]
gi\|659111298\|ref\|XP_008455680.1\|	9.1e-67	84.81	PREDICTED: uncharacterized protein LOC103495794 [Cucumis melo]	[more]
gi\|700198504\|gb\|KGN53662.1\|	7.0e-51	84.80	hypothetical protein Csa_4G097690 [Cucumis sativus]	[more]
gi\|700198504\|gb\|KGN53662.1\|	3.5e-26	44.90	hypothetical protein Csa_4G097690 [Cucumis sativus]	[more]
gi\|720054209\|ref\|XP_010272975.1\|	6.0e-26	39.88	PREDICTED: uncharacterized protein LOC104608632 isoform X2 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G008400.1	ClCG10G008400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 92..124 score: -coord: 50..77 scor
None	No IPR available	PANTHER	PTHR33868	FAMILY NOT NAMED	coord: 41..150 score: 2.8
None	No IPR available	PANTHER	PTHR33868:SF3	SUBFAMILY NOT NAMED	coord: 41..150 score: 2.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG10G008400	Csa4G097690	Cucumber (Chinese Long) v2	cuwcgB276
ClCG10G008400	MELO3C018999	Melon (DHL92) v3.5.1	mewcgB456
ClCG10G008400	Cla003096	Watermelon (97103) v1	wcgwmB075
ClCG10G008400	Cla97C10G191860	Watermelon (97103) v2	wcgwmbB038
ClCG10G008400	Bhi11G000715	Wax gourd	wcgwgoB098
ClCG10G008400	CSPI04G08820	Wild cucumber (PI 183967)	cpiwcgB285
ClCG10G008400	CmoCh04G009010	Cucurbita moschata (Rifu)	cmowcgB616
ClCG10G008400	Lsi05G008160	Bottle gourd (USVL1VR-Ls)	lsiwcgB318
ClCG10G008400	Cp4.1LG01g09100	Cucurbita pepo (Zucchini)	cpewcgB349
ClCG10G008400	CsGy4G008640	Cucumber (Gy14) v2	cgybwcgB255
ClCG10G008400	MELO3C018999.2	Melon (DHL92) v3.6.1	medwcgB449
ClCG10G008400	Carg14242	Silver-seed gourd	carwcgB0914
ClCG10G008400	CsaV3_4G009020	Cucumber (Chinese Long) v3	cucwcgB284

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG10G008400	Cucurbita maxima (Rimu)	cmawcgB283
ClCG10G008400	Cucurbita maxima (Rimu)	cmawcgB614
ClCG10G008400	Cucurbita moschata (Rifu)	cmowcgB278
ClCG10G008400	Wild cucumber (PI 183967)	cpiwcgB199
ClCG10G008400	Cucurbita pepo (Zucchini)	cpewcgB195
ClCG10G008400	Cucumber (Gy14) v2	cgybwcgB182
ClCG10G008400	Silver-seed gourd	carwcgB0991