CSPI01G07470 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G07470
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	BolA-like protein, expressed
Location	Chr1 : 4745516 .. 4747616 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGACAAAAGAAAAAAAACGATTTTATGAGTTTTAAAAATTGTGCTGCTTTTACCGATTTACCAAAAATTTAGATTTACTTCTCACTCCTCAACACTGCTTACAAAGACAAAAGGTTCGTGCCGAATTTGCGTCGCATTGAAGCAGGGCATTTCCAACTGCCGGTCGTCTCCGAACGTCGAGGGGGCTGTTTCGTGTAACGCCGGTCAGTACTACGCGTCAATCAACAATATTTATTCTCATAATTTTTCAATGATGTCTCATCAATTTTCGAATTTGCTCTTCCCCTAGTTCGTTCGTTGATGATAAATTCTTTTGTTATTCGAATCAGAACTGAGAAATGTAAAATATAGATTCTACAATTTTACCATTGAATCATTCAATTCTCTGAAACTGTGTCTTCTTATGGATGCAAATTTTGTAATTCGAAAAACAGGAATCGCAGGGGATCGTTCAGACATTTTATCGAACAGTATGGCTTCACGAGGGGCAAACGTGGTGCTATCGAGGGCTAATAGAATGAAGACGAAGTTGCAGTCAGCACTATCAGCGAGTTTATTGGAAATTGAGGACGTTTCGCACCAGCATGCTGGGCATGCGGCTGTGAAAGGCAGCGCTGGAGAGACTCATTTCAATGTGAAGATTGTGTCTCCAAAATTTGAAGGGCAGAGCCTTGTGAAGCGCCATAGAATGGTGTATGATGCTTTGGCTGAAGAGCTTCAATCTGGGTTACATGCAATTTCAATAGTGGCAAAAACTCCACAAGAAACTGGAGCAAAATGATTTTCAGATTCGCCTCACAATGTGAGTTTTCAAATGATTTCTATAGTTTAGAATTGCAATGATTTAGGCATTTATGCTGGGTCTTGTATGATGTATATGCTACTTATCAATTTCAAGAGATGAGTTAAAGCTTTAAATGCCATGGAAAATTTTTTCAGCTTGTTAATTACAACTGGGAAGACACTGTATTGTAGGATAAATGCTGCTCAAAGAAAAAAAGATACATTTTCACTTATTAGATGCCTTGATTGTGGTGCTTCTATCATATTTGACTAGATTTGTTATTTTAGACTAGTTCTTATTCAACTGAATTGACTTATCTTGGATCTAAAAGTACACTATTTTGTTTTATTTTCTTTATGCATATAACATTTTCATTATAATACATGTTCTTCGATTAAAGTTCAACCCATGCCTGCAATAGTGAGGAGTAGTAGAAATTTAACTTGATTAGTTGTTTGTAATTTCACTTCAAAAGCTTCCTTTCTACTAGAGCTTGATCTAAATTCATATGTTTCAACCACTGTTATCTGCCATCTTTCATGAAACAGACTCATTTACCACTCACGAATGACTTATCATATTGAGAATCTATTACTCCAAACTTACGATGCAAAATCGACCTTACTTGAACATGATCTATTCTATAAGTTGTATAATTGTGTTCTTGAGTTCATCTAAATACGGGTTCATGTGATGGTCACAATTTAATCCACTTGGATAATATTCTTGTCATGTTGAAACCTATTACTCCCTCATTGACAGTGCATAAACATCTAGTAAGCATCTAAATAATGATTCATGTGATTTGTCACCTTTTCACTTCACTGAAACAGTATCATGAAATTCATCTATAAATAACTTGTCATATTGGAAATTTGTTACTCCACCCATTATGTGACAAATAGTAAGGATTCAAATAAGGGTTCGTGTAACGGTTACACAAGGTAATCTTCTAAAGGCCAAATTCCATGATTAGCACATGTAGAATCGAATACCTTCATGCATCATCATTGAAATCTCCCTCGATTACATACCTTATCAAAAAGATCTATTCTGTGCTTAAACATCAATTTGCTCCCATTTTAAGTCTCAAATGTTGGATTTTCTTTTTATCGTGCAGAGTGGGCCAAATTGTGAAGCCAAGAAAGGAGGAGTGAACTTTACCTCTCAACTCGTAGGAATTTCGAAAATGTATGTGTATACTCGAGGTTGTTGTCTTTCTAATTTGTTCTCCAAAAAAATGTTAAAGACCAAATACATTGTGGCTCCTTACAAATACTTCTAGCTTTGCTGCTCTCCCTTGATTATAAAGATAG

mRNA sequence

ATGGCTTCACGAGGGGCAAACGTGGTGCTATCGAGGGCTAATAGAATGAAGACGAAGTTGCAGTCAGCACTATCAGCGAGTTTATTGGAAATTGAGGACGTTTCGCACCAGCATGCTGGGCATGCGGCTGTGAAAGGCAGCGCTGGAGAGACTCATTTCAATGTGAAGATTGTGTCTCCAAAATTTGAAGGGCAGAGCCTTGTGAAGCGCCATAGAATGGTGTATGATGCTTTGGCTGAAGAGCTTCAATCTGGGTTACATGCAATTTCAATAGTGGCAAAAACTCCACAAGAAACTGGAGCAAAATGA

Coding sequence (CDS)

ATGGCTTCACGAGGGGCAAACGTGGTGCTATCGAGGGCTAATAGAATGAAGACGAAGTTGCAGTCAGCACTATCAGCGAGTTTATTGGAAATTGAGGACGTTTCGCACCAGCATGCTGGGCATGCGGCTGTGAAAGGCAGCGCTGGAGAGACTCATTTCAATGTGAAGATTGTGTCTCCAAAATTTGAAGGGCAGAGCCTTGTGAAGCGCCATAGAATGGTGTATGATGCTTTGGCTGAAGAGCTTCAATCTGGGTTACATGCAATTTCAATAGTGGCAAAAACTCCACAAGAAACTGGAGCAAAATGA

Homology

[Close]

BLAST of CSPI01G07470 vs. Swiss-Prot
Match: SUFE1_ARATH (SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SUFE1 PE=1 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 4.8e-26
Identity = 63/99 (63.64%), Postives = 79/99 (79.80%), Query Frame = 1


Query: 28  GANVVL--SRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSA---GETHFNVKIVS 87
           G+NVV   SR  R++ KL+  L    LE+EDVS+QHAGHAAV+GSA   GETHFN++IVS
Sbjct: 272 GSNVVALGSRGMRIREKLEKELDPVELEVEDVSYQHAGHAAVRGSAGDDGETHFNLRIVS 331

Query: 88  PKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQE 122
             F+G+SLVKRHR++YD L +EL+SGLHA+SIVAKTP E
Sbjct: 332 DAFQGKSLVKRHRLIYDLLQDELKSGLHALSIVAKTPAE 370

[Close]

BLAST of CSPI01G07470 vs. Swiss-Prot
Match: BOLA1_ARATH (Protein BOLA1, chloroplastic OS=Arabidopsis thaliana GN=BOLA1 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.5e-24
Identity = 65/120 (54.17%), Postives = 82/120 (68.33%), Query Frame = 1


Query: 8   RKTGIAGDRSDILSN-SMASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAA 67
           + TG  G RS  +S+       +  + +RA+RM+ KLQ  L    L IEDVS+QHAGHA 
Sbjct: 41  KSTG-TGSRSVAMSSVEKTGSDSGAIENRASRMREKLQKELEPVELVIEDVSYQHAGHAG 100

Query: 68  VKGSAG-ETHFNVKIVSPKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 126
           +KG    ETHFNVKIVS  FEG +LVKRHR+VY  L EEL +GLHA+SIV+KTP E+ +K
Sbjct: 101 MKGRTDDETHFNVKIVSKGFEGMNLVKRHRLVYHLLREELDTGLHALSIVSKTPSESPSK 159

[Close]

BLAST of CSPI01G07470 vs. Swiss-Prot
Match: BOLA1_PONAB (BolA-like protein 1 OS=Pongo abelii GN=BOLA1 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.1e-13
Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 1


Query: 26  SRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKF 85
           S G+  V      ++TKL+ ALS  +LE+ + S    GHA   GS  ETHF V +VS +F
Sbjct: 23  SAGSGAVGPVEAAIRTKLEQALSPEVLELRNES---GGHAVPPGS--ETHFRVAVVSSRF 82

Query: 86  EGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETG 124
           EG S ++RHR+++ ALAEEL   +HA++I A+TP + G
Sbjct: 83  EGLSPLQRHRLIHAALAEELAGPVHALAIQARTPAQWG 115

[Close]

BLAST of CSPI01G07470 vs. Swiss-Prot
Match: BOLA1_BOVIN (BolA-like protein 1 OS=Bos taurus GN=BOLA1 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.8e-12
Identity = 43/99 (43.43%), Postives = 64/99 (64.65%), Query Frame = 1


Query: 23  SMASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVS 82
           S  S G+ V+      ++TKL+ AL+  +LE+ + S    GHA   GS  ETHF V +VS
Sbjct: 20  SRGSAGSGVIGPVEAAIRTKLEQALNPEVLELRNES---GGHAVPPGS--ETHFRVAVVS 79

Query: 83  PKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQE 122
            +FEG S ++RHR+V+ AL+EEL   +HA++I A+TP +
Sbjct: 80  SRFEGLSPLQRHRLVHAALSEELAGPVHALAIQARTPAQ 113

[Close]

BLAST of CSPI01G07470 vs. Swiss-Prot
Match: BOLA1_MOUSE (BolA-like protein 1 OS=Mus musculus GN=Bola1 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.8e-12
Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = 1


Query: 16  RSDILSNSMASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETH 75
           RS +   S  S  A  V +    ++ KL+ ALS  +LE+ + S    GHA   GS  ETH
Sbjct: 16  RSCVSRGSAGSAAAGPVEAA---IRAKLEQALSPEVLELRNES---GGHAVPAGS--ETH 75

Query: 76  FNVKIVSPKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQE 122
           F V +VS +FEG S ++RHR+V++AL+EEL   +HA++I AKTP +
Sbjct: 76  FRVAVVSSRFEGMSPLQRHRLVHEALSEELAGPVHALAIQAKTPAQ 113

[Close]

BLAST of CSPI01G07470 vs. TrEMBL
Match: A0A0A0LT67_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043070 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 5.9e-47
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 24  MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 83
           MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP
Sbjct: 1   MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60

Query: 84  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 126
           KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK
Sbjct: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 102

[Close]

BLAST of CSPI01G07470 vs. TrEMBL
Match: B9I4Y9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s03380g PE=3 SV=2)

HSP 1 Score: 161.4 bits (407), Expect = 7.2e-37
Identity = 85/103 (82.52%), Postives = 96/103 (93.20%), Query Frame = 1


Query: 24  MASRG-ANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGS-AGETHFNVKIV 83
           M SRG AN++LSRA+RMK KLQS+L ASLLEIEDVSHQHAGHAA+KG+ AGETHFNVKIV
Sbjct: 1   MGSRGVANMILSRASRMKAKLQSSLEASLLEIEDVSHQHAGHAAMKGNTAGETHFNVKIV 60

Query: 84  SPKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGA 125
           SPKF+G +LVKRHR+VYDAL+EELQSGLHA+SIVAKTPQE GA
Sbjct: 61  SPKFDGLNLVKRHRLVYDALSEELQSGLHALSIVAKTPQEEGA 103

[Close]

BLAST of CSPI01G07470 vs. TrEMBL
Match: A0A0S3TCF8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G214500 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 8.0e-36
Identity = 81/102 (79.41%), Postives = 93/102 (91.18%), Query Frame = 1


Query: 24  MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAG-ETHFNVKIVS 83
           M SRGA VVLSRANR++TKLQSAL A++LE++DVSHQHAGHAAV+GS+  ETHFNVKIVS
Sbjct: 1   MGSRGATVVLSRANRIRTKLQSALEATVLEVDDVSHQHAGHAAVRGSSDKETHFNVKIVS 60

Query: 84  PKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGA 125
            KFEGQSLVKRHR+VYD LA+ELQSGLHA+SIVAKTP ET +
Sbjct: 61  SKFEGQSLVKRHRLVYDLLADELQSGLHALSIVAKTPNETSS 102

[Close]

BLAST of CSPI01G07470 vs. TrEMBL
Match: W1PMW2_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00029p00039100 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 8.0e-36
Identity = 83/100 (83.00%), Postives = 90/100 (90.00%), Query Frame = 1


Query: 24  MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 83
           MASR AN +LSRA+RMK KLQ+AL AS+LEIEDVS+QHAGHA VKG A ETHFNVKIVSP
Sbjct: 1   MASR-ANAMLSRASRMKQKLQTALEASVLEIEDVSYQHAGHAGVKGDATETHFNVKIVSP 60

Query: 84  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETG 124
           KFEGQSLVKRHR+VYD L EELQSGLHA+SIVAKTPQE G
Sbjct: 61  KFEGQSLVKRHRLVYDLLTEELQSGLHALSIVAKTPQEVG 99

[Close]

BLAST of CSPI01G07470 vs. TrEMBL
Match: A0A0L9VHX6_PHAAN (Eukaryotic translation initiation factor 3 subunit J OS=Phaseolus angularis GN=LR48_Vigan10g047000 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.0e-35
Identity = 81/100 (81.00%), Postives = 92/100 (92.00%), Query Frame = 1


Query: 24  MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAG-ETHFNVKIVS 83
           M SRGA VVLSRANR++TKLQSAL A++LE++DVSHQHAGHAAV+GS+  ETHFNVKIVS
Sbjct: 1   MGSRGATVVLSRANRIRTKLQSALEATVLEVDDVSHQHAGHAAVRGSSDKETHFNVKIVS 60

Query: 84  PKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQET 123
            KFEGQSLVKRHR+VYD LA+ELQSGLHA+SIVAKTP ET
Sbjct: 61  SKFEGQSLVKRHRLVYDLLADELQSGLHALSIVAKTPNET 100

[Close]

BLAST of CSPI01G07470 vs. TAIR10
Match: AT4G26500.1 (AT4G26500.1 chloroplast sulfur E)

HSP 1 Score: 118.6 bits (296), Expect = 2.7e-27
Identity = 63/99 (63.64%), Postives = 79/99 (79.80%), Query Frame = 1


Query: 28  GANVVL--SRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSA---GETHFNVKIVS 87
           G+NVV   SR  R++ KL+  L    LE+EDVS+QHAGHAAV+GSA   GETHFN++IVS
Sbjct: 272 GSNVVALGSRGMRIREKLEKELDPVELEVEDVSYQHAGHAAVRGSAGDDGETHFNLRIVS 331

Query: 88  PKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQE 122
             F+G+SLVKRHR++YD L +EL+SGLHA+SIVAKTP E
Sbjct: 332 DAFQGKSLVKRHRLIYDLLQDELKSGLHALSIVAKTPAE 370

[Close]

BLAST of CSPI01G07470 vs. TAIR10
Match: AT1G55805.1 (AT1G55805.1 BolA-like family protein)

HSP 1 Score: 112.1 bits (279), Expect = 2.6e-25
Identity = 65/120 (54.17%), Postives = 82/120 (68.33%), Query Frame = 1


Query: 8   RKTGIAGDRSDILSN-SMASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAA 67
           + TG  G RS  +S+       +  + +RA+RM+ KLQ  L    L IEDVS+QHAGHA 
Sbjct: 41  KSTG-TGSRSVAMSSVEKTGSDSGAIENRASRMREKLQKELEPVELVIEDVSYQHAGHAG 100

Query: 68  VKGSAG-ETHFNVKIVSPKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 126
           +KG    ETHFNVKIVS  FEG +LVKRHR+VY  L EEL +GLHA+SIV+KTP E+ +K
Sbjct: 101 MKGRTDDETHFNVKIVSKGFEGMNLVKRHRLVYHLLREELDTGLHALSIVSKTPSESPSK 159

[Close]

BLAST of CSPI01G07470 vs. TAIR10
Match: AT5G17560.1 (AT5G17560.1 BolA-like family protein)

HSP 1 Score: 51.2 bits (121), Expect = 5.3e-07
Identity = 31/84 (36.90%), Postives = 45/84 (53.57%), Query Frame = 1


Query: 39  MKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKFEGQSLVKRHRMVY 98
           M+ K++  L+A  + + D+S                H  + +VS  FEGQS V R RMVY
Sbjct: 105 MELKIKEQLNAESVTVTDMS------------GDGRHVCINVVSSAFEGQSAVNRQRMVY 164

Query: 99  DALAEELQSGLHAI-SIVAKTPQE 122
            A+ EELQ+ +HA+  +  KTP E
Sbjct: 165 KAIWEELQNVVHAVDQMTTKTPSE 176

[Close]

BLAST of CSPI01G07470 vs. TAIR10
Match: AT5G09830.1 (AT5G09830.1 BolA-like family protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.6e-06
Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 1


Query: 38  RMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKFEGQSLVKRHRMV 97
           +++  L S L    LE+ D+S          G  G + F V++VS +FEG+ L++RHRMV
Sbjct: 6   QVEASLTSKLKPIHLEVIDIS----------GGCGSS-FEVEVVSEQFEGKRLLERHRMV 65

Query: 98  YDALAEELQSGLHAISI-VAKTPQE 122
             AL EE++  +HA+SI  A+TPQ+
Sbjct: 66  NAALEEEMKE-IHALSIKKAQTPQQ 78

[Close]

BLAST of CSPI01G07470 vs. NCBI nr
Match: gi|700209108|gb|KGN64204.1| (hypothetical protein Csa_1G043070 [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 8.5e-47
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 1


Query: 24  MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 83
           MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP
Sbjct: 1   MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60

Query: 84  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 126
           KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK
Sbjct: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 102

[Close]

BLAST of CSPI01G07470 vs. NCBI nr
Match: gi|743919336|ref|XP_011003692.1| (PREDICTED: sufE-like protein, chloroplastic [Populus euphratica])

HSP 1 Score: 164.1 bits (414), Expect = 1.6e-37
Identity = 88/103 (85.44%), Postives = 96/103 (93.20%), Query Frame = 1


Query: 24  MASRG-ANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGS-AGETHFNVKIV 83
           M SRG AN+VLSRA+RMK KLQS+L ASLLEIEDVSHQHAGHAAVKG+ AGETHFNVKIV
Sbjct: 1   MGSRGVANMVLSRASRMKAKLQSSLEASLLEIEDVSHQHAGHAAVKGNTAGETHFNVKIV 60

Query: 84  SPKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGA 125
           SPKF+G +LVKRHR+VYDALAEELQSGLHA+SIVAKTPQE GA
Sbjct: 61  SPKFDGLNLVKRHRLVYDALAEELQSGLHALSIVAKTPQEEGA 103

[Close]

BLAST of CSPI01G07470 vs. NCBI nr
Match: gi|1012173015|ref|XP_015966216.1| (PREDICTED: protein BOLA1, chloroplastic [Arachis duranensis])

HSP 1 Score: 162.9 bits (411), Expect = 3.6e-37
Identity = 86/104 (82.69%), Postives = 99/104 (95.19%), Query Frame = 1


Query: 24  MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSA-GETHFNVKIVS 83
           MASRGA+VVLSRANR+K+KLQ+AL A++LE++DVS+QHAGHAAVKG++  ETHFNVKIVS
Sbjct: 1   MASRGASVVLSRANRIKSKLQTALEATVLEVDDVSYQHAGHAAVKGNSDNETHFNVKIVS 60

Query: 84  PKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQE-TGAK 126
           PKF+GQSLVKRHRMVYD LA+ELQSGLHAISIVAKTPQE TGAK
Sbjct: 61  PKFDGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETTGAK 104

[Close]

BLAST of CSPI01G07470 vs. NCBI nr
Match: gi|566196591|ref|XP_002318341.2| (hypothetical protein POPTR_0012s03380g [Populus trichocarpa])

HSP 1 Score: 161.4 bits (407), Expect = 1.0e-36
Identity = 85/103 (82.52%), Postives = 96/103 (93.20%), Query Frame = 1


Query: 24  MASRG-ANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGS-AGETHFNVKIV 83
           M SRG AN++LSRA+RMK KLQS+L ASLLEIEDVSHQHAGHAA+KG+ AGETHFNVKIV
Sbjct: 1   MGSRGVANMILSRASRMKAKLQSSLEASLLEIEDVSHQHAGHAAMKGNTAGETHFNVKIV 60

Query: 84  SPKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGA 125
           SPKF+G +LVKRHR+VYDAL+EELQSGLHA+SIVAKTPQE GA
Sbjct: 61  SPKFDGLNLVKRHRLVYDALSEELQSGLHALSIVAKTPQEEGA 103

[Close]

BLAST of CSPI01G07470 vs. NCBI nr
Match: gi|965617442|dbj|BAU02592.1| (hypothetical protein VIGAN_11214500 [Vigna angularis var. angularis])

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-35
Identity = 81/102 (79.41%), Postives = 93/102 (91.18%), Query Frame = 1


Query: 24  MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAG-ETHFNVKIVS 83
           M SRGA VVLSRANR++TKLQSAL A++LE++DVSHQHAGHAAV+GS+  ETHFNVKIVS
Sbjct: 1   MGSRGATVVLSRANRIRTKLQSALEATVLEVDDVSHQHAGHAAVRGSSDKETHFNVKIVS 60

Query: 84  PKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGA 125
            KFEGQSLVKRHR+VYD LA+ELQSGLHA+SIVAKTP ET +
Sbjct: 61  SKFEGQSLVKRHRLVYDLLADELQSGLHALSIVAKTPNETSS 102

The following BLAST results are available for this feature:

BLAST of CSPI01G07470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SUFE1_ARATH	4.8e-26	63.64	SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SUFE...	[more]
BOLA1_ARATH	4.5e-24	54.17	Protein BOLA1, chloroplastic OS=Arabidopsis thaliana GN=BOLA1 PE=1 SV=1	[more]
BOLA1_PONAB	6.1e-13	44.90	BolA-like protein 1 OS=Pongo abelii GN=BOLA1 PE=2 SV=1	[more]
BOLA1_BOVIN	1.8e-12	43.43	BolA-like protein 1 OS=Bos taurus GN=BOLA1 PE=2 SV=1	[more]
BOLA1_MOUSE	1.8e-12	43.40	BolA-like protein 1 OS=Mus musculus GN=Bola1 PE=1 SV=1	[more]

BLAST of CSPI01G07470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT67_CUCSA	5.9e-47	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043070 PE=3 SV=1	[more]
B9I4Y9_POPTR	7.2e-37	82.52	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s03380g PE=3 SV=2	[more]
A0A0S3TCF8_PHAAN	8.0e-36	79.41	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G214500 PE=...	[more]
W1PMW2_AMBTC	8.0e-36	83.00	Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00029p00039100 PE=3 SV=...	[more]
A0A0L9VHX6_PHAAN	1.0e-35	81.00	Eukaryotic translation initiation factor 3 subunit J OS=Phaseolus angularis GN=L...	[more]

BLAST of CSPI01G07470 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G26500.1	2.7e-27	63.64	chloroplast sulfur E	[more]
AT1G55805.1	2.6e-25	54.17	BolA-like family protein	[more]
AT5G17560.1	5.3e-07	36.90	BolA-like family protein	[more]
AT5G09830.1	1.6e-06	40.00	BolA-like family protein	[more]

BLAST of CSPI01G07470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209108\|gb\|KGN64204.1\|	8.5e-47	100.00	hypothetical protein Csa_1G043070 [Cucumis sativus]	[more]
gi\|743919336\|ref\|XP_011003692.1\|	1.6e-37	85.44	PREDICTED: sufE-like protein, chloroplastic [Populus euphratica]	[more]
gi\|1012173015\|ref\|XP_015966216.1\|	3.6e-37	82.69	PREDICTED: protein BOLA1, chloroplastic [Arachis duranensis]	[more]
gi\|566196591\|ref\|XP_002318341.2\|	1.0e-36	82.52	hypothetical protein POPTR_0012s03380g [Populus trichocarpa]	[more]
gi\|965617442\|dbj\|BAU02592.1\|	1.1e-35	79.41	hypothetical protein VIGAN_11214500 [Vigna angularis var. angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002634	BolA
IPR002634	BolA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003743	translation initiation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G07470.2	CSPI01G07470.2	mRNA
CSPI01G07470.1	CSPI01G07470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002634	BolA protein	PIR	PIRSF003113	BolA	coord: 1..102 score: 1.7
IPR002634	BolA protein	PFAM	PF01722	BolA	coord: 20..98 score: 1.2
IPR002634	BolA protein	unknown	SSF82657	BolA-like	coord: 11..99 score: 6.41
None	No IPR available	GENE3D	G3DSA:3.30.70.1500		coord: 12..95 score: 4.4
None	No IPR available	PANTHER	PTHR12735	BOLA-LIKE PROTEIN-RELATED	coord: 1..99 score: 4.6
None	No IPR available	PANTHER	PTHR12735:SF21	BOLA LIKE PROTEIN	coord: 1..99 score: 4.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G07470	Cla008389	Watermelon (97103) v1	cpiwmB042
CSPI01G07470	Csa1G043070	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G07470	MELO3C002161	Melon (DHL92) v3.5.1	cpimeB024
CSPI01G07470	ClCG01G014880	Watermelon (Charleston Gray)	cpiwcgB024
CSPI01G07470	Lsi02G002670	Bottle gourd (USVL1VR-Ls)	cpilsiB021
CSPI01G07470	MELO3C002161.2	Melon (DHL92) v3.6.1	cpimedB023
CSPI01G07470	CsaV3_1G007440	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G07470	Cla97C01G013900	Watermelon (97103) v2	cpiwmbB010
CSPI01G07470	Bhi08G001106	Wax gourd	cpiwgoB028
CSPI01G07470	Cucsa.122210	Cucumber (Gy14) v1	cgycpiB160
CSPI01G07470	Cp4.1LG09g10990	Cucurbita pepo (Zucchini)	cpecpiB025
CSPI01G07470	CsGy1G007340	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G07470	Carg06649	Silver-seed gourd	carcpiB0531

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G07470	Cucurbita maxima (Rimu)	cmacpiB394
CSPI01G07470	Cucurbita maxima (Rimu)	cmacpiB218
CSPI01G07470	Cucurbita moschata (Rifu)	cmocpiB204
CSPI01G07470	Cucurbita moschata (Rifu)	cmocpiB383
CSPI01G07470	Cucurbita pepo (Zucchini)	cpecpiB505
CSPI01G07470	Silver-seed gourd	carcpiB0418