Cla97C10G191860 (gene) Watermelon (97103) v2

Overview
NameCla97C10G191860
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionTransmembrane protein, putative
LocationCla97Chr10 : 16739416 .. 16739886 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCGGCGACGAGCTACAATACTAAAGCCCTAGATTCGACGATCCACAGAGCCGGGGTTGAGCTAATTCGGAATTGCGATCTGCCGCCGCCGCAGAAGGTATTCAAGAGTGGGATGGAGGAGAAATTGGAACTATTGAAGGCTCTAAGACTGTCGCAAACGAGGGCGAGAGAAGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAGAGGGATTGTCTTAGTAGGGCTTTTGAAGATGAAGCCAGATTGATTTTCTGTTATCGACAGTCGGTCAAATTGCTGGAGCTTAGGGTTTCGAAGTTGCAGAAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGGATAAAAATGGTGGTAGTGGAGGAATGAAATGGGTTTGGGCTTTGGCCATTTGTTTGAGTGTTGTTGGAGTCGGCTTTCTTTTCGGCTATACATGTAATGATTCATGA

mRNA sequence

ATGAAGGCGGCGACGAGCTACAATACTAAAGCCCTAGATTCGACGATCCACAGAGCCGGGGTTGAGCTAATTCGGAATTGCGATCTGCCGCCGCCGCAGAAGGTATTCAAGAGTGGGATGGAGGAGAAATTGGAACTATTGAAGGCTCTAAGACTGTCGCAAACGAGGGCGAGAGAAGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAGAGGGATTGTCTTAGTAGGGCTTTTGAAGATGAAGCCAGATTGATTTTCTGTTATCGACAGTCGGTCAAATTGCTGGAGCTTAGGGTTTCGAAGTTGCAGAAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGGATAAAAATGGTGGTAGTGGAGGAATGAAATGGGTTTGGGCTTTGGCCATTTGTTTGAGTGTTGTTGGAGTCGGCTTTCTTTTCGGCTATACATGTAATGATTCATGA

Coding sequence (CDS)

ATGAAGGCGGCGACGAGCTACAATACTAAAGCCCTAGATTCGACGATCCACAGAGCCGGGGTTGAGCTAATTCGGAATTGCGATCTGCCGCCGCCGCAGAAGGTATTCAAGAGTGGGATGGAGGAGAAATTGGAACTATTGAAGGCTCTAAGACTGTCGCAAACGAGGGCGAGAGAAGCGGAGAGAAAGGCGGCGAAATTGATGGAGGAGAGGGATTGTCTTAGTAGGGCTTTTGAAGATGAAGCCAGATTGATTTTCTGTTATCGACAGTCGGTCAAATTGCTGGAGCTTAGGGTTTCGAAGTTGCAGAAAGAAGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGGGATAAAAATGGTGGTAGTGGAGGAATGAAATGGGTTTGGGCTTTGGCCATTTGTTTGAGTGTTGTTGGAGTCGGCTTTCTTTTCGGCTATACATGTAATGATTCATGA

Protein sequence

MKAATSYNTKALDSTIHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKLQKEEEEEEEEEEEEEEEERDKNGGSGGMKWVWALAICLSVVGVGFLFGYTCNDS
Homology
[Close]
BLAST of Cla97C10G191860 vs. NCBI nr
Match: KGN53662.1 (hypothetical protein Csa_4G097690 [Cucumis sativus])

HSP 1 Score: 166.4 bits (420), Expect = 7.8e-38
Identity = 87/101 (86.14%), Postives = 94/101 (93.07%), Query Frame = 0 

Query: 1   MKAATSYNTKALDS--TIHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAR 60
           MKA TS N KALDS   ++R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRV 100
           EAERKAAKLMEERDC+SRAFEDEAR++FCYRQS+KLLELRV
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRV 101

[Close]
BLAST of Cla97C10G191860 vs. NCBI nr
Match: XP_011653361.1 (PREDICTED: uncharacterized protein LOC105435202 [Cucumis sativus])

HSP 1 Score: 166.4 bits (420), Expect = 7.8e-38
Identity = 87/101 (86.14%), Postives = 94/101 (93.07%), Query Frame = 0 

Query: 1   MKAATSYNTKALDS--TIHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAR 60
           MKA TS N KALDS   ++R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRV 100
           EAERKAAKLMEERDC+SRAFEDEAR++FCYRQS+KLLELRV
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRV 101

[Close]
BLAST of Cla97C10G191860 vs. NCBI nr
Match: XP_008455680.1 (PREDICTED: uncharacterized protein LOC103495794 [Cucumis melo])

HSP 1 Score: 159.1 bits (401), Expect = 1.2e-35
Identity = 84/98 (85.71%), Postives = 91/98 (92.86%), Query Frame = 0 

Query: 1  MKAATSYNTKALDS--TIHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAR 60
          MKAATS N ++LDS   + R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1  MKAATSNNRQSLDSRDMVQRDGVELIRNCDLPPPQKVFKSGMEEKIELLKALRLSQTRAR 60

Query: 61 EAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLE 97
          EAERKAAKLMEERDC+SRAFEDEARL+FCYRQS+KLLE
Sbjct: 61 EAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLE 98

[Close]
BLAST of Cla97C10G191860 vs. NCBI nr
Match: XP_022970087.1 (uncharacterized protein LOC111469054 [Cucurbita maxima])

HSP 1 Score: 139.8 bits (351), Expect = 7.8e-30
Identity = 80/118 (67.80%), Postives = 89/118 (75.42%), Query Frame = 0 

Query: 8   NTKALDST------IHRAGVELIRNCDLPPPQKVFKS-------------------GMEE 67
           N +ALDST       ++ GV+LIRNCDLPPPQK+F +                   GMEE
Sbjct: 61  NPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGAMAARGRGREEVEAGGMEE 120

Query: 68  KLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVS 101
           KLELLKALRLSQTRAREAERKAAKLMEERDC+SRAFEDEARLIFCYRQS+KL+ELRVS
Sbjct: 121 KLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRVS 178

[Close]
BLAST of Cla97C10G191860 vs. NCBI nr
Match: XP_023545135.1 (uncharacterized protein LOC111804522 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.8 bits (351), Expect = 7.8e-30
Identity = 80/118 (67.80%), Postives = 89/118 (75.42%), Query Frame = 0 

Query: 8   NTKALDST------IHRAGVELIRNCDLPPPQKVFKS-------------------GMEE 67
           N +ALDST       ++ GV+LIRNCDLPPPQK+F +                   GMEE
Sbjct: 19  NPEALDSTDMLLEFPYKPGVDLIRNCDLPPPQKLFTASDKGAMAARGRGREEVETGGMEE 78

Query: 68  KLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVS 101
           KLELLKALRLSQTRAREAERKAAKLMEERDC+SRAFEDEARLIFCYRQS+KL+ELRVS
Sbjct: 79  KLELLKALRLSQTRAREAERKAAKLMEERDCISRAFEDEARLIFCYRQSLKLMELRVS 136

[Close]
BLAST of Cla97C10G191860 vs. TrEMBL
Match: tr|A0A0A0KZ57|A0A0A0KZ57_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G097690 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.1e-38
Identity = 87/101 (86.14%), Postives = 94/101 (93.07%), Query Frame = 0 

Query: 1   MKAATSYNTKALDS--TIHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAR 60
           MKA TS N KALDS   ++R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1   MKAGTSNNQKALDSRDMVNRGGVELIRNCDLPPPQKVFKSGMEEKMELLKALRLSQTRAR 60

Query: 61  EAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRV 100
           EAERKAAKLMEERDC+SRAFEDEAR++FCYRQS+KLLELRV
Sbjct: 61  EAERKAAKLMEERDCISRAFEDEARMVFCYRQSLKLLELRV 101

[Close]
BLAST of Cla97C10G191860 vs. TrEMBL
Match: tr|A0A1S3C2P7|A0A1S3C2P7_CUCME (uncharacterized protein LOC103495794 OS=Cucumis melo OX=3656 GN=LOC103495794 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.2e-36
Identity = 84/98 (85.71%), Postives = 91/98 (92.86%), Query Frame = 0 

Query: 1  MKAATSYNTKALDS--TIHRAGVELIRNCDLPPPQKVFKSGMEEKLELLKALRLSQTRAR 60
          MKAATS N ++LDS   + R GVELIRNCDLPPPQKVFKSGMEEK+ELLKALRLSQTRAR
Sbjct: 1  MKAATSNNRQSLDSRDMVQRDGVELIRNCDLPPPQKVFKSGMEEKIELLKALRLSQTRAR 60

Query: 61 EAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLE 97
          EAERKAAKLMEERDC+SRAFEDEARL+FCYRQS+KLLE
Sbjct: 61 EAERKAAKLMEERDCISRAFEDEARLMFCYRQSLKLLE 98

[Close]
BLAST of Cla97C10G191860 vs. TrEMBL
Match: tr|A0A251NST4|A0A251NST4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G193900 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.2e-16
Identity = 60/121 (49.59%), Postives = 70/121 (57.85%), Query Frame = 0 

Query: 19  AGVELIRNCDLPPPQKVF-------------------------------------KSGME 78
           +G++LI+NCDLPPP KVF                                       G  
Sbjct: 35  SGLDLIQNCDLPPPMKVFTGSDNKTVLSSMNRACSMSMTQEDDNRDEFDMCGNRGDGGEN 94

Query: 79  EKLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSK 103
           EKLELLKALRLSQTRAREAE+KA KL +E+DCLS A   EAR +F YRQ V+LLEL+VSK
Sbjct: 95  EKLELLKALRLSQTRAREAEKKAEKLGKEKDCLSDALLAEARELFAYRQWVRLLELKVSK 154

[Close]
BLAST of Cla97C10G191860 vs. TrEMBL
Match: tr|A0A2I4GV61|A0A2I4GV61_9ROSI (uncharacterized protein LOC109011152 OS=Juglans regia OX=51240 GN=LOC109011152 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.1e-15
Identity = 58/117 (49.57%), Postives = 72/117 (61.54%), Query Frame = 0 

Query: 18  RAGVELIRNCDLPPPQKVF-------------------------------KSGME-EKLE 77
           ++G++L++NCDLPPP KVF                               +SG+E EKLE
Sbjct: 31  KSGMDLMQNCDLPPPVKVFTRSDKTVISSMNSMLSMAGKEVENEEFNVYRRSGVENEKLE 90

Query: 78  LLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSKL 103
           LLKALRLSQTRAREAE+KAA L++ERD LS    +E   +F YRQ V+LLEL VSKL
Sbjct: 91  LLKALRLSQTRAREAEKKAAALVKERDYLSNTLVEEGTRLFAYRQWVRLLELHVSKL 147

[Close]
BLAST of Cla97C10G191860 vs. TrEMBL
Match: tr|A0A2P6RQ59|A0A2P6RQ59_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0112271 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.1e-15
Identity = 57/121 (47.11%), Postives = 70/121 (57.85%), Query Frame = 0 

Query: 19  AGVELIRNCDLPPPQKVFKSGMEE------------------------------------ 78
           AG++LI+NCDLPPP KVF    ++                                    
Sbjct: 34  AGLDLIQNCDLPPPMKVFTGSADKTVVSSMNRICSMMAREDHENSHELIDMYRGDGDQNY 93

Query: 79  -KLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVKLLELRVSK 103
            KLELLKALRLSQTRAREAE+KA KL +E++CLS A   EA+ +F YRQ V+LLEL+VSK
Sbjct: 94  GKLELLKALRLSQTRAREAEKKAEKLAKEKECLSNALLAEAKELFAYRQWVRLLELKVSK 153

[Close]
BLAST of Cla97C10G191860 vs. TAIR10
Match: AT2G46550.1 (unknown protein)

HSP 1 Score: 45.8 bits (107), Expect = 2.8e-05
Identity = 42/140 (30.00%), Postives = 63/140 (45.00%), Query Frame = 0 

Query: 2   KAATSYNTKALD---STIHRAGVELIRNCDLPPPQKVFKS-----------GMEE----- 61
           KAA  + T   D   S + +  ++ + NCDLP PQK+ +S           G+ +     
Sbjct: 178 KAAPWWRTTDKDELASLVAQRSLDYVENCDLPTPQKMKRSYYGSPRGFDSDGLRDYSVSG 237

Query: 62  -------------------------KLELLKALRLSQTRAREAERKAAKLMEERDCLSRA 98
                                    K ELL+ALR SQTRAREAE  A +   E++ L + 
Sbjct: 238 QTIKGTSKGSSCKNRPEASSESDLSKSELLEALRRSQTRAREAENMAKEAYAEKEHLVKI 297

[Close]
BLAST of Cla97C10G191860 vs. TAIR10
Match: AT1G01240.1 (unknown protein)

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 40/124 (32.26%), Postives = 52/124 (41.94%), Query Frame = 0 

Query: 24  IRNCDLPPPQKVFKS----------------------------------GMEE------- 83
           I+NCDLPPPQK+ KS                                  G  E       
Sbjct: 141 IQNCDLPPPQKLHKSIHSSSGEKGFKTAVKSPWKQGVWKDRFERSLSYNGSTESKNTSPM 200

Query: 84  ---------KLELLKALRLSQTRAREAERKAAKLMEERDCLSRAFEDEARLIFCYRQSVK 98
                    K +LL+ALR SQTRAREAER A +   E+D +      +A  +  Y+Q +K
Sbjct: 201 SSPRSDDLSKGQLLEALRHSQTRAREAERAAREACAEKDRVITILLKQASQMLAYKQWLK 260

The following BLAST results are available for this feature:
BLAST of Cla97C10G191860 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53662.17.8e-3886.14hypothetical protein Csa_4G097690 [Cucumis sativus][more]
XP_011653361.17.8e-3886.14PREDICTED: uncharacterized protein LOC105435202 [Cucumis sativus][more]
XP_008455680.11.2e-3585.71PREDICTED: uncharacterized protein LOC103495794 [Cucumis melo][more]
XP_022970087.17.8e-3067.80uncharacterized protein LOC111469054 [Cucurbita maxima][more]
XP_023545135.17.8e-3067.80uncharacterized protein LOC111804522 [Cucurbita pepo subsp. pepo][more]
BLAST of Cla97C10G191860 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KZ57|A0A0A0KZ57_CUCSA5.1e-3886.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G097690 PE=4 SV=1[more]
tr|A0A1S3C2P7|A0A1S3C2P7_CUCME8.2e-3685.71uncharacterized protein LOC103495794 OS=Cucumis melo OX=3656 GN=LOC103495794 PE=... [more]
tr|A0A251NST4|A0A251NST4_PRUPE3.2e-1649.59Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G193900 PE=4 SV=1[more]
tr|A0A2I4GV61|A0A2I4GV61_9ROSI2.1e-1549.57uncharacterized protein LOC109011152 OS=Juglans regia OX=51240 GN=LOC109011152 P... [more]
tr|A0A2P6RQ59|A0A2P6RQ59_ROSCH2.1e-1547.11Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0112271 PE=4... [more]
BLAST of Cla97C10G191860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C10G191860 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G46550.12.8e-0530.00unknown protein[more]
AT1G01240.11.1e-0432.26unknown protein[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C10G191860.1Cla97C10G191860.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 50..77
NoneNo IPR availableCOILSCoilCoilcoord: 92..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..121
NoneNo IPR availablePANTHERPTHR33868:SF3SUBFAMILY NOT NAMEDcoord: 15..37
coord: 41..152
NoneNo IPR availablePANTHERPTHR33868FAMILY NOT NAMEDcoord: 15..37
coord: 41..152

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C10G191860Cla003096Watermelon (97103) v1wmwmbB311
Cla97C10G191860Csa4G097690Cucumber (Chinese Long) v2cuwmbB276
Cla97C10G191860MELO3C018999Melon (DHL92) v3.5.1mewmbB466
Cla97C10G191860ClCG10G008400Watermelon (Charleston Gray)wcgwmbB038
Cla97C10G191860CSPI04G08820Wild cucumber (PI 183967)cpiwmbB283
Cla97C10G191860CmoCh04G009010Cucurbita moschata (Rifu)cmowmbB689
Cla97C10G191860Lsi05G008160Bottle gourd (USVL1VR-Ls)lsiwmbB322
Cla97C10G191860CsGy4G008640Cucumber (Gy14) v2cgybwmbB263
Cla97C10G191860MELO3C018999.2Melon (DHL92) v3.6.1medwmbB459
Cla97C10G191860Carg14242Silver-seed gourdcarwmbB0988
Cla97C10G191860CsaV3_4G009020Cucumber (Chinese Long) v3cucwmbB278
Cla97C10G191860Bhi11G000715Wax gourdwgowmbB020
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C10G191860Silver-seed gourdcarwmbB1076
Cla97C10G191860Cucurbita maxima (Rimu)cmawmbB336
Cla97C10G191860Cucurbita maxima (Rimu)cmawmbB718
Cla97C10G191860Cucurbita moschata (Rifu)cmowmbB322