CmaCh13G004070 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh13G004070
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_12
Location	Cma_Chr13 : 4612575 .. 4613186 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAAGCTCTACCGGAGAAGAGGAACGGTCCACCCATCGCCGCCGATCATCTCCGACCATCTCTCCTTTCTCCCCACTGCCATCCTCACCCTCGCGGCGGCGCTTTCACCGGAGGATCGAGAGATCTTAGCCTACCTCATCTCCTCCTTCTCCAACGACTTCACCACCGTCAACAACTTCTCCGGCCACCGCGGCAAGGCGGCCCAACAGAAACCCGCCGCCGCAAAGAGCGGTTCCGATCACCCTCCAGCTTTCTCCTGCGACTGTTTCCGGTGCTACACCAGCTACTGGGTGAGATGGGATTCCTCTCCAAATCGGCAAATCATTCACGAAATAATCGACGCTTATGAAGAAACATTGGCTGAGAGCAAAGCCGGCAAGAACAATAAGAAAGAAAGGAAGAAGAGGAACACCGGGTCCGGATCCGGGTCGGTTTCCAGTCAGGGTGATGGGAAGGGATCCGAACTCGCCCCGAAGGTAGAAGAGTCGAGGGTGACGGAGATGGAGGCGGCGGATGGCGGCGGAGGCGGTGAGAATGAGGCGGAGAAAGGAACGGTGAGGTGGATTGTGAGGTACATAGGGGAAAAAATCTGGGGAGGTTGGAATTAG

mRNA sequence

ATGAACAAGCTCTACCGGAGAAGAGGAACGGTCCACCCATCGCCGCCGATCATCTCCGACCATCTCTCCTTTCTCCCCACTGCCATCCTCACCCTCGCGGCGGCGCTTTCACCGGAGGATCGAGAGATCTTAGCCTACCTCATCTCCTCCTTCTCCAACGACTTCACCACCGTCAACAACTTCTCCGGCCACCGCGGCAAGGCGGCCCAACAGAAACCCGCCGCCGCAAAGAGCGGTTCCGATCACCCTCCAGCTTTCTCCTGCGACTGTTTCCGGTGCTACACCAGCTACTGGGTGAGATGGGATTCCTCTCCAAATCGGCAAATCATTCACGAAATAATCGACGCTTATGAAGAAACATTGGCTGAGAGCAAAGCCGGCAAGAACAATAAGAAAGAAAGGAAGAAGAGGAACACCGGGTCCGGATCCGGGTCGGTTTCCAGTCAGGGTGATGGGAAGGGATCCGAACTCGCCCCGAAGGTAGAAGAGTCGAGGGTGACGGAGATGGAGGCGGCGGATGGCGGCGGAGGCGGTGAGAATGAGGCGGAGAAAGGAACGGTGAGGTGGATTGTGAGGTACATAGGGGAAAAAATCTGGGGAGGTTGGAATTAG

Coding sequence (CDS)

ATGAACAAGCTCTACCGGAGAAGAGGAACGGTCCACCCATCGCCGCCGATCATCTCCGACCATCTCTCCTTTCTCCCCACTGCCATCCTCACCCTCGCGGCGGCGCTTTCACCGGAGGATCGAGAGATCTTAGCCTACCTCATCTCCTCCTTCTCCAACGACTTCACCACCGTCAACAACTTCTCCGGCCACCGCGGCAAGGCGGCCCAACAGAAACCCGCCGCCGCAAAGAGCGGTTCCGATCACCCTCCAGCTTTCTCCTGCGACTGTTTCCGGTGCTACACCAGCTACTGGGTGAGATGGGATTCCTCTCCAAATCGGCAAATCATTCACGAAATAATCGACGCTTATGAAGAAACATTGGCTGAGAGCAAAGCCGGCAAGAACAATAAGAAAGAAAGGAAGAAGAGGAACACCGGGTCCGGATCCGGGTCGGTTTCCAGTCAGGGTGATGGGAAGGGATCCGAACTCGCCCCGAAGGTAGAAGAGTCGAGGGTGACGGAGATGGAGGCGGCGGATGGCGGCGGAGGCGGTGAGAATGAGGCGGAGAAAGGAACGGTGAGGTGGATTGTGAGGTACATAGGGGAAAAAATCTGGGGAGGTTGGAATTAG

Protein sequence

MNKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNNFSGHRGKAAQQKPAAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEIIDAYEETLAESKAGKNNKKERKKRNTGSGSGSVSSQGDGKGSELAPKVEESRVTEMEAADGGGGGENEAEKGTVRWIVRYIGEKIWGGWN

Homology

[Close]

BLAST of CmaCh13G004070 vs. TrEMBL
Match: A0A0A0LVV3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G196260 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 6.3e-75
Identity = 153/203 (75.37%), Postives = 160/203 (78.82%), Query Frame = 1


Query: 1   MNKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           M KLYR+RGTVHPSP IISDHLSFLPT ILTLAAALS  DRE+LAYLISS SNDFT V N
Sbjct: 124 MKKLYRKRGTVHPSPLIISDHLSFLPTVILTLAAALSLHDREVLAYLISSCSNDFTAVIN 183

Query: 61  FSGHRGKAAQQKPAAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEIIDAYEET 120
            S HRGKA  QK AAA  G DHPPAFSC CF+CYTSYWVRWDSSPNRQ+IHEIIDAYEE 
Sbjct: 184 SSSHRGKATHQKHAAAMGGLDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYEEK 243

Query: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSQGDGKGSELAPKVEESRVTEMEAADGGGGGEN 180
           LAESK GKNNKKERKKRN     G VS  G+GKGSE A K EE RVTE E A+   GGE 
Sbjct: 244 LAESKVGKNNKKERKKRNN---RGPVSGPGEGKGSEAATKEEEWRVTEREVAE---GGEE 303

Query: 181 EAEKGTVRWIVRYIGEKIWGGWN 204
            AEKG VR IV  +GEKIWG WN
Sbjct: 304 GAEKGPVRRIVSLLGEKIWGSWN 320

[Close]

BLAST of CmaCh13G004070 vs. TrEMBL
Match: A0A061GHH2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_030338 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.2e-49
Identity = 118/212 (55.66%), Postives = 139/212 (65.57%), Query Frame = 1


Query: 1   MNKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           M KLYR RGTVHPSPPI +DHLSFLP  ILTLAAALSP+DRE+LAYLIS  +NDF    N
Sbjct: 1   MKKLYR-RGTVHPSPPITTDHLSFLPATILTLAAALSPDDREVLAYLISCSNNDF---GN 60

Query: 61  FSGHR---GKAAQQKPAAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEIIDAY 120
           FS HR    K   ++  ++ S  DHPP F+CDCFRCY SYWVRWDSSPNRQ+IHEIIDA+
Sbjct: 61  FSSHRKNTHKNPTKRSISSSSDHDHPPLFTCDCFRCYMSYWVRWDSSPNRQLIHEIIDAF 120

Query: 121 EETLAESKAGKNNKKERKKRNTGSGSGSVS----SQGDGKGSELAPKVEESRVTEMEAAD 180
           E+ LA+SK  K+ K  +KK     GSG +     S      SEL   VEES  +    + 
Sbjct: 121 EDGLAQSKKAKSKKDRKKKGGGADGSGGLKRPELSLRKDDSSEL-KSVEESTSSSSIGSS 180

Query: 181 G---GGGGENEAEKGTVRWIVRYIGEKIWGGW 203
           G      GE   EKG+VR  V +IGE+IW  W
Sbjct: 181 GEVCADDGEEGTEKGSVRSFVNFIGERIWNVW 207

[Close]

BLAST of CmaCh13G004070 vs. TrEMBL
Match: W9QUM1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013616 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.1e-48
Identity = 116/223 (52.02%), Postives = 144/223 (64.57%), Query Frame = 1


Query: 1   MNKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           M KLYR+ GTVHPSPPIISDHL+FLP  ILTL AALSPEDRE+LAYLIS  +++      
Sbjct: 1   MKKLYRK-GTVHPSPPIISDHLAFLPATILTLTAALSPEDREVLAYLISFSASNSPGGTT 60

Query: 61  FSGHRGKAAQQKPAAAKSGS---------DHPPAFSCDCFRCYTSYWVRWDSSPNRQIIH 120
            S  R  AA      AK GS         DHPP F+CDCFRCYTSYWVRW SSPNR++IH
Sbjct: 61  ASSRRAAAAVAPKGGAKGGSCSGSSSASGDHPPQFNCDCFRCYTSYWVRWGSSPNRELIH 120

Query: 121 EIIDAYEETLAESK---AGKNNKKERKKRNTGS---GSGSVSSQGDGKGSELAPKVEE-- 180
           EIIDA+E+ L  S+   A K  K+ER+K+  G    G+G  +  G+ K SEL+   +E  
Sbjct: 121 EIIDAFEDELLLSRTKGAAKTTKRERRKQRNGGGNIGNGVNTGSGELKRSELSSGKDEPA 180

Query: 181 SRVTEMEAADGGGGGENE------AEKGTVRWIVRYIGEKIWG 201
                ++  +GGGGGE +      +EKG+VR  V +IGE+IWG
Sbjct: 181 GESESVQGHEGGGGGEGDEEEVLSSEKGSVRRFVSFIGERIWG 222

[Close]

BLAST of CmaCh13G004070 vs. TrEMBL
Match: A0A0D2VC35_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G185700 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 6.6e-48
Identity = 112/210 (53.33%), Postives = 141/210 (67.14%), Query Frame = 1


Query: 1   MNKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           M KLYRR G VHPSP I +DHLSFLP  ILTL+AALSPED+++LAYLIS  +NDF    N
Sbjct: 1   MKKLYRR-GMVHPSPSITTDHLSFLPATILTLSAALSPEDKQVLAYLISCSNNDF---GN 60

Query: 61  FSGHRGKAAQQKP----AAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEIIDA 120
           FSG R    + +     +++ S  DHPP F+CDCFRCY SYWVRWDSSPNRQ+IHEIIDA
Sbjct: 61  FSGRRKNTPKPQTKRSFSSSSSDHDHPPLFTCDCFRCYMSYWVRWDSSPNRQLIHEIIDA 120

Query: 121 YEETLAESKAGKNNKKERKKRNTGSGSGSVSSQGD---GKGSELAPKVEESRVTEMEAAD 180
           +E+ +A+SK  K +KKERKK+   +G    S + D    KG     K  E     ++  +
Sbjct: 121 FEDEVAQSKKTK-SKKERKKKGGVTGGSCSSKRPDLSLRKGDSGELKTVEQSSNSVDGGN 180

Query: 181 GGG-GGENEAEKGTVRWIVRYIGEKIWGGW 203
           GGG  G+   EKG+VR +V +IGE+IW  W
Sbjct: 181 GGGDDGQEGIEKGSVRGLVSFIGERIWNVW 205

[Close]

BLAST of CmaCh13G004070 vs. TrEMBL
Match: B9HZI9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s00770g PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-46
Identity = 114/217 (52.53%), Postives = 142/217 (65.44%), Query Frame = 1


Query: 1   MNKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           M KLYR+ GTVHPSPPIISDHLSFLP  ILTL AALSPEDRE+LAYLIS  S++    +N
Sbjct: 1   MKKLYRK-GTVHPSPPIISDHLSFLPATILTLTAALSPEDREVLAYLISCSSSNNILCSN 60

Query: 61  FSGHRGKAAQQKPAAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEIIDAYEET 120
            S               S +DHPP F+CDCFRCY SYW+RWDSSPNRQ+IHEIIDA+E+ 
Sbjct: 61  CSS--------------SNNDHPPMFNCDCFRCYMSYWIRWDSSPNRQLIHEIIDAFEDW 120

Query: 121 L-----AESKAGKNNKKERKKRNTGSGSGSVSSQGDGK---GSELAPKVEESR------- 180
           L     + S +GK NKK+RK++    GSG +  + + +     + +  V+E+R       
Sbjct: 121 LLKQGKSSSSSGKKNKKDRKRKGNSQGSGELIKRVELRMKHRMDESNSVDENRSGGGGGE 180

Query: 181 VTEMEAADGGGG-GENE-AEKGTVRWIVRYIGEKIWG 201
           V    AA GGGG GE E  +KG+VR  V +IGE+IWG
Sbjct: 181 VAAAAAAGGGGGCGEEEVTDKGSVRRFVSFIGERIWG 202

[Close]

BLAST of CmaCh13G004070 vs. TAIR10
Match: AT1G12020.1 (AT1G12020.1 unknown protein)

HSP 1 Score: 163.3 bits (412), Expect = 1.6e-40
Identity = 112/234 (47.86%), Postives = 139/234 (59.40%), Query Frame = 1


Query: 1   MNKLYRRRGTVHPSPPII--SDHL-SFLPTAILTLAAALSPEDREILAYLISSFSNDFTT 60
           M KLYR+ GTVHPSPP I  +DHL + LP AI +LAA LSPEDRE+LAYLIS+ S     
Sbjct: 1   MKKLYRK-GTVHPSPPQIKSNDHLLTLLPVAIFSLAAVLSPEDREVLAYLISTAS----- 60

Query: 61  VNNFSGHRGKAAQ-QKPAAAKSG--SDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEII 120
              +SG R   ++  K  A K     +H P F CDCF CYTSYWVRWDSSP+RQ+IHEII
Sbjct: 61  ---YSGERNPTSRLNKTKAHKKALFDNHSPLFHCDCFSCYTSYWVRWDSSPSRQLIHEII 120

Query: 121 DAYEETLAESKAGKNN---KKERKKRNTGSGSGSVSSQGDGKGSELAPKVEESRVTEMEA 180
           DA+E++L ++K  K N   KK+R+KR+  S S   SS      SE+  ++ ES V     
Sbjct: 121 DAFEDSLEKNKNKKKNVTGKKDRRKRSGKSSSLLASSSFSTDDSEIPSRLGESVVNSCPC 180

Query: 181 A-------DGGG--GG--------------ENEAEKGTVRWIVRYIGEKIWGGW 203
                   DGGG  GG              + E EKGTVR  V +IGEK++G W
Sbjct: 181 TSSSELTQDGGGCSGGLEPMEFFCAGDACEKVEEEKGTVRRFVSFIGEKVFGVW 225

[Close]

BLAST of CmaCh13G004070 vs. TAIR10
Match: AT1G62422.1 (AT1G62422.1 unknown protein)

HSP 1 Score: 152.9 bits (385), Expect = 2.1e-37
Identity = 97/200 (48.50%), Postives = 122/200 (61.00%), Query Frame = 1


Query: 7   RRGTVHPSPP--IISDH--LSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNNFS 66
           R+GTVHPSPP  I +D   LS LP AIL+L AALS EDRE+LAYLIS+           S
Sbjct: 6   RKGTVHPSPPPAIKTDEQFLSLLPVAILSLVAALSVEDREVLAYLISN-----------S 65

Query: 67  GHRGKAAQQKPAAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEIIDAYEETLA 126
           G   + ++ K    K  + H P F CDCF CYTSYWVRWD+SP RQ+IHEIIDAYE++L 
Sbjct: 66  GDSNRISRLKKN--KEDNHHSPLFLCDCFSCYTSYWVRWDTSPRRQLIHEIIDAYEDSLE 125

Query: 127 ESKAGKNNKKERKKRNTGSGSGSVSSQGDGKGSELAPKVEESRVTEMEAADGGGGGENEA 186
                K  KK+R+KR +G  SG V+S G  + SEL     E    + E     GG E E 
Sbjct: 126 M----KKKKKDRRKR-SGKASGRVNSIGTSRLSELGSSSAEFAGGDSEKDGNCGGEEAEK 185

Query: 187 EKGTVRWIVRYIGEKIWGGW 203
           EKG+V  ++ +IG++  G W
Sbjct: 186 EKGSVGKVMSFIGQRFLGVW 187

[Close]

BLAST of CmaCh13G004070 vs. TAIR10
Match: AT5G13090.1 (AT5G13090.1 unknown protein)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-22
Identity = 70/193 (36.27%), Postives = 103/193 (53.37%), Query Frame = 1


Query: 6   RRRGTVHPSPP---------IISDHLS-----------FLPTAILTLAAALSPEDREILA 65
           +++G V+PSPP           S+HL+            LP  IL L + LS E+RE+LA
Sbjct: 4   KKKGKVYPSPPPPPQSSSSSSSSNHLNEEDDDSLSVLKLLPATILVLVSVLSSEEREVLA 63

Query: 66  YLISSFSNDFTTVNNFSGHRGKAAQQKPAAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSP 125
           YLI+      TT+++      K   +K +   S +  PP F C+CF CYT+YW RWDSSP
Sbjct: 64  YLITRG----TTISDRGNSSSKNKTKKKSNKSSKNHKPPVFDCECFDCYTNYWFRWDSSP 123

Query: 126 NRQIIHEIIDAY------EETLAESKAGKNNKKERK-KRNTGSGSG---SVSSQGDGKGS 169
           NR++IHEII+A+      E + + SK+ +  KKE+  +R T S S     V+  GD    
Sbjct: 124 NRELIHEIIEAFENHHGEENSASRSKSKRGKKKEKPGRRVTDSDSKPALRVTDNGDKDSK 183

[Close]

BLAST of CmaCh13G004070 vs. TAIR10
Match: AT1G24270.1 (AT1G24270.1 unknown protein)

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-19
Identity = 59/145 (40.69%), Postives = 76/145 (52.41%), Query Frame = 1


Query: 7   RRGTVHPSPPIIS-------DHLS---FLPTAILTLAAALSPEDREILAYLISSFSNDFT 66
           ++G VHPSPP+ S       D LS    L +AIL L + LS ED E+LAYLI+   N   
Sbjct: 59  KKGKVHPSPPLPSSSSSNGDDSLSVFKLLQSAILVLVSVLSAEDLEVLAYLITRSLNTTN 118

Query: 67  TVNNFSGHRGKAAQQKPAAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEIIDA 126
            V+                 K  S   P   C CF CYTSYW +WDSS NR++I++II+A
Sbjct: 119 VVS---------------CKKKRSHKAPLLDCQCFDCYTSYWSKWDSSSNRELINQIIEA 178

Query: 127 YEETL-----AESKAGKNNKKERKK 137
           +E+ L     + S   K NKK  KK
Sbjct: 179 FEDHLTRDEISASHTSKKNKKRAKK 188

[Close]

BLAST of CmaCh13G004070 vs. NCBI nr
Match: gi|449465415|ref|XP_004150423.1| (PREDICTED: uncharacterized protein LOC101221021 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 9.1e-75
Identity = 153/203 (75.37%), Postives = 160/203 (78.82%), Query Frame = 1


Query: 1   MNKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           M KLYR+RGTVHPSP IISDHLSFLPT ILTLAAALS  DRE+LAYLISS SNDFT V N
Sbjct: 1   MKKLYRKRGTVHPSPLIISDHLSFLPTVILTLAAALSLHDREVLAYLISSCSNDFTAVIN 60

Query: 61  FSGHRGKAAQQKPAAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEIIDAYEET 120
            S HRGKA  QK AAA  G DHPPAFSC CF+CYTSYWVRWDSSPNRQ+IHEIIDAYEE 
Sbjct: 61  SSSHRGKATHQKHAAAMGGLDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYEEK 120

Query: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSQGDGKGSELAPKVEESRVTEMEAADGGGGGEN 180
           LAESK GKNNKKERKKRN     G VS  G+GKGSE A K EE RVTE E A+   GGE 
Sbjct: 121 LAESKVGKNNKKERKKRNN---RGPVSGPGEGKGSEAATKEEEWRVTEREVAE---GGEE 180

Query: 181 EAEKGTVRWIVRYIGEKIWGGWN 204
            AEKG VR IV  +GEKIWG WN
Sbjct: 181 GAEKGPVRRIVSLLGEKIWGSWN 197

[Close]

BLAST of CmaCh13G004070 vs. NCBI nr
Match: gi|700209988|gb|KGN65084.1| (hypothetical protein Csa_1G196260 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 9.1e-75
Identity = 153/203 (75.37%), Postives = 160/203 (78.82%), Query Frame = 1


Query: 1   MNKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           M KLYR+RGTVHPSP IISDHLSFLPT ILTLAAALS  DRE+LAYLISS SNDFT V N
Sbjct: 124 MKKLYRKRGTVHPSPLIISDHLSFLPTVILTLAAALSLHDREVLAYLISSCSNDFTAVIN 183

Query: 61  FSGHRGKAAQQKPAAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEIIDAYEET 120
            S HRGKA  QK AAA  G DHPPAFSC CF+CYTSYWVRWDSSPNRQ+IHEIIDAYEE 
Sbjct: 184 SSSHRGKATHQKHAAAMGGLDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYEEK 243

Query: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSQGDGKGSELAPKVEESRVTEMEAADGGGGGEN 180
           LAESK GKNNKKERKKRN     G VS  G+GKGSE A K EE RVTE E A+   GGE 
Sbjct: 244 LAESKVGKNNKKERKKRNN---RGPVSGPGEGKGSEAATKEEEWRVTEREVAE---GGEE 303

Query: 181 EAEKGTVRWIVRYIGEKIWGGWN 204
            AEKG VR IV  +GEKIWG WN
Sbjct: 304 GAEKGPVRRIVSLLGEKIWGSWN 320

[Close]

BLAST of CmaCh13G004070 vs. NCBI nr
Match: gi|659118162|ref|XP_008458978.1| (PREDICTED: uncharacterized protein LOC103498228 [Cucumis melo])

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-74
Identity = 148/203 (72.91%), Postives = 166/203 (81.77%), Query Frame = 1


Query: 1   MNKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           M KLYR+ GTVHPSPP+ISDHLSFLPTAILTL++ALS +DRE+LAYLISS SNDFT V+N
Sbjct: 1   MKKLYRKTGTVHPSPPLISDHLSFLPTAILTLSSALSLQDREVLAYLISSCSNDFTPVHN 60

Query: 61  FSGHRGKAAQQKPAAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEIIDAYEET 120
            S HRGKAA  K AA  +GSDHPPAFSC CF+CYTSYWVRWDSSPNRQ+IHEIIDAYE+ 
Sbjct: 61  SSTHRGKAAHHKHAAPMAGSDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYEDK 120

Query: 121 LAESKAGKNNKKERKKRNTGSGSGSVSSQGDGKGSELAPKVEESRVTEMEAADGGGGGEN 180
           LAE+K GKNNKKERKKRN+   SG+VS  G+GKG+E A KVEE +VTE        GGE 
Sbjct: 121 LAETKVGKNNKKERKKRNS---SGTVSGPGEGKGAEAAAKVEEWKVTE--------GGEE 180

Query: 181 EAEKGTVRWIVRYIGEKIWGGWN 204
           EAEKG VR IV  +GEKIWG WN
Sbjct: 181 EAEKGPVRRIVSLLGEKIWGSWN 192

[Close]

BLAST of CmaCh13G004070 vs. NCBI nr
Match: gi|1009107203|ref|XP_015878402.1| (PREDICTED: uncharacterized protein LOC107414739 [Ziziphus jujuba])

HSP 1 Score: 216.1 bits (549), Expect = 5.7e-53
Identity = 124/220 (56.36%), Postives = 148/220 (67.27%), Query Frame = 1


Query: 1   MNKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLIS---------SF 60
           M KLYR+ GTVHPSPPIISDHLSFLP AILTL  ALSPEDRE+LAYLIS         S 
Sbjct: 1   MKKLYRK-GTVHPSPPIISDHLSFLPAAILTLTVALSPEDREVLAYLISCSNSAGVNSSS 60

Query: 61  SNDFTTVNNFSGHRGKAAQQKPAAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIH 120
           S    T     G  G A     +++  G DHPP F+C+CFRCYTS+WVRWDSSPNRQ+IH
Sbjct: 61  SGQRRTTQRSCGKGGVAGATSSSSSGGGGDHPPQFNCNCFRCYTSFWVRWDSSPNRQLIH 120

Query: 121 EIIDAYEE-TLAESKAGK--NNKKERKKRNTGSGSGSVSSQGDGKGSELAPKVE-----E 180
           EIIDA+E+  LA+SK  K  NN+KER+KR  G G G+ +  G+ K SEL+   +     E
Sbjct: 121 EIIDAFEDGLLAQSKGAKNNNNRKERRKRGGGGGGGN-NGSGELKRSELSSGKDELVESE 180

Query: 181 SRVTEMEAADGGGGGENEAEKGTVRWIVRYIGEKIWGGWN 204
           S V E  +  G G G+ EAEKG+VR  V +IGE+IWG WN
Sbjct: 181 SVVEETSSGGGDGVGDEEAEKGSVRRFVSFIGERIWGVWN 218

[Close]

BLAST of CmaCh13G004070 vs. NCBI nr
Match: gi|590626677|ref|XP_007026236.1| (Uncharacterized protein TCM_030338 [Theobroma cacao])

HSP 1 Score: 204.5 bits (519), Expect = 1.7e-49
Identity = 118/212 (55.66%), Postives = 139/212 (65.57%), Query Frame = 1


Query: 1   MNKLYRRRGTVHPSPPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVNN 60
           M KLYR RGTVHPSPPI +DHLSFLP  ILTLAAALSP+DRE+LAYLIS  +NDF    N
Sbjct: 1   MKKLYR-RGTVHPSPPITTDHLSFLPATILTLAAALSPDDREVLAYLISCSNNDF---GN 60

Query: 61  FSGHR---GKAAQQKPAAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEIIDAY 120
           FS HR    K   ++  ++ S  DHPP F+CDCFRCY SYWVRWDSSPNRQ+IHEIIDA+
Sbjct: 61  FSSHRKNTHKNPTKRSISSSSDHDHPPLFTCDCFRCYMSYWVRWDSSPNRQLIHEIIDAF 120

Query: 121 EETLAESKAGKNNKKERKKRNTGSGSGSVS----SQGDGKGSELAPKVEESRVTEMEAAD 180
           E+ LA+SK  K+ K  +KK     GSG +     S      SEL   VEES  +    + 
Sbjct: 121 EDGLAQSKKAKSKKDRKKKGGGADGSGGLKRPELSLRKDDSSEL-KSVEESTSSSSIGSS 180

Query: 181 G---GGGGENEAEKGTVRWIVRYIGEKIWGGW 203
           G      GE   EKG+VR  V +IGE+IW  W
Sbjct: 181 GEVCADDGEEGTEKGSVRSFVNFIGERIWNVW 207

The following BLAST results are available for this feature:

BLAST of CmaCh13G004070 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh13G004070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVV3_CUCSA	6.3e-75	75.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G196260 PE=4 SV=1	[more]
A0A061GHH2_THECC	1.2e-49	55.66	Uncharacterized protein OS=Theobroma cacao GN=TCM_030338 PE=4 SV=1	[more]
W9QUM1_9ROSA	5.1e-48	52.02	Uncharacterized protein OS=Morus notabilis GN=L484_013616 PE=4 SV=1	[more]
A0A0D2VC35_GOSRA	6.6e-48	53.33	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G185700 PE=4 SV=1	[more]
B9HZI9_POPTR	1.6e-46	52.53	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s00770g PE=4 SV=1	[more]

BLAST of CmaCh13G004070 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12020.1	1.6e-40	47.86	unknown protein	[more]
AT1G62422.1	2.1e-37	48.50	unknown protein	[more]
AT5G13090.1	1.1e-22	36.27	unknown protein	[more]
AT1G24270.1	2.0e-19	40.69	unknown protein	[more]

BLAST of CmaCh13G004070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449465415\|ref\|XP_004150423.1\|	9.1e-75	75.37	PREDICTED: uncharacterized protein LOC101221021 [Cucumis sativus]	[more]
gi\|700209988\|gb\|KGN65084.1\|	9.1e-75	75.37	hypothetical protein Csa_1G196260 [Cucumis sativus]	[more]
gi\|659118162\|ref\|XP_008458978.1\|	1.5e-74	72.91	PREDICTED: uncharacterized protein LOC103498228 [Cucumis melo]	[more]
gi\|1009107203\|ref\|XP_015878402.1\|	5.7e-53	56.36	PREDICTED: uncharacterized protein LOC107414739 [Ziziphus jujuba]	[more]
gi\|590626677\|ref\|XP_007026236.1\|	1.7e-49	55.66	Uncharacterized protein TCM_030338 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G004070.1	CmaCh13G004070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 114..134 scor
None	No IPR available	PANTHER	PTHR31903	FAMILY NOT NAMED	coord: 1..202 score: 6.4
None	No IPR available	PANTHER	PTHR31903:SF5	SUBFAMILY NOT NAMED	coord: 1..202 score: 6.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh13G004070	Cla008974	Watermelon (97103) v1	cmawmB205
CmaCh13G004070	Csa1G196260	Cucumber (Chinese Long) v2	cmacuB210
CmaCh13G004070	MELO3C021703	Melon (DHL92) v3.5.1	cmameB192
CmaCh13G004070	ClCG01G009950	Watermelon (Charleston Gray)	cmawcgB186
CmaCh13G004070	CSPI01G16230	Wild cucumber (PI 183967)	cmacpiB212
CmaCh13G004070	CmoCh13G004310	Cucurbita moschata (Rifu)	cmacmoB218
CmaCh13G004070	CmoCh18G005650	Cucurbita moschata (Rifu)	cmacmoB223
CmaCh13G004070	Lsi02G010880	Bottle gourd (USVL1VR-Ls)	cmalsiB207
CmaCh13G004070	Cp4.1LG10g10080	Cucurbita pepo (Zucchini)	cmacpeB218
CmaCh13G004070	Cp4.1LG20g06400	Cucurbita pepo (Zucchini)	cmacpeB234
CmaCh13G004070	Cp4.1LG02g09480	Cucurbita pepo (Zucchini)	cmacpeB242
CmaCh13G004070	MELO3C021703.2	Melon (DHL92) v3.6.1	cmamedB213
CmaCh13G004070	CsaV3_1G018460	Cucumber (Chinese Long) v3	cmacucB0241
CmaCh13G004070	Cla97C01G010060	Watermelon (97103) v2	cmawmbB213
CmaCh13G004070	Bhi08G000667	Wax gourd	cmawgoB0276
CmaCh13G004070	CsGy6G032710	Cucumber (Gy14) v2	cgybcmaB724
CmaCh13G004070	CsGy1G015820	Cucumber (Gy14) v2	cgybcmaB068
CmaCh13G004070	Carg25135	Silver-seed gourd	carcmaB1435
CmaCh13G004070	Carg00488	Silver-seed gourd	carcmaB0559

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh13G004070	CmaCh03G005650	Cucurbita maxima (Rimu)	cmacmaB233

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh13G004070	Cucurbita maxima (Rimu)	cmacmaB216
CmaCh13G004070	Watermelon (97103) v1	cmawmB197
CmaCh13G004070	Cucurbita pepo (Zucchini)	cmacpeB212
CmaCh13G004070	Wax gourd	cmawgoB0253
CmaCh13G004070	Wax gourd	cmawgoB0260