CmoCh03G005930 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G005930
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Protein F12F1.11-, putative
Location	Cmo_Chr03 : 5673321 .. 5676074 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGCTTTGCCGTAAAAACACCGTTCATCCATCGCCGCCGATAATTTCCGACTTCCTTTCGTTTTTGCCGGCCGCCATATTCACCCTCACCGTGGCTCTTTCCGCCGACGACAAGGAAGTCCTGGCTTATCTCATCTCCTGTTCCAACACCAGCGCCTCTCTCTCCAACTTATCTAGCACTCGCAAGTCCGGTCGGAAACCCACCGCCGGAAAGGTCGGTGTCGACCACGCTCCGCTTTTCGACTGCGATTGTTTCATGTGCTATCGGCGATACTGGGCGAGATGGGACTCTTCGCCGAATCGGCAACTTATTCATGAAATAATCGAAGCTTACGAAGATGGATTAGCCAAATCCAAAGGCACAGCAACCACACAGAGGAATTTCAAGAAAGAAAAACGGAAGAAAAATAAGGAATCGGTTGCTGGTGAATCAAGCGTGGGGAAGGGGAAGATGAAGGAGGCATCGGAGTCCGTGCAGCAGGAGAGCAGCCGCGATGGGAATGGACAAGAAGAAGAAGGAGAAGAAAGGGGATCGGTAAGTCGGTTCGTGAGTTTTGTGGGCGAGAAAATTTGGAGTGCTTGGGGGTAATGAATTTGGAGTGATCGGTAATTAGTGGATTTTTGTTTGCTCTGGTCTCTGTAAATTACTTGCCTCGTGTAAAAAATGAATGATGATTATGCTATAATATGTGGATGCTCTGTTCTGTGTTAAATTTGAGAATATGGATGAGAGTAGTGGGGATGATGATGGGCACCATTGTTGGCGTTGGAGTTGCAGAGATTCTGATGATTTTCATTTAAAACTGGAAAACGATGCAAGGTATGACCCACCTCTGTCTCTGTCTCTGTCTCTTTCTCTTTCTCTGTACATATATAGAAAGAATATGGAATGCAAGTGATTGGCAAATCGTGCATGCATGCTCTTCGCAACTCATAAATTGATATCCATTTGGTAGTGTTTTTGGGGTTTTTTGGATTGTTGGATTTGGAAAGGTTCTTAGTGGCTGTCCACCACCAAACAACCAAGTAATGGGGAATGATGTAGACCCAAATATTGCAATAAATATTCAAATATTTCAGCCTTACCAACCTTCACGGTTTTTAAATGTGTCTGCCACACTCTTTGGACGCCAACGTCCTCTTACACACTACCCTACATTTATTAGGGAGAGGTTTTCATACACTCCTTATCGTTCTCGTTTCTTTCGAACAGATGTGTGATCTCACAATCCAATCTCTTGGAGTTCAGTGTTCTTGTTGACACAGCTCCTAATGTTTGACTCTTCTACCATTTGTAACCTCTTTTGGGGTCCATTGTTCTTAGTGAAACATCGTCCTGCGTCTATGAGGGAGGGAGAGTTTTCATACACTCCTTATCGTTCCCCTTTCCTTCTAACATATGTATGATCTCAAAATCCAACCTCTTGGGGTCCAATGTTCTTGTTGACACAGCGCCTAATGTCTGACTCTTATACCATTTGTAACCTCTTTTGGAGTCCAGTGTTCTTGGTGACACATCGCCCTGCATCCAACGTTCCCCTCTATAACAGATGTGAGATCTCACAATTCACTCCCTTAAGAGCCCCACCTTCCTATGGTGTCTAACTATGATATCATTTGTAACCGCCCAAGCTCATCGCTAACAAATATTATCCGTTTTGGCTCGTTACGTATCGTCATAAGCCTCGCCGGTTTTAAAACGTGTCTATTAAAGAGAGGTTTTCATACTTTTACAACGAATGTTTCGTTTCCATCTCTAACCAACGTAGGATATCACATTTGATAAGAGTTAACCTCGAGAATGCTAATTGGAATTGAAAATTGTGAAAATTTCTTCGATGTGAAAATTGTGAAGGTTTTTTTTGTTTTTTTTTTTTAACTCTCTTTTGAAGGAAGAAAATGGTATTGAAATGGAGCGATGAGAAGAAAGTAGATATGATCCTTCTCATGTTATTAAATATTTCCTCTTTCTTATAATTTGAAATTCAAAAGTTTGAGATAAAAAGATTTGTGATTAATAACAAAAATGGTTATTTTTAATGCATTAAAAAAGTGTATAAAGAAGAGGTATGATGGGCATAGTAAAATTGGTATTGAGTGCCTAAAAGGGGGCCCTTAAGGCATGCTTATTTGTAGTTTTAGCACTTTAACCATCGCTATTATGAGTTTTAATTAGTGTCATAAAGTGTCCGTGATACATCTTTTTCTCCAAAGGCATAGCACACCCATGTGTCCAAATTTTGCAATTATGGTGGATGATTAGTGTATCCTTCACTTGAGTTCCATAAAGTTTTAAACTTTATGTCACTCTCACCATTACTTAACACATATGACAATGAAAGAAGTTGCAGTCGAATCAATCCCACCATCCATTAAATATAAGTAATGGTCGATTTGATCAACTAGACATGGTTTAACGACACAAGTAACAACTCAACTCCGTCGCTAGCAGATAATATACTCTTTGGACTTTTCCTCAAGATTTTAAAACAATGGTTTCCACGCCCTTATAAAAAATGTTTTGTTCTCCTCCAACCGATGCGGGGTAAAGAACGTTTCGTTCTCCTCCAGCCGATGTGGGGTCTCACAATCCACTCCCCTTACGTGGGAGCCATTTTTGCTTTATTTGTAGGACGTGCCCTGAGACTTTAGGTCAAATCCATTTTTGGATCACTTTTTTCGAGGTTAATCCGACCCTCTTTCCCATGCATTTCTTAGGACTTTCGGGTATGCCACTTTGCATTCTTGA

mRNA sequence

ATGAAGAAGCTTTGCCGTAAAAACACCGTTCATCCATCGCCGCCGATAATTTCCGACTTCCTTTCGTTTTTGCCGGCCGCCATATTCACCCTCACCGTGGCTCTTTCCGCCGACGACAAGGAAGTCCTGGCTTATCTCATCTCCTGTTCCAACACCAGCGCCTCTCTCTCCAACTTATCTAGCACTCGCAAGTCCGGTCGGAAACCCACCGCCGGAAAGGTCGGTGTCGACCACGCTCCGCTTTTCGACTGCGATTGTTTCATGTGCTATCGGCGATACTGGGCGAGATGGGACTCTTCGCCGAATCGGCAACTTATTCATGAAATAATCGAAGCTTACGAAGATGGATTAGCCAAATCCAAAGGCACAGCAACCACACAGAGGAATTTCAAGAAAGAAAAACGGAAGAAAAATAAGGAATCGGTTGCTGGTGAATCAAGCGTGGGGAAGGGGAAGATGAAGGAGGCATCGGAGTCCGTGCAGCAGGAGAGCAGCCGCGATGGGAATGGACAAGAAGAAGAAGGAGAAGAAAGGGGATCGGTAAGTCGGTTCGTGAGTTTTGTGGGCGAGAAAATTTGGAGTGCTTGGGGGACTTTCGGGTATGCCACTTTGCATTCTTGA

Coding sequence (CDS)

ATGAAGAAGCTTTGCCGTAAAAACACCGTTCATCCATCGCCGCCGATAATTTCCGACTTCCTTTCGTTTTTGCCGGCCGCCATATTCACCCTCACCGTGGCTCTTTCCGCCGACGACAAGGAAGTCCTGGCTTATCTCATCTCCTGTTCCAACACCAGCGCCTCTCTCTCCAACTTATCTAGCACTCGCAAGTCCGGTCGGAAACCCACCGCCGGAAAGGTCGGTGTCGACCACGCTCCGCTTTTCGACTGCGATTGTTTCATGTGCTATCGGCGATACTGGGCGAGATGGGACTCTTCGCCGAATCGGCAACTTATTCATGAAATAATCGAAGCTTACGAAGATGGATTAGCCAAATCCAAAGGCACAGCAACCACACAGAGGAATTTCAAGAAAGAAAAACGGAAGAAAAATAAGGAATCGGTTGCTGGTGAATCAAGCGTGGGGAAGGGGAAGATGAAGGAGGCATCGGAGTCCGTGCAGCAGGAGAGCAGCCGCGATGGGAATGGACAAGAAGAAGAAGGAGAAGAAAGGGGATCGGTAAGTCGGTTCGTGAGTTTTGTGGGCGAGAAAATTTGGAGTGCTTGGGGGACTTTCGGGTATGCCACTTTGCATTCTTGA

Homology

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BLAST of CmoCh03G005930 vs. TrEMBL
Match: A0A0A0KMY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511820 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.3e-78
Identity = 159/203 (78.33%), Postives = 170/203 (83.74%), Query Frame = 1


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVALSADDKEVLAYLISCSNTSASLSNLS 60
           MKKLCRK+TVHPSPPIISDFLSFLPAAIF LT+ALSADDKEVLAYLISCSN++ASLSNLS
Sbjct: 1   MKKLCRKSTVHPSPPIISDFLSFLPAAIFALTLALSADDKEVLAYLISCSNSTASLSNLS 60

Query: 61  STRKSGRKPTAGKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120
             RK+GRK  A KVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEII+AYEDGL KS
Sbjct: 61  GGRKNGRKIAALKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIDAYEDGLTKS 120

Query: 121 KGTATTQRNFKKEKRKKNKESVAGESSVGKGKMKEASESVQQESSRDGNGQEE------E 180
           K T +TQRN KKE+RKKN ES +GESS GKGK  E      QE+ R  N +EE      E
Sbjct: 121 KATTSTQRNCKKERRKKNNESGSGESSSGKGKTNEVLLDSVQETGRQRNEKEEEEEEEGE 180

Query: 181 GEERGSVSRFVSFVGEKIWSAWG 198
           GEERGSV RFVSFVGEKIW AWG
Sbjct: 181 GEERGSVRRFVSFVGEKIWGAWG 203

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BLAST of CmoCh03G005930 vs. TrEMBL
Match: A0A061GHH2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030338 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 5.0e-43
Identity = 111/221 (50.23%), Postives = 136/221 (61.54%), Query Frame = 1


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVALSADDKEVLAYLISCSNTSASLSNLS 60
           MKKL R+ TVHPSPPI +D LSFLPA I TL  ALS DD+EVLAYLISCSN      N S
Sbjct: 1   MKKLYRRGTVHPSPPITTDHLSFLPATILTLAAALSPDDREVLAYLISCSNND--FGNFS 60

Query: 61  STRKSGRK-PTAGKVGV----DHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYED 120
           S RK+  K PT   +      DH PLF CDCF CY  YW RWDSSPNRQLIHEII+A+ED
Sbjct: 61  SHRKNTHKNPTKRSISSSSDHDHPPLFTCDCFRCYMSYWVRWDSSPNRQLIHEIIDAFED 120

Query: 121 GLAKSKGTATTQRNFKKEKRKKNKESVAGESSVGKGKMKEASESVQQESSRD-------- 180
           GLA+SK     +   KK+++KK      G  + G G +K    S++++ S +        
Sbjct: 121 GLAQSK-----KAKSKKDRKKK------GGGADGSGGLKRPELSLRKDDSSELKSVEEST 180

Query: 181 -----GNGQE------EEGEERGSVSRFVSFVGEKIWSAWG 198
                G+  E      EEG E+GSV  FV+F+GE+IW+ WG
Sbjct: 181 SSSSIGSSGEVCADDGEEGTEKGSVRSFVNFIGERIWNVWG 208

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BLAST of CmoCh03G005930 vs. TrEMBL
Match: A0A0L9VF38_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g196300 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.4e-42
Identity = 109/219 (49.77%), Postives = 131/219 (59.82%), Query Frame = 1


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVALSADDKEVLAYLISCSNTSASLSNLS 60
           MKKL  K TVHPSPP+ISD L+FLPAAI TL  ALS DD+EVL+YLISCS+ +AS +  +
Sbjct: 1   MKKLYHKGTVHPSPPLISDHLAFLPAAILTLATALSPDDREVLSYLISCSSAAASSTFSA 60

Query: 61  STRKSGRKPTAGKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120
           + R+     TA      H+P F+C CF CY  YW RWD SPNRQLIHEII+AYED LA+ 
Sbjct: 61  NPRRKSAAETA------HSPAFNCSCFGCYTSYWVRWDESPNRQLIHEIIDAYEDSLAQI 120

Query: 121 KGTATTQRNFKKEKRKKNKESVAGESSVGKGKMKEASE----------------SVQQES 180
                     KKEKR   K   AG SS    K   +SE                S + E+
Sbjct: 121 GNKGKKNGKGKKEKRNHRK---AGSSSSSSSKHAHSSELKRSELVSLASLATHDSAELEA 180

Query: 181 SRDGNGQEEEG------EERGSVSRFVSFVGEKIWSAWG 198
             +GNG  +EG      EE+GSV RFVSF+GE+IW  WG
Sbjct: 181 VVEGNGGGDEGCEGVAVEEKGSVRRFVSFIGERIWGGWG 210

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BLAST of CmoCh03G005930 vs. TrEMBL
Match: A0A0S3S3X8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G090400 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.4e-42
Identity = 109/219 (49.77%), Postives = 131/219 (59.82%), Query Frame = 1


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVALSADDKEVLAYLISCSNTSASLSNLS 60
           MKKL  K TVHPSPP+ISD L+FLPAAI TL  ALS DD+EVL+YLISCS+ +AS +  +
Sbjct: 1   MKKLYHKGTVHPSPPLISDHLAFLPAAILTLATALSPDDREVLSYLISCSSAAASSTFSA 60

Query: 61  STRKSGRKPTAGKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120
           + R+     TA      H+P F+C CF CY  YW RWD SPNRQLIHEII+AYED LA+ 
Sbjct: 61  NPRRKSAAETA------HSPAFNCSCFGCYTSYWVRWDESPNRQLIHEIIDAYEDSLAQI 120

Query: 121 KGTATTQRNFKKEKRKKNKESVAGESSVGKGKMKEASE----------------SVQQES 180
                     KKEKR   K   AG SS    K   +SE                S + E+
Sbjct: 121 GNKGKKNGKGKKEKRNHRK---AGSSSSSSSKHAHSSELKRSELVSLASLATHDSAELEA 180

Query: 181 SRDGNGQEEEG------EERGSVSRFVSFVGEKIWSAWG 198
             +GNG  +EG      EE+GSV RFVSF+GE+IW  WG
Sbjct: 181 VVEGNGGGDEGCEGVAVEEKGSVRRFVSFIGERIWGGWG 210

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BLAST of CmoCh03G005930 vs. TrEMBL
Match: A0A067GSU4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027822mg PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.5e-42
Identity = 110/223 (49.33%), Postives = 133/223 (59.64%), Query Frame = 1


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVALSADDKEVLAYLISCSNTSASLSNLS 60
           MKKL RK TVHPSPPIISD LSFLPAAI TLT ALS++D+EVLAYLISCSN ++S    S
Sbjct: 1   MKKLYRKGTVHPSPPIISDHLSFLPAAILTLTAALSSEDREVLAYLISCSNNNSSGGGSS 60

Query: 61  S--------TRKSG-------RKPTAGKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQL 120
           S         +KSG       R  TAG    DH PLF CDCF CY  YW +WD+SPNRQL
Sbjct: 61  SFQGQRKSNQQKSGGVSLAKSRSSTAGNNNNDHPPLFTCDCFRCYMSYWVKWDASPNRQL 120

Query: 121 IHEIIEAYEDGLAKSKGTATTQRNFKKEKRKKNKESVAGESSVGKGKMKE----ASESVQ 180
           IHEII+A+ED        +   R  K  K+ K K     +      ++++    A+ES  
Sbjct: 121 IHEIIDAFED-----HEMSHNNRKVKNSKKDKKKRGSGTDHKKNDHQLQDQQLLAAESES 180

Query: 181 QESSRDGNGQE------EEGEERGSVSRFVSFVGEKIWSAWGT 199
              +RDGN  E      EE EE+GSV  FVSF+GE+ W  W +
Sbjct: 181 FGENRDGNDHEDCNNKGEEEEEKGSVRSFVSFIGERFWGVWSS 218

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BLAST of CmoCh03G005930 vs. TAIR10
Match: AT1G62422.1 (AT1G62422.1 unknown protein)

HSP 1 Score: 155.6 bits (392), Expect = 3.3e-38
Identity = 95/206 (46.12%), Postives = 125/206 (60.68%), Query Frame = 1


Query: 1   MKKLCRKNTVHPSPP--IISD--FLSFLPAAIFTLTVALSADDKEVLAYLISCSNTSASL 60
           MKKLCRK TVHPSPP  I +D  FLS LP AI +L  ALS +D+EVLAYLIS S  S  +
Sbjct: 1   MKKLCRKGTVHPSPPPAIKTDEQFLSLLPVAILSLVAALSVEDREVLAYLISNSGDSNRI 60

Query: 61  SNLSSTRKSGRKPTAGKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDG 120
           S L   ++             H+PLF CDCF CY  YW RWD+SP RQLIHEII+AYED 
Sbjct: 61  SRLKKNKEDNH----------HSPLFLCDCFSCYTSYWVRWDTSPRRQLIHEIIDAYEDS 120

Query: 121 LAKSKGTATTQRNFKKEKRKKNKESVAGESSVGKGKMKEASESVQQ----ESSRDGN-GQ 180
           L   K         KK++RK++ ++    +S+G  ++ E   S  +    +S +DGN G 
Sbjct: 121 LEMKKK--------KKDRRKRSGKASGRVNSIGTSRLSELGSSSAEFAGGDSEKDGNCGG 180

Query: 181 EEEGEERGSVSRFVSFVGEKIWSAWG 198
           EE  +E+GSV + +SF+G++    WG
Sbjct: 181 EEAEKEKGSVGKVMSFIGQRFLGVWG 188

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BLAST of CmoCh03G005930 vs. TAIR10
Match: AT1G12020.1 (AT1G12020.1 unknown protein)

HSP 1 Score: 143.7 bits (361), Expect = 1.3e-34
Identity = 97/229 (42.36%), Postives = 126/229 (55.02%), Query Frame = 1


Query: 1   MKKLCRKNTVHPSPPIISD---FLSFLPAAIFTLTVALSADDKEVLAYLISCSNTSASLS 60
           MKKL RK TVHPSPP I      L+ LP AIF+L   LS +D+EVLAYLIS ++ S   +
Sbjct: 1   MKKLYRKGTVHPSPPQIKSNDHLLTLLPVAIFSLAAVLSPEDREVLAYLISTASYSGERN 60

Query: 61  NLSSTRKSGRKPTAGKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGL 120
             S   K+     A  +  +H+PLF CDCF CY  YW RWDSSP+RQLIHEII+A+ED L
Sbjct: 61  PTSRLNKTKAHKKA--LFDNHSPLFHCDCFSCYTSYWVRWDSSPSRQLIHEIIDAFEDSL 120

Query: 121 AKSKGTATTQRNFKKEKRKKNKESVA------------------GESSVGKGKMKEASES 180
            K+K         KK++RK++ +S +                  GES V       +SE 
Sbjct: 121 EKNKNKKKNVTG-KKDRRKRSGKSSSLLASSSFSTDDSEIPSRLGESVVNSCPCTSSSEL 180

Query: 181 VQ-----------QESSRDGNGQEEEGEERGSVSRFVSFVGEKIWSAWG 198
            Q            E    G+  E+  EE+G+V RFVSF+GEK++  WG
Sbjct: 181 TQDGGGCSGGLEPMEFFCAGDACEKVEEEKGTVRRFVSFIGEKVFGVWG 226

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BLAST of CmoCh03G005930 vs. TAIR10
Match: AT5G13090.1 (AT5G13090.1 unknown protein)

HSP 1 Score: 104.4 bits (259), Expect = 8.7e-23
Identity = 64/155 (41.29%), Postives = 85/155 (54.84%), Query Frame = 1


Query: 3   KLCRKNTVHPSPPIISD--------------------FLSFLPAAIFTLTVALSADDKEV 62
           K+ +K  V+PSPP                         L  LPA I  L   LS++++EV
Sbjct: 2   KMKKKGKVYPSPPPPPQSSSSSSSSNHLNEEDDDSLSVLKLLPATILVLVSVLSSEEREV 61

Query: 63  LAYLISCSNTSASLSNLSSTRKSGRKPTAGKVGVDHAP-LFDCDCFMCYRRYWARWDSSP 122
           LAYLI+   T +   N SS  K+ +K  + K   +H P +FDC+CF CY  YW RWDSSP
Sbjct: 62  LAYLITRGTTISDRGNSSSKNKTKKK--SNKSSKNHKPPVFDCECFDCYTNYWFRWDSSP 121

Query: 123 NRQLIHEIIEAYED--GLAKSKGTATTQRNFKKEK 135
           NR+LIHEIIEA+E+  G   S   + ++R  KKEK
Sbjct: 122 NRELIHEIIEAFENHHGEENSASRSKSKRGKKKEK 154

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BLAST of CmoCh03G005930 vs. TAIR10
Match: AT1G24270.1 (AT1G24270.1 unknown protein)

HSP 1 Score: 95.1 bits (235), Expect = 5.3e-20
Identity = 64/158 (40.51%), Postives = 89/158 (56.33%), Query Frame = 1


Query: 3   KLCRKNTVHPSPPIIS-------DFLS---FLPAAIFTLTVALSADDKEVLAYLISCSNT 62
           K+ +K  VHPSPP+ S       D LS    L +AI  L   LSA+D EVLAYLI+ S  
Sbjct: 56  KVMKKGKVHPSPPLPSSSSSNGDDSLSVFKLLQSAILVLVSVLSAEDLEVLAYLITRSLN 115

Query: 63  SASLSNLSSTRKSGRKPTAGKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIEA 122
           + ++  +S  +K   K          APL DC CF CY  YW++WDSS NR+LI++IIEA
Sbjct: 116 TTNV--VSCKKKRSHK----------APLLDCQCFDCYTSYWSKWDSSSNRELINQIIEA 175

Query: 123 YEDGLAKSKGTATTQRNFKKEKRKKNKESVAGESSVGK 151
           +ED L + + +A+     KK K++  K  ++ E    K
Sbjct: 176 FEDHLTRDEISAS--HTSKKNKKRAKKIEISEEQPQNK 199

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BLAST of CmoCh03G005930 vs. NCBI nr
Match: gi|659079065|ref|XP_008440055.1| (PREDICTED: uncharacterized protein LOC103484646 [Cucumis melo])

HSP 1 Score: 301.2 bits (770), Expect = 1.4e-78
Identity = 158/203 (77.83%), Postives = 170/203 (83.74%), Query Frame = 1


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVALSADDKEVLAYLISCSNTSASLSNLS 60
           MKKLCRK+TVHPSPPIISDFLSFLPAAIF LTVALSADDKEVLAYLISCSN++AS SNLS
Sbjct: 1   MKKLCRKSTVHPSPPIISDFLSFLPAAIFALTVALSADDKEVLAYLISCSNSTASFSNLS 60

Query: 61  STRKSGRKPTAGKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120
            +RK+GRK  A KVG+DHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEII+AYEDGL KS
Sbjct: 61  GSRKNGRKIAALKVGIDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIDAYEDGLTKS 120

Query: 121 KGTATTQRNFKKEKRKKNKESVAGESSVGKGKMKEASESVQQESSRDGNGQEEE------ 180
           K T +TQRN KKE+RKKN ES  GESS+GKGK  E      QE+ R  N +EEE      
Sbjct: 121 KATTSTQRNCKKERRKKNNESGNGESSLGKGKTNEVLLDSVQETGRQRNEKEEEEEEEEG 180

Query: 181 GEERGSVSRFVSFVGEKIWSAWG 198
           GEERGSV RFVSFVGEKIW AWG
Sbjct: 181 GEERGSVRRFVSFVGEKIWGAWG 203

[Close]

BLAST of CmoCh03G005930 vs. NCBI nr
Match: gi|449434008|ref|XP_004134788.1| (PREDICTED: uncharacterized protein LOC101204826 [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 1.8e-78
Identity = 159/203 (78.33%), Postives = 170/203 (83.74%), Query Frame = 1


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVALSADDKEVLAYLISCSNTSASLSNLS 60
           MKKLCRK+TVHPSPPIISDFLSFLPAAIF LT+ALSADDKEVLAYLISCSN++ASLSNLS
Sbjct: 1   MKKLCRKSTVHPSPPIISDFLSFLPAAIFALTLALSADDKEVLAYLISCSNSTASLSNLS 60

Query: 61  STRKSGRKPTAGKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120
             RK+GRK  A KVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEII+AYEDGL KS
Sbjct: 61  GGRKNGRKIAALKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIDAYEDGLTKS 120

Query: 121 KGTATTQRNFKKEKRKKNKESVAGESSVGKGKMKEASESVQQESSRDGNGQEE------E 180
           K T +TQRN KKE+RKKN ES +GESS GKGK  E      QE+ R  N +EE      E
Sbjct: 121 KATTSTQRNCKKERRKKNNESGSGESSSGKGKTNEVLLDSVQETGRQRNEKEEEEEEEGE 180

Query: 181 GEERGSVSRFVSFVGEKIWSAWG 198
           GEERGSV RFVSFVGEKIW AWG
Sbjct: 181 GEERGSVRRFVSFVGEKIWGAWG 203

[Close]

BLAST of CmoCh03G005930 vs. NCBI nr
Match: gi|1009107203|ref|XP_015878402.1| (PREDICTED: uncharacterized protein LOC107414739 [Ziziphus jujuba])

HSP 1 Score: 195.3 bits (495), Expect = 1.1e-46
Identity = 117/220 (53.18%), Postives = 146/220 (66.36%), Query Frame = 1


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVALSADDKEVLAYLISCSNTSASLSNLS 60
           MKKL RK TVHPSPPIISD LSFLPAAI TLTVALS +D+EVLAYLISCSN SA +++ S
Sbjct: 1   MKKLYRKGTVHPSPPIISDHLSFLPAAILTLTVALSPEDREVLAYLISCSN-SAGVNSSS 60

Query: 61  STRKSGRKPTAGKVGV-------------DHAPLFDCDCFMCYRRYWARWDSSPNRQLIH 120
           S ++   + + GK GV             DH P F+C+CF CY  +W RWDSSPNRQLIH
Sbjct: 61  SGQRRTTQRSCGKGGVAGATSSSSSGGGGDHPPQFNCNCFRCYTSFWVRWDSSPNRQLIH 120

Query: 121 EIIEAYEDG-LAKSKGTATTQRNFKKEKRKK----------NKESVAGESSVGKGKMKEA 180
           EII+A+EDG LA+SKG      N +KE+RK+          + E    E S GK ++ E+
Sbjct: 121 EIIDAFEDGLLAQSKG--AKNNNNRKERRKRGGGGGGGNNGSGELKRSELSSGKDELVES 180

Query: 181 SESVQQESSRDGNGQEEEGEERGSVSRFVSFVGEKIWSAW 197
              V++ SS  G+G  +E  E+GSV RFVSF+GE+IW  W
Sbjct: 181 ESVVEETSSGGGDGVGDEEAEKGSVRRFVSFIGERIWGVW 217

[Close]

BLAST of CmoCh03G005930 vs. NCBI nr
Match: gi|645242323|ref|XP_008227499.1| (PREDICTED: uncharacterized protein LOC103327009 [Prunus mume])

HSP 1 Score: 188.3 bits (477), Expect = 1.3e-44
Identity = 117/220 (53.18%), Postives = 138/220 (62.73%), Query Frame = 1


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVALSADDKEVLAYLISCSNTSASLSNLS 60
           MKKL RK TVHPSPPIISD L+FLPA I TL  ALS +D+EVLAYLISCSN+S +LS+ S
Sbjct: 1   MKKLYRKGTVHPSPPIISDQLAFLPATILTLAAALSPEDREVLAYLISCSNSSINLSSSS 60

Query: 61  STRKS--GRKPTAGKV-----------GVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIH 120
           S+  S   RK TA              G DH   F+CDCF CY+ YW RWD SPNRQLIH
Sbjct: 61  SSSSSYGSRKSTAASAAKKGAAKGSGSGGDHPARFNCDCFRCYKSYWVRWDESPNRQLIH 120

Query: 121 EIIEAYEDG-LAKSKGTATTQRNFK-KEKRKKNKESVAGESSVGKGKMKEAS-------- 180
           EII+A+EDG LA+SKG A ++ N     K ++NK    G SS G+ K  E S        
Sbjct: 121 EIIDAFEDGVLAESKGQANSKYNNNISRKERRNKRGHNGGSS-GELKRSELSLKKKELAQ 180

Query: 181 -ESVQQESSRDGNGQEEEGEERGSVSRFVSFVGEKIWSAW 197
                QE+   G   +EE  E+GSV RFVSFVGE+IW  W
Sbjct: 181 AHMADQETGGGGGEVDEEDSEKGSVRRFVSFVGERIWGVW 219

[Close]

BLAST of CmoCh03G005930 vs. NCBI nr
Match: gi|1021508315|ref|XP_016197514.1| (PREDICTED: uncharacterized protein LOC107638672 [Arachis ipaensis])

HSP 1 Score: 186.4 bits (472), Expect = 4.9e-44
Identity = 111/219 (50.68%), Postives = 137/219 (62.56%), Query Frame = 1


Query: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVALSADDKEVLAYLISCSNTSASLSNLS 60
           MKKL RK TVHPSPPIISD LSFLPA I TLT AL+ +D+EVLAYLISCS++S +    +
Sbjct: 1   MKKLYRKGTVHPSPPIISDQLSFLPATILTLTAALTPEDREVLAYLISCSSSSNNPRRTT 60

Query: 61  STRKSGRKPTAGKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120
           +T  S     +G  G DHAP+F C+CF CY  YW RWDSSPNRQLIHEII+A+E+ LA+ 
Sbjct: 61  TTTTSRSSSASG--GGDHAPVFSCNCFRCYMSYWVRWDSSPNRQLIHEIIDAFEEWLAQK 120

Query: 121 KGTATTQRNFKKEKRKK-----NKESVAGE-----SSVGKGKMKEASESVQQES------ 180
            G        +K+KR K     NK   +GE      SV   +  E+S S   ES      
Sbjct: 121 GGKKHHNNGGRKDKRNKRGSNSNKMQQSGELLNRNGSVPSSESTESSSSTDLESVVVAVA 180

Query: 181 ------SRDGNGQEEEGEERGSVSRFVSFVGEKIWSAWG 198
                   D +G+  E +E+GSV RFVSF+GE+IW AWG
Sbjct: 181 VENSSNHSDEDGERVEEDEKGSVRRFVSFIGERIWGAWG 217

The following BLAST results are available for this feature:

BLAST of CmoCh03G005930 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh03G005930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMY4_CUCSA	1.3e-78	78.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511820 PE=4 SV=1	[more]
A0A061GHH2_THECC	5.0e-43	50.23	Uncharacterized protein OS=Theobroma cacao GN=TCM_030338 PE=4 SV=1	[more]
A0A0L9VF38_PHAAN	1.4e-42	49.77	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g196300 PE=4 SV=1	[more]
A0A0S3S3X8_PHAAN	1.4e-42	49.77	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G090400 PE=...	[more]
A0A067GSU4_CITSI	2.5e-42	49.33	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027822mg PE=4 SV=1	[more]

BLAST of CmoCh03G005930 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G62422.1	3.3e-38	46.12	unknown protein	[more]
AT1G12020.1	1.3e-34	42.36	unknown protein	[more]
AT5G13090.1	8.7e-23	41.29	unknown protein	[more]
AT1G24270.1	5.3e-20	40.51	unknown protein	[more]

BLAST of CmoCh03G005930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079065\|ref\|XP_008440055.1\|	1.4e-78	77.83	PREDICTED: uncharacterized protein LOC103484646 [Cucumis melo]	[more]
gi\|449434008\|ref\|XP_004134788.1\|	1.8e-78	78.33	PREDICTED: uncharacterized protein LOC101204826 [Cucumis sativus]	[more]
gi\|1009107203\|ref\|XP_015878402.1\|	1.1e-46	53.18	PREDICTED: uncharacterized protein LOC107414739 [Ziziphus jujuba]	[more]
gi\|645242323\|ref\|XP_008227499.1\|	1.3e-44	53.18	PREDICTED: uncharacterized protein LOC103327009 [Prunus mume]	[more]
gi\|1021508315\|ref\|XP_016197514.1\|	4.9e-44	50.68	PREDICTED: uncharacterized protein LOC107638672 [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G005930.1	CmoCh03G005930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31903	FAMILY NOT NAMED	coord: 1..196 score: 1.7
None	No IPR available	PANTHER	PTHR31903:SF5	SUBFAMILY NOT NAMED	coord: 1..196 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G005930	Cucsa.044840	Cucumber (Gy14) v1	cgycmoB0042
CmoCh03G005930	CmaCh03G005650	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G005930	Csa6G511820	Cucumber (Chinese Long) v2	cmocuB670
CmoCh03G005930	MELO3C007428	Melon (DHL92) v3.5.1	cmomeB600
CmoCh03G005930	ClCG01G021560	Watermelon (Charleston Gray)	cmowcgB575
CmoCh03G005930	CSPI06G33130	Wild cucumber (PI 183967)	cmocpiB681
CmoCh03G005930	Lsi01G004690	Bottle gourd (USVL1VR-Ls)	cmolsiB582
CmoCh03G005930	Cp4.1LG19g08130	Cucurbita pepo (Zucchini)	cmocpeB624
CmoCh03G005930	Cp4.1LG10g10080	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G005930	Cp4.1LG20g06400	Cucurbita pepo (Zucchini)	cmocpeB630
CmoCh03G005930	MELO3C007428.2	Melon (DHL92) v3.6.1	cmomedB686
CmoCh03G005930	CsaV3_6G048580	Cucumber (Chinese Long) v3	cmocucB0793
CmoCh03G005930	Cla97C01G021130	Watermelon (97103) v2	cmowmbB642
CmoCh03G005930	Bhi03G000486	Wax gourd	cmowgoB0781
CmoCh03G005930	CsGy6G032710	Cucumber (Gy14) v2	cgybcmoB811
CmoCh03G005930	CsGy1G015820	Cucumber (Gy14) v2	cgybcmoB118
CmoCh03G005930	Carg13664	Silver-seed gourd	carcmoB1246
CmoCh03G005930	Carg07870	Silver-seed gourd	carcmoB0886
CmoCh03G005930	Carg00488	Silver-seed gourd	carcmoB0551

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh03G005930	CmoCh07G003320	Cucurbita moschata (Rifu)	cmocmoB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G005930	Cucurbita maxima (Rimu)	cmacmoB419
CmoCh03G005930	Cucurbita maxima (Rimu)	cmacmoB858
CmoCh03G005930	Watermelon (97103) v1	cmowmB623