CsGy1G015820 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGATTGGGGAAAACCGGAAAAGTGAAAAAAGCGTCCAAGTTCATGTAGAGCTAAAACTCGATGGGAAATCCAATCCATTCGGGTTTAAACCGGAAGCCGTAAGCGTAGAAGTACAAATTAGGACGATTTAAATTGAAGCAGAACCCGGTGAGGTGAGATAAGATAATAAGCAAGAAATATTTAATAAAGTGATTCAATGTAGGCCCCCACCTCCATGAAATCAAGAATCTGGACTGTACGATTAGGGGTGTACTGTGTGTACTCAAATTCCCGCGTTTCACGTGAATATTTCCATCCCCATGCATTCCCACTGCCACTGCGGCAGTACCTCCAGCATCTTTTACAATCCCCACTCGCACTTTATCCCACGCCCCTTCATACCCCGACACCCCCAATAAAATCTCTTCCTCTTTTCCCACTCCAACCCATTCCTCCCTCACTCTCTATTCACTCTCTTTTTTGGTCTCCGATGAAGAAGCTCTACCGCAAAAGAGGAACCGTCCACCCGTCTCCCCTTATCATCTCCGATCACCTCTCCTTTCTCCCCACCGTCATTCTCACCCTCGCCGCCGCCCTCTCTCTCCACGACCGTGAGGTTTTAGCCTACCTTATCTCCTCCTGCTCCAATGACTTCACCGCCGTCATCAATTCCTCCAGCCACCGCGGCAAGGCAACTCACCAGAAACACGCCGCTGCCATGGGTGGTTTGGACCATCCCCCGGCGTTCTCCTGCTACTGTTTCCAATGCTACACAAGCTACTGGGTCAGATGGGATTCCTCACCGAATCGGCAGCTGATTCACGAAATCATCGACGCTTATGAAGAGAAATTGGCCGAGAGCAAAGTTGGGAAGAACAATAAGAAAGAGAGGAAGAAGAGAAATAATAGGGGACCGGTTTCCGGTCCGGGTGAGGGGAAAGGGTCTGAAGCGGCGACGAAGGAAGAAGAGTGGAGGGTGACGGAGAGGGAGGTGGCAGAAGGCGGCGAGGAGGGAGCGGAGAAAGGGCCAGTGAGAAGGATTGTGAGTTTGCTAGGGGAAAAAATTTGGGGAAGTTGGAATTAA ATGCTGATTGGGGAAAACCGGAAAAGTGAAAAAAGCGTCCAAGTTCATGTAGAGCTAAAACTCGATGGGAAATCCAATCCATTCGGGTTTAAACCGGAAGCCGTAAGCGTAGAAGCCCCCACCTCCATGAAATCAAGAATCTGGACTGTACGATTAGGGGTGTACTGTGTGTACTCAAATTCCCGCGTTTCACGTGAATATTTCCATCCCCATGCATTCCCACTGCCACTGCGGCAGTACCTCCAGCATCTTTTACAATCCCCACTCGCACTTTATCCCACGCCCCTTCATACCCCGACACCCCCAATAAAATCTCTTCCTCTTTTCCCACTCCAACCCATTCCTCCCTCACTCTCTATTCACTCTCTTTTTTGGTCTCCGATGAAGAAGCTCTACCGCAAAAGAGGAACCGTCCACCCGTCTCCCCTTATCATCTCCGATCACCTCTCCTTTCTCCCCACCGTCATTCTCACCCTCGCCGCCGCCCTCTCTCTCCACGACCGTGAGGTTTTAGCCTACCTTATCTCCTCCTGCTCCAATGACTTCACCGCCGTCATCAATTCCTCCAGCCACCGCGGCAAGGCAACTCACCAGAAACACGCCGCTGCCATGGGTGGTTTGGACCATCCCCCGGCGTTCTCCTGCTACTGTTTCCAATGCTACACAAGCTACTGGGTCAGATGGGATTCCTCACCGAATCGGCAGCTGATTCACGAAATCATCGACGCTTATGAAGAGAAATTGGCCGAGAGCAAAGTTGGGAAGAACAATAAGAAAGAGAGGAAGAAGAGAAATAATAGGGGACCGGTTTCCGGTCCGGGTGAGGGGAAAGGGTCTGAAGCGGCGACGAAGGAAGAAGAGTGGAGGGTGACGGAGAGGGAGGTGGCAGAAGGCGGCGAGGAGGGAGCGGAGAAAGGGCCAGTGAGAAGGATTGTGAGTTTGCTAGGGGAAAAAATTTGGGGAAGTTGGAATTAA ATGCTGATTGGGGAAAACCGGAAAAGTGAAAAAAGCGTCCAAGTTCATGTAGAGCTAAAACTCGATGGGAAATCCAATCCATTCGGGTTTAAACCGGAAGCCGTAAGCGTAGAAGCCCCCACCTCCATGAAATCAAGAATCTGGACTGTACGATTAGGGGTGTACTGTGTGTACTCAAATTCCCGCGTTTCACGTGAATATTTCCATCCCCATGCATTCCCACTGCCACTGCGGCAGTACCTCCAGCATCTTTTACAATCCCCACTCGCACTTTATCCCACGCCCCTTCATACCCCGACACCCCCAATAAAATCTCTTCCTCTTTTCCCACTCCAACCCATTCCTCCCTCACTCTCTATTCACTCTCTTTTTTGGTCTCCGATGAAGAAGCTCTACCGCAAAAGAGGAACCGTCCACCCGTCTCCCCTTATCATCTCCGATCACCTCTCCTTTCTCCCCACCGTCATTCTCACCCTCGCCGCCGCCCTCTCTCTCCACGACCGTGAGGTTTTAGCCTACCTTATCTCCTCCTGCTCCAATGACTTCACCGCCGTCATCAATTCCTCCAGCCACCGCGGCAAGGCAACTCACCAGAAACACGCCGCTGCCATGGGTGGTTTGGACCATCCCCCGGCGTTCTCCTGCTACTGTTTCCAATGCTACACAAGCTACTGGGTCAGATGGGATTCCTCACCGAATCGGCAGCTGATTCACGAAATCATCGACGCTTATGAAGAGAAATTGGCCGAGAGCAAAGTTGGGAAGAACAATAAGAAAGAGAGGAAGAAGAGAAATAATAGGGGACCGGTTTCCGGTCCGGGTGAGGGGAAAGGGTCTGAAGCGGCGACGAAGGAAGAAGAGTGGAGGGTGACGGAGAGGGAGGTGGCAGAAGGCGGCGAGGAGGGAGCGGAGAAAGGGCCAGTGAGAAGGATTGTGAGTTTGCTAGGGGAAAAAATTTGGGGAAGTTGGAATTAA MLIGENRKSEKSVQVHVELKLDGKSNPFGFKPEAVSVEAPTSMKSRIWTVRLGVYCVYSNSRVSREYFHPHAFPLPLRQYLQHLLQSPLALYPTPLHTPTPPIKSLPLFPLQPIPPSLSIHSLFWSPMKKLYRKRGTVHPSPLIISDHLSFLPTVILTLAAALSLHDREVLAYLISSCSNDFTAVINSSSHRGKATHQKHAAAMGGLDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYEEKLAESKVGKNNKKERKKRNNRGPVSGPGEGKGSEAATKEEEWRVTEREVAEGGEEGAEKGPVRRIVSLLGEKIWGSWN
BLAST of CsGy1G015820 vs. NCBI nr
Match: KGN65084.1 (hypothetical protein Csa_1G196260 [Cucumis sativus]) HSP 1 Score: 613.2 bits (1580), Expect = 5.0e-172 Identity = 320/324 (98.77%), Postives = 320/324 (98.77%), Query Frame = 0
BLAST of CsGy1G015820 vs. NCBI nr
Match: XP_004150423.1 (PREDICTED: uncharacterized protein LOC101221021 [Cucumis sativus]) HSP 1 Score: 371.3 bits (952), Expect = 3.3e-99 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of CsGy1G015820 vs. NCBI nr
Match: XP_008458978.1 (PREDICTED: uncharacterized protein LOC103498228 [Cucumis melo]) HSP 1 Score: 312.8 bits (800), Expect = 1.4e-81 Identity = 160/197 (81.22%), Postives = 168/197 (85.28%), Query Frame = 0
BLAST of CsGy1G015820 vs. NCBI nr
Match: XP_022927395.1 (uncharacterized protein LOC111434229 [Cucurbita moschata]) HSP 1 Score: 265.0 bits (676), Expect = 3.3e-67 Identity = 153/200 (76.50%), Postives = 159/200 (79.50%), Query Frame = 0
BLAST of CsGy1G015820 vs. NCBI nr
Match: XP_023520004.1 (uncharacterized protein LOC111783314 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 243.0 bits (619), Expect = 1.4e-60 Identity = 146/203 (71.92%), Postives = 152/203 (74.88%), Query Frame = 0
BLAST of CsGy1G015820 vs. TAIR10
Match: AT1G62422.1 (unknown protein) HSP 1 Score: 124.4 bits (311), Expect = 1.3e-28 Identity = 93/201 (46.27%), Postives = 112/201 (55.72%), Query Frame = 0
BLAST of CsGy1G015820 vs. TAIR10
Match: AT1G12020.1 (unknown protein) HSP 1 Score: 121.3 bits (303), Expect = 1.1e-27 Identity = 104/231 (45.02%), Postives = 123/231 (53.25%), Query Frame = 0
BLAST of CsGy1G015820 vs. TAIR10
Match: AT1G24270.1 (unknown protein) HSP 1 Score: 85.9 bits (211), Expect = 5.0e-17 Identity = 53/134 (39.55%), Postives = 72/134 (53.73%), Query Frame = 0
BLAST of CsGy1G015820 vs. TAIR10
Match: AT5G13090.1 (unknown protein) HSP 1 Score: 73.9 bits (180), Expect = 2.0e-13 Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 0
BLAST of CsGy1G015820 vs. TrEMBL
Match: tr|A0A0A0LVV3|A0A0A0LVV3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G196260 PE=4 SV=1) HSP 1 Score: 613.2 bits (1580), Expect = 3.3e-172 Identity = 320/324 (98.77%), Postives = 320/324 (98.77%), Query Frame = 0
BLAST of CsGy1G015820 vs. TrEMBL
Match: tr|A0A1S3C9P0|A0A1S3C9P0_CUCME (uncharacterized protein LOC103498228 OS=Cucumis melo OX=3656 GN=LOC103498228 PE=4 SV=1) HSP 1 Score: 312.8 bits (800), Expect = 9.2e-82 Identity = 160/197 (81.22%), Postives = 168/197 (85.28%), Query Frame = 0
BLAST of CsGy1G015820 vs. TrEMBL
Match: tr|A0A2I4F828|A0A2I4F828_9ROSI (uncharacterized protein LOC108996384 OS=Juglans regia OX=51240 GN=LOC108996384 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 1.4e-42 Identity = 111/211 (52.61%), Postives = 131/211 (62.09%), Query Frame = 0
BLAST of CsGy1G015820 vs. TrEMBL
Match: tr|A0A061GHH2|A0A061GHH2_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_030338 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 4.6e-41 Identity = 117/212 (55.19%), Postives = 134/212 (63.21%), Query Frame = 0
BLAST of CsGy1G015820 vs. TrEMBL
Match: tr|A0A0D2TLX7|A0A0D2TLX7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G181900 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 3.9e-40 Identity = 117/214 (54.67%), Postives = 135/214 (63.08%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |