CsGy4G007090 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G007090
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	60S ribosomal protein L27
Location	Chr4 : 5186941 .. 5193900 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGAGGATGGACGAAAACGGTGTAAGCTATTGATTAAAAGATACAGTGCCGTCGGCCCAGTTGATTAACAAAAGCCCATTTAAATTATGGCCCAAATTGACTTGAAAAGCCCTAAAACCCTATTTTTAGGGAAAACCTAAATCAACGTTTCAACTGTTGGAGGCTTGGAGGCTTGGAGGCAGAGAGCAAGGAGACGGAAAACACAGACCAGAGGTGGAAGTTCGGAAATGGTGAAGTTCCTCAAGCCTAACAAAGCCGTCATCGTCCTCCAAGGCCGTTACGCCGGCCGGAAGGCGGTCATCATTCGCGCCTTCGACGATGGAACTCGGGATCGCGCTTATGGCCACTGCTTAGTCGCTGGAATCAAGAAGTACCCGGCCAAGGTTATCCGCAAGGACTCCGCCAAGAAGACCGCTAAAAAATCCCGTGTCAAGGCCTTCATTAAGCTCGTTAATTATAGGCATCTGATGCCCACTAGGTACACTCTCGATGTCGATCTTAAAGATGTTGTCACTGTCGATTCGTTGCAGTCAAAGGACAAAAAGGTCACCGCCGCCAAAGAGACCAAGAAGAGGTTCGAGGAAAGGTTCAAAACCGGGAAGAACAGGTGGTTTTTCACTAAGCTCAGATTCTGAAGTAGCTCATTCAGTTACTGGTTTCTTCTGGATTACTCTCGTATTAGGTTATTGAGCAATTTGATTTTTTGTTTTCGAGTTATCGTACGTTCTATCTTACTAATGTAGTTTGTTTTGGTGTTTAATTTTTGTCTGGACGTACTTTGAATGCTTGGATGAGAAATCTCTATGGTTATAATGATACATTTGAGACTTGCATTTATATAGATTCATATATTTTTCTGATATTATGTGATGGTTTTGGTATTCATATATTTTTCTTCTTCGTTTTAAAGTGAAAACCGCTTTACGAGATGTAGATTATGCAATGCAACTTATGTATCTGTATACTTTTAAATATTTGATGTCTGAGTATTTGCTTATGATTGAGTGGAGTTCCTTTAAACGTTTCCATCCCTTTTGTTTACCGGCCGGCTGTCTTGTTTTGAAGTCTTCGATCTTTTTTCGTTTCAACCAGAATGCTCTTGAAACGTCTTGAAATTCCAAGCATTCCCTTCTTCCTTTACAAATTTGTTACGATCTTAATGAGTTTTTAGATATACTGCTTGAATTACCTTTCCTTCTGAGATGGCTTCTGGGTTTTTATATATATATATATATATATATTTTTTTTTAATCGATGAATTAAGCCTTCAATCTCTGGTATATTTGTCCGTAGTTCCGGATTTTACATTGAATATTAATGATTTATATCTGAAAAAAATAGGTATTGAAATTTATATCCCTATGATGATTGATTGGAATTATAAAAGTAGTGGACTGAGTCTTACTGGTGAGAAGTATCAATTCTGAGGGATATTTTTTTTGCAAATAGATTTCCTGAAGCTGTCATTGTGAGGTTTCAAATTTTGGTCAGGATTTCTTTTAAAAAATAATATATATGACCATGATGGATGTTGAGCAGAGGTTGTGTTCTTGTTTTGGGCAAGGGTACGGAGCATTTGAGTCTCTAATCCCTGTTTGTCGACCTTGAGTTTGGATGAAACTCACATTTTTTTTCTTTTTTTTCTTTTTTTTTGTGAAAAATTCATTTATGGTTTGTGGTTTAGGGTTTGATTTTTATTTTAGGTTTGAAAGATGTTAGCTCCCATTGGGATTTTCGCGAGTTTGTTAAACTAAATATGATATACTCCTGAAAAATAATTTAGGATTTCTTTTTGTATTTTAACTATGTTATAATTGATGTCTAATTACACACAATTTCAATTTATTTTTTTATTTTAACTATGCTATAGTTGAAGTCTAATTACATGTTGATGAACAAATATCGATATTGGTTATGTACCCTTATTTGATGGATCACATCTACCTGTCCCTGATCTCTGAATAACACATAGTAGAAAGATGAAAAATTTGTTCTACTGTTTTCAGATCTAATGCATGATGAAAAATTTGTTCTACTATTTGGATACCATGTTACTTCAACTGGTAACTTTGCTCTGTGTAAGTTTCAATATCATCTATGCTTTGCTTGCGCTCATCTTCTCAAACATTTTGTCTTTGTTAATCAGAGATTAGACTGATTAGTTGCTGTATCCGTCTGCTATTTCAATAGTTTCTATTGCATTGGTTAATCAATTTATTGTGAATTTTCTATTGCATTTTATTTCCCTGTCTCGGAATATTCTACCAATGCATTGAATGCATGCCATGTTTAGGTCTTGGTGATGGCCTAGAGGGGAATACGATACCTTAATTAAATCTATGGAGCAATTTAGTCACGTTTATTTAAACTTACAACTCAAAAGTAATTTATTGTTGTTTTGGTGGAATCTGAGTTCAGTTCGAGTTGGTTTAGGACCGGTTGGTCCTGTGCTCTGTCTGGGTTTGAAAATCTTCAAAGTTAGATGAAATAAACATTATATTTTGTTGTGTGTGGTCTATTTCGTTTTTGTAGTTGATTATATTATTTTGGTATATGGTTTTATGAATGCCTGATGTTAATTTGAAATTCTAAAAACGTTCATATAATCTTACAGTTAAATTATACGTAAAAGACTATATCTCATGCATTGAGAGATTTTCATTTTCTTGTAGGGTCAGGGATAACTCTCTCAATCATTCATTTTTCATACACTTTCCCTTCTCGTCAATAGTAACCGTCTCTTCTCCCATGCTTCTGCCTCCTATGTTTAGTGTTTCCATTTCCACTCAGTATTTGTCTCCGACCACTTCACCTTTCATCGTTGGTCATAAGAATGTACAATTAGATTTGGCTTCCTCTTTCCTCCATTTTTTTCATGCTCGTTTTTTTGATTCCTTCATCTTCAAGTCATTTTTCCATTTCTCTTTTTCTCTAACTTTGATTTTTGCTAGTTTCTTCCCCTCTCTTTCTTTATCACTTTGCAGCCCTTTAGAAAGCTTTTGATGCATTGATATAGCATGCCTATGTATTCTTCTCTTTGCAATCTACAATCCATTTCTGCATCTACTCCCATATTCATAGAGTCTCTCCTCTTTCAACCACAGCGCATTTAGGTGTTTACTCCCAAGTCCCTTTCTCAATCGTGCCCGTGCTTTCTTCCATCCTTCCTTTACTTTTCAACACAAATTTCTTCGACATACTAGTTTCTTTTCGTAGATGATGAACACTATTTTCTCGTAATTCCTCTGCCATCCTTTCAACTTTCTTCGACATACTAGATTCTTTTCGTAGATGATGAACACTATTTTCTCGTAATTCCTCTGCCATCCTTTCAACTCTTTTGGACAACTCTAAATATTTAAGCTCCCTAATGTCTTCATTCTTTTCCAACCTCTCCTCTGTTTTGTTTCTACACATAACCTGTGTCATCCACAAAATGTTACAGCTCTGATACTAATTTGTTAGGATCTCACCTAACCAGAATTATCTCAATAAAATAAGATGAACTCAATAACTCTTAACAGAACATTCAAATATGAAATATATACTAGAAGATCATAAGAACAAGTAATCCTAGCCTTTTGAGAGGGCTGGACTTTCTCAAGGTTCCCTTACAAGGAAATATTTCTTCAAAATTCTTCACACCTCTTTTCAACCCCTCTCCCATACTATATATAACAAAAAGATGTAACCAACTTACTAACTATTTACTAATATGTTTGTTAACTACTATTTTTATTTTCTACATTTTCTACCAGTAATCCACTATTTTCCTATCTAGGGTCTTTACAAAATCCCTCTTCTTGAAAGCGACCGACGGAGAAAGAACTCCTTAAATATATCACTAAAAGATGTGTGACCCGCTAACAGAAAACCACATCCAAAATTTTTTCAAAGCAAACACATGTAAGCACAACTCGAAGGATAAAGAAAAGAGTTAAAACTTTTTCATTTCCGTTGTCTGGGAATTAAGTTTTATAATGCAATAATTAAAGTAACATAGCATAGCAGTGAACTGAAACCTACCTCTTCCCTAACAAACAATTAAAGGGATATCTTCATCCATCCCCACTTCTTCCAAGACATTTTGACAAAAAAAACCTCATATCGTGAAGCATCAAAAAGCGAATTGGGTGCATGAACAAAATAAGATTATTGATTAATCATTCTCAAAATAAAGAAGAGGAAAAAAGAGGTCATCAGCTGAAGACCATCTAATTGACCCCAATCACAAATTTCCACCTCGTTGCATATCTCAAAACAACCTAGTGAGATACTTAGGTTAAATAGAAAACAGAGACCTCAACAAGAATGGAACATAAGAACAAGAGGACCAAAACCCAGTAGCTGAGTAACTTGATCCAATAAAAGAAAGAAAATAAAAAGCAAACTAGATAACAGCTATGAGAAGGTAAAGGCTAAAGCACACTATTCCAAAGATATTAAGAGCTAATATCAATAATACCGTTCAAGTCATCACACAAAGGGGGTTTGTGGAGAATGCCTTCCAATTCCAACAAATCAGAACAAAACATGAATGCAAAACTTTTAACTACAAAAAAAATGGACAGCAAATCATCAAATGATGTAGGTAAGTAAGTCTCTGGGAGCCTTCTTTCATAGCAAAATTTAACCCCTTAGCAAAAAATTAGATCAAACGGATCATACCACAACAGGAATCACCAACTTAATAGCAAGAAAGCAACGTATACCATTTAAAGATGTTGTAGATAAGATTTGAACTCAAAATTTTGAAATTTTGAAAGGAATACACGTACTATTATGAAGTAGAATTCAATAGTAATAAAATATTATTTAATATATTATAATATAATATTTCAAAATTAATATTAAAATACAAAACTCGGTCTTCCTGGTCTCGAACAGTTGCATAACAATTAAAAACAAAATAAGCATATTTTTTTTTTTTGCTAATACTTCGGCCTAATTTCAAGTATGGCCCAGTGCAGTAGGAAGGCCCATTTTAATTGGGGCCCAATCTCAGTTGAAAATGCCCTAAAACCCAATATGTTGAGATAACCTAAATCTACGCCCCCTCTCTTGTTGAAGAAGAGCCGTCATAGAAGGGGAAGTACAGAGTGGAGGAGAAATCCGAAAATGGTGAAATTCCTCAAGCCCAACAAAGCCGTCATCGTCCTCCAAGGCCGTTACGCCGGTCGGAAGGCGGTCATCGTTCGCGCCTTTGACGACGGTACCCGGGATCGTGCTTATGGCCACTGTTTAGTCGCTGGAATCAAGAAGTACCCGGCCAAGGTCATCCGCAAGGACTCCGCCAAGAAAACCGCCAAAAAATCTCGAGTCAAGGCCTTTGTCAAGCTCGTCAACTACAGGCACCTGATGCCCACAAGGTACACTCTCGATGTCGATCTTAAAGACGTTGTCACTATTGATTCATTGCAGTCAAAAGACAAGAAGGTGACTGCCGCCAAGGAGACTAAGAAGAGGTTCGAGGAAAGGTTCAAAACCGGGAAGAACAGGTGGTTTTTCACCAAGCTCAGGTTTTGAAGTGGCTGCTTCAATTATGGGTTTGTTCTGCATTACTCTCTTGTTAGGTTAACTGAACAACCTTATTTTTTGTTTTTGAGCTATCGTACGTTTTACATTACGAGTTTAGTTTGATTTGGTGTTATGGATTGTGTGCAAATTACATTTCCATCAGTTGAATTTATATTTAATACTTAATGTCTGAAGCCCGTGGATAGTTGCAAATATTCTTCTGGCTATTTTTGTTGTAGTTTGATAAGAGTTACTTTTACGCATATAAGAACTTAAATGAACAAATTTGATGTTTTAATGATTTTCATTAGGGGTTTATTAGCTGATTTTCTATGTCTGATGACATTATTACTACATGTTTGCAACCAAATTTTGTACAAGTTCATATCACTCTTAGTGATAAAGAAGATGTTTGTAAGTGCTAGAAAACTGTTTATAAACACATGGAAAGTTAATCCAAAAGTTTTGAACTATTATCTTTAGCATGTTGATGAACAAATATCGAAATTGGTTATGTGCCTTTATTTGATGGATCTCATATACCTGTCCTTGATCTTTTGTTATCCATTTTGTTATGTCACAATCTCTCTGAATAACACACATATAGGAGAAAGTTGAAAATGTTATTCGAATGTTTTCAAATCAAATCCATGTTGAAACTGAGCACCTTGAGAACGGTCTCTTGTGATCCTTAAAATATATTATCAAACGGTCGATTCTTTTCCCTTATATTACACTTTCAAAATGGACTTTAATTTGCATGATGCCAAGTATTTGCTTTCAACTTCTATTTTGGGATACCATGTTACTTCAACTGGTAACTTACCGTGTAAGTTTCAATCTATTATCTATGCTTTGCTTGCGTTCATCTTCTCAAACATTTTGTCTTTGTTAATCAGAGAATAGACTGATTAGTTGCTAGTATACGTCTGCTATTTCATTAGTTTCCATTGCATTGGTTAATCCATGTATTGTGAATTTTCTATTGCATTTCATTTCGTTGTCTTGGTATATTCTACTAATGCATTGAATGCATGTTTAGGTCTTGGTAGATGGCCTAGAGGGGAATATGATAGCTTAATTATATCTTTAGGGCAATTTAGTTTAGTTTATTTAAACTTACAACTCAAAAGTAATTTATAGTTGCTTTGGTCAAATTTGTTTGGTTCAGTTCAAGTTGGTTTAGGACCGGTTGGTCCATCGCTCTGTCTGGATTTCAAAATCTTGAAAGTTAGATCAAATAAACATTATATTTTGTTATGTGTGATCCATTTCATTTTTTTAGTTGATTATATTGTTGTGGTGCATGATTTTATGAATGATTAATGTTAATCTGAAATTCTAAAAATGTTCATAAAATCTTGTTTTTTCTTTTGGTTTTATAGAGGCCATGAGGGAGGCCTCTTTGTTCTTCAAGAATTTTGGATTTTGTTAGTTCACTAA

mRNA sequence

CGGAGGATGGACGAAAACGGTGTAAGCTATTGATTAAAAGATACAGTGCCGTCGGCCCAGTTGATTAACAAAAGCCCATTTAAATTATGGCCCAAATTGACTTGAAAAGCCCTAAAACCCTATTTTTAGGGAAAACCTAAATCAACGTTTCAACTGTTGGAGGCTTGGAGGCTTGGAGGCAGAGAGCAAGGAGACGGAAAACACAGACCAGAGGTGGAAGTTCGGAAATGGTGAAGTTCCTCAAGCCTAACAAAGCCGTCATCGTCCTCCAAGGCCGTTACGCCGGCCGGAAGGCGGTCATCATTCGCGCCTTCGACGATGGAACTCGGGATCGCGCTTATGGCCACTGCTTAGTCGCTGGAATCAAGAAGTACCCGGCCAAGGTTATCCGCAAGGACTCCGCCAAGAAGACCGCTAAAAAATCCCGTGTCAAGGCCTTCATTAAGCTCGTTAATTATAGGCATCTGATGCCCACTAGGTACACTCTCGATGTCGATCTTAAAGATGTTGTCACTGTCGATTCGTTGCAGTCAAAGGACAAAAAGGTCACCGCCGCCAAAGAGACCAAGAAGAGGTTCGAGGAAAGGTTCAAAACCGGGAAGAACAGAGGCCATGAGGGAGGCCTCTTTGTTCTTCAAGAATTTTGGATTTTGTTAGTTCACTAA

Coding sequence (CDS)

ATGGTGAAGTTCCTCAAGCCTAACAAAGCCGTCATCGTCCTCCAAGGCCGTTACGCCGGCCGGAAGGCGGTCATCATTCGCGCCTTCGACGATGGAACTCGGGATCGCGCTTATGGCCACTGCTTAGTCGCTGGAATCAAGAAGTACCCGGCCAAGGTTATCCGCAAGGACTCCGCCAAGAAGACCGCTAAAAAATCCCGTGTCAAGGCCTTCATTAAGCTCGTTAATTATAGGCATCTGATGCCCACTAGGTACACTCTCGATGTCGATCTTAAAGATGTTGTCACTGTCGATTCGTTGCAGTCAAAGGACAAAAAGGTCACCGCCGCCAAAGAGACCAAGAAGAGGTTCGAGGAAAGGTTCAAAACCGGGAAGAACAGAGGCCATGAGGGAGGCCTCTTTGTTCTTCAAGAATTTTGGATTTTGTTAGTTCACTAA

Protein sequence

MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAKKTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEERFKTGKNRGHEGGLFVLQEFWILLVH

Homology

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BLAST of CsGy4G007090 vs. NCBI nr
Match: XP_004147740.1 (PREDICTED: 60S ribosomal protein L27-like [Cucumis sativus] >KGN53500.1 hypothetical protein Csa_4G062360 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 9.4e-62
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

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BLAST of CsGy4G007090 vs. NCBI nr
Match: XP_004147739.1 (PREDICTED: 60S ribosomal protein L27 [Cucumis sativus] >KGN53499.1 hypothetical protein Csa_4G061860 [Cucumis sativus])

HSP 1 Score: 244.6 bits (623), Expect = 2.1e-61
Identity = 124/127 (97.64%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVT+DSLQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

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BLAST of CsGy4G007090 vs. NCBI nr
Match: XP_008451849.1 (PREDICTED: 60S ribosomal protein L27-like [Cucumis melo])

HSP 1 Score: 243.8 bits (621), Expect = 3.6e-61
Identity = 125/127 (98.43%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVT+DSLQSKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

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BLAST of CsGy4G007090 vs. NCBI nr
Match: XP_008451854.1 (PREDICTED: 60S ribosomal protein L27 [Cucumis melo] >XP_008451855.1 PREDICTED: 60S ribosomal protein L27 [Cucumis melo])

HSP 1 Score: 243.0 bits (619), Expect = 6.1e-61
Identity = 123/127 (96.85%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVT+DSLQSKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

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BLAST of CsGy4G007090 vs. NCBI nr
Match: XP_022942298.1 (60S ribosomal protein L27-2-like [Cucurbita moschata] >XP_022931548.1 60S ribosomal protein L27-2-like [Cucurbita moschata] >XP_022983312.1 60S ribosomal protein L27-2-like [Cucurbita maxima] >XP_022985030.1 60S ribosomal protein L27-2-like [Cucurbita maxima] >XP_023521538.1 60S ribosomal protein L27-2-like [Cucurbita pepo subsp. pepo] >XP_023548326.1 60S ribosomal protein L27-2-like [Cucurbita pepo subsp. pepo] >XP_023551847.1 60S ribosomal protein L27-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.1 bits (614), Expect = 2.3e-60
Identity = 124/127 (97.64%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLK NKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDS+K
Sbjct: 1   MVKFLKQNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSSK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVT+DSLQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

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BLAST of CsGy4G007090 vs. TAIR10
Match: AT3G22230.1 (Ribosomal L27e protein family)

HSP 1 Score: 212.2 bits (539), Expect = 2.1e-55
Identity = 106/127 (83.46%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLK NKAVI+LQGRYAG+KAVII++FDDGT DR YGHCLVAG+KKYP+KVIRKDSAK
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L+SKDKKVTA KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

[Close]

BLAST of CsGy4G007090 vs. TAIR10
Match: AT4G15000.1 (Ribosomal L27e protein family)

HSP 1 Score: 212.2 bits (539), Expect = 2.1e-55
Identity = 106/127 (83.46%), Postives = 117/127 (92.13%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLK NKAVI+LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYP+KVIRKDSAK
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+LQSKDKKV A KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

[Close]

BLAST of CsGy4G007090 vs. TAIR10
Match: AT2G32220.1 (Ribosomal L27e protein family)

HSP 1 Score: 198.7 bits (504), Expect = 2.4e-51
Identity = 95/127 (74.80%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVK +KP KAVI+LQGRY G+KAVI+++FDDGT ++ YGHCLVAG+KKYP+KVIRKDSAK
Sbjct: 1   MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F K++NY+H+MPTRYTLD+DLK+VV+ D++ SKDKKVTA KE K +FEER
Sbjct: 61  KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

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BLAST of CsGy4G007090 vs. Swiss-Prot
Match: sp|Q05462|RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.4e-55
Identity = 107/127 (84.25%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVI+LQGRYAG+KAVI++ FDDGTR++ YGHCLVAGIKK+P+KVI+KDSAK
Sbjct: 1   MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAF+KLVNY+HLMPTRYTLDVDLKD V  D LQSKDKKVTA KETKK  EER
Sbjct: 61  KTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

[Close]

BLAST of CsGy4G007090 vs. Swiss-Prot
Match: sp|Q8LCL3|RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 3.8e-54
Identity = 106/127 (83.46%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLK NKAVI+LQGRYAG+KAVII++FDDGT DR YGHCLVAG+KKYP+KVIRKDSAK
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+L+SKDKKVTA KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

[Close]

BLAST of CsGy4G007090 vs. Swiss-Prot
Match: sp|P51419|RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 3.8e-54
Identity = 106/127 (83.46%), Postives = 117/127 (92.13%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLK NKAVI+LQGRYAG+KAVII++FDDG RDR YGHCLVAG+KKYP+KVIRKDSAK
Sbjct: 1   MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK FIKLVNY+HLMPTRYTLDVDLK+V T+D+LQSKDKKV A KE K + EER
Sbjct: 61  KTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

[Close]

BLAST of CsGy4G007090 vs. Swiss-Prot
Match: sp|Q9SKX8|RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.3e-50
Identity = 95/127 (74.80%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVK +KP KAVI+LQGRY G+KAVI+++FDDGT ++ YGHCLVAG+KKYP+KVIRKDSAK
Sbjct: 1   MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F K++NY+H+MPTRYTLD+DLK+VV+ D++ SKDKKVTA KE K +FEER
Sbjct: 61  KTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

[Close]

BLAST of CsGy4G007090 vs. Swiss-Prot
Match: sp|P41101|RL27_SOLTU (60S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.8e-48
Identity = 102/131 (77.86%), Postives = 111/131 (84.73%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           M KFLKPNKAVI+LQG+YAGRKAVI+RAFD+GTRDR YGHCLVAGI +YP KVIRKDSAK
Sbjct: 1   MEKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDL----KDVVTVDSLQSKDKKVTAAKETKKR 120
           K  KKSRVKAFIKLVNY H+MPTRYTLD DL    KDVV  D LQ++DKKVT A+ TK R
Sbjct: 61  KAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVT-ARRTKAR 120

Query: 121 FEERFKTGKNR 128
             ERFKTGKNR
Sbjct: 121 LAERFKTGKNR 130

[Close]

BLAST of CsGy4G007090 vs. TrEMBL
Match: tr|A0A0A0KVB4|A0A0A0KVB4_CUCSA (60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G062360 PE=3 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 6.2e-62
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

[Close]

BLAST of CsGy4G007090 vs. TrEMBL
Match: tr|A0A0A0KXF9|A0A0A0KXF9_CUCSA (60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G061860 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.4e-61
Identity = 124/127 (97.64%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVT+DSLQSKDKKVTAAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

[Close]

BLAST of CsGy4G007090 vs. TrEMBL
Match: tr|A0A1S3BT89|A0A1S3BT89_CUCME (60S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103493014 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.4e-61
Identity = 125/127 (98.43%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVT+DSLQSKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

[Close]

BLAST of CsGy4G007090 vs. TrEMBL
Match: tr|A0A1S3BSF6|A0A1S3BSF6_CUCME (60S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103493018 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 4.0e-61
Identity = 123/127 (96.85%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVI+RAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVKAF+KLVNYRHLMPTRYTLDVDLKDVVT+DSLQSKDKKV+AAKETKKRFEER
Sbjct: 61  KTAKKSRVKAFVKLVNYRHLMPTRYTLDVDLKDVVTIDSLQSKDKKVSAAKETKKRFEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

[Close]

BLAST of CsGy4G007090 vs. TrEMBL
Match: tr|A0A2I0K189|A0A2I0K189_PUNGR (60S ribosomal protein L27 OS=Punica granatum OX=22663 GN=CRG98_017263 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.1e-58
Identity = 117/127 (92.13%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 1   MVKFLKPNKAVIVLQGRYAGRKAVIIRAFDDGTRDRAYGHCLVAGIKKYPAKVIRKDSAK 60
           MVKFLKPNKAVIVLQGRYAGRKAVI+R+FDDGTRDRAYGHCLVAGIKKYP+KVIRKDSAK
Sbjct: 1   MVKFLKPNKAVIVLQGRYAGRKAVIVRSFDDGTRDRAYGHCLVAGIKKYPSKVIRKDSAK 60

Query: 61  KTAKKSRVKAFIKLVNYRHLMPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEER 120
           KTAKKSRVK F+KLVNYRHLMPTRYTLDVDLKD+VT D LQSKDK+VTA+KETKKRFEER
Sbjct: 61  KTAKKSRVKCFVKLVNYRHLMPTRYTLDVDLKDIVTADCLQSKDKRVTASKETKKRFEER 120

Query: 121 FKTGKNR 128
           FKTGKNR
Sbjct: 121 FKTGKNR 127

The following BLAST results are available for this feature:

BLAST of CsGy4G007090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147740.1	9.4e-62	100.00	PREDICTED: 60S ribosomal protein L27-like [Cucumis sativus] >KGN53500.1 hypothet...	[more]
XP_004147739.1	2.1e-61	97.64	PREDICTED: 60S ribosomal protein L27 [Cucumis sativus] >KGN53499.1 hypothetical ...	[more]
XP_008451849.1	3.6e-61	98.43	PREDICTED: 60S ribosomal protein L27-like [Cucumis melo]	[more]
XP_008451854.1	6.1e-61	96.85	PREDICTED: 60S ribosomal protein L27 [Cucumis melo] >XP_008451855.1 PREDICTED: 6...	[more]
XP_022942298.1	2.3e-60	97.64	60S ribosomal protein L27-2-like [Cucurbita moschata] >XP_022931548.1 60S riboso...	[more]

BLAST of CsGy4G007090 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22230.1	2.1e-55	83.46	Ribosomal L27e protein family	[more]
AT4G15000.1	2.1e-55	83.46	Ribosomal L27e protein family	[more]
AT2G32220.1	2.4e-51	74.80	Ribosomal L27e protein family	[more]

BLAST of CsGy4G007090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q05462\|RL27_PEA	4.4e-55	84.25	60S ribosomal protein L27 OS=Pisum sativum OX=3888 GN=RPL27 PE=2 SV=1	[more]
sp\|Q8LCL3\|RL272_ARATH	3.8e-54	83.46	60S ribosomal protein L27-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27B PE=2 SV=2	[more]
sp\|P51419\|RL273_ARATH	3.8e-54	83.46	60S ribosomal protein L27-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27C PE=2 SV=2	[more]
sp\|Q9SKX8\|RL271_ARATH	4.3e-50	74.80	60S ribosomal protein L27-1 OS=Arabidopsis thaliana OX=3702 GN=RPL27A PE=2 SV=1	[more]
sp\|P41101\|RL27_SOLTU	1.8e-48	77.86	60S ribosomal protein L27 OS=Solanum tuberosum OX=4113 GN=RPL27 PE=2 SV=1	[more]

BLAST of CsGy4G007090 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KVB4\|A0A0A0KVB4_CUCSA	6.2e-62	100.00	60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G062360 PE=3 SV=1	[more]
tr\|A0A0A0KXF9\|A0A0A0KXF9_CUCSA	1.4e-61	97.64	60S ribosomal protein L27 OS=Cucumis sativus OX=3659 GN=Csa_4G061860 PE=3 SV=1	[more]
tr\|A0A1S3BT89\|A0A1S3BT89_CUCME	2.4e-61	98.43	60S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103493014 PE=3 SV=1	[more]
tr\|A0A1S3BSF6\|A0A1S3BSF6_CUCME	4.0e-61	96.85	60S ribosomal protein L27 OS=Cucumis melo OX=3656 GN=LOC103493018 PE=3 SV=1	[more]
tr\|A0A2I0K189\|A0A2I0K189_PUNGR	1.1e-58	92.13	60S ribosomal protein L27 OS=Punica granatum OX=22663 GN=CRG98_017263 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome
GO:0005622	intracellular

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR008991	Translation_prot_SH3-like_sf
IPR038655	L27e_sf
IPR001141	Ribosomal_L27e

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G007090.1	CsGy4G007090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..120
None	No IPR available	PANTHER	PTHR10497:SF4	60S RIBOSOMAL PROTEIN L27-1-RELATED	coord: 1..127
None	No IPR available	CDD	cd06090	KOW_RPL27	coord: 6..88 e-value: 2.38567E-41 score: 133.848
IPR001141	Ribosomal protein L27e	PFAM	PF01777	Ribosomal_L27e	coord: 52..127 e-value: 1.8E-25 score: 89.0
IPR001141	Ribosomal protein L27e	PANTHER	PTHR10497	60S RIBOSOMAL PROTEIN L27	coord: 1..127
IPR001141	Ribosomal protein L27e	PRODOM	PD009396		coord: 60..127 e-value: 1.0E-10 score: 156.0
IPR038655	Ribosomal protein L27e superfamily	GENE3D	G3DSA:2.30.30.770		coord: 1..138 e-value: 3.7E-51 score: 174.8
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	SSF50104	Translation proteins SH3-like domain	coord: 2..112

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G007090	Cla005436	Watermelon (97103) v1	cgybwmB289
CsGy4G007090	Csa4G061860	Cucumber (Chinese Long) v2	cgybcuB165
CsGy4G007090	MELO3C016198	Melon (DHL92) v3.5.1	cgybmeB271
CsGy4G007090	ClCG07G010880	Watermelon (Charleston Gray)	cgybwcgB302
CsGy4G007090	CSPI04G07180	Wild cucumber (PI 183967)	cgybcpiB168
CsGy4G007090	CmaCh16G004850	Cucurbita maxima (Rimu)	cgybcmaB498
CsGy4G007090	CmaCh04G006160	Cucurbita maxima (Rimu)	cgybcmaB541
CsGy4G007090	CmoCh04G006620	Cucurbita moschata (Rifu)	cgybcmoB515
CsGy4G007090	CmoCh16G005260	Cucurbita moschata (Rifu)	cgybcmoB467
CsGy4G007090	Lsi07G008010	Bottle gourd (USVL1VR-Ls)	cgyblsiB278
CsGy4G007090	CsaV3_4G007410	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G007090	CsaV3_4G032310	Cucumber (Chinese Long) v3	cgybcucB175
CsGy4G007090	Cla97C07G137620	Watermelon (97103) v2	cgybwmbB304
CsGy4G007090	Bhi01G002384	Wax gourd	cgybwgoB352

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsGy4G007090	CsGy4G020470	Cucumber (Gy14) v2	cgybcgybB121

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G007090	Cucurbita pepo (Zucchini)	cgybcpeB487
CsGy4G007090	Cucurbita pepo (Zucchini)	cgybcpeB501
CsGy4G007090	Melon (DHL92) v3.6.1	cgybmedB268
CsGy4G007090	Silver-seed gourd	carcgybB0047
CsGy4G007090	Silver-seed gourd	carcgybB0652