ClCG01G009950 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G009950
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Protein F12F1.11-, putative
Location	CG_Chr01 : 14564517 .. 14566083 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGCTCTACCGGAAAAGAGGAACGGTCCACCCATCGCCGCCGATCATTTCCGATCACCTCTCGTTTCTCCCCACCACCATCCTCACCCTCGCAGCGGCGCTCTCGCTGGAGGACCGAGAGGTTTTGGCCTACCTTATCTCCTCCTGCTCCAACGACTTCACCGCCGTCAACAACTCCTCCAGCCACCGCGGCAAGACGGTCCACCAGAAACCCTCCGCTGCCGCAAAAGGCGGTTCCGATCACTCCCCGGCGTTCTCCTGCGACTGTTTCCGGTGCTACACCAGCTACTGGGTTAGATGGGATTCCTCTCCGAATCGGCAGCTCATACACGAAATCATCGACGCTTATGAAGAAAAATTGGCTGAGATCAAAGCCGGGAAGAAAAATAAGAAAGAGAGGAAGAAGAGGAATAGCAGGCCGGTTTCCGGTCCGGGTGAGGGGAAAGGGTCGGAACCGGCGGCGAAGGAAGAAGAGTTAAGGGTGACGGAGAGGGAGGCGGCGGAAGGCGGGGAGGTTGAGGCGGAGAAAGGGGCGGTGAGGATGATTGTGAGTTTCATAGGGGAAAGAATCTGGGGAGGTTGGAATTAAGTGATTGATTTTCCATTGATGATGAATTTGGAGGTTTTGTGTTTGTTAGTTAATTAAATACTTTTGCAGAAATTATGGAGGAATTGAAGAAGAAGAAGAAGAAAAAAGGTGTTGTCATAAAATTAATTAAGCTACCTTCATCATCATCATCATCATCATCATCATCTTCTTCTTCTTCTTTTGATTCTGCTTCTGCTTCTTAGTTGTATATAGAATCTTATGTTTTGCATGTACAAATTTATCACTATACACACACACACACACACACACACATATATATATAGCAGTTTTTGAATTTGGGAAGATTTTATGTATAGAATGTTTATTTAGAATGAGTTGCCGATGCCACATTTTAATTCTTTTTTTGCTTAAATTATCCTTTTCTCCAATTTCAGACTGTCTACTACTCGTTTATTTATTTATTTTTGTTAACAAAAAAAAAAAAAGAATTCTTTTTGTATTAGCATTTTTAACATATATTATTTTAATGAAGATTATTATTTTTTTTTCTCATTTAATTTCCTTAATATCTAACTAAATTTAGGTAAAATTGTAAAAACCAACTCTGAAATATGAAAGTAGTTATAATTATATCTTAAACTTTCAGTTTTAGAAATTAATCTCTCAAATTTTTATAAATGTTAAAATTGGTCAAATTTAACATTTAAACTTATATAATATATTTGAATAATTTTTAAGTTTTATTTTTATTCTTTGTAGGTTTAATTTTTACCATTATTGTAAGTTTGAGGTCCATTTAACATTTTAAAAAAATTTAAAGAGTTAATTCTTATAATTTAAAATTTAAAAGTGTAATTGTAATTACCATCATATGCTTTGGGATAGTTTTTGTAATTTACCTTAAAATTTAATAAACTTTAAAGTATACAAAATAATATTATATTCTATTTTTATTTTTATTTTTATTATATATATTTAGAAAATCAAGGTTTTGAGGTCAATATATTTGTAA

mRNA sequence

ATGAAGAAGCTCTACCGGAAAAGAGGAACGGTCCACCCATCGCCGCCGATCATTTCCGATCACCTCTCGTTTCTCCCCACCACCATCCTCACCCTCGCAGCGGCGCTCTCGCTGGAGGACCGAGAGGTTTTGGCCTACCTTATCTCCTCCTGCTCCAACGACTTCACCGCCGTCAACAACTCCTCCAGCCACCGCGGCAAGACGGTCCACCAGAAACCCTCCGCTGCCGCAAAAGGCGGTTCCGATCACTCCCCGGCGTTCTCCTGCGACTGTTTCCGGTGCTACACCAGCTACTGGGTTAGATGGGATTCCTCTCCGAATCGGCAGCTCATACACGAAATCATCGACGCTTATGAAGAAAAATTGGCTGAGATCAAAGCCGGGAAGAAAAATAAGAAAGAGAGGAAGAAGAGGAATAGCAGGCCGGTTTCCGGTCCGGGTGAGGGGAAAGGGTCGGAACCGGCGGCGAAGGAAGAAGAGTTAAGGGTGACGGAGAGGGAGGCGGCGGAAGGCGGGGAGGTTGAGGCGGAGAAAGGGGCGAAAATCAAGGTTTTGAGGTCAATATATTTGTAA

Coding sequence (CDS)

ATGAAGAAGCTCTACCGGAAAAGAGGAACGGTCCACCCATCGCCGCCGATCATTTCCGATCACCTCTCGTTTCTCCCCACCACCATCCTCACCCTCGCAGCGGCGCTCTCGCTGGAGGACCGAGAGGTTTTGGCCTACCTTATCTCCTCCTGCTCCAACGACTTCACCGCCGTCAACAACTCCTCCAGCCACCGCGGCAAGACGGTCCACCAGAAACCCTCCGCTGCCGCAAAAGGCGGTTCCGATCACTCCCCGGCGTTCTCCTGCGACTGTTTCCGGTGCTACACCAGCTACTGGGTTAGATGGGATTCCTCTCCGAATCGGCAGCTCATACACGAAATCATCGACGCTTATGAAGAAAAATTGGCTGAGATCAAAGCCGGGAAGAAAAATAAGAAAGAGAGGAAGAAGAGGAATAGCAGGCCGGTTTCCGGTCCGGGTGAGGGGAAAGGGTCGGAACCGGCGGCGAAGGAAGAAGAGTTAAGGGTGACGGAGAGGGAGGCGGCGGAAGGCGGGGAGGTTGAGGCGGAGAAAGGGGCGAAAATCAAGGTTTTGAGGTCAATATATTTGTAA

Protein sequence

MKKLYRKRGTVHPSPPIISDHLSFLPTTILTLAAALSLEDREVLAYLISSCSNDFTAVNNSSSHRGKTVHQKPSAAAKGGSDHSPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEEKLAEIKAGKKNKKERKKRNSRPVSGPGEGKGSEPAAKEEELRVTEREAAEGGEVEAEKGAKIKVLRSIYL

Homology

[Close]

BLAST of ClCG01G009950 vs. TrEMBL
Match: A0A0A0LVV3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G196260 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.0e-79
Identity = 156/180 (86.67%), Postives = 158/180 (87.78%), Query Frame = 1


Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTTILTLAAALSLEDREVLAYLISSCSNDFTAVNN 60
           MKKLYRKRGTVHPSP IISDHLSFLPT ILTLAAALSL DREVLAYLISSCSNDFTAV N
Sbjct: 124 MKKLYRKRGTVHPSPLIISDHLSFLPTVILTLAAALSLHDREVLAYLISSCSNDFTAVIN 183

Query: 61  SSSHRGKTVHQKPSAAAKGGSDHSPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE 120
           SSSHRGK  HQK  AAA GG DH PAFSC CF+CYTSYWVRWDSSPNRQLIHEIIDAYEE
Sbjct: 184 SSSHRGKATHQK-HAAAMGGLDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYEE 243

Query: 121 KLAEIKAGKKNKKERKKRNSR-PVSGPGEGKGSEPAAKEEELRVTEREAAEGGEVEAEKG 180
           KLAE K GK NKKERKKRN+R PVSGPGEGKGSE A KEEE RVTERE AEGGE  AEKG
Sbjct: 244 KLAESKVGKNNKKERKKRNNRGPVSGPGEGKGSEAATKEEEWRVTEREVAEGGEEGAEKG 302

[Close]

BLAST of ClCG01G009950 vs. TrEMBL
Match: A0A061GHH2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030338 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-44
Identity = 106/178 (59.55%), Postives = 125/178 (70.22%), Query Frame = 1


Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTTILTLAAALSLEDREVLAYLISSCSNDFTAVNN 60
           MKKLYR RGTVHPSPPI +DHLSFLP TILTLAAALS +DREVLAYLIS  +NDF    N
Sbjct: 1   MKKLYR-RGTVHPSPPITTDHLSFLPATILTLAAALSPDDREVLAYLISCSNNDF---GN 60

Query: 61  SSSHRGKTVHQKP---SAAAKGGSDHSPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDA 120
            SSHR K  H+ P   S ++    DH P F+CDCFRCY SYWVRWDSSPNRQLIHEIIDA
Sbjct: 61  FSSHR-KNTHKNPTKRSISSSSDHDHPPLFTCDCFRCYMSYWVRWDSSPNRQLIHEIIDA 120

Query: 121 YEEKLAEIKAGKKNKKERKKRNSRPVSGPGEGKGSEPAAKEEELRVTEREAAEGGEVE 176
           +E+ LA+ K   K+KK+RKK+      G  +G G     K  EL + + +++E   VE
Sbjct: 121 FEDGLAQSKKA-KSKKDRKKK-----GGGADGSG---GLKRPELSLRKDDSSELKSVE 164

[Close]

BLAST of ClCG01G009950 vs. TrEMBL
Match: A0A0D2TLX7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G181900 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.0e-42
Identity = 105/185 (56.76%), Postives = 124/185 (67.03%), Query Frame = 1


Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTTILTLAAALSLEDREVLAYLISSCSNDFTAVNN 60
           MKKLYR RGTVHPSP   +DHLSFLP TILTL AALS EDREVLAYLIS  +NDF+   N
Sbjct: 1   MKKLYR-RGTVHPSPLSTTDHLSFLPATILTLVAALSPEDREVLAYLISCANNDFS---N 60

Query: 61  SSSHRGKTVHQ--KPSAAAKGGSDHS--PAFSCDCFRCYTSYWVRWDSSPNRQLIHEIID 120
            SSHR  T     K S +   GSDH   P F+CDCFRCY SYWVRWDSS NRQLIHEIID
Sbjct: 61  FSSHRKNTQKHPTKRSISFSSGSDHDHPPLFTCDCFRCYMSYWVRWDSSSNRQLIHEIID 120

Query: 121 AYEEKLAEIKAGKKNKKERKKRNSRPVSGPGEGKGSEPAAKEEELRVTEREAAEGGEVEA 180
           A+E+ LA+ K   K+KK+RKK+     SG  +G G    +K  +L + + E+ +    EA
Sbjct: 121 AFEDGLAQSKK-TKSKKDRKKK-----SGGADGSG---GSKRTDLSLGKDESCDSKSAEA 172

Query: 181 EKGAK 182
              +K
Sbjct: 181 SSSSK 172

[Close]

BLAST of ClCG01G009950 vs. TrEMBL
Match: B9HZI9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s00770g PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 6.6e-42
Identity = 107/197 (54.31%), Postives = 121/197 (61.42%), Query Frame = 1


Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTTILTLAAALSLEDREVLAYLIS-SCSNDFTAVN 60
           MKKLYRK GTVHPSPPIISDHLSFLP TILTL AALS EDREVLAYLIS S SN+    N
Sbjct: 1   MKKLYRK-GTVHPSPPIISDHLSFLPATILTLTAALSPEDREVLAYLISCSSSNNILCSN 60

Query: 61  NSSSHRGKTVHQKPSAAAKGGSDHSPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYE 120
            SSS+                +DH P F+CDCFRCY SYW+RWDSSPNRQLIHEIIDA+E
Sbjct: 61  CSSSN----------------NDHPPMFNCDCFRCYMSYWIRWDSSPNRQLIHEIIDAFE 120

Query: 121 EKL-----AEIKAGKKNKKERKKRNSRPVSGPGEGKGSEPAAKEEELRV----------- 180
           + L     +   +GKKNKK+RK++        G  +GS    K  ELR+           
Sbjct: 121 DWLLKQGKSSSSSGKKNKKDRKRK--------GNSQGSGELIKRVELRMKHRMDESNSVD 172

[Close]

BLAST of ClCG01G009950 vs. TrEMBL
Match: W9QUM1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013616 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-41
Identity = 103/192 (53.65%), Postives = 120/192 (62.50%), Query Frame = 1


Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTTILTLAAALSLEDREVLAYLISSCSNDFTAVNN 60
           MKKLYRK GTVHPSPPIISDHL+FLP TILTL AALS EDREVLAYLIS  +++      
Sbjct: 1   MKKLYRK-GTVHPSPPIISDHLAFLPATILTLTAALSPEDREVLAYLISFSASNSPGGTT 60

Query: 61  SSSHRGKTVHQKPSAAAKGGS---------DHSPAFSCDCFRCYTSYWVRWDSSPNRQLI 120
           +SS R       P   AKGGS         DH P F+CDCFRCYTSYWVRW SSPNR+LI
Sbjct: 61  ASSRRAAAA-VAPKGGAKGGSCSGSSSASGDHPPQFNCDCFRCYTSYWVRWGSSPNRELI 120

Query: 121 HEIIDAYEEKLAEIK---AGKKNKKERKK-RNSRPVSGPGEGKGSEPAAKEEELRVTERE 180
           HEIIDA+E++L   +   A K  K+ER+K RN     G G   GS    + E     +  
Sbjct: 121 HEIIDAFEDELLLSRTKGAAKTTKRERRKQRNGGGNIGNGVNTGSGELKRSELSSGKDEP 180

[Close]

BLAST of ClCG01G009950 vs. TAIR10
Match: AT1G12020.1 (AT1G12020.1 unknown protein)

HSP 1 Score: 151.8 bits (382), Expect = 4.4e-37
Identity = 87/150 (58.00%), Postives = 102/150 (68.00%), Query Frame = 1


Query: 1   MKKLYRKRGTVHPSPPII--SDHL-SFLPTTILTLAAALSLEDREVLAYLISSCSNDFTA 60
           MKKLYRK GTVHPSPP I  +DHL + LP  I +LAA LS EDREVLAYLIS+ S  ++ 
Sbjct: 1   MKKLYRK-GTVHPSPPQIKSNDHLLTLLPVAIFSLAAVLSPEDREVLAYLISTAS--YSG 60

Query: 61  VNNSSSHRGKTVHQKPSAAAKGGSDHSPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDA 120
             N +S   KT   K +       +HSP F CDCF CYTSYWVRWDSSP+RQLIHEIIDA
Sbjct: 61  ERNPTSRLNKTKAHKKALF----DNHSPLFHCDCFSCYTSYWVRWDSSPSRQLIHEIIDA 120

Query: 121 YEEKLAEIKAGKKN---KKERKKRNSRPVS 145
           +E+ L + K  KKN   KK+R+KR+ +  S
Sbjct: 121 FEDSLEKNKNKKKNVTGKKDRRKRSGKSSS 143

[Close]

BLAST of ClCG01G009950 vs. TAIR10
Match: AT1G62422.1 (AT1G62422.1 unknown protein)

HSP 1 Score: 148.7 bits (374), Expect = 3.7e-36
Identity = 96/195 (49.23%), Postives = 116/195 (59.49%), Query Frame = 1


Query: 1   MKKLYRKRGTVHPSPP--IISDH--LSFLPTTILTLAAALSLEDREVLAYLISSCSNDFT 60
           MKKL RK GTVHPSPP  I +D   LS LP  IL+L AALS+EDREVLAYLIS       
Sbjct: 1   MKKLCRK-GTVHPSPPPAIKTDEQFLSLLPVAILSLVAALSVEDREVLAYLIS------- 60

Query: 61  AVNNSSSHRGKTVHQKPSAAAKGGSDHSPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIID 120
             N+  S+R   + +      K  + HSP F CDCF CYTSYWVRWD+SP RQLIHEIID
Sbjct: 61  --NSGDSNRISRLKKN-----KEDNHHSPLFLCDCFSCYTSYWVRWDTSPRRQLIHEIID 120

Query: 121 AYEEKLAEIKAGKKNKKERKKRNSRPVSGPGEGKGSEPAAKEEELRVTEREA---AEGGE 180
           AYE+ L E+K  KK++++R  + S  V+  G  + SE  +   E    + E      G E
Sbjct: 121 AYEDSL-EMKKKKKDRRKRSGKASGRVNSIGTSRLSELGSSSAEFAGGDSEKDGNCGGEE 179

Query: 181 VEAEKGAKIKVLRSI 189
            E EKG+  KV+  I
Sbjct: 181 AEKEKGSVGKVMSFI 179

[Close]

BLAST of ClCG01G009950 vs. TAIR10
Match: AT5G13090.1 (AT5G13090.1 unknown protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.6e-26
Identity = 70/180 (38.89%), Postives = 95/180 (52.78%), Query Frame = 1


Query: 6   RKRGTVHPSPP---------IISDHLS-----------FLPTTILTLAAALSLEDREVLA 65
           +K+G V+PSPP           S+HL+            LP TIL L + LS E+REVLA
Sbjct: 4   KKKGKVYPSPPPPPQSSSSSSSSNHLNEEDDDSLSVLKLLPATILVLVSVLSSEEREVLA 63

Query: 66  YLISSCSNDFTAVNNSSSHRGKTVHQKPSAAAKGGSDHSPAFSCDCFRCYTSYWVRWDSS 125
           YLI+  +      N+SS ++ K    K S   K      P F C+CF CYT+YW RWDSS
Sbjct: 64  YLITRGTTISDRGNSSSKNKTKKKSNKSSKNHK-----PPVFDCECFDCYTNYWFRWDSS 123

Query: 126 PNRQLIHEIIDAYEEKLAEIKAGKKNKKERKKRNSRPVSGPGEGKGSEPAAKEEELRVTE 166
           PNR+LIHEII+A+E    E  +  ++K +R K+  +P      G+    +  +  LRVT+
Sbjct: 124 PNRELIHEIIEAFENHHGEENSASRSKSKRGKKKEKP------GRRVTDSDSKPALRVTD 172

[Close]

BLAST of ClCG01G009950 vs. TAIR10
Match: AT1G24270.1 (AT1G24270.1 unknown protein)

HSP 1 Score: 99.4 bits (246), Expect = 2.6e-21
Identity = 64/146 (43.84%), Postives = 76/146 (52.05%), Query Frame = 1


Query: 7   KRGTVHPSPPIIS-------DHLS---FLPTTILTLAAALSLEDREVLAYLISSCSNDFT 66
           K+G VHPSPP+ S       D LS    L + IL L + LS ED EVLAYLI+   N   
Sbjct: 59  KKGKVHPSPPLPSSSSSNGDDSLSVFKLLQSAILVLVSVLSAEDLEVLAYLITRSLNTTN 118

Query: 67  AVNNSSSHRGKTVHQKPSAAAKGGSDHSPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIID 126
            V+                  K  S  +P   C CF CYTSYW +WDSS NR+LI++II+
Sbjct: 119 VVS----------------CKKKRSHKAPLLDCQCFDCYTSYWSKWDSSSNRELINQIIE 178

Query: 127 AYEEKLA--EIKA---GKKNKKERKK 138
           A+E+ L   EI A    KKNKK  KK
Sbjct: 179 AFEDHLTRDEISASHTSKKNKKRAKK 188

[Close]

BLAST of ClCG01G009950 vs. NCBI nr
Match: gi|449465415|ref|XP_004150423.1| (PREDICTED: uncharacterized protein LOC101221021 [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 1.5e-79
Identity = 156/180 (86.67%), Postives = 158/180 (87.78%), Query Frame = 1


Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTTILTLAAALSLEDREVLAYLISSCSNDFTAVNN 60
           MKKLYRKRGTVHPSP IISDHLSFLPT ILTLAAALSL DREVLAYLISSCSNDFTAV N
Sbjct: 1   MKKLYRKRGTVHPSPLIISDHLSFLPTVILTLAAALSLHDREVLAYLISSCSNDFTAVIN 60

Query: 61  SSSHRGKTVHQKPSAAAKGGSDHSPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE 120
           SSSHRGK  HQK  AAA GG DH PAFSC CF+CYTSYWVRWDSSPNRQLIHEIIDAYEE
Sbjct: 61  SSSHRGKATHQK-HAAAMGGLDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYEE 120

Query: 121 KLAEIKAGKKNKKERKKRNSR-PVSGPGEGKGSEPAAKEEELRVTEREAAEGGEVEAEKG 180
           KLAE K GK NKKERKKRN+R PVSGPGEGKGSE A KEEE RVTERE AEGGE  AEKG
Sbjct: 121 KLAESKVGKNNKKERKKRNNRGPVSGPGEGKGSEAATKEEEWRVTEREVAEGGEEGAEKG 179

[Close]

BLAST of ClCG01G009950 vs. NCBI nr
Match: gi|700209988|gb|KGN65084.1| (hypothetical protein Csa_1G196260 [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 1.5e-79
Identity = 156/180 (86.67%), Postives = 158/180 (87.78%), Query Frame = 1


Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTTILTLAAALSLEDREVLAYLISSCSNDFTAVNN 60
           MKKLYRKRGTVHPSP IISDHLSFLPT ILTLAAALSL DREVLAYLISSCSNDFTAV N
Sbjct: 124 MKKLYRKRGTVHPSPLIISDHLSFLPTVILTLAAALSLHDREVLAYLISSCSNDFTAVIN 183

Query: 61  SSSHRGKTVHQKPSAAAKGGSDHSPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE 120
           SSSHRGK  HQK  AAA GG DH PAFSC CF+CYTSYWVRWDSSPNRQLIHEIIDAYEE
Sbjct: 184 SSSHRGKATHQK-HAAAMGGLDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYEE 243

Query: 121 KLAEIKAGKKNKKERKKRNSR-PVSGPGEGKGSEPAAKEEELRVTEREAAEGGEVEAEKG 180
           KLAE K GK NKKERKKRN+R PVSGPGEGKGSE A KEEE RVTERE AEGGE  AEKG
Sbjct: 244 KLAESKVGKNNKKERKKRNNRGPVSGPGEGKGSEAATKEEEWRVTEREVAEGGEEGAEKG 302

[Close]

BLAST of ClCG01G009950 vs. NCBI nr
Match: gi|659118162|ref|XP_008458978.1| (PREDICTED: uncharacterized protein LOC103498228 [Cucumis melo])

HSP 1 Score: 278.9 bits (712), Expect = 6.7e-72
Identity = 142/180 (78.89%), Postives = 152/180 (84.44%), Query Frame = 1


Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTTILTLAAALSLEDREVLAYLISSCSNDFTAVNN 60
           MKKLYRK GTVHPSPP+ISDHLSFLPT ILTL++ALSL+DREVLAYLISSCSNDFT V+N
Sbjct: 1   MKKLYRKTGTVHPSPPLISDHLSFLPTAILTLSSALSLQDREVLAYLISSCSNDFTPVHN 60

Query: 61  SSSHRGKTVHQKPSAAAKGGSDHSPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYEE 120
           SS+HRGK  H K  AA   GSDH PAFSC CF+CYTSYWVRWDSSPNRQLIHEIIDAYE+
Sbjct: 61  SSTHRGKAAHHK-HAAPMAGSDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYED 120

Query: 121 KLAEIKAGKKNKKERKKRNSR-PVSGPGEGKGSEPAAKEEELRVTEREAAEGGEVEAEKG 180
           KLAE K GK NKKERKKRNS   VSGPGEGKG+E AAK EE +VT     EGGE EAEKG
Sbjct: 121 KLAETKVGKNNKKERKKRNSSGTVSGPGEGKGAEAAAKVEEWKVT-----EGGEEEAEKG 174

[Close]

BLAST of ClCG01G009950 vs. NCBI nr
Match: gi|657958961|ref|XP_008371025.1| (PREDICTED: uncharacterized protein LOC103434446 [Malus domestica])

HSP 1 Score: 193.7 bits (491), Expect = 2.9e-46
Identity = 116/210 (55.24%), Postives = 139/210 (66.19%), Query Frame = 1


Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTTILTLAAALSLEDREVLAYLISSCSNDFTAVNN 60
           MKKLYR RGTVHPSPPIISDHL+FLP TILTLA+ALS EDREVLAYLIS CSN    +++
Sbjct: 1   MKKLYR-RGTVHPSPPIISDHLAFLPATILTLASALSPEDREVLAYLIS-CSNSSVNLSS 60

Query: 61  SSSH-----RGKTVHQKPSAAAKG-------GSDHSPAFSCDCFRCYTSYWVRWDSSPNR 120
           SSS+     +  T   K +AAAKG       G DH   F+C+CFRCYTSYWVRWD SPNR
Sbjct: 61  SSSYAAPRKKTTTAASKKTAAAKGVIGGGGVGGDHPARFNCNCFRCYTSYWVRWDESPNR 120

Query: 121 QLIHEIIDAYEEKLAEIKAGKKNKKERKKR--NSRPVSGPGEGKGSEPAAKEEEL---RV 180
           QLIHEIIDA+E++L     G  +K  RK+R   SR  +G GE K SE + K++EL     
Sbjct: 121 QLIHEIIDAFEDELLTESKGFSSKSSRKERRNKSRVNNGSGELKRSELSVKKKELAQSHT 180

Query: 181 TEREA-----AEGGEVEAEKGAKIKVLRSI 189
            ++EA       GGEV+ E   K  V R +
Sbjct: 181 ADQEAGGGGGGGGGEVDEEDSEKGSVRRFV 208

[Close]

BLAST of ClCG01G009950 vs. NCBI nr
Match: gi|694309108|ref|XP_009355088.1| (PREDICTED: uncharacterized protein LOC103946140 [Pyrus x bretschneideri])

HSP 1 Score: 193.4 bits (490), Expect = 3.7e-46
Identity = 119/214 (55.61%), Postives = 140/214 (65.42%), Query Frame = 1


Query: 1   MKKLYRKRGTVHPSPPIISDHLSFLPTTILTLAAALSLEDREVLAYLISSCSNDFTAVNN 60
           MKKLYRK GTVHPSPPIISDHL+FLP TILTLAAALS EDREVLAYLIS CSN    +++
Sbjct: 1   MKKLYRK-GTVHPSPPIISDHLAFLPATILTLAAALSPEDREVLAYLIS-CSNSSVNLSS 60

Query: 61  SSSH---RGKT--VHQKPSAAAKGG-------SDHSPAFSCDCFRCYTSYWVRWDSSPNR 120
           SSS+   R KT     K +AAAKGG        DH   F+C+CFRCYTSYWVRWD SPNR
Sbjct: 61  SSSYAPPRNKTSAAASKKTAAAKGGIGSGGVGGDHLARFNCNCFRCYTSYWVRWDESPNR 120

Query: 121 QLIHEIIDAYEEKLAEIKAGKKNKKERKKR--NSRPVSGPGEGKGSEPAAKEEEL---RV 180
           QLIHEIIDA+E+ L     G  +K  RK+R   SR  +G GE K SE + K++EL     
Sbjct: 121 QLIHEIIDAFEDVLLTESKGFSSKSSRKERRNKSRVNNGSGELKRSELSVKKKELAQSHT 180

Query: 181 TEREAAE---------GGEVEAEKGAKIKVLRSI 189
            ++EA +         GGEV+ E   K  V R +
Sbjct: 181 ADQEAGDGDGGGGGDGGGEVDEEDSEKGSVRRFV 212

The following BLAST results are available for this feature:

BLAST of ClCG01G009950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVV3_CUCSA	1.0e-79	86.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G196260 PE=4 SV=1	[more]
A0A061GHH2_THECC	1.1e-44	59.55	Uncharacterized protein OS=Theobroma cacao GN=TCM_030338 PE=4 SV=1	[more]
A0A0D2TLX7_GOSRA	3.0e-42	56.76	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G181900 PE=4 SV=1	[more]
B9HZI9_POPTR	6.6e-42	54.31	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s00770g PE=4 SV=1	[more]
W9QUM1_9ROSA	1.1e-41	53.65	Uncharacterized protein OS=Morus notabilis GN=L484_013616 PE=4 SV=1	[more]

BLAST of ClCG01G009950 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12020.1	4.4e-37	58.00	unknown protein	[more]
AT1G62422.1	3.7e-36	49.23	unknown protein	[more]
AT5G13090.1	1.6e-26	38.89	unknown protein	[more]
AT1G24270.1	2.6e-21	43.84	unknown protein	[more]

BLAST of ClCG01G009950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449465415\|ref\|XP_004150423.1\|	1.5e-79	86.67	PREDICTED: uncharacterized protein LOC101221021 [Cucumis sativus]	[more]
gi\|700209988\|gb\|KGN65084.1\|	1.5e-79	86.67	hypothetical protein Csa_1G196260 [Cucumis sativus]	[more]
gi\|659118162\|ref\|XP_008458978.1\|	6.7e-72	78.89	PREDICTED: uncharacterized protein LOC103498228 [Cucumis melo]	[more]
gi\|657958961\|ref\|XP_008371025.1\|	2.9e-46	55.24	PREDICTED: uncharacterized protein LOC103434446 [Malus domestica]	[more]
gi\|694309108\|ref\|XP_009355088.1\|	3.7e-46	55.61	PREDICTED: uncharacterized protein LOC103946140 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G009950.1	ClCG01G009950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 115..135 scor
None	No IPR available	PANTHER	PTHR31903	FAMILY NOT NAMED	coord: 1..179 score: 6.2
None	No IPR available	PANTHER	PTHR31903:SF5	SUBFAMILY NOT NAMED	coord: 1..179 score: 6.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G009950	Csa1G196260	Cucumber (Chinese Long) v2	cuwcgB022
ClCG01G009950	MELO3C021703	Melon (DHL92) v3.5.1	mewcgB140
ClCG01G009950	Cla008974	Watermelon (97103) v1	wcgwmB146
ClCG01G009950	Cla97C01G010060	Watermelon (97103) v2	wcgwmbB089
ClCG01G009950	Bhi08G000667	Wax gourd	wcgwgoB233
ClCG01G009950	CSPI01G16230	Wild cucumber (PI 183967)	cpiwcgB025
ClCG01G009950	CmaCh13G004070	Cucurbita maxima (Rimu)	cmawcgB186
ClCG01G009950	CmoCh18G005650	Cucurbita moschata (Rifu)	cmowcgB340
ClCG01G009950	CmoCh13G004310	Cucurbita moschata (Rifu)	cmowcgB177
ClCG01G009950	Lsi02G010880	Bottle gourd (USVL1VR-Ls)	lsiwcgB169
ClCG01G009950	Cp4.1LG20g06400	Cucurbita pepo (Zucchini)	cpewcgB451
ClCG01G009950	Cp4.1LG02g09480	Cucurbita pepo (Zucchini)	cpewcgB496
ClCG01G009950	CsGy1G015820	Cucumber (Gy14) v2	cgybwcgB021
ClCG01G009950	MELO3C021703.2	Melon (DHL92) v3.6.1	medwcgB132
ClCG01G009950	Carg25135	Silver-seed gourd	carwcgB1012
ClCG01G009950	CsaV3_1G018460	Cucumber (Chinese Long) v3	cucwcgB024

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G009950	Cucurbita maxima (Rimu)	cmawcgB342
ClCG01G009950	Cucurbita maxima (Rimu)	cmawcgB350