Cla013601 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGATTCGAACGAACACAAAGGAAATGCCTCGCCGTCGTCTCTGAAGGAGATGCTCAAATCTACTCTGTGTTTATCTTGTTGCCTCCGTAAGCACCGGAGTGGCCACCACCACGACCACCACCACCACCACCATCACCACAGGCGGATGTCAACTTCCTCCGACGGCGATTCGCCTGGACCGCTTATGAGGTGTTCTTCTGCTAAGGATAAATCCAGATCTCGCGAGAGTCCTGAGATCAAGGATCGACGTCCGCATTTCATTTCGCGACTCGGCCGCCATGGACGCCGCCACTCTGCTTCAGCCGATTTCCGCTACGATGCGCTTAGTTACGCGCTTAATTTCGATGAAGGATACGATGAAGGTCATGTCGATGATGAGTTTCCTCTCAGGAATTTCTCCTCTAGGTTACCGCCTTCTCCACCGAAATCTTCGCCGTCTTCATCTAATGCGTCGAGGGAGATGATCACGGCGTTTAGTTAA ATGGACGATTCGAACGAACACAAAGGAAATGCCTCGCCGTCGTCTCTGAAGGAGATGCTCAAATCTACTCTGTGTTTATCTTGTTGCCTCCGTAAGCACCGGAGTGGCCACCACCACGACCACCACCACCACCACCATCACCACAGGCGGATGTCAACTTCCTCCGACGGCGATTCGCCTGGACCGCTTATGAGGTGTTCTTCTGCTAAGGATAAATCCAGATCTCGCGAGAGTCCTGAGATCAAGGATCGACGTCCGCATTTCATTTCGCGACTCGGCCGCCATGGACGCCGCCACTCTGCTTCAGCCGATTTCCGCTACGATGCGCTTAGTTACGCGCTTAATTTCGATGAAGGATACGATGAAGGTCATGTCGATGATGAGTTTCCTCTCAGGAATTTCTCCTCTAGGTTACCGCCTTCTCCACCGAAATCTTCGCCGTCTTCATCTAATGCGTCGAGGGAGATGATCACGGCGTTTAGTTAA ATGGACGATTCGAACGAACACAAAGGAAATGCCTCGCCGTCGTCTCTGAAGGAGATGCTCAAATCTACTCTGTGTTTATCTTGTTGCCTCCGTAAGCACCGGAGTGGCCACCACCACGACCACCACCACCACCACCATCACCACAGGCGGATGTCAACTTCCTCCGACGGCGATTCGCCTGGACCGCTTATGAGGTGTTCTTCTGCTAAGGATAAATCCAGATCTCGCGAGAGTCCTGAGATCAAGGATCGACGTCCGCATTTCATTTCGCGACTCGGCCGCCATGGACGCCGCCACTCTGCTTCAGCCGATTTCCGCTACGATGCGCTTAGTTACGCGCTTAATTTCGATGAAGGATACGATGAAGGTCATGTCGATGATGAGTTTCCTCTCAGGAATTTCTCCTCTAGGTTACCGCCTTCTCCACCGAAATCTTCGCCGTCTTCATCTAATGCGTCGAGGGAGATGATCACGGCGTTTAGTTAA MDDSNEHKGNASPSSLKEMLKSTLCLSCCLRKHRSGHHHDHHHHHHHHRRMSTSSDGDSPGPLMRCSSAKDKSRSRESPEIKDRRPHFISRLGRHGRRHSASADFRYDALSYALNFDEGYDEGHVDDEFPLRNFSSRLPPSPPKSSPSSSNASREMITAFS
BLAST of Cla013601 vs. Swiss-Prot
Match: INO80_GIBZE (Putative DNA helicase INO80 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=INO80 PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 9.3e-06 Identity = 31/84 (36.90%), Postives = 35/84 (41.67%), Query Frame = 1
BLAST of Cla013601 vs. TrEMBL
Match: A0A0A0LL60_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G009350 PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 8.3e-78 Identity = 143/163 (87.73%), Postives = 152/163 (93.25%), Query Frame = 1
BLAST of Cla013601 vs. NCBI nr
Match: gi|659071606|ref|XP_008460859.1| (PREDICTED: uncharacterized protein LOC103499607 [Cucumis melo]) HSP 1 Score: 302.4 bits (773), Expect = 4.8e-79 Identity = 145/165 (87.88%), Postives = 152/165 (92.12%), Query Frame = 1
BLAST of Cla013601 vs. NCBI nr
Match: gi|778673966|ref|XP_011650096.1| (PREDICTED: NEDD8-specific protease 1 [Cucumis sativus]) HSP 1 Score: 297.7 bits (761), Expect = 1.2e-77 Identity = 143/163 (87.73%), Postives = 152/163 (93.25%), Query Frame = 1
BLAST of Cla013601 vs. NCBI nr
Match: gi|743808138|ref|XP_010928264.1| (PREDICTED: uncharacterized protein LOC105050093 [Elaeis guineensis]) HSP 1 Score: 112.8 bits (281), Expect = 5.4e-22 Identity = 67/142 (47.18%), Postives = 87/142 (61.27%), Query Frame = 1
BLAST of Cla013601 vs. NCBI nr
Match: gi|720031112|ref|XP_010265711.1| (PREDICTED: uncharacterized protein LOC104603387 [Nelumbo nucifera]) HSP 1 Score: 110.2 bits (274), Expect = 3.5e-21 Identity = 66/135 (48.89%), Postives = 84/135 (62.22%), Query Frame = 1
BLAST of Cla013601 vs. NCBI nr
Match: gi|645275604|ref|XP_008242899.1| (PREDICTED: uncharacterized protein LOC103341197 [Prunus mume]) HSP 1 Score: 109.8 bits (273), Expect = 4.6e-21 Identity = 75/174 (43.10%), Postives = 100/174 (57.47%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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