CsGy3G018270 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G018270
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 14443498 .. 14445437 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCAATGACACAATGAAATAAAAAATAAATGGGTTTAGGAGGAAAAATGTGTCATTCTTATTAAACAGGCATGTTTTTTTTAAAGAAGATAGAAACTCCTTCACGAAAAAACACCAACCCTTTTCCTCAGTAAGCCTCTTCACCTTCTCCATGATTTCGATTACCACCTCCTTCAACCCTGATGCAAGCACCAGTCGTCGCCTTTGTCACCCCTCTCCCCTTCTGTCTGACATTTTCTTCTCTTCTTCGTCAACTGCATCTCACGAATCCCAAATTTAGTGTTGTCGTCCAGCTTCAGTCGCCACCAAACAGGTTTGGGGTTTTTGGCTTGATTGGGCTCCTGTTCCAATTGTTTGAGCATTGTGCAACGATTTCGGCAACTTCTAAAGTAACTCAATTCAACTAATAATTTCAAGCTATGTGCTTTGTTTCATGTTTCATCCTTCTTGTGTTTGATTTGGCATTGTGAAGCTGTAATGGTTATGTTTGTGAGTTTCCTTGTAAGATTCATTCATATTAGAGTTATAGTTATAAATCCTAAACCCTAAAAGTGGTACTCCATATTTGTGTGGAAGAAAGTAATGTACAATACTATGAACTGTATTGAAGGAATAAGAACATGCATGATGTTTTAGTTTAGGGTTCAACATGTGCATCCATAATATTATTGTGTTGCCCATTTGTATTGAACTATCACGTGTAAATGAAAGAACTTTGTTCATTTGATTATGATATATTAAGTTCAAAAACGCATGAATCTATTGGTTCACAATAATTGATTATTGTAAAAGGTAGTTATGTCTTGTTAGATTTTATTGTAGTTTGGTGAATTGAGTTTGAGGTGGCGTTTTGTTTATCTCCAAAGGTAAGTTCAGTCATCCATCTCTCAAGTCGTTCTTTCTCTCTCTTGTTTTTCTCATTGATTTTGTTTGTTTAATTTTTGATATCTATCCTTATTCCTCACTGTTGAATTTATTACATTACACAGAAGCTTGCTCCATCAATACAACCTTTATTAGTATGCTCAAAACTTGTTTGAGGAAATGTCGCATCTCAACAAAGTCTTAGCTTAAAATGAGTCTCAAAACTACAATTTTTCTTACATTACTACTTTAGATTCAATTTTTTACTGGTAAATTTTCAACTCATTTGCTATTAAAATGTGTTTATCCATGTGTTGTTGGTGGTTAATTTACATGTTTATGGCCGTTTTATGAGTTTCATGAGATTTTGTGTAAATTGAAAGAGTAAGGATTTCAACATCACTAAATTTCAATATAATTTGAAGATGTCAAAATATATGCTAAGCTATAAAAAAAAATGGTAGTCCAATGAGGGTCTCTAATGTCATTCTCCATCTTTGTCCAATTTTTGAACTTGACTTACTTTAATTGTAAAACGACAAGCAAACAAGAGGGTATCTTCTAACTACTTATGTGGATGATTTCTTTAATATTATAAAGTAAACTTATTGTTTTTTATGTGTTTGGTTGTACTTATAATATATTTATTTTTGAAATTATTGCTAATGATTAGGTTTAGAAATTGGTATAGATTAAGAATTGTGTTTGAAGGTTGTCATCCAGTTTGAGGTTGCACGAAGAACGAGGAAAAAGGAGAGAAGAAAAAAGCTTCACTTCTCCATGCGCCTGCCTCGAGGAGGCAATTGAAGAGGCAAAGAAGAGAAATGGGCGATAACTAAAGTAGGGGTCGAATGCCAGCGTCGAGAGTTCTACCAAGTCCCTCCCACCACAACACAAAGAGTTGCATCTTGGTGGCGAAGAGAGGTTGGTACATTGCTACACGATGAGACAAGTAAATCTGACATAAAGATGAAAAAGAGGTACCAAGCTATAGGATCATGTTTTAAGTCGTGTTATAAGAAAAAAGTTTAAATTATGTAGAACATTGTAAAAGTGTTAAGTTAATAAAAAAAACA

mRNA sequence

TTTCAATGACACAATGAAATAAAAAATAAATGGGTTTAGGAGGAAAAATGTGTCATTCTTATTAAACAGGCATGTTTTTTTTAAAGAAGATAGAAACTCCTTCACGAAAAAACACCAACCCTTTTCCTCAGTAAGCCTCTTCACCTTCTCCATGATTTCGATTACCACCTCCTTCAACCCTGATGCAAGCACCAGTCGTCGCCTTTGTCACCCCTCTCCCCTTCTGTCTGACATTTTCTTCTCTTCTTCGTCAACTGCATCTCACGAATCCCAAATTTAGTGTTGTCGTCCAGCTTCAGTCGCCACCAAACAGGTTTGGGGTTTTTGGCTTGATTGGGCTCCTGTTCCAATTGTTTGAGCATTGTGCAACGATTTCGGCAACTTCTAAAGTTGTCATCCAGTTTGAGGTTGCACGAAGAACGAGGAAAAAGGAGAGAAGAAAAAAGCTTCACTTCTCCATGCGCCTGCCTCGAGGAGGCAATTGAAGAGGCAAAGAAGAGAAATGGGCGATAACTAAAGTAGGGGTCGAATGCCAGCGTCGAGAGTTCTACCAAGTCCCTCCCACCACAACACAAAGAGTTGCATCTTGGTGGCGAAGAGAGGTTGGTACATTGCTACACGATGAGACAAGTAAATCTGACATAAAGATGAAAAAGAGGTACCAAGCTATAGGATCATGTTTTAAGTCGTGTTATAAGAAAAAAGTTTAAATTATGTAGAACATTGTAAAAGTGTTAAGTTAATAAAAAAAACA

Coding sequence (CDS)

ATGCAAGCACCAGTCGTCGCCTTTGTCACCCCTCTCCCCTTCTGTCTGACATTTTCTTCTCTTCTTCGTCAACTGCATCTCACGAATCCCAAATTTAGTGTTGTCGTCCAGCTTCAGTCGCCACCAAACAGGTTTGGGGTTTTTGGCTTGATTGGGCTCCTGTTCCAATTGTTTGAGCATTGTGCAACGATTTCGGCAACTTCTAAAGTTGTCATCCAGTTTGAGGTTGCACGAAGAACGAGGAAAAAGGAGAGAAGAAAAAAGCTTCACTTCTCCATGCGCCTGCCTCGAGGAGGCAATTGA

Protein sequence

MQAPVVAFVTPLPFCLTFSSLLRQLHLTNPKFSVVVQLQSPPNRFGVFGLIGLLFQLFEHCATISATSKVVIQFEVARRTRKKERRKKLHFSMRLPRGGN
Homology
[Close]
BLAST of CsGy3G018270 vs. NCBI nr
Match: KGN57526.1 (hypothetical protein Csa_3G205290 [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 3.4e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MQAPVVAFVTPLPFCLTFSSLLRQLHLTNPKFSVVVQLQSPPNRFGVFGLIGLLFQLFEH 60
           MQAPVVAFVTPLPFCLTFSSLLRQLHLTNPKFSVVVQLQSPPNRFGVFGLIGLLFQLFEH
Sbjct: 1   MQAPVVAFVTPLPFCLTFSSLLRQLHLTNPKFSVVVQLQSPPNRFGVFGLIGLLFQLFEH 60

Query: 61  CATISATSKVVIQFEVARRTRKKERRKKLHFSMRLPRGGN 101
           CATISATSKVVIQFEVARRTRKKERRKKLHFSMRLPRGGN
Sbjct: 61  CATISATSKVVIQFEVARRTRKKERRKKLHFSMRLPRGGN 100

[Close]
BLAST of CsGy3G018270 vs. TrEMBL
Match: tr|A0A0A0LBY3|A0A0A0LBY3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G205290 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.3e-47
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MQAPVVAFVTPLPFCLTFSSLLRQLHLTNPKFSVVVQLQSPPNRFGVFGLIGLLFQLFEH 60
           MQAPVVAFVTPLPFCLTFSSLLRQLHLTNPKFSVVVQLQSPPNRFGVFGLIGLLFQLFEH
Sbjct: 1   MQAPVVAFVTPLPFCLTFSSLLRQLHLTNPKFSVVVQLQSPPNRFGVFGLIGLLFQLFEH 60

Query: 61  CATISATSKVVIQFEVARRTRKKERRKKLHFSMRLPRGGN 101
           CATISATSKVVIQFEVARRTRKKERRKKLHFSMRLPRGGN
Sbjct: 61  CATISATSKVVIQFEVARRTRKKERRKKLHFSMRLPRGGN 100

The following BLAST results are available for this feature:
BLAST of CsGy3G018270 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57526.13.4e-47100.00hypothetical protein Csa_3G205290 [Cucumis sativus][more]
BLAST of CsGy3G018270 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G018270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G018270 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LBY3|A0A0A0LBY3_CUCSA2.3e-47100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G205290 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G018270.1CsGy3G018270.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G018270Csa3G205290Cucumber (Chinese Long) v2cgybcuB109
CsGy3G018270CSPI03G18400Wild cucumber (PI 183967)cgybcpiB110
CsGy3G018270CsaV3_3G018480Cucumber (Chinese Long) v3cgybcucB117
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G018270Melon (DHL92) v3.6.1cgybmedB160
CsGy3G018270Melon (DHL92) v3.6.1cgybmedB215
CsGy3G018270Watermelon (Charleston Gray)cgybwcgB197
CsGy3G018270Watermelon (Charleston Gray)cgybwcgB214
CsGy3G018270Watermelon (97103) v1cgybwmB229
CsGy3G018270Watermelon (97103) v1cgybwmB253
CsGy3G018270Wild cucumber (PI 183967)cgybcpiB153
CsGy3G018270Silver-seed gourdcarcgybB0221
CsGy3G018270Silver-seed gourdcarcgybB0380
CsGy3G018270Silver-seed gourdcarcgybB0650
CsGy3G018270Cucumber (Chinese Long) v3cgybcucB156
CsGy3G018270Watermelon (97103) v2cgybwmbB190
CsGy3G018270Watermelon (97103) v2cgybwmbB206
CsGy3G018270Wax gourdcgybwgoB271
CsGy3G018270Wax gourdcgybwgoB298
CsGy3G018270Cucumber (Gy14) v2cgybcgybB115
CsGy3G018270Cucurbita maxima (Rimu)cgybcmaB295
CsGy3G018270Cucurbita maxima (Rimu)cgybcmaB332
CsGy3G018270Cucurbita maxima (Rimu)cgybcmaB379
CsGy3G018270Cucurbita maxima (Rimu)cgybcmaB410
CsGy3G018270Cucurbita moschata (Rifu)cgybcmoB270
CsGy3G018270Cucurbita moschata (Rifu)cgybcmoB301
CsGy3G018270Cucurbita moschata (Rifu)cgybcmoB352
CsGy3G018270Cucurbita moschata (Rifu)cgybcmoB386
CsGy3G018270Cucurbita pepo (Zucchini)cgybcpeB317
CsGy3G018270Cucurbita pepo (Zucchini)cgybcpeB336
CsGy3G018270Cucurbita pepo (Zucchini)cgybcpeB362
CsGy3G018270Cucumber (Chinese Long) v2cgybcuB151
CsGy3G018270Bottle gourd (USVL1VR-Ls)cgyblsiB173
CsGy3G018270Bottle gourd (USVL1VR-Ls)cgyblsiB198
CsGy3G018270Melon (DHL92) v3.5.1cgybmeB160
CsGy3G018270Melon (DHL92) v3.5.1cgybmeB210