CsGy2G002440 (gene) Cucumber (Gy14) v2

NameCsGy2G002440
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionhypothetical protein
LocationChr2 : 1618074 .. 1618565 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGATTCCAACGAACACAAAGGAAACTCCTCACCGTCCAGTCTGAAAGAGATGCTCAAATCTTCTCTATGTTTATCTTGTTGCCTTCGTAAGCACCGGAATGGCCATCATCATCTTCATCACCACCATCATCATCACCACCGGCGGATGATGTCTATTTCGTCCGACGGTGAATCGTCGCCTGGACCGCTCATGAGATGTTCTTCTGCAAAGGATAAGTCCAGATCTCGTGAGTGTCATGATATTAAAGATCGACTTCCGAGTTTCATTTCCCGACTCGGTCGCCATGGACGTCGTCACTCTGCTTCCGCTGATTTCCATTACGATGCACTTAGTTATTCGCTTAATTTCGATGAAGGATATGATGAAGGTCATGTTGATGATGATTTTCCTCTCAGGAATTTCTCCTCTAGGTTACCGGCTTCTCCTCCGAAATCCTCACCGTCTACGACTACTGCATCGAGGGAGATGATCACGGCGTTTAGTTAA

mRNA sequence

ATGGACGATTCCAACGAACACAAAGGAAACTCCTCACCGTCCAGTCTGAAAGAGATGCTCAAATCTTCTCTATGTTTATCTTGTTGCCTTCGTAAGCACCGGAATGGCCATCATCATCTTCATCACCACCATCATCATCACCACCGGCGGATGATGTCTATTTCGTCCGACGGTGAATCGTCGCCTGGACCGCTCATGAGATGTTCTTCTGCAAAGGATAAGTCCAGATCTCGTGAGTGTCATGATATTAAAGATCGACTTCCGAGTTTCATTTCCCGACTCGGTCGCCATGGACGTCGTCACTCTGCTTCCGCTGATTTCCATTACGATGCACTTAGTTATTCGCTTAATTTCGATGAAGGATATGATGAAGGTCATGTTGATGATGATTTTCCTCTCAGGAATTTCTCCTCTAGGTTACCGGCTTCTCCTCCGAAATCCTCACCGTCTACGACTACTGCATCGAGGGAGATGATCACGGCGTTTAGTTAA

Coding sequence (CDS)

ATGGACGATTCCAACGAACACAAAGGAAACTCCTCACCGTCCAGTCTGAAAGAGATGCTCAAATCTTCTCTATGTTTATCTTGTTGCCTTCGTAAGCACCGGAATGGCCATCATCATCTTCATCACCACCATCATCATCACCACCGGCGGATGATGTCTATTTCGTCCGACGGTGAATCGTCGCCTGGACCGCTCATGAGATGTTCTTCTGCAAAGGATAAGTCCAGATCTCGTGAGTGTCATGATATTAAAGATCGACTTCCGAGTTTCATTTCCCGACTCGGTCGCCATGGACGTCGTCACTCTGCTTCCGCTGATTTCCATTACGATGCACTTAGTTATTCGCTTAATTTCGATGAAGGATATGATGAAGGTCATGTTGATGATGATTTTCCTCTCAGGAATTTCTCCTCTAGGTTACCGGCTTCTCCTCCGAAATCCTCACCGTCTACGACTACTGCATCGAGGGAGATGATCACGGCGTTTAGTTAA

Protein sequence

MDDSNEHKGNSSPSSLKEMLKSSLCLSCCLRKHRNGHHHLHHHHHHHHRRMMSISSDGESSPGPLMRCSSAKDKSRSRECHDIKDRLPSFISRLGRHGRRHSASADFHYDALSYSLNFDEGYDEGHVDDDFPLRNFSSRLPASPPKSSPSTTTASREMITAFS
BLAST of CsGy2G002440 vs. NCBI nr
Match: XP_011650096.1 (PREDICTED: NEDD8-specific protease 1 [Cucumis sativus] >KGN60746.1 hypothetical protein Csa_2G009350 [Cucumis sativus])

HSP 1 Score: 244.2 bits (622), Expect = 3.1e-61
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0

Query: 1   MDDSNEHKGNSSPSSLKEMLKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGES 60
           MDDSNEHKGNSSPSSLKEMLKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGES
Sbjct: 1   MDDSNEHKGNSSPSSLKEMLKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGES 60

Query: 61  SPGPLMRCSSAKDKSRSRECHDIKDRLPSFISRLGRHGRRHSASADFHYDALSYSLNFDE 120
           SPGPLMRCSSAKDKSRSRECHDIKDRLPSFISRLGRHGRRHSASADFHYDALSYSLNFDE
Sbjct: 61  SPGPLMRCSSAKDKSRSRECHDIKDRLPSFISRLGRHGRRHSASADFHYDALSYSLNFDE 120

Query: 121 GYDEGHVDDDFPLRNFSSRLPASPPKSSPSTTTASREMITAFS 164
           GYDEGHVDDDFPLRNFSSRLPASPPKSSPSTTTASREMITAFS
Sbjct: 121 GYDEGHVDDDFPLRNFSSRLPASPPKSSPSTTTASREMITAFS 163

BLAST of CsGy2G002440 vs. NCBI nr
Match: XP_008460859.1 (PREDICTED: uncharacterized protein LOC103499607 [Cucumis melo])

HSP 1 Score: 187.2 bits (474), Expect = 4.5e-44
Identity = 95/107 (88.79%), Postives = 100/107 (93.46%), Query Frame = 0

Query: 57  DGESSPGPLMRCSSAKDKSRSRECHDIKDRLPSFISRLGRHGRRHSASADFHYDALSYSL 116
           DG+ SPGPL RCSSAKDKSRSRECHDIKDRLP+FISRLGRHGRRHSASADF YDALSYSL
Sbjct: 60  DGD-SPGPLTRCSSAKDKSRSRECHDIKDRLPNFISRLGRHGRRHSASADFRYDALSYSL 119

Query: 117 NFDEGYDEGHVDDDFPLRNFSSRLPASPPKSSPSTTTASREMITAFS 164
           NFDEG    HVDD+FPLRNFSSRLPASPPKSSPS++TASREMITAFS
Sbjct: 120 NFDEGXXXXHVDDEFPLRNFSSRLPASPPKSSPSSSTASREMITAFS 165

BLAST of CsGy2G002440 vs. NCBI nr
Match: XP_022938304.1 (uncharacterized protein LOC111444439 [Cucurbita moschata])

HSP 1 Score: 133.7 bits (335), Expect = 5.8e-28
Identity = 107/165 (64.85%), Postives = 114/165 (69.09%), Query Frame = 0

Query: 1   MDDSNEHKGNSSPSSLKEMLKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGES 60
           MDDSNEHK N+SPSSLK  +KS              XXXXXXXXXXXXXXXXXXXX    
Sbjct: 1   MDDSNEHKENASPSSLKAKIKS----SLCLSCCLRRXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  SPGPLMRCSSAKDKSRSRECHDIK-DRLPSFISRLGRHGRRH-SASADFHYDALSYSLNF 120
                 RCSSAKD SRSRE  + K D  P FISRLGRH RRH SAS DFHYDALSY+L  
Sbjct: 61  XXXXXXRCSSAKDXSRSRESPESKTDWRPHFISRLGRHSRRHSSASVDFHYDALSYALXX 120

Query: 121 DEGYDEGHVDDDFPLRNFSSRLPASPPKSSPSTTTASREMITAFS 164
                  HVDD FPLRNFSSRLPASPPKS+PS+T  SREM TA+S
Sbjct: 121 XXXXXXXHVDDAFPLRNFSSRLPASPPKSAPSSTETSREMTTAYS 161

BLAST of CsGy2G002440 vs. NCBI nr
Match: XP_022965990.1 (uncharacterized protein LOC111465710 [Cucurbita maxima])

HSP 1 Score: 128.3 bits (321), Expect = 2.5e-26
Identity = 105/164 (64.02%), Postives = 112/164 (68.29%), Query Frame = 0

Query: 1   MDDSNEHKGNSSPSSLKEMLKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGES 60
           MDDSNEHK N+SPSSLK  +KS          XXXXXXXXXXXXXXXXXXXXXXXX    
Sbjct: 1   MDDSNEHKENASPSSLKAKIKSSLCLSCCLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  SPGPLMRCSSAKDKSRSRECHDIKDRLPSFISRLGRHGRRH-SASADFHYDALSYSLNFD 120
                                D +   P FISRLG H RRH SAS DFHYDALSY+LNFD
Sbjct: 61  XXXXXXXXXXXXXXXSPESKTDWR---PHFISRLGLHSRRHSSASVDFHYDALSYALNFD 120

Query: 121 EGYDEGHVDDDFPLRNFSSRLPASPPKSSPSTTTASREMITAFS 164
           EGYDEGHVDD FPLRNFSSRLPASPPKS PS++  SREM TA+S
Sbjct: 121 EGYDEGHVDDAFPLRNFSSRLPASPPKSEPSSSETSREMTTAYS 161

BLAST of CsGy2G002440 vs. NCBI nr
Match: XP_023536962.1 (uncharacterized protein LOC111798189 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 123.2 bits (308), Expect = 7.9e-25
Identity = 103/165 (62.42%), Postives = 110/165 (66.67%), Query Frame = 0

Query: 1   MDDSNEHKGNSSPSSLKEMLKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGES 60
           MDDSNEHK N+SPSSLK  +KS              XXXXXXXXXXXXXXXXXXXX    
Sbjct: 1   MDDSNEHKENASPSSLKAKIKS----SLCLSCCLRRXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  SPGPLMRCSSAKDKSRSRECHDIK-DRLPSFISRLGRHGRRH-SASADFHYDALSYSLNF 120
                 RCSSAKDKSRSRE  + K D  P FISRLGRH RRH SAS DFHYDALSY+   
Sbjct: 61  XXXXXXRCSSAKDKSRSRESPESKADWRPHFISRLGRHSRRHSSASVDFHYDALSYAXXX 120

Query: 121 DEGYDEGHVDDDFPLRNFSSRLPASPPKSSPSTTTASREMITAFS 164
                   VDD FPLRNFSSRLPASPPKS+   +  SREM TA+S
Sbjct: 121 XXXXXXXXVDDAFPLRNFSSRLPASPPKSAXXXSETSREMTTAYS 161

BLAST of CsGy2G002440 vs. TAIR10
Match: AT5G35090.1 (unknown protein)

HSP 1 Score: 59.7 bits (143), Expect = 1.9e-09
Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 0

Query: 99  RRHSASADFHYDALSYSLNFDEGYDEGHVDDDFPLRNFSSRLPASPPKSSPSTTTA 155
           RRH  +ADFHYD  SY+LNFD+G ++ ++ D FPLRNFS+RLP SPP S+ +  ++
Sbjct: 99  RRH--TADFHYDPSSYALNFDKGDEDDNI-DRFPLRNFSARLPHSPPSSAKAADSS 151

BLAST of CsGy2G002440 vs. TAIR10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1))

HSP 1 Score: 50.1 bits (118), Expect = 1.5e-06
Identity = 28/56 (50.00%), Postives = 33/56 (58.93%), Query Frame = 0

Query: 100 RHSASADFHYDALSYSLNFDEGYDEGHVDDDFPLRNFSSRLPASPPKSSPSTTTAS 156
           R S    F YD LSYSLNFD+G   GH DD+FP R++S R  A    S P +T  S
Sbjct: 118 RSSDQGKFRYDQLSYSLNFDDGNQTGHFDDEFPYRDYSMRFAA---PSLPVSTKCS 170

BLAST of CsGy2G002440 vs. TAIR10
Match: AT5G14890.1 (NHL domain-containing protein)

HSP 1 Score: 47.8 bits (112), Expect = 7.6e-06
Identity = 30/76 (39.47%), Postives = 39/76 (51.32%), Query Frame = 0

Query: 89  SFISRLGRH---------GRRHSASADFHYDALSYSLNFDEGYDEGHVDDDFPLRNFSSR 148
           +FI R GR+         G        F YD+ SYSLNFD+G   GH +D+FP R++S R
Sbjct: 668 TFIRRFGRNHCCNGGIDGGCNRPEHVSFRYDSWSYSLNFDDGKQTGHFEDEFPYRDYSMR 727

Query: 149 LPASPPKSSPSTTTAS 156
             A    S P +T  S
Sbjct: 728 FAA---PSLPVSTKCS 740

BLAST of CsGy2G002440 vs. TAIR10
Match: AT5G11070.1 (unknown protein)

HSP 1 Score: 41.2 bits (95), Expect = 7.2e-04
Identity = 24/51 (47.06%), Postives = 29/51 (56.86%), Query Frame = 0

Query: 102 SASADFHYDALSYSLNFDEGYDEGHVDDDFPLRNFSSRLPASPPKSSPSTT 153
           S   DF YD LSY+LNF+   D    DDD    NF++RLP SP   + S T
Sbjct: 99  SYPGDFSYDPLSYALNFE---DNVRADDDGSFPNFTARLPQSPVTKTRSAT 146

BLAST of CsGy2G002440 vs. TrEMBL
Match: tr|A0A0A0LL60|A0A0A0LL60_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009350 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.0e-61
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0

Query: 1   MDDSNEHKGNSSPSSLKEMLKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGES 60
           MDDSNEHKGNSSPSSLKEMLKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGES
Sbjct: 1   MDDSNEHKGNSSPSSLKEMLKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGES 60

Query: 61  SPGPLMRCSSAKDKSRSRECHDIKDRLPSFISRLGRHGRRHSASADFHYDALSYSLNFDE 120
           SPGPLMRCSSAKDKSRSRECHDIKDRLPSFISRLGRHGRRHSASADFHYDALSYSLNFDE
Sbjct: 61  SPGPLMRCSSAKDKSRSRECHDIKDRLPSFISRLGRHGRRHSASADFHYDALSYSLNFDE 120

Query: 121 GYDEGHVDDDFPLRNFSSRLPASPPKSSPSTTTASREMITAFS 164
           GYDEGHVDDDFPLRNFSSRLPASPPKSSPSTTTASREMITAFS
Sbjct: 121 GYDEGHVDDDFPLRNFSSRLPASPPKSSPSTTTASREMITAFS 163

BLAST of CsGy2G002440 vs. TrEMBL
Match: tr|A0A1S3CDF1|A0A1S3CDF1_CUCME (uncharacterized protein LOC103499607 OS=Cucumis melo OX=3656 GN=LOC103499607 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.9e-44
Identity = 95/107 (88.79%), Postives = 100/107 (93.46%), Query Frame = 0

Query: 57  DGESSPGPLMRCSSAKDKSRSRECHDIKDRLPSFISRLGRHGRRHSASADFHYDALSYSL 116
           DG+ SPGPL RCSSAKDKSRSRECHDIKDRLP+FISRLGRHGRRHSASADF YDALSYSL
Sbjct: 60  DGD-SPGPLTRCSSAKDKSRSRECHDIKDRLPNFISRLGRHGRRHSASADFRYDALSYSL 119

Query: 117 NFDEGYDEGHVDDDFPLRNFSSRLPASPPKSSPSTTTASREMITAFS 164
           NFDEG    HVDD+FPLRNFSSRLPASPPKSSPS++TASREMITAFS
Sbjct: 120 NFDEGXXXXHVDDEFPLRNFSSRLPASPPKSSPSSSTASREMITAFS 165

BLAST of CsGy2G002440 vs. TrEMBL
Match: tr|A0A1U8AF97|A0A1U8AF97_NELNU (uncharacterized protein LOC104603387 OS=Nelumbo nucifera OX=4432 GN=LOC104603387 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.4e-15
Identity = 51/87 (58.62%), Postives = 65/87 (74.71%), Query Frame = 0

Query: 65  LMRCSSAKDKSRSRECHDIKDRLPSFISRLGRHGRRHSASADFHYDALSYSLNFDEGYDE 124
           L+R SS+  +SR++E  +IK++  + ISR+G+ GRRH  S DF YD LSYSLNFDEG D+
Sbjct: 42  LIRASSSWLRSRTQELPEIKEKCRNLISRIGK-GRRH--SGDFRYDPLSYSLNFDEGIDD 101

Query: 125 GHVDDDFPLRNFSSRLPASPPKSSPST 152
               DDFPLRNFS+RLPASPP S+  T
Sbjct: 102 TQA-DDFPLRNFSARLPASPPMSTTKT 124

BLAST of CsGy2G002440 vs. TrEMBL
Match: tr|A0A2H3YQ82|A0A2H3YQ82_PHODC (uncharacterized protein LOC103715980 OS=Phoenix dactylifera OX=42345 GN=LOC103715980 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-14
Identity = 53/96 (55.21%), Postives = 67/96 (69.79%), Query Frame = 0

Query: 58  GESSPGPLMRCSSAKDKSRSRECHDIKDRLPSFISRLGRHGRRHSASADFHYDALSYSLN 117
           GE  P  L+R SS   +S+++E  +IKDR  S ISR GR  RRH  S+DF YD LSY+LN
Sbjct: 72  GEERPLSLIRSSSVWLRSKAQELPEIKDRCCSLISRRGRQ-RRH--SSDFGYDPLSYALN 131

Query: 118 FDEGY-DEGHVDDDFPLRNFSSRLPASPPKSSPSTT 153
           FDEG+ D+   D++F  RNFSSRLPASPP+  P +T
Sbjct: 132 FDEGFEDDALADEEFRYRNFSSRLPASPPQPPPPST 164

BLAST of CsGy2G002440 vs. TrEMBL
Match: tr|A0A2P5BXN0|A0A2P5BXN0_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_305310 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 8.6e-12
Identity = 46/85 (54.12%), Postives = 57/85 (67.06%), Query Frame = 0

Query: 65  LMRCSSAKDKSRSRE----CHDIKDRLPSFISRLGRHGRRHSASADFHYDALSYSLNFDE 124
           L+R SS   KSR+ +      +IKD+  + ISR+G    R   SADFHYDALSYS NFD+
Sbjct: 67  LLRSSSVWTKSRANDPTSYLPEIKDKCRTLISRIGGRHHRRRHSADFHYDALSYSRNFDQ 126

Query: 125 GYDEGHVD-DDFPLRNFSSRLPASP 145
           G DE + D D+FP R+FSSRLP SP
Sbjct: 127 GGDEENDDVDEFPFRSFSSRLPLSP 151

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011650096.13.1e-61100.00PREDICTED: NEDD8-specific protease 1 [Cucumis sativus] >KGN60746.1 hypothetical ... [more]
XP_008460859.14.5e-4488.79PREDICTED: uncharacterized protein LOC103499607 [Cucumis melo][more]
XP_022938304.15.8e-2864.85uncharacterized protein LOC111444439 [Cucurbita moschata][more]
XP_022965990.12.5e-2664.02uncharacterized protein LOC111465710 [Cucurbita maxima][more]
XP_023536962.17.9e-2562.42uncharacterized protein LOC111798189 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT5G35090.11.9e-0955.36unknown protein[more]
AT3G01430.11.5e-0650.00BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:... [more]
AT5G14890.17.6e-0639.47NHL domain-containing protein[more]
AT5G11070.17.2e-0447.06unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LL60|A0A0A0LL60_CUCSA2.0e-61100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009350 PE=4 SV=1[more]
tr|A0A1S3CDF1|A0A1S3CDF1_CUCME2.9e-4488.79uncharacterized protein LOC103499607 OS=Cucumis melo OX=3656 GN=LOC103499607 PE=... [more]
tr|A0A1U8AF97|A0A1U8AF97_NELNU6.4e-1558.62uncharacterized protein LOC104603387 OS=Nelumbo nucifera OX=4432 GN=LOC104603387... [more]
tr|A0A2H3YQ82|A0A2H3YQ82_PHODC2.4e-1455.21uncharacterized protein LOC103715980 OS=Phoenix dactylifera OX=42345 GN=LOC10371... [more]
tr|A0A2P5BXN0|A0A2P5BXN0_9ROSA8.6e-1254.12Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_305310 PE=4 S... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G002440.1CsGy2G002440.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..163
NoneNo IPR availablePANTHERPTHR33168:SF4SUBFAMILY NOT NAMEDcoord: 5..154
NoneNo IPR availablePANTHERPTHR33168FAMILY NOT NAMEDcoord: 5..154

The following gene(s) are paralogous to this gene:

None