Carg07870 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07870
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein F12F1.11-, putative
Location	Cucurbita_argyrosperma_scaffold_066 : 539402 .. 539992 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGCTCTGCCGGAAAAGCTCCGTCCATCCATCCACGCCGATCATCTCCGACTTCCTTTCGTTTCTTCCCGCCGCCATATTTGCTCTCACGGTGGCGCTATCCGCCGATGACAAAGAAGTCCTGGCCTATCTCATCGCCTGTTCCAACACCAGCAACCGAAAAGCCGCTCGGAAAATCCCCAGCGGGAAGAGCGGTGTGGATCACGCTCCGCTCTTTGACTGCGATTGTTTCATGTGCTATCGGCGTTACTGGGGGAGATGGGACTCGTCGCCCAATCGGCAACTAATTCACGAAGTAATCGAAGCTTATGAAGACGGATTAGCTAAATCCAAAGCCGCAGCAACGTCGCAGAGAAATTGCAAGAAAGAGAGACGGAAGAAGAAGAACGAATCGGGCCCGGATGAGTCGAATCGGTCCGAATCAAGAGTCGGAAAGGTGAAGATGAACGAGACATCGGGTTGTGTGCAGCAAGAGAGCAGCCGCGACAGTAACAGAAAAGAGGAGGAGGAGGAAGAAGGAGAAAGAGGATCGGTTAGAAGGTTCGTGAGCTTTGTGGGGGAGAAAATTTGGGGTGCTTGGGGCTAA

mRNA sequence

ATGAAGAAGCTCTGCCGGAAAAGCTCCGTCCATCCATCCACGCCGATCATCTCCGACTTCCTTTCGTTTCTTCCCGCCGCCATATTTGCTCTCACGGTGGCGCTATCCGCCGATGACAAAGAAGTCCTGGCCTATCTCATCGCCTGTTCCAACACCAGCAACCGAAAAGCCGCTCGGAAAATCCCCAGCGGGAAGAGCGGTGTGGATCACGCTCCGCTCTTTGACTGCGATTGTTTCATGTGCTATCGGCGTTACTGGGGGAGATGGGACTCGTCGCCCAATCGGCAACTAATTCACGAAGTAATCGAAGCTTATGAAGACGGATTAGCTAAATCCAAAGCCGCAGCAACGTCGCAGAGAAATTGCAAGAAAGAGAGACGGAAGAAGAAGAACGAATCGGGCCCGGATGAGTCGAATCGGTCCGAATCAAGAGTCGGAAAGGTGAAGATGAACGAGACATCGGGTTGTGTGCAGCAAGAGAGCAGCCGCGACAGTAACAGAAAAGAGGAGGAGGAGGAAGAAGGAGAAAGAGGATCGGTTAGAAGGTTCGTGAGCTTTGTGGGGGAGAAAATTTGGGGTGCTTGGGGCTAA

Coding sequence (CDS)

ATGAAGAAGCTCTGCCGGAAAAGCTCCGTCCATCCATCCACGCCGATCATCTCCGACTTCCTTTCGTTTCTTCCCGCCGCCATATTTGCTCTCACGGTGGCGCTATCCGCCGATGACAAAGAAGTCCTGGCCTATCTCATCGCCTGTTCCAACACCAGCAACCGAAAAGCCGCTCGGAAAATCCCCAGCGGGAAGAGCGGTGTGGATCACGCTCCGCTCTTTGACTGCGATTGTTTCATGTGCTATCGGCGTTACTGGGGGAGATGGGACTCGTCGCCCAATCGGCAACTAATTCACGAAGTAATCGAAGCTTATGAAGACGGATTAGCTAAATCCAAAGCCGCAGCAACGTCGCAGAGAAATTGCAAGAAAGAGAGACGGAAGAAGAAGAACGAATCGGGCCCGGATGAGTCGAATCGGTCCGAATCAAGAGTCGGAAAGGTGAAGATGAACGAGACATCGGGTTGTGTGCAGCAAGAGAGCAGCCGCGACAGTAACAGAAAAGAGGAGGAGGAGGAAGAAGGAGAAAGAGGATCGGTTAGAAGGTTCGTGAGCTTTGTGGGGGAGAAAATTTGGGGTGCTTGGGGCTAA

Protein sequence

MKKLCRKSSVHPSTPIISDFLSFLPAAIFALTVALSADDKEVLAYLIACSNTSNRKAARKIPSGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAKSKAAATSQRNCKKERRKKKNESGPDESNRSESRVGKVKMNETSGCVQQESSRDSNRKEEEEEEGERGSVRRFVSFVGEKIWGAWG

Homology

[Close]

BLAST of Carg07870 vs. NCBI nr
Match: XP_022926320.1 (uncharacterized protein LOC111433506 [Cucurbita moschata])

HSP 1 Score: 336.7 bits (862), Expect = 5.5e-89
Identity = 188/196 (95.92%), Postives = 188/196 (95.92%), Query Frame = 0


Query: 1   MKKLCRKSSVHPSTPIISDFLSFLPAAIFALTVALSADDKEVLAYLIACSNTSNRKAARK 60
           MKKLCRKSSVHPSTPIISDFLSFLPA IFALTVALSADDKEVLAYLIACSNTSNRKAARK
Sbjct: 1   MKKLCRKSSVHPSTPIISDFLSFLPATIFALTVALSADDKEVLAYLIACSNTSNRKAARK 60

Query: 61  IPSGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAKSKAAATSQR 120
           IPSGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAKSKAAATSQR
Sbjct: 61  IPSGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAKSKAAATSQR 120

Query: 121 NCKXXXXXXXXXSGPDESNRSESRVGKVKMNETSGCVQQXXXXXXXXXXXXXXXXERGSV 180
           NCKXXXXXXXXXSGPDESNRSESRVGKVKMNETSGCVQQ      XXXXXXXXX ERGSV
Sbjct: 121 NCKXXXXXXXXXSGPDESNRSESRVGKVKMNETSGCVQQ-ESSRDXXXXXXXXXGERGSV 180

Query: 181 RRFVSFVGEKIWGAWG 197
           RRFVSFVGEKIWGAWG
Sbjct: 181 RRFVSFVGEKIWGAWG 195

[Close]

BLAST of Carg07870 vs. NCBI nr
Match: XP_023518184.1 (uncharacterized protein LOC111781728 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.9 bits (829), Expect = 3.7e-85
Identity = 180/196 (91.84%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 1   MKKLCRKSSVHPSTPIISDFLSFLPAAIFALTVALSADDKEVLAYLIACSNTSNRKAARK 60
           MKKLCRKSSVHPSTPIISDFLSFLPAAIFALTVALSADDKEVLAYLI+CSNTS+RK ARK
Sbjct: 1   MKKLCRKSSVHPSTPIISDFLSFLPAAIFALTVALSADDKEVLAYLISCSNTSSRKGARK 60

Query: 61  IPSGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAKSKAAATSQR 120
           I SGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAKSK AATSQR
Sbjct: 61  IASGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAKSKPAATSQR 120

Query: 121 NCKXXXXXXXXXSGPDESNRSESRVGKVKMNETSGCVQQXXXXXXXXXXXXXXXXERGSV 180
           NCK  XXXXXXX  PDESNRSESRVGKVKMNETSGCVQQ      XXXXXXXXX ERGSV
Sbjct: 121 NCKKEXXXXXXXXXPDESNRSESRVGKVKMNETSGCVQQ-ESSRDXXXXXXXXXGERGSV 180

Query: 181 RRFVSFVGEKIWGAWG 197
           RRFVSFVGEKIWGAWG
Sbjct: 181 RRFVSFVGEKIWGAWG 195

[Close]

BLAST of Carg07870 vs. NCBI nr
Match: XP_023003821.1 (uncharacterized protein LOC111497289 [Cucurbita maxima])

HSP 1 Score: 311.2 bits (796), Expect = 2.5e-81
Identity = 166/196 (84.69%), Postives = 171/196 (87.24%), Query Frame = 0


Query: 1   MKKLCRKSSVHPSTPIISDFLSFLPAAIFALTVALSADDKEVLAYLIACSNTSNRKAARK 60
           MKKL RKSSVHPSTPIISDFLSFLPAAIF+LT+ALSADDKEVLAYLI+CSNTS+RKAA K
Sbjct: 1   MKKLRRKSSVHPSTPIISDFLSFLPAAIFSLTMALSADDKEVLAYLISCSNTSSRKAAGK 60

Query: 61  IPSGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAKSKAAATSQR 120
           I SGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAKSKAAATSQR
Sbjct: 61  ISSGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAKSKAAATSQR 120

Query: 121 NCKXXXXXXXXXSGPDESNRSESRVGKVKMNETSGCVQQXXXXXXXXXXXXXXXXERGSV 180
           NCK          G  E NRSESRVGKVKMNETSGCVQQ        XXXXXXX +RGSV
Sbjct: 121 NCKKERRKKKNEPGSGELNRSESRVGKVKMNETSGCVQQ-ESSRDSNXXXXXXXGDRGSV 180

Query: 181 RRFVSFVGEKIWGAWG 197
           RRFVSFVGEKIWGAWG
Sbjct: 181 RRFVSFVGEKIWGAWG 195

[Close]

BLAST of Carg07870 vs. NCBI nr
Match: XP_023544435.1 (uncharacterized protein LOC111804018 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62
Identity = 136/205 (66.34%), Postives = 144/205 (70.24%), Query Frame = 0


Query: 1   MKKLCRKSSVHPSTPIISDFLSFLPAAIFALTVALSADDKEVLAYLIACSNT-------- 60
           MKKLCRK++VHPS PIISDFLSFLPAAIF LTV LSADDKEVLAYLI+CSNT        
Sbjct: 1   MKKLCRKNTVHPSPPIISDFLSFLPAAIFTLTVVLSADDKEVLAYLISCSNTSASLSNLS 60

Query: 61  SNRKAARKIPSGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAKS 120
           S RK+ RK  +GK GVDHAP+FDCDCFMCYRRYW RWDSSPNRQLIHE+IEAYEDGLAKS
Sbjct: 61  STRKSGRKPTAGKVGVDHAPIFDCDCFMCYRRYWARWDSSPNRQLIHEIIEAYEDGLAKS 120

Query: 121 KAAATSQRNCKXXXXXXXXXSGPDESNRSESRVGK-VKMNETSGCVQQXXXXXXXXXXXX 180
           K  AT+QRN K             ES   ES VGK  KM E S  VQQ            
Sbjct: 121 KGTATTQRNFKKERRKKN-----KESVAGESSVGKGKKMKEASESVQQ--ESSRDGNGQE 180

Query: 181 XXXXERGSVRRFVSFVGEKIWGAWG 197
               ERGSV RFVSFVGEKIW AWG
Sbjct: 181 EEGEERGSVSRFVSFVGEKIWSAWG 198

[Close]

BLAST of Carg07870 vs. NCBI nr
Match: XP_022132898.1 (uncharacterized protein LOC111005626 [Momordica charantia])

HSP 1 Score: 232.3 bits (591), Expect = 1.5e-57
Identity = 142/215 (66.05%), Postives = 159/215 (73.95%), Query Frame = 0


Query: 1   MKKLCRKSSVHPSTPIISDFLSFLPAAIFALTVALSADDKEVLAYLIACSNTSN------ 60
           MKKLCRKS+VHPS PIISDFLSFLPAAI ALT+ALSADDKEVLAYLI+CS++ +      
Sbjct: 1   MKKLCRKSTVHPSPPIISDFLSFLPAAILALTLALSADDKEVLAYLISCSSSGSNATASN 60

Query: 61  ----RKAARKIPSGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLA 120
               RKA+RK   GK GVDHAPLFDCDCFMCYRRYW RWD+SPNRQLIHE+I+AYE+GLA
Sbjct: 61  FSGARKASRKHGGGKGGVDHAPLFDCDCFMCYRRYWARWDASPNRQLIHEIIDAYEEGLA 120

Query: 121 KSK--AAATSQRNCKXXXXXXXXXSGPDESNRSE-------SRVGKVKMNETSGCVQQXX 180
           K+K   +  + RNCK         S P ESNRSE       SR  +    + +G    XX
Sbjct: 121 KTKGTGSGATPRNCKRERRKRNTESAPGESNRSEVKGEGSDSRPLETG-RDANGXXXXXX 180

Query: 181 XXXXXXXXXXXXXXERGSVRRFVSFVGEKIWGAWG 197
           XXXXXXXXXXXXXX  GSVRRFVSFVGEKIW AWG
Sbjct: 181 XXXXXXXXXXXXXXXXGSVRRFVSFVGEKIWSAWG 214

[Close]

BLAST of Carg07870 vs. TAIR10
Match: AT1G12020.1 (unknown protein)

HSP 1 Score: 132.1 bits (331), Expect = 3.7e-31
Identity = 92/226 (40.71%), Postives = 122/226 (53.98%), Query Frame = 0


Query: 1   MKKLCRKSSVHPSTPIISD---FLSFLPAAIFALTVALSADDKEVLAYLIACSNTSNRK- 60
           MKKL RK +VHPS P I      L+ LP AIF+L   LS +D+EVLAYLI+ ++ S  + 
Sbjct: 1   MKKLYRKGTVHPSPPQIKSNDHLLTLLPVAIFSLAAVLSPEDREVLAYLISTASYSGERN 60

Query: 61  ---AARKIPSGKSGV--DHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAK 120
                 K  + K  +  +H+PLF CDCF CY  YW RWDSSP+RQLIHE+I+A+ED L K
Sbjct: 61  PTSRLNKTKAHKKALFDNHSPLFHCDCFSCYTSYWVRWDSSPSRQLIHEIIDAFEDSLEK 120

Query: 121 SKAAATSQRNCKXXXXXXXXXSG-------PDESNRSESRVGKVKMN------------E 180
           +           XXXXXXXXX           + +   SR+G+  +N            +
Sbjct: 121 NXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSTDDSEIPSRLGESVVNSCPCTSSSELTQD 180

Query: 181 TSGCV--QQXXXXXXXXXXXXXXXXERGSVRRFVSFVGEKIWGAWG 197
             GC    +                E+G+VRRFVSF+GEK++G WG
Sbjct: 181 GGGCSGGLEPMEFFCAGDACEKVEEEKGTVRRFVSFIGEKVFGVWG 226

[Close]

BLAST of Carg07870 vs. TAIR10
Match: AT1G62422.1 (unknown protein)

HSP 1 Score: 132.1 bits (331), Expect = 3.7e-31
Identity = 89/200 (44.50%), Postives = 114/200 (57.00%), Query Frame = 0


Query: 1   MKKLCRKSSVHPSTP--IISD--FLSFLPAAIFALTVALSADDKEVLAYLIACSNTSNRK 60
           MKKLCRK +VHPS P  I +D  FLS LP AI +L  ALS +D+EVLAYLI+ S  SNR 
Sbjct: 1   MKKLCRKGTVHPSPPPAIKTDEQFLSLLPVAILSLVAALSVEDREVLAYLISNSGDSNR- 60

Query: 61  AARKIPSGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAKSKAAA 120
              ++   K    H+PLF CDCF CY  YW RWD+SP RQLIHE+I+AYED L       
Sbjct: 61  -ISRLKKNKEDNHHSPLFLCDCFSCYTSYWVRWDTSPRRQLIHEIIDAYEDSL------- 120

Query: 121 TSQRNCKXXXXXXXXXSGPDESNRSESRVGKVKMNETSGCVQQXXXXXXXXXXXXXXXXE 180
              +   XXXXXXXXX     ++   SR+   ++  +S                     E
Sbjct: 121 -EMKXXXXXXXXXXXXXXGRVNSIGTSRLS--ELGSSSAEFAGGDSEKDGNCGGEEAEKE 180

Query: 181 RGSVRRFVSFVGEKIWGAWG 197
           +GSV + +SF+G++  G WG
Sbjct: 181 KGSVGKVMSFIGQRFLGVWG 188

[Close]

BLAST of Carg07870 vs. TAIR10
Match: AT1G24270.1 (unknown protein)

HSP 1 Score: 102.1 bits (253), Expect = 4.1e-22
Identity = 63/134 (47.01%), Postives = 82/134 (61.19%), Query Frame = 0


Query: 3   KLCRKSSVHPSTPIIS-------DFLS---FLPAAIFALTVALSADDKEVLAYLIACS-N 62
           K+ +K  VHPS P+ S       D LS    L +AI  L   LSA+D EVLAYLI  S N
Sbjct: 56  KVMKKGKVHPSPPLPSSSSSNGDDSLSVFKLLQSAILVLVSVLSAEDLEVLAYLITRSLN 115

Query: 63  TSNRKAARKIPSGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAK 122
           T+N  + +K  S K     APL DC CF CY  YW +WDSS NR+LI+++IEA+ED L +
Sbjct: 116 TTNVVSCKKKRSHK-----APLLDCQCFDCYTSYWSKWDSSSNRELINQIIEAFEDHLTR 175

Query: 123 SKAAA--TSQRNCK 124
            + +A  TS++N K
Sbjct: 176 DEISASHTSKKNKK 184

[Close]

BLAST of Carg07870 vs. TAIR10
Match: AT5G13090.1 (unknown protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13
Identity = 28/48 (58.33%), Postives = 38/48 (79.17%), Query Frame = 0


Query: 72  PLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAKSKAAATSQ 120
           P+FDC+CF CY  YW RWDSSPNR+LIHE+IEA+E+   +  +A+ S+
Sbjct: 98  PVFDCECFDCYTNYWFRWDSSPNRELIHEIIEAFENHHGEENSASRSK 145

[Close]

BLAST of Carg07870 vs. TrEMBL
Match: tr|A0A0A0KMY4|A0A0A0KMY4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511820 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.3e-54
Identity = 144/204 (70.59%), Postives = 156/204 (76.47%), Query Frame = 0


Query: 1   MKKLCRKSSVHPSTPIISDFLSFLPAAIFALTVALSADDKEVLAYLIACSNTS------- 60
           MKKLCRKS+VHPS PIISDFLSFLPAAIFALT+ALSADDKEVLAYLI+CSN++       
Sbjct: 1   MKKLCRKSTVHPSPPIISDFLSFLPAAIFALTLALSADDKEVLAYLISCSNSTASLSNLS 60

Query: 61  -NRKAARKIPSGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAKS 120
             RK  RKI + K GVDHAPLFDCDCFMCYRRYW RWDSSPNRQLIHE+I+AYEDGL KS
Sbjct: 61  GGRKNGRKIAALKVGVDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIDAYEDGLTKS 120

Query: 121 KAAATSQRNCKXXXXXXXXXSGPDESNRSESRVGKVKMNETSGCVQQXXXXXXXXXXXXX 180
           KA  ++Q    XXXXXXXXX               V ++        XXXXXXXXXXXXX
Sbjct: 121 KATTSTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDSVQE-TXXXXXXXXXXXXXXX 180

Query: 181 XXXERGSVRRFVSFVGEKIWGAWG 197
           XXX RGSVRRFVSFVGEKIWGAWG
Sbjct: 181 XXXXRGSVRRFVSFVGEKIWGAWG 203

[Close]

BLAST of Carg07870 vs. TrEMBL
Match: tr|A0A1S3B0U5|A0A1S3B0U5_CUCME (uncharacterized protein LOC103484646 OS=Cucumis melo OX=3656 GN=LOC103484646 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.8e-54
Identity = 143/204 (70.10%), Postives = 154/204 (75.49%), Query Frame = 0


Query: 1   MKKLCRKSSVHPSTPIISDFLSFLPAAIFALTVALSADDKEVLAYLIACSNTS------- 60
           MKKLCRKS+VHPS PIISDFLSFLPAAIFALTVALSADDKEVLAYLI+CSN++       
Sbjct: 1   MKKLCRKSTVHPSPPIISDFLSFLPAAIFALTVALSADDKEVLAYLISCSNSTASFSNLS 60

Query: 61  -NRKAARKIPSGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGLAKS 120
            +RK  RKI + K G+DHAPLFDCDCFMCYRRYW RWDSSPNRQLIHE+I+AYEDGL KS
Sbjct: 61  GSRKNGRKIAALKVGIDHAPLFDCDCFMCYRRYWARWDSSPNRQLIHEIIDAYEDGLTKS 120

Query: 121 KAAATSQRNCKXXXXXXXXXSGPDESNRSESRVGKVKMNETSGCVQQXXXXXXXXXXXXX 180
           KA  ++QRNC XXXXXXXXX                           XXXXXXXXXXXXX
Sbjct: 121 KATTSTQRNC-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXERGSVRRFVSFVGEKIWGAWG 197
           XXX    VRRFVSFVGEKIWGAWG
Sbjct: 181 XXXXXXXVRRFVSFVGEKIWGAWG 203

[Close]

BLAST of Carg07870 vs. TrEMBL
Match: tr|A0A2I4F828|A0A2I4F828_9ROSI (uncharacterized protein LOC108996384 OS=Juglans regia OX=51240 GN=LOC108996384 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.0e-39
Identity = 95/199 (47.74%), Postives = 120/199 (60.30%), Query Frame = 0


Query: 1   MKKLCRKSSVHPSTPIISDFLSFLPAAIFALTVALSADDKEVLAYLIACSNTS-NRKAAR 60
           MKKL R+ SVHPS PIISD LSFLPA I  LT ALS +D+EVLAYL++CSN+S N    R
Sbjct: 1   MKKLYRRGSVHPSPPIISDHLSFLPATILTLTAALSPEDREVLAYLLSCSNSSVNFDGRR 60

Query: 61  KIPSGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYE-DGLAKSKAAATS 120
           +    K G DH P F+C+CF CY  YW RWDSSPNRQ IHE+I+A+E + +A  K +  S
Sbjct: 61  RTTHHKGGADHPPQFNCNCFRCYTSYWVRWDSSPNRQAIHEIIDAFEAELMAHGKKSGKS 120

Query: 121 QRNCKXXXXXXXXXSGPDESNRSESRVGKVKMNETS--GCVQQXXXXXXXXXXXXXXXXE 180
           ++  +         +G  E  R E+   K + +ET   G                    E
Sbjct: 121 RKERR----KRGCHNGSAELKRLEASSVKDESSETDSLGGESGNSLHDGAGGGDGEDGLE 180

Query: 181 RGSVRRFVSFVGEKIWGAW 196
           +GSVRRFVSF+GE+IWG W
Sbjct: 181 KGSVRRFVSFIGERIWGVW 195

[Close]

BLAST of Carg07870 vs. TrEMBL
Match: tr|A0A061GHH2|A0A061GHH2_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_030338 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.3e-38
Identity = 105/209 (50.24%), Postives = 124/209 (59.33%), Query Frame = 0


Query: 1   MKKLCRKSSVHPSTPIISDFLSFLPAAIFALTVALSADDKEVLAYLIACSN------TSN 60
           MKKL R+ +VHPS PI +D LSFLPA I  L  ALS DD+EVLAYLI+CSN      +S+
Sbjct: 1   MKKLYRRGTVHPSPPITTDHLSFLPATILTLAAALSPDDREVLAYLISCSNNDFGNFSSH 60

Query: 61  RKAARKIP-----SGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGL 120
           RK   K P     S  S  DH PLF CDCF CY  YW RWDSSPNRQLIHE+I+A+EDGL
Sbjct: 61  RKNTHKNPTKRSISSSSDHDHPPLFTCDCFRCYMSYWVRWDSSPNRQLIHEIIDAFEDGL 120

Query: 121 AKSK--AAATSQRNCKXXXXXXXXXSGPDESNRSESRVGKVKMNETSGCVQQXXXXXXXX 180
           A+SK            XXXXXXXX   P+ S R +    ++K  E S             
Sbjct: 121 AQSKKXXXXXXXXXXXXXXXXXXXLKRPELSLRKDDS-SELKSVEESTSSSSIGSSGEVC 180

Query: 181 XXXXXXXXERGSVRRFVSFVGEKIWGAWG 197
                   E+GSVR FV+F+GE+IW  WG
Sbjct: 181 ADDGEEGTEKGSVRSFVNFIGERIWNVWG 208

[Close]

BLAST of Carg07870 vs. TrEMBL
Match: tr|F6HIF9|F6HIF9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0059g01580 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.5e-38
Identity = 107/207 (51.69%), Postives = 129/207 (62.32%), Query Frame = 0


Query: 1   MKKLCRKSSVHPS-TPIISDFLSFLPAAIFALTVALSADDKEVLAYLIACSNTS-NRKAA 60
           MKKL RK  VHPS  P ISD L+ LPA I  LT ALS +DK+VLAYLI+CS  S NRK  
Sbjct: 1   MKKLYRKGKVHPSPPPPISDHLALLPATILTLTAALSPEDKQVLAYLISCSAASPNRKPT 60

Query: 61  RK--IPSGKSGVDHAPLFDCDCFMCYRRYWGRWDSSPNRQLIHEVIEAYEDGL-----AK 120
           +K  + +G  GVDH P+F+CDCF CY  YW RWD+SPNRQLIHE+I+AYEDGL      K
Sbjct: 61  QKTSVSAGGGGVDHQPIFNCDCFRCYMSYWARWDTSPNRQLIHEIIDAYEDGLFQEKKKK 120

Query: 121 SKAAATSQRNCKXXXXXXXXXSGPDESNRSESRVGKVKMNETS---GCVQQXXXXXXXXX 180
           +K A T + + K         +  D     E   G+++  E S        XXXXXXXXX
Sbjct: 121 TKGAKTKRSDSKIKNRAAQELN-DDSGFGKEGESGELESVEASCSGXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXERGSVRRFVSFVGEKIWGAW 196
           XX     E+GSVR  VSF+GE+ WG W
Sbjct: 181 XXGEMGLEKGSVRGLVSFIGERFWGVW 206

The following BLAST results are available for this feature:

BLAST of Carg07870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926320.1	5.5e-89	95.92	uncharacterized protein LOC111433506 [Cucurbita moschata]	[more]
XP_023518184.1	3.7e-85	91.84	uncharacterized protein LOC111781728 [Cucurbita pepo subsp. pepo]	[more]
XP_023003821.1	2.5e-81	84.69	uncharacterized protein LOC111497289 [Cucurbita maxima]	[more]
XP_023544435.1	1.1e-62	66.34	uncharacterized protein LOC111804018 [Cucurbita pepo subsp. pepo]	[more]
XP_022132898.1	1.5e-57	66.05	uncharacterized protein LOC111005626 [Momordica charantia]	[more]

BLAST of Carg07870 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12020.1	3.7e-31	40.71	unknown protein	[more]
AT1G62422.1	3.7e-31	44.50	unknown protein	[more]
AT1G24270.1	4.1e-22	47.01	unknown protein	[more]
AT5G13090.1	1.2e-13	58.33	unknown protein	[more]

BLAST of Carg07870 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg07870 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KMY4\|A0A0A0KMY4_CUCSA	1.3e-54	70.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511820 PE=4 SV=1	[more]
tr\|A0A1S3B0U5\|A0A1S3B0U5_CUCME	3.8e-54	70.10	uncharacterized protein LOC103484646 OS=Cucumis melo OX=3656 GN=LOC103484646 PE=...	[more]
tr\|A0A2I4F828\|A0A2I4F828_9ROSI	2.0e-39	47.74	uncharacterized protein LOC108996384 OS=Juglans regia OX=51240 GN=LOC108996384 P...	[more]
tr\|A0A061GHH2\|A0A061GHH2_THECC	1.3e-38	50.24	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_030338 PE=4 SV=1	[more]
tr\|F6HIF9\|F6HIF9_VITVI	6.5e-38	51.69	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0059g01580 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07870-RA	Carg07870-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..179
None	No IPR available	PANTHER	PTHR31903:SF6	F12F1.11-RELATED	coord: 2..196
None	No IPR available	PANTHER	PTHR31903	FAMILY NOT NAMED	coord: 2..196

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07870	Csa6G511820	Cucumber (Chinese Long) v2	carcuB0663
Carg07870	MELO3C007428	Melon (DHL92) v3.5.1	carmeB0642
Carg07870	ClCG01G021560	Watermelon (Charleston Gray)	carwcgB0623
Carg07870	CSPI06G33130	Wild cucumber (PI 183967)	carcpiB0672
Carg07870	Cucsa.044840	Cucumber (Gy14) v1	carcgyB0714
Carg07870	CmaCh03G005650	Cucurbita maxima (Rimu)	carcmaB0912
Carg07870	CmoCh07G003320	Cucurbita moschata (Rifu)	carcmoB0888
Carg07870	CmoCh03G005930	Cucurbita moschata (Rifu)	carcmoB0886
Carg07870	Lsi01G004690	Bottle gourd (USVL1VR-Ls)	carlsiB585
Carg07870	Cp4.1LG19g08130	Cucurbita pepo (Zucchini)	carcpeB0915
Carg07870	Cp4.1LG10g10080	Cucurbita pepo (Zucchini)	carcpeB0913
Carg07870	CsGy6G032710	Cucumber (Gy14) v2	carcgybB0640
Carg07870	MELO3C007428.2	Melon (DHL92) v3.6.1	carmedB0652
Carg07870	CsaV3_6G048580	Cucumber (Chinese Long) v3	carcucB0674
Carg07870	Cla97C01G021130	Watermelon (97103) v2	carwmbB0669
Carg07870	Bhi03G000486	Wax gourd	carwgoB0759

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07870	Carg00488	Silver-seed gourd	carcarB425
Carg07870	Carg13664	Silver-seed gourd	carcarB563

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07870	Cucurbita maxima (Rimu)	carcmaB0907
Carg07870	Cucurbita maxima (Rimu)	carcmaB0914
Carg07870	Watermelon (97103) v1	carwmB0642