CsGy1G007340 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G007340
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Putative bolA protein
Location	Chr1 : 4707362 .. 4709729 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTTAAAAATTGTGCTGCTTTTACCGATTTACCAAAAATTTAGATTTACTTCTCACTCCTCAACACTGCTTACAAAGACGAAAGGTTCGTGCCGAATTTGCGTCGCATTGAAGCAGGGCATTTCCAACGGCCGGTCGTCTCCGAACGTCGAGGGGGCTGTTTCGTGTAACGCCGGTCAGTACTACGCGTCAATCAACAATATTTATTCTCATAATTTTTCAATGATGTCTCATCAATTTTCGAATTTGCTCTTCCCCTAGTTCGTTCGTTGATGATAAATTCTTTTGTTATTCGAATCAGAACTGAGAAATGTAAAATATAGATTCTACAATTTTACCATTGAATCATTCAATTCTCTGAAACTGTGTCTTCTTAAGGATGCAAATTTTGTAATTCGAAAAACAGGAATCGCAGGGGATCGTTCAGACATTTTATCGAACAGTATGGCTTCACGAGGGGCAAACGTGGTGCTATCGAGGGCTAATAGAATGAAGACGAAGTTGCAGTCAGCACTATCAGCGAGTTTATTGGAAATTGAGGACGTTTCGCACCAGCATGCTGGGCATGCGGCTGTGAAAGGCAGCGCTGGAGAGACTCATTTCAATGTGAAGATTGTGTCTCCAAAATTTGAAGGGCAGAGCCTTGTGAAGCGCCATAGAATGGTGTATGATGCTTTGGCTGAAGAGCTTCAATCTGGGTTACATGCAATTTCAATAGTGGCAAAAACTCCACAAGAAACTGGAGCAAAATGATTTTCAGATTCGCCTCACAATGTGAGTTTTCAAATGATTTCTATAGTTTAGAATTGCAATGATTTAGGCATTTATGCTGGGTCTTGTATGATGTATATGCTACTTATCAATTTCAAGAGATGAGTTAAAGCTTTAAATGCCATGGAAAATTTTTTCAGCTTGTTAATTACAACTGGGAAGACACTGTATTGTAGGATAAATGCTGCTCAAAGAAAAAAAGATACATTTTCACTTATTAGATGCCTTGATTGTGGTGCTTCTATCATATTTGACTAGATTTGTTATTTTAGACTAGTTCTTATTCAACTGAATTGACTTATCTTGGATCTAAAAGTACACTATTTTGTTTTATTTTCTTTATGCATATAACATTTTCATTATAATACATGTTCTTCGATTAAAGTTCAACCCATGCCTGCAATAGTGAGGAGTAGTAGAAATTTAACTTGATTAGTTGTTTGTAATTTCACTTCAAAAGCTTCCTTTCTACTAGAGCTTGATCTAAATTCATATGTTTCAACCACTGTTATCTGTCATCTTTCATGAAACAGACTCATTTACCACTCACGAATGACTTATCATATTGAGAATCTATTACTCCAAACTTACGATGCAAAATCGACCTTACTTGAACATGATCTATTCTATAAGTTGTATAATTGTGTTCTTGAGTTCATCTAAATACGGGTTCATGTGATGGTCACAATTTAATCCACTTGGATAATATTTTTGTCATGTTGAAACCTATTACTCCCTCATTGACAGTGCATAAACATCTAGTAAGCATCTAAATAATGATTCATGTGATTTGTCACCTGTTCACTTCACTGAAACAGTATCATGAAATTCATCTATAAATAACTTGTCATATTGGAAATTTGTTACTCCACCCATTATGTGACAAATAGTAAGGATTCAAATAAGGGTTCGTGTAACGGTTACACAAGGTAATCTTCTAAAGGCCAAATTCCATGATTAGCACATGTAGAATCGAATACCTTCATGCATCATCATTGAAATCTCCCTCGATTACATACCTTATCAAAAAGATCTATTCTGTGCTTAAACATCAATTTGCTCCCATTTTAAGTCTCAAATGTTGGATTTTCTTTTTATCGTGCAGAGTGGGCCAAATTGTGAAGCCAAGAAAGGAGGAGTGAACTTTACCTCTCAACTCATAGGAATTTCGAAAATGTATGTGTATACTCGAGGTTGTTGTCTTTCTAATTTGTTCTCCAAAAAAATGTTAAAGACCAAATACATTGTGGCTCCTTACAAATACTTCTAGCTTTGCTGCTCTCCCTTGATTATAAAGATAGACTTCATGTCTTGAGTTGATTCTGAATTTAGGTACTAACCTTGCAAGTGCCTTGTTTAAGTTCCCTATCTTGAAGTTTGGGTGAAAGGAAAAATTGAAAAACTGATAAAAAAAACAGCTCAAATTGACAGAAACTGATATTGGTTGGGTTAGAACTAATTTGGTTTGACTGTTTCGATTTTGATAGGGAAAATATGATATTGAATTGGTTTTGGGTTTTTTAAGACGAACCGACGGATAATATTAATATAATTCAAATTATAGCATTTAGCATTAGCAGTCGAGTTTGGCAT

mRNA sequence

ATGAGTTCGTGCCGAATTTGCGTCGCATTGAAGCAGGGCATTTCCAACGGCCGGTCGTCTCCGAACGTCGAGGGGGCTGTTTCGTGTAACGCCGGAATCGCAGGGGATCGTTCAGACATTTTATCGAACAGTATGGCTTCACGAGGGGCAAACGTGGTGCTATCGAGGGCTAATAGAATGAAGACGAAGTTGCAGTCAGCACTATCAGCGAGTTTATTGGAAATTGAGGACGTTTCGCACCAGCATGCTGGGCATGCGGCTGTGAAAGGCAGCGCTGGAGAGACTCATTTCAATGTGAAGATTGTGTCTCCAAAATTTGAAGGGCAGAGCCTTGTGAAGCGCCATAGAATGGTGTATGATGCTTTGGCTGAAGAGCTTCAATCTGGGTTACATGCAATTTCAATAAGTGGGCCAAATTGTGAAGCCAAGAAAGGAGGAGTGAACTTTACCTCTCAACTCATAGGAATTTCGAAAATGTATGTGTATACTCGAGACGAACCGACGGATAATATTAATATAATTCAAATTATAGCATTTAGCATTAGCAGTCGAGTTTGGCAT

Coding sequence (CDS)

ATGAGTTCGTGCCGAATTTGCGTCGCATTGAAGCAGGGCATTTCCAACGGCCGGTCGTCTCCGAACGTCGAGGGGGCTGTTTCGTGTAACGCCGGAATCGCAGGGGATCGTTCAGACATTTTATCGAACAGTATGGCTTCACGAGGGGCAAACGTGGTGCTATCGAGGGCTAATAGAATGAAGACGAAGTTGCAGTCAGCACTATCAGCGAGTTTATTGGAAATTGAGGACGTTTCGCACCAGCATGCTGGGCATGCGGCTGTGAAAGGCAGCGCTGGAGAGACTCATTTCAATGTGAAGATTGTGTCTCCAAAATTTGAAGGGCAGAGCCTTGTGAAGCGCCATAGAATGGTGTATGATGCTTTGGCTGAAGAGCTTCAATCTGGGTTACATGCAATTTCAATAAGTGGGCCAAATTGTGAAGCCAAGAAAGGAGGAGTGAACTTTACCTCTCAACTCATAGGAATTTCGAAAATGTATGTGTATACTCGAGACGAACCGACGGATAATATTAATATAATTCAAATTATAGCATTTAGCATTAGCAGTCGAGTTTGGCAT

Protein sequence

MSSCRICVALKQGISNGRSSPNVEGAVSCNAGIAGDRSDILSNSMASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKFEGQSLVKRHRMVYDALAEELQSGLHAISISGPNCEAKKGGVNFTSQLIGISKMYVYTRDEPTDNINIIQIIAFSISSRVWH

Homology

[Close]

BLAST of CsGy1G007340 vs. NCBI nr
Match: KGN64204.1 (hypothetical protein Csa_1G043070 [Cucumis sativus])

HSP 1 Score: 173.3 bits (438), Expect = 7.6e-40
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 45  MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 104
           MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP
Sbjct: 1   MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60

Query: 105 KFEGQSLVKRHRMVYDALAEELQSGLHAISI 136
           KFEGQSLVKRHRMVYDALAEELQSGLHAISI
Sbjct: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISI 91

[Close]

BLAST of CsGy1G007340 vs. NCBI nr
Match: XP_022994950.1 (protein BOLA1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 165.2 bits (417), Expect = 2.1e-37
Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 45  MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 104
           MASRGANVVLSRANRMKTKLQSALSAS+LEIEDVSHQHAGHA VKGS GETHFNVKIVSP
Sbjct: 1   MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSP 60

Query: 105 KFEGQSLVKRHRMVYDALAEELQSGLHAISI 136
            FEGQSLVKRHRMVYDALA+ELQSGLHAISI
Sbjct: 61  NFEGQSLVKRHRMVYDALADELQSGLHAISI 91

[Close]

BLAST of CsGy1G007340 vs. NCBI nr
Match: ONK73631.1 (uncharacterized protein A4U43_C04F33630 [Asparagus officinalis])

HSP 1 Score: 148.3 bits (373), Expect = 2.6e-32
Identity = 74/103 (71.84%), Postives = 88/103 (85.44%), Query Frame = 0


Query: 33  IAGDRSDILSNSMASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSA 92
           +    +DI+ + M SRGANV+L+RANRM+ KLQS+L AS+LEIEDVS+QHAGHAAVKG  
Sbjct: 133 VCATEADIVGSKMGSRGANVLLTRANRMRQKLQSSLEASVLEIEDVSYQHAGHAAVKGDP 192

Query: 93  GETHFNVKIVSPKFEGQSLVKRHRMVYDALAEELQSGLHAISI 136
            ETHFN+KIVSPKFEGQSLVKRHRMVY+ L +EL SGLHA+SI
Sbjct: 193 NETHFNLKIVSPKFEGQSLVKRHRMVYELLDDELNSGLHAVSI 235

[Close]

BLAST of CsGy1G007340 vs. NCBI nr
Match: XP_011003692.1 (PREDICTED: sufE-like protein, chloroplastic [Populus euphratica])

HSP 1 Score: 146.7 bits (369), Expect = 7.6e-32
Identity = 79/93 (84.95%), Postives = 87/93 (93.55%), Query Frame = 0


Query: 45  MASRG-ANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKG-SAGETHFNVKIV 104
           M SRG AN+VLSRA+RMK KLQS+L ASLLEIEDVSHQHAGHAAVKG +AGETHFNVKIV
Sbjct: 1   MGSRGVANMVLSRASRMKAKLQSSLEASLLEIEDVSHQHAGHAAVKGNTAGETHFNVKIV 60

Query: 105 SPKFEGQSLVKRHRMVYDALAEELQSGLHAISI 136
           SPKF+G +LVKRHR+VYDALAEELQSGLHA+SI
Sbjct: 61  SPKFDGLNLVKRHRLVYDALAEELQSGLHALSI 93

[Close]

BLAST of CsGy1G007340 vs. NCBI nr
Match: XP_015966216.1 (protein BOLA1, chloroplastic [Arachis duranensis] >XP_016203954.1 protein BOLA1, chloroplastic [Arachis ipaensis] >XP_025656411.1 protein BOLA1, chloroplastic-like [Arachis hypogaea])

HSP 1 Score: 146.0 bits (367), Expect = 1.3e-31
Identity = 76/92 (82.61%), Postives = 87/92 (94.57%), Query Frame = 0


Query: 45  MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKG-SAGETHFNVKIVS 104
           MASRGA+VVLSRANR+K+KLQ+AL A++LE++DVS+QHAGHAAVKG S  ETHFNVKIVS
Sbjct: 1   MASRGASVVLSRANRIKSKLQTALEATVLEVDDVSYQHAGHAAVKGNSDNETHFNVKIVS 60

Query: 105 PKFEGQSLVKRHRMVYDALAEELQSGLHAISI 136
           PKF+GQSLVKRHRMVYD LA+ELQSGLHAISI
Sbjct: 61  PKFDGQSLVKRHRMVYDLLADELQSGLHAISI 92

[Close]

BLAST of CsGy1G007340 vs. TAIR10
Match: AT4G26500.1 (chloroplast sulfur E)

HSP 1 Score: 107.5 bits (267), Expect = 9.3e-24
Identity = 57/92 (61.96%), Postives = 73/92 (79.35%), Query Frame = 0


Query: 49  GANVVL--SRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSA---GETHFNVKIVS 108
           G+NVV   SR  R++ KL+  L    LE+EDVS+QHAGHAAV+GSA   GETHFN++IVS
Sbjct: 272 GSNVVALGSRGMRIREKLEKELDPVELEVEDVSYQHAGHAAVRGSAGDDGETHFNLRIVS 331

Query: 109 PKFEGQSLVKRHRMVYDALAEELQSGLHAISI 136
             F+G+SLVKRHR++YD L +EL+SGLHA+SI
Sbjct: 332 DAFQGKSLVKRHRLIYDLLQDELKSGLHALSI 363

[Close]

BLAST of CsGy1G007340 vs. TAIR10
Match: AT1G55805.1 (BolA-like family protein)

HSP 1 Score: 98.6 bits (244), Expect = 4.3e-21
Identity = 57/103 (55.34%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 35  GDRSDILSN-SMASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKG-SA 94
           G RS  +S+       +  + +RA+RM+ KLQ  L    L IEDVS+QHAGHA +KG + 
Sbjct: 46  GSRSVAMSSVEKTGSDSGAIENRASRMREKLQKELEPVELVIEDVSYQHAGHAGMKGRTD 105

Query: 95  GETHFNVKIVSPKFEGQSLVKRHRMVYDALAEELQSGLHAISI 136
            ETHFNVKIVS  FEG +LVKRHR+VY  L EEL +GLHA+SI
Sbjct: 106 DETHFNVKIVSKGFEGMNLVKRHRLVYHLLREELDTGLHALSI 148

[Close]

BLAST of CsGy1G007340 vs. TAIR10
Match: AT5G17560.1 (BolA-like family protein)

HSP 1 Score: 46.6 bits (109), Expect = 2.0e-05
Identity = 27/74 (36.49%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 60  MKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKFEGQSLVKRHRMVY 119
           M+ K++  L+A  + + D+            S    H  + +VS  FEGQS V R RMVY
Sbjct: 105 MELKIKEQLNAESVTVTDM------------SGDGRHVCINVVSSAFEGQSAVNRQRMVY 164

Query: 120 DALAEELQSGLHAI 134
            A+ EELQ+ +HA+
Sbjct: 165 KAIWEELQNVVHAV 166

[Close]

BLAST of CsGy1G007340 vs. TAIR10
Match: AT5G09830.1 (BolA-like family protein)

HSP 1 Score: 46.2 bits (108), Expect = 2.6e-05
Identity = 30/77 (38.96%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 59  RMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKFEGQSLVKRHRMV 118
           +++  L S L    LE+ D+S          G  G + F V++VS +FEG+ L++RHRMV
Sbjct: 6   QVEASLTSKLKPIHLEVIDIS----------GGCGSS-FEVEVVSEQFEGKRLLERHRMV 65

Query: 119 YDALAEELQSGLHAISI 136
             AL EE++  +HA+SI
Sbjct: 66  NAALEEEMKE-IHALSI 70

[Close]

BLAST of CsGy1G007340 vs. Swiss-Prot
Match: sp|Q84W65|SUFE1_ARATH (SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SUFE1 PE=1 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 1.7e-22
Identity = 57/92 (61.96%), Postives = 73/92 (79.35%), Query Frame = 0


Query: 49  GANVVL--SRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSA---GETHFNVKIVS 108
           G+NVV   SR  R++ KL+  L    LE+EDVS+QHAGHAAV+GSA   GETHFN++IVS
Sbjct: 272 GSNVVALGSRGMRIREKLEKELDPVELEVEDVSYQHAGHAAVRGSAGDDGETHFNLRIVS 331

Query: 109 PKFEGQSLVKRHRMVYDALAEELQSGLHAISI 136
             F+G+SLVKRHR++YD L +EL+SGLHA+SI
Sbjct: 332 DAFQGKSLVKRHRLIYDLLQDELKSGLHALSI 363

[Close]

BLAST of CsGy1G007340 vs. Swiss-Prot
Match: sp|Q682I1|BOLA1_ARATH (Protein BOLA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BOLA1 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.8e-20
Identity = 57/103 (55.34%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 35  GDRSDILSN-SMASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKG-SA 94
           G RS  +S+       +  + +RA+RM+ KLQ  L    L IEDVS+QHAGHA +KG + 
Sbjct: 46  GSRSVAMSSVEKTGSDSGAIENRASRMREKLQKELEPVELVIEDVSYQHAGHAGMKGRTD 105

Query: 95  GETHFNVKIVSPKFEGQSLVKRHRMVYDALAEELQSGLHAISI 136
            ETHFNVKIVS  FEG +LVKRHR+VY  L EEL +GLHA+SI
Sbjct: 106 DETHFNVKIVSKGFEGMNLVKRHRLVYHLLREELDTGLHALSI 148

[Close]

BLAST of CsGy1G007340 vs. Swiss-Prot
Match: sp|Q12238|UVI31_SCHPO (UV-induced protein uvi31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=uvi31 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.6e-11
Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 54  LSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKG--SAGETHFNVKIVSPKFEGQSL 113
           + R +R+   L  AL    + + + S++H+ H A+KG     ETHF ++IVSP+F G S 
Sbjct: 9   MGRQDRIYKTLSEALKTDKITLYNDSYKHSHHIAMKGVPDTNETHFRLEIVSPEFSGMSR 68

Query: 114 VKRHRMVYDALAEELQSGLHAISIS 137
           V RHR+VY  L +E   GLHA+ I+
Sbjct: 69  VARHRLVYGLLKDEFDGGLHALQIT 93

[Close]

BLAST of CsGy1G007340 vs. Swiss-Prot
Match: sp|Q3T138|BOLA1_BOVIN (BolA-like protein 1 OS=Bos taurus OX=9913 GN=BOLA1 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.3e-10
Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = 0


Query: 44  SMASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVS 103
           S  S G+ V+      ++TKL+ AL+  +LE+ + S    GHA   GS  ETHF V +VS
Sbjct: 20  SRGSAGSGVIGPVEAAIRTKLEQALNPEVLELRNES---GGHAVPPGS--ETHFRVAVVS 79

Query: 104 PKFEGQSLVKRHRMVYDALAEELQSGLHAISI 136
            +FEG S ++RHR+V+ AL+EEL   +HA++I
Sbjct: 80  SRFEGLSPLQRHRLVHAALSEELAGPVHALAI 106

[Close]

BLAST of CsGy1G007340 vs. Swiss-Prot
Match: sp|Q5RCE5|BOLA1_PONAB (BolA-like protein 1 OS=Pongo abelii OX=9601 GN=BOLA1 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.3e-10
Identity = 40/89 (44.94%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 47  SRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKF 106
           S G+  V      ++TKL+ ALS  +LE+ + S    GHA   GS  ETHF V +VS +F
Sbjct: 23  SAGSGAVGPVEAAIRTKLEQALSPEVLELRNES---GGHAVPPGS--ETHFRVAVVSSRF 82

Query: 107 EGQSLVKRHRMVYDALAEELQSGLHAISI 136
           EG S ++RHR+++ ALAEEL   +HA++I
Sbjct: 83  EGLSPLQRHRLIHAALAEELAGPVHALAI 106

[Close]

BLAST of CsGy1G007340 vs. TrEMBL
Match: tr|A0A0A0LT67|A0A0A0LT67_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043070 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 5.0e-40
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 45  MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 104
           MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP
Sbjct: 1   MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60

Query: 105 KFEGQSLVKRHRMVYDALAEELQSGLHAISI 136
           KFEGQSLVKRHRMVYDALAEELQSGLHAISI
Sbjct: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISI 91

[Close]

BLAST of CsGy1G007340 vs. TrEMBL
Match: tr|A0A1U8Q145|A0A1U8Q145_NELNU (protein BOLA1, chloroplastic OS=Nelumbo nucifera OX=4432 GN=LOC104592056 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 8.6e-32
Identity = 74/91 (81.32%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 45  MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 104
           MASRG N + SRA+R+K KLQSAL AS+LE+EDVS+QHAGHAAVKGS  ETHFNVKIVSP
Sbjct: 1   MASRGVNALASRASRIKHKLQSALEASVLEVEDVSYQHAGHAAVKGSTNETHFNVKIVSP 60

Query: 105 KFEGQSLVKRHRMVYDALAEELQSGLHAISI 136
           KF GQSLVKRHRMVYD L+EELQSGLHA+SI
Sbjct: 61  KFRGQSLVKRHRMVYDLLSEELQSGLHALSI 91

[Close]

BLAST of CsGy1G007340 vs. TrEMBL
Match: tr|A0A2I4DMM5|A0A2I4DMM5_9ROSI (protein BOLA1, chloroplastic OS=Juglans regia OX=51240 GN=LOC108981609 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.1e-31
Identity = 75/92 (81.52%), Postives = 85/92 (92.39%), Query Frame = 0


Query: 45  MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSA-GETHFNVKIVS 104
           M SRGAN+VLSRANRM+ KLQSAL A+ LEI+DVS+QHAGHAAV+G+A  ETHFNVKIVS
Sbjct: 1   MGSRGANLVLSRANRMRAKLQSALEATALEIDDVSYQHAGHAAVRGTADSETHFNVKIVS 60

Query: 105 PKFEGQSLVKRHRMVYDALAEELQSGLHAISI 136
           PKF GQSLVKRHR+VYDALA+ELQSGLHA+SI
Sbjct: 61  PKFNGQSLVKRHRLVYDALADELQSGLHAVSI 92

[Close]

BLAST of CsGy1G007340 vs. TrEMBL
Match: tr|A0A2U1LMR1|A0A2U1LMR1_ARTAN (BolA protein OS=Artemisia annua OX=35608 GN=CTI12_AA474660 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.5e-31
Identity = 73/91 (80.22%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 45  MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 104
           M SRGANV+LSRA+R+KTKLQS L A LLE+EDVS+QHAGHAAVK +A ETHFNVK+VS 
Sbjct: 1   MGSRGANVLLSRASRIKTKLQSVLEAKLLEVEDVSYQHAGHAAVKDNANETHFNVKVVSG 60

Query: 105 KFEGQSLVKRHRMVYDALAEELQSGLHAISI 136
           KF+GQ+LVKRHRMVYDALA+EL+SGLHAISI
Sbjct: 61  KFDGQNLVKRHRMVYDALADELESGLHAISI 91

[Close]

BLAST of CsGy1G007340 vs. TrEMBL
Match: tr|A0A2K1Y8C7|A0A2K1Y8C7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G036800v3 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.3e-31
Identity = 76/93 (81.72%), Postives = 87/93 (93.55%), Query Frame = 0


Query: 45  MASRG-ANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKG-SAGETHFNVKIV 104
           M SRG AN++LSRA+RMK KLQS+L ASLLEIEDVSHQHAGHAA+KG +AGETHFNVKIV
Sbjct: 1   MGSRGVANMILSRASRMKAKLQSSLEASLLEIEDVSHQHAGHAAMKGNTAGETHFNVKIV 60

Query: 105 SPKFEGQSLVKRHRMVYDALAEELQSGLHAISI 136
           SPKF+G +LVKRHR+VYDAL+EELQSGLHA+SI
Sbjct: 61  SPKFDGLNLVKRHRLVYDALSEELQSGLHALSI 93

The following BLAST results are available for this feature:

BLAST of CsGy1G007340 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64204.1	7.6e-40	100.00	hypothetical protein Csa_1G043070 [Cucumis sativus]	[more]
XP_022994950.1	2.1e-37	94.51	protein BOLA1, chloroplastic [Cucurbita maxima]	[more]
ONK73631.1	2.6e-32	71.84	uncharacterized protein A4U43_C04F33630 [Asparagus officinalis]	[more]
XP_011003692.1	7.6e-32	84.95	PREDICTED: sufE-like protein, chloroplastic [Populus euphratica]	[more]
XP_015966216.1	1.3e-31	82.61	protein BOLA1, chloroplastic [Arachis duranensis] >XP_016203954.1 protein BOLA1,...	[more]

BLAST of CsGy1G007340 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G26500.1	9.3e-24	61.96	chloroplast sulfur E	[more]
AT1G55805.1	4.3e-21	55.34	BolA-like family protein	[more]
AT5G17560.1	2.0e-05	36.49	BolA-like family protein	[more]
AT5G09830.1	2.6e-05	38.96	BolA-like family protein	[more]

BLAST of CsGy1G007340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84W65\|SUFE1_ARATH	1.7e-22	61.96	SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q682I1\|BOLA1_ARATH	7.8e-20	55.34	Protein BOLA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BOLA1 PE=1 SV=1	[more]
sp\|Q12238\|UVI31_SCHPO	6.6e-11	41.18	UV-induced protein uvi31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...	[more]
sp\|Q3T138\|BOLA1_BOVIN	3.3e-10	43.48	BolA-like protein 1 OS=Bos taurus OX=9913 GN=BOLA1 PE=2 SV=1	[more]
sp\|Q5RCE5\|BOLA1_PONAB	3.3e-10	44.94	BolA-like protein 1 OS=Pongo abelii OX=9601 GN=BOLA1 PE=2 SV=1	[more]

BLAST of CsGy1G007340 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT67\|A0A0A0LT67_CUCSA	5.0e-40	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043070 PE=3 SV=1	[more]
tr\|A0A1U8Q145\|A0A1U8Q145_NELNU	8.6e-32	81.32	protein BOLA1, chloroplastic OS=Nelumbo nucifera OX=4432 GN=LOC104592056 PE=3 SV...	[more]
tr\|A0A2I4DMM5\|A0A2I4DMM5_9ROSI	1.1e-31	81.52	protein BOLA1, chloroplastic OS=Juglans regia OX=51240 GN=LOC108981609 PE=3 SV=1	[more]
tr\|A0A2U1LMR1\|A0A2U1LMR1_ARTAN	1.5e-31	80.22	BolA protein OS=Artemisia annua OX=35608 GN=CTI12_AA474660 PE=4 SV=1	[more]
tr\|A0A2K1Y8C7\|A0A2K1Y8C7_POPTR	3.3e-31	81.72	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G036800v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036065	BolA-like_sf
IPR002634	BolA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
biological_process	GO:0008150	biological_process
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G007340.1	CsGy1G007340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002634	BolA protein	PFAM	PF01722	BolA	coord: 64..136 e-value: 3.2E-28 score: 97.7
IPR002634	BolA protein	PANTHER	PTHR12735	BOLA-LIKE PROTEIN-RELATED	coord: 42..135
None	No IPR available	GENE3D	G3DSA:3.30.300.90		coord: 54..144 e-value: 2.2E-32 score: 113.2
None	No IPR available	PANTHER	PTHR12735:SF21	PROTEIN BOLA1, CHLOROPLASTIC	coord: 42..135
IPR036065	BolA-like superfamily	SUPERFAMILY	SSF82657	BolA-like	coord: 52..135

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G007340	Cla008389	Watermelon (97103) v1	cgybwmB042
CsGy1G007340	Csa1G043070	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G007340	MELO3C002161	Melon (DHL92) v3.5.1	cgybmeB022
CsGy1G007340	ClCG01G014880	Watermelon (Charleston Gray)	cgybwcgB020
CsGy1G007340	CSPI01G07470	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G007340	Lsi02G002670	Bottle gourd (USVL1VR-Ls)	cgyblsiB018
CsGy1G007340	Cp4.1LG09g10990	Cucurbita pepo (Zucchini)	cgybcpeB018
CsGy1G007340	MELO3C002161.2	Melon (DHL92) v3.6.1	cgybmedB020
CsGy1G007340	CsaV3_1G007440	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G007340	Cla97C01G013900	Watermelon (97103) v2	cgybwmbB010
CsGy1G007340	Bhi08G001106	Wax gourd	cgybwgoB025
CsGy1G007340	Carg06649	Silver-seed gourd	carcgybB0500

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G007340	Cucurbita maxima (Rimu)	cgybcmaB073
CsGy1G007340	Cucurbita maxima (Rimu)	cgybcmaB085
CsGy1G007340	Cucurbita moschata (Rifu)	cgybcmoB067
CsGy1G007340	Cucurbita moschata (Rifu)	cgybcmoB082
CsGy1G007340	Cucurbita pepo (Zucchini)	cgybcpeB069
CsGy1G007340	Silver-seed gourd	carcgybB0393