Cla97C01G013900 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G013900
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	SufE-like protein 1 chloroplastic/mitochondrial
Location	Cla97Chr01 : 27724193 .. 27724501 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAAGAGGGGCAAACGTGGTGCTATCGAGGGCTAATAGGATGAAGACGAAGTTGCAATCAGCACTATCAGCGAGTTTTTTGGAAATCGAGGACGTTTCCCACCAACACGCTGGGCATGCGGCTGTGAAAGGCAGCGCTGGAGAAACACATTTCAATGTGAAGATTGTATCTCCAAAATTTGAAGGGCAGAGCCTCGTGAAGCGCCATAGAATGGTGTATGATGCGTTGGCTGAAGAGCTTCAGTCTGGACTGCATGCAATTTCGATAGTGGCAAAGACTCCCCAAGAAACTGGAGCAAAATGA

mRNA sequence

ATGGCTTCAAGAGGGGCAAACGTGGTGCTATCGAGGGCTAATAGGATGAAGACGAAGTTGCAATCAGCACTATCAGCGAGTTTTTTGGAAATCGAGGACGTTTCCCACCAACACGCTGGGCATGCGGCTGTGAAAGGCAGCGCTGGAGAAACACATTTCAATGTGAAGATTGTATCTCCAAAATTTGAAGGGCAGAGCCTCGTGAAGCGCCATAGAATGGTGTATGATGCGTTGGCTGAAGAGCTTCAGTCTGGACTGCATGCAATTTCGATAGTGGCAAAGACTCCCCAAGAAACTGGAGCAAAATGA

Coding sequence (CDS)

ATGGCTTCAAGAGGGGCAAACGTGGTGCTATCGAGGGCTAATAGGATGAAGACGAAGTTGCAATCAGCACTATCAGCGAGTTTTTTGGAAATCGAGGACGTTTCCCACCAACACGCTGGGCATGCGGCTGTGAAAGGCAGCGCTGGAGAAACACATTTCAATGTGAAGATTGTATCTCCAAAATTTGAAGGGCAGAGCCTCGTGAAGCGCCATAGAATGGTGTATGATGCGTTGGCTGAAGAGCTTCAGTCTGGACTGCATGCAATTTCGATAGTGGCAAAGACTCCCCAAGAAACTGGAGCAAAATGA

Protein sequence

MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK

Homology

[Close]

BLAST of Cla97C01G013900 vs. NCBI nr
Match: KGN64204.1 (hypothetical protein Csa_1G043070 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 5.1e-46
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60
           MASRGANVVLSRANRMKTKLQSALSAS LEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP
Sbjct: 1   MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60

Query: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 103
           KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK
Sbjct: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 102

[Close]

BLAST of Cla97C01G013900 vs. NCBI nr
Match: XP_022994950.1 (protein BOLA1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 185.7 bits (470), Expect = 8.1e-44
Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0


Query: 1   MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60
           MASRGANVVLSRANRMKTKLQSALSAS LEIEDVSHQHAGHA VKGS GETHFNVKIVSP
Sbjct: 1   MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSP 60

Query: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 103
            FEGQSLVKRHRMVYDALA+ELQSGLHAISIVAKTPQETGAK
Sbjct: 61  NFEGQSLVKRHRMVYDALADELQSGLHAISIVAKTPQETGAK 102

[Close]

BLAST of Cla97C01G013900 vs. NCBI nr
Match: XP_011003692.1 (PREDICTED: sufE-like protein, chloroplastic [Populus euphratica])

HSP 1 Score: 162.2 bits (409), Expect = 9.6e-37
Identity = 87/103 (84.47%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 1   MASRG-ANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKG-SAGETHFNVKIV 60
           M SRG AN+VLSRA+RMK KLQS+L AS LEIEDVSHQHAGHAAVKG +AGETHFNVKIV
Sbjct: 1   MGSRGVANMVLSRASRMKAKLQSSLEASLLEIEDVSHQHAGHAAVKGNTAGETHFNVKIV 60

Query: 61  SPKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGA 102
           SPKF+G +LVKRHR+VYDALAEELQSGLHA+SIVAKTPQE GA
Sbjct: 61  SPKFDGLNLVKRHRLVYDALAEELQSGLHALSIVAKTPQEEGA 103

[Close]

BLAST of Cla97C01G013900 vs. NCBI nr
Match: XP_015966216.1 (protein BOLA1, chloroplastic [Arachis duranensis] >XP_016203954.1 protein BOLA1, chloroplastic [Arachis ipaensis] >XP_025656411.1 protein BOLA1, chloroplastic-like [Arachis hypogaea])

HSP 1 Score: 161.8 bits (408), Expect = 1.3e-36
Identity = 87/104 (83.65%), Postives = 97/104 (93.27%), Query Frame = 0


Query: 1   MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKG-SAGETHFNVKIVS 60
           MASRGA+VVLSRANR+K+KLQ+AL A+ LE++DVS+QHAGHAAVKG S  ETHFNVKIVS
Sbjct: 1   MASRGASVVLSRANRIKSKLQTALEATVLEVDDVSYQHAGHAAVKGNSDNETHFNVKIVS 60

Query: 61  PKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQE-TGAK 103
           PKF+GQSLVKRHRMVYD LA+ELQSGLHAISIVAKTPQE TGAK
Sbjct: 61  PKFDGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETTGAK 104

[Close]

BLAST of Cla97C01G013900 vs. NCBI nr
Match: XP_019052544.1 (PREDICTED: protein BOLA1, chloroplastic [Nelumbo nucifera])

HSP 1 Score: 161.0 bits (406), Expect = 2.1e-36
Identity = 82/100 (82.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 1   MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60
           MASRG N + SRA+R+K KLQSAL AS LE+EDVS+QHAGHAAVKGS  ETHFNVKIVSP
Sbjct: 1   MASRGVNALASRASRIKHKLQSALEASVLEVEDVSYQHAGHAAVKGSTNETHFNVKIVSP 60

Query: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETG 101
           KF GQSLVKRHRMVYD L+EELQSGLHA+SIVAKTPQE G
Sbjct: 61  KFRGQSLVKRHRMVYDLLSEELQSGLHALSIVAKTPQEAG 100

[Close]

BLAST of Cla97C01G013900 vs. TrEMBL
Match: tr|A0A0A0LT67|A0A0A0LT67_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043070 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.4e-46
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60
           MASRGANVVLSRANRMKTKLQSALSAS LEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP
Sbjct: 1   MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60

Query: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 103
           KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK
Sbjct: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 102

[Close]

BLAST of Cla97C01G013900 vs. TrEMBL
Match: tr|A0A1U8Q145|A0A1U8Q145_NELNU (protein BOLA1, chloroplastic OS=Nelumbo nucifera OX=4432 GN=LOC104592056 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-36
Identity = 82/100 (82.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 1   MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60
           MASRG N + SRA+R+K KLQSAL AS LE+EDVS+QHAGHAAVKGS  ETHFNVKIVSP
Sbjct: 1   MASRGVNALASRASRIKHKLQSALEASVLEVEDVSYQHAGHAAVKGSTNETHFNVKIVSP 60

Query: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETG 101
           KF GQSLVKRHRMVYD L+EELQSGLHA+SIVAKTPQE G
Sbjct: 61  KFRGQSLVKRHRMVYDLLSEELQSGLHALSIVAKTPQEAG 100

[Close]

BLAST of Cla97C01G013900 vs. TrEMBL
Match: tr|A0A2I4DMM5|A0A2I4DMM5_9ROSI (protein BOLA1, chloroplastic OS=Juglans regia OX=51240 GN=LOC108981609 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.4e-36
Identity = 83/102 (81.37%), Postives = 93/102 (91.18%), Query Frame = 0


Query: 1   MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSA-GETHFNVKIVS 60
           M SRGAN+VLSRANRM+ KLQSAL A+ LEI+DVS+QHAGHAAV+G+A  ETHFNVKIVS
Sbjct: 1   MGSRGANLVLSRANRMRAKLQSALEATALEIDDVSYQHAGHAAVRGTADSETHFNVKIVS 60

Query: 61  PKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGA 102
           PKF GQSLVKRHR+VYDALA+ELQSGLHA+SIVAKTPQE  A
Sbjct: 61  PKFNGQSLVKRHRLVYDALADELQSGLHAVSIVAKTPQEAAA 102

[Close]

BLAST of Cla97C01G013900 vs. TrEMBL
Match: tr|A0A2K1Y8C7|A0A2K1Y8C7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G036800v3 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.1e-36
Identity = 84/103 (81.55%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 1   MASRG-ANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKG-SAGETHFNVKIV 60
           M SRG AN++LSRA+RMK KLQS+L AS LEIEDVSHQHAGHAA+KG +AGETHFNVKIV
Sbjct: 1   MGSRGVANMILSRASRMKAKLQSSLEASLLEIEDVSHQHAGHAAMKGNTAGETHFNVKIV 60

Query: 61  SPKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGA 102
           SPKF+G +LVKRHR+VYDAL+EELQSGLHA+SIVAKTPQE GA
Sbjct: 61  SPKFDGLNLVKRHRLVYDALSEELQSGLHALSIVAKTPQEEGA 103

[Close]

BLAST of Cla97C01G013900 vs. TrEMBL
Match: tr|A0A2G5CVZ0|A0A2G5CVZ0_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_03500069v1 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.0e-36
Identity = 80/100 (80.00%), Postives = 91/100 (91.00%), Query Frame = 0


Query: 1   MASRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60
           MASRGAN++ SRA+R+KTKLQSAL AS LE++DVS +HAGHAAVK +A ETHFNVKIVSP
Sbjct: 1   MASRGANILGSRASRIKTKLQSALEASILEVKDVSSEHAGHAAVKDNANETHFNVKIVSP 60

Query: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETG 101
           KF+GQSLVKRHRMVYD L EEL+SGLHA+SIVAKTPQE G
Sbjct: 61  KFDGQSLVKRHRMVYDLLGEELESGLHALSIVAKTPQEAG 100

[Close]

BLAST of Cla97C01G013900 vs. Swiss-Prot
Match: sp|Q84W65|SUFE1_ARATH (SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SUFE1 PE=1 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 4.0e-26
Identity = 63/99 (63.64%), Postives = 79/99 (79.80%), Query Frame = 0


Query: 5   GANVVL--SRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSA---GETHFNVKIVS 64
           G+NVV   SR  R++ KL+  L    LE+EDVS+QHAGHAAV+GSA   GETHFN++IVS
Sbjct: 272 GSNVVALGSRGMRIREKLEKELDPVELEVEDVSYQHAGHAAVRGSAGDDGETHFNLRIVS 331

Query: 65  PKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQE 99
             F+G+SLVKRHR++YD L +EL+SGLHA+SIVAKTP E
Sbjct: 332 DAFQGKSLVKRHRLIYDLLQDELKSGLHALSIVAKTPAE 370

[Close]

BLAST of Cla97C01G013900 vs. Swiss-Prot
Match: sp|Q682I1|BOLA1_ARATH (Protein BOLA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BOLA1 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 6.4e-24
Identity = 59/98 (60.20%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 6   ANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKG-SAGETHFNVKIVSPKFEG 65
           +  + +RA+RM+ KLQ  L    L IEDVS+QHAGHA +KG +  ETHFNVKIVS  FEG
Sbjct: 62  SGAIENRASRMREKLQKELEPVELVIEDVSYQHAGHAGMKGRTDDETHFNVKIVSKGFEG 121

Query: 66  QSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 103
            +LVKRHR+VY  L EEL +GLHA+SIV+KTP E+ +K
Sbjct: 122 MNLVKRHRLVYHLLREELDTGLHALSIVSKTPSESPSK 159

[Close]

BLAST of Cla97C01G013900 vs. Swiss-Prot
Match: sp|Q5RCE5|BOLA1_PONAB (BolA-like protein 1 OS=Pongo abelii OX=9601 GN=BOLA1 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 8.6e-13
Identity = 44/98 (44.90%), Postives = 62/98 (63.27%), Query Frame = 0


Query: 3   SRGANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKF 62
           S G+  V      ++TKL+ ALS   LE+ + S    GHA   GS  ETHF V +VS +F
Sbjct: 23  SAGSGAVGPVEAAIRTKLEQALSPEVLELRNES---GGHAVPPGS--ETHFRVAVVSSRF 82

Query: 63  EGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETG 101
           EG S ++RHR+++ ALAEEL   +HA++I A+TP + G
Sbjct: 83  EGLSPLQRHRLIHAALAEELAGPVHALAIQARTPAQWG 115

[Close]

BLAST of Cla97C01G013900 vs. Swiss-Prot
Match: sp|Q9D8S9|BOLA1_MOUSE (BolA-like protein 1 OS=Mus musculus OX=10090 GN=Bola1 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12
Identity = 40/83 (48.19%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 16  MKTKLQSALSASFLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKFEGQSLVKRHRMVY 75
           ++ KL+ ALS   LE+ + S    GHA   GS  ETHF V +VS +FEG S ++RHR+V+
Sbjct: 36  IRAKLEQALSPEVLELRNES---GGHAVPAGS--ETHFRVAVVSSRFEGMSPLQRHRLVH 95

Query: 76  DALAEELQSGLHAISIVAKTPQE 99
           +AL+EEL   +HA++I AKTP +
Sbjct: 96  EALSEELAGPVHALAIQAKTPAQ 113

[Close]

BLAST of Cla97C01G013900 vs. Swiss-Prot
Match: sp|Q3E793|BOL1_YEAST (BolA-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BOL1 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.5e-12
Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 0


Query: 35  SHQHAGHAAVKGS-AGETHFNVKIVSPKFEGQSLVKRHRMVYDALAEEL--QSGLHAISI 94
           SH+H GHA V+G+ + ETHF +++VS KFEG  L +RHRMVY  L +E+   +G+HA+ +
Sbjct: 38  SHKHKGHAGVQGNVSAETHFRIEMVSKKFEGLKLPQRHRMVYSLLQDEMAQANGIHALQL 97

Query: 95  VAKTPQETGAK 103
             KTPQE  +K
Sbjct: 98  SLKTPQEYESK 108

[Close]

BLAST of Cla97C01G013900 vs. TAIR10
Match: AT4G26500.1 (chloroplast sulfur E)

HSP 1 Score: 118.6 bits (296), Expect = 2.2e-27
Identity = 63/99 (63.64%), Postives = 79/99 (79.80%), Query Frame = 0


Query: 5   GANVVL--SRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSA---GETHFNVKIVS 64
           G+NVV   SR  R++ KL+  L    LE+EDVS+QHAGHAAV+GSA   GETHFN++IVS
Sbjct: 272 GSNVVALGSRGMRIREKLEKELDPVELEVEDVSYQHAGHAAVRGSAGDDGETHFNLRIVS 331

Query: 65  PKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQE 99
             F+G+SLVKRHR++YD L +EL+SGLHA+SIVAKTP E
Sbjct: 332 DAFQGKSLVKRHRLIYDLLQDELKSGLHALSIVAKTPAE 370

[Close]

BLAST of Cla97C01G013900 vs. TAIR10
Match: AT1G55805.1 (BolA-like family protein)

HSP 1 Score: 111.3 bits (277), Expect = 3.5e-25
Identity = 59/98 (60.20%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 6   ANVVLSRANRMKTKLQSALSASFLEIEDVSHQHAGHAAVKG-SAGETHFNVKIVSPKFEG 65
           +  + +RA+RM+ KLQ  L    L IEDVS+QHAGHA +KG +  ETHFNVKIVS  FEG
Sbjct: 62  SGAIENRASRMREKLQKELEPVELVIEDVSYQHAGHAGMKGRTDDETHFNVKIVSKGFEG 121

Query: 66  QSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 103
            +LVKRHR+VY  L EEL +GLHA+SIV+KTP E+ +K
Sbjct: 122 MNLVKRHRLVYHLLREELDTGLHALSIVSKTPSESPSK 159

[Close]

BLAST of Cla97C01G013900 vs. TAIR10
Match: AT5G17560.1 (BolA-like family protein)

HSP 1 Score: 50.8 bits (120), Expect = 5.7e-07
Identity = 31/84 (36.90%), Postives = 45/84 (53.57%), Query Frame = 0


Query: 16  MKTKLQSALSASFLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKFEGQSLVKRHRMVY 75
           M+ K++  L+A  + + D+            S    H  + +VS  FEGQS V R RMVY
Sbjct: 105 MELKIKEQLNAESVTVTDM------------SGDGRHVCINVVSSAFEGQSAVNRQRMVY 164

Query: 76  DALAEELQSGLHAI-SIVAKTPQE 99
            A+ EELQ+ +HA+  +  KTP E
Sbjct: 165 KAIWEELQNVVHAVDQMTTKTPSE 176

[Close]

BLAST of Cla97C01G013900 vs. TAIR10
Match: AT5G09830.1 (BolA-like family protein)

HSP 1 Score: 50.4 bits (119), Expect = 7.4e-07
Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 15 RMKTKLQSALSASFLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKFEGQSLVKRHRMV 74
          +++  L S L    LE+ D+S          G  G + F V++VS +FEG+ L++RHRMV
Sbjct: 6  QVEASLTSKLKPIHLEVIDIS----------GGCGSS-FEVEVVSEQFEGKRLLERHRMV 65

Query: 75 YDALAEELQSGLHAISI-VAKTPQE 99
            AL EE++  +HA+SI  A+TPQ+
Sbjct: 66 NAALEEEMKE-IHALSIKKAQTPQQ 78

The following BLAST results are available for this feature:

BLAST of Cla97C01G013900 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64204.1	5.1e-46	99.02	hypothetical protein Csa_1G043070 [Cucumis sativus]	[more]
XP_022994950.1	8.1e-44	95.10	protein BOLA1, chloroplastic [Cucurbita maxima]	[more]
XP_011003692.1	9.6e-37	84.47	PREDICTED: sufE-like protein, chloroplastic [Populus euphratica]	[more]
XP_015966216.1	1.3e-36	83.65	protein BOLA1, chloroplastic [Arachis duranensis] >XP_016203954.1 protein BOLA1,...	[more]
XP_019052544.1	2.1e-36	82.00	PREDICTED: protein BOLA1, chloroplastic [Nelumbo nucifera]	[more]

BLAST of Cla97C01G013900 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT67\|A0A0A0LT67_CUCSA	3.4e-46	99.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043070 PE=3 SV=1	[more]
tr\|A0A1U8Q145\|A0A1U8Q145_NELNU	1.4e-36	82.00	protein BOLA1, chloroplastic OS=Nelumbo nucifera OX=4432 GN=LOC104592056 PE=3 SV...	[more]
tr\|A0A2I4DMM5\|A0A2I4DMM5_9ROSI	2.4e-36	81.37	protein BOLA1, chloroplastic OS=Juglans regia OX=51240 GN=LOC108981609 PE=3 SV=1	[more]
tr\|A0A2K1Y8C7\|A0A2K1Y8C7_POPTR	4.1e-36	81.55	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G036800v3 PE=...	[more]
tr\|A0A2G5CVZ0\|A0A2G5CVZ0_AQUCA	7.0e-36	80.00	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_03500069v1 PE=3...	[more]

BLAST of Cla97C01G013900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84W65\|SUFE1_ARATH	4.0e-26	63.64	SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q682I1\|BOLA1_ARATH	6.4e-24	60.20	Protein BOLA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BOLA1 PE=1 SV=1	[more]
sp\|Q5RCE5\|BOLA1_PONAB	8.6e-13	44.90	BolA-like protein 1 OS=Pongo abelii OX=9601 GN=BOLA1 PE=2 SV=1	[more]
sp\|Q9D8S9\|BOLA1_MOUSE	1.5e-12	48.19	BolA-like protein 1 OS=Mus musculus OX=10090 GN=Bola1 PE=1 SV=1	[more]
sp\|Q3E793\|BOL1_YEAST	2.5e-12	50.70	BolA-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=...	[more]

BLAST of Cla97C01G013900 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G26500.1	2.2e-27	63.64	chloroplast sulfur E	[more]
AT1G55805.1	3.5e-25	60.20	BolA-like family protein	[more]
AT5G17560.1	5.7e-07	36.90	BolA-like family protein	[more]
AT5G09830.1	7.4e-07	40.00	BolA-like family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036065	BolA-like_sf
IPR002634	BolA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
biological_process	GO:0043085	positive regulation of catalytic activity
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009536	plastid
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0008047	enzyme activator activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G013900.1	Cla97C01G013900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002634	BolA protein	PFAM	PF01722	BolA	coord: 20..98 e-value: 3.2E-32 score: 110.5
IPR002634	BolA protein	PIRSF	PIRSF003113	BolA	coord: 1..102 e-value: 7.7E-35 score: 117.5
IPR002634	BolA protein	PANTHER	PTHR12735	BOLA-LIKE PROTEIN-RELATED	coord: 1..101
None	No IPR available	GENE3D	G3DSA:3.30.300.90		coord: 10..102 e-value: 5.0E-37 score: 128.0
None	No IPR available	PANTHER	PTHR12735:SF21	PROTEIN BOLA1, CHLOROPLASTIC	coord: 1..101
IPR036065	BolA-like superfamily	SUPERFAMILY	SSF82657	BolA-like	coord: 11..99

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G013900	Cla008389	Watermelon (97103) v1	wmwmbB244
Cla97C01G013900	Csa1G043070	Cucumber (Chinese Long) v2	cuwmbB010
Cla97C01G013900	MELO3C002161	Melon (DHL92) v3.5.1	mewmbB133
Cla97C01G013900	ClCG01G014880	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G013900	CSPI01G07470	Wild cucumber (PI 183967)	cpiwmbB010
Cla97C01G013900	Cucsa.122210	Cucumber (Gy14) v1	cgywmbB185
Cla97C01G013900	Lsi02G002670	Bottle gourd (USVL1VR-Ls)	lsiwmbB158
Cla97C01G013900	CsGy1G007340	Cucumber (Gy14) v2	cgybwmbB010
Cla97C01G013900	MELO3C002161.2	Melon (DHL92) v3.6.1	medwmbB125
Cla97C01G013900	Carg06649	Silver-seed gourd	carwmbB0516
Cla97C01G013900	CsaV3_1G007440	Cucumber (Chinese Long) v3	cucwmbB009
Cla97C01G013900	Bhi08G001106	Wax gourd	wgowmbB457

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G013900	Silver-seed gourd	carwmbB0406
Cla97C01G013900	Cucurbita maxima (Rimu)	cmawmbB207
Cla97C01G013900	Cucurbita maxima (Rimu)	cmawmbB399
Cla97C01G013900	Cucurbita moschata (Rifu)	cmowmbB191
Cla97C01G013900	Cucurbita moschata (Rifu)	cmowmbB383