CsaV3_1G007440 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G007440
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	BolA protein
Location	chr1 : 4735507 .. 4737835 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATTTTATGAGTTTTAAAAATTGTGCTGCTTTTACCGATTTACCAAAAATTTAGATTTACTTCTCACTCCTCAACACTGCTTACAAAGACGAAAGGTTCGTGCCGAATTTGCGTCGCATTGAAGCAGGGCATTTCCAACGGCCGGTCGTCTCCGAACGTCGAGGGGGCTGTTTCGTGTAACGCCGGTCAGTACTACGCGTCAATCAACAATATTTATTCTCATAATTTTTCAATGATGTCTCATCAATTTTCGAATTTGCTCTTCCCCTAGTTCGTTCGTTGATGATAAATTCTTTTGTTATTCGAATCAGAACTGAGAAATGTAAAATATAGATTCTACAATTTTACCATTGAATCATTCAATTCTCTGAAACTGTGTCTTCTTAAGGATGCAAATTTTGTAATTCGAAAAACAGGAATCGCAGGGGATCGTTCAGACATTTTATCGAACAGTATGGCTTCACGAGGGGCAAACGTGGTGCTATCGAGGGCTAATAGAATGAAGACGAAGTTGCAGTCAGCACTATCAGCGAGTTTATTGGAAATTGAGGACGTTTCGCACCAGCATGCTGGGCATGCGGCTGTGAAAGGCAGCGCTGGAGAGACTCATTTCAATGTGAAGATTGTGTCTCCAAAATTTGAAGGGCAGAGCCTTGTGAAGCGCCATAGAATGGTGTATGATGCTTTGGCTGAAGAGCTTCAATCTGGGTTACATGCAATTTCAATAGTGGCAAAAACTCCACAAGAAACTGGAGCAAAATGATTTTCAGATTCGCCTCACAATGTGAGTTTTCAAATGATTTCTATAGTTTAGAATTGCAATGATTTAGGCATTTATGCTGGGTCTTGTATGATGTATATGCTACTTATCAATTTCAAGAGATGAGTTAAAGCTTTAAATGCCATGGAAAATTTTTTCAGCTTGTTAATTACAACTGGGAAGACACTGTATTGTAGGATAAATGCTGCTCAAAGAAAAAAAGATACATTTTCACTTATTAGATGCCTTGATTGTGGTGCTTCTATCATATTTGACTAGATTTGTTATTTTAGACTAGTTCTTATTCAACTGAATTGACTTATCTTGGATCTAAAAGTACACTATTTTGTTTTATTTTCTTTATGCATATAACATTTTCATTATAATACATGTTCTTCGATTAAAGTTCAACCCATGCCTGCAATAGTGAGGAGTAGTAGAAATTTAACTTGATTAGTTGTTTGTAATTTCACTTCAAAAGCTTCCTTTCTACTAGAGCTTGATCTAAATTCATATGTTTCAACCACTGTTATCTGTCATCTTTCATGAAACAGACTCATTTACCACTCACGAATGACTTATCATATTGAGAATCTATTACTCCAAACTTACGATGCAAAATCGACCTTACTTGAACATGATCTATTCTATAAGTTGTATAATTGTGTTCTTGAGTTCATCTAAATACGGGTTCATGTGATGGTCACAATTTAATCCACTTGGATAATATTTTTGTCATGTTGAAACCTATTACTCCCTCATTGACAGTGCATAAACATCTAGTAAGCATCTAAATAATGATTCATGTGATTTGTCACCTGTTCACTTCACTGAAACAGTATCATGAAATTCATCTATAAATAACTTGTCATATTGGAAATTTGTTACTCCACCCATTATGTGACAAATAGTAAGGATTCAAATAAGGGTTCGTGTAACGGTTACACAAGGTAATCTTCTAAAGGCCAAATTCCATGATTAGCACATGTAGAATCGAATACCTTCATGCATCATCATTGAAATCTCCCTCGATTACATACCTTATCAAAAAGATCTATTCTGTGCTTAAACATCAATTTGCTCCCATTTTAAGTCTCAAATGTTGGATTTTCTTTTTATCGTGCAGAGTGGGCCAAATTGTGAAGCCAAGAAAGGAGGAGTGAACTTTACCTCTCAACTCATAGGAATTTCGAAAATGTATGTGTATACTCGAGGTTGTTGTCTTTCTAATTTGTTCTCCAAAAAAATGTTAAAGACCAAATACATTGTGGCTCCTTACAAATACTTCTAGCTTTGCTGCTCTCCCTTGATTATAAAGATAGACTTCATGTCTTGAGTTGATTCTGAATTTAGGTACTAACCTTGCAAGTGCCTTGTTTAAGTTCCCT

mRNA sequence

ATGGCTTCACGAGGGGCAAACGTGGTGCTATCGAGGGCTAATAGAATGAAGACGAAGTTGCAGTCAGCACTATCAGCGAGTTTATTGGAAATTGAGGACGTTTCGCACCAGCATGCTGGGCATGCGGCTGTGAAAGGCAGCGCTGGAGAGACTCATTTCAATGTGAAGATTGTGTCTCCAAAATTTGAAGGGCAGAGCCTTGTGAAGCGCCATAGAATGGTGTATGATGCTTTGGCTGAAGAGCTTCAATCTGGGTTACATGCAATTTCAATAGTGGCAAAAACTCCACAAGAAACTGGAGCAAAATGA

Coding sequence (CDS)

ATGGCTTCACGAGGGGCAAACGTGGTGCTATCGAGGGCTAATAGAATGAAGACGAAGTTGCAGTCAGCACTATCAGCGAGTTTATTGGAAATTGAGGACGTTTCGCACCAGCATGCTGGGCATGCGGCTGTGAAAGGCAGCGCTGGAGAGACTCATTTCAATGTGAAGATTGTGTCTCCAAAATTTGAAGGGCAGAGCCTTGTGAAGCGCCATAGAATGGTGTATGATGCTTTGGCTGAAGAGCTTCAATCTGGGTTACATGCAATTTCAATAGTGGCAAAAACTCCACAAGAAACTGGAGCAAAATGA

Protein sequence

MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK

Homology

[Close]

BLAST of CsaV3_1G007440 vs. NCBI nr
Match: KGN64204.1 (hypothetical protein Csa_1G043070 [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 1.3e-46
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60
           MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP
Sbjct: 1   MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60

Query: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 103
           KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK
Sbjct: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 102

[Close]

BLAST of CsaV3_1G007440 vs. NCBI nr
Match: XP_022994950.1 (protein BOLA1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 186.8 bits (473), Expect = 3.7e-44
Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 0


Query: 1   MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60
           MASRGANVVLSRANRMKTKLQSALSAS+LEIEDVSHQHAGHA VKGS GETHFNVKIVSP
Sbjct: 1   MASRGANVVLSRANRMKTKLQSALSASVLEIEDVSHQHAGHAGVKGSDGETHFNVKIVSP 60

Query: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 103
            FEGQSLVKRHRMVYDALA+ELQSGLHAISIVAKTPQETGAK
Sbjct: 61  NFEGQSLVKRHRMVYDALADELQSGLHAISIVAKTPQETGAK 102

[Close]

BLAST of CsaV3_1G007440 vs. NCBI nr
Match: XP_011003692.1 (PREDICTED: sufE-like protein, chloroplastic [Populus euphratica])

HSP 1 Score: 163.7 bits (413), Expect = 3.3e-37
Identity = 88/103 (85.44%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 1   MASRG-ANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKG-SAGETHFNVKIV 60
           M SRG AN+VLSRA+RMK KLQS+L ASLLEIEDVSHQHAGHAAVKG +AGETHFNVKIV
Sbjct: 1   MGSRGVANMVLSRASRMKAKLQSSLEASLLEIEDVSHQHAGHAAVKGNTAGETHFNVKIV 60

Query: 61  SPKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGA 102
           SPKF+G +LVKRHR+VYDALAEELQSGLHA+SIVAKTPQE GA
Sbjct: 61  SPKFDGLNLVKRHRLVYDALAEELQSGLHALSIVAKTPQEEGA 103

[Close]

BLAST of CsaV3_1G007440 vs. NCBI nr
Match: XP_015966216.1 (protein BOLA1, chloroplastic [Arachis duranensis] >XP_016203954.1 protein BOLA1, chloroplastic [Arachis ipaensis] >XP_025656411.1 protein BOLA1, chloroplastic-like [Arachis hypogaea])

HSP 1 Score: 162.9 bits (411), Expect = 5.7e-37
Identity = 87/104 (83.65%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 1   MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKG-SAGETHFNVKIVS 60
           MASRGA+VVLSRANR+K+KLQ+AL A++LE++DVS+QHAGHAAVKG S  ETHFNVKIVS
Sbjct: 1   MASRGASVVLSRANRIKSKLQTALEATVLEVDDVSYQHAGHAAVKGNSDNETHFNVKIVS 60

Query: 61  PKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQE-TGAK 103
           PKF+GQSLVKRHRMVYD LA+ELQSGLHAISIVAKTPQE TGAK
Sbjct: 61  PKFDGQSLVKRHRMVYDLLADELQSGLHAISIVAKTPQETTGAK 104

[Close]

BLAST of CsaV3_1G007440 vs. NCBI nr
Match: XP_019052544.1 (PREDICTED: protein BOLA1, chloroplastic [Nelumbo nucifera])

HSP 1 Score: 161.8 bits (408), Expect = 1.3e-36
Identity = 82/100 (82.00%), Postives = 90/100 (90.00%), Query Frame = 0


Query: 1   MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60
           MASRG N + SRA+R+K KLQSAL AS+LE+EDVS+QHAGHAAVKGS  ETHFNVKIVSP
Sbjct: 1   MASRGVNALASRASRIKHKLQSALEASVLEVEDVSYQHAGHAAVKGSTNETHFNVKIVSP 60

Query: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETG 101
           KF GQSLVKRHRMVYD L+EELQSGLHA+SIVAKTPQE G
Sbjct: 61  KFRGQSLVKRHRMVYDLLSEELQSGLHALSIVAKTPQEAG 100

[Close]

BLAST of CsaV3_1G007440 vs. TAIR10
Match: AT4G26500.1 (chloroplast sulfur E)

HSP 1 Score: 119.0 bits (297), Expect = 1.7e-27
Identity = 63/99 (63.64%), Postives = 79/99 (79.80%), Query Frame = 0


Query: 5   GANVVL--SRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSA---GETHFNVKIVS 64
           G+NVV   SR  R++ KL+  L    LE+EDVS+QHAGHAAV+GSA   GETHFN++IVS
Sbjct: 272 GSNVVALGSRGMRIREKLEKELDPVELEVEDVSYQHAGHAAVRGSAGDDGETHFNLRIVS 331

Query: 65  PKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQE 99
             F+G+SLVKRHR++YD L +EL+SGLHA+SIVAKTP E
Sbjct: 332 DAFQGKSLVKRHRLIYDLLQDELKSGLHALSIVAKTPAE 370

[Close]

BLAST of CsaV3_1G007440 vs. TAIR10
Match: AT1G55805.1 (BolA-like family protein)

HSP 1 Score: 111.7 bits (278), Expect = 2.7e-25
Identity = 59/98 (60.20%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 6   ANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKG-SAGETHFNVKIVSPKFEG 65
           +  + +RA+RM+ KLQ  L    L IEDVS+QHAGHA +KG +  ETHFNVKIVS  FEG
Sbjct: 62  SGAIENRASRMREKLQKELEPVELVIEDVSYQHAGHAGMKGRTDDETHFNVKIVSKGFEG 121

Query: 66  QSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 103
            +LVKRHR+VY  L EEL +GLHA+SIV+KTP E+ +K
Sbjct: 122 MNLVKRHRLVYHLLREELDTGLHALSIVSKTPSESPSK 159

[Close]

BLAST of CsaV3_1G007440 vs. TAIR10
Match: AT5G17560.1 (BolA-like family protein)

HSP 1 Score: 51.2 bits (121), Expect = 4.4e-07
Identity = 31/84 (36.90%), Postives = 45/84 (53.57%), Query Frame = 0


Query: 16  MKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKFEGQSLVKRHRMVY 75
           M+ K++  L+A  + + D+            S    H  + +VS  FEGQS V R RMVY
Sbjct: 105 MELKIKEQLNAESVTVTDM------------SGDGRHVCINVVSSAFEGQSAVNRQRMVY 164

Query: 76  DALAEELQSGLHAI-SIVAKTPQE 99
            A+ EELQ+ +HA+  +  KTP E
Sbjct: 165 KAIWEELQNVVHAVDQMTTKTPSE 176

[Close]

BLAST of CsaV3_1G007440 vs. TAIR10
Match: AT5G09830.1 (BolA-like family protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.3e-06
Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 15 RMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKFEGQSLVKRHRMV 74
          +++  L S L    LE+ D+S          G  G + F V++VS +FEG+ L++RHRMV
Sbjct: 6  QVEASLTSKLKPIHLEVIDIS----------GGCGSS-FEVEVVSEQFEGKRLLERHRMV 65

Query: 75 YDALAEELQSGLHAISI-VAKTPQE 99
            AL EE++  +HA+SI  A+TPQ+
Sbjct: 66 NAALEEEMKE-IHALSIKKAQTPQQ 78

[Close]

BLAST of CsaV3_1G007440 vs. Swiss-Prot
Match: sp|Q84W65|SUFE1_ARATH (SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SUFE1 PE=1 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 3.1e-26
Identity = 63/99 (63.64%), Postives = 79/99 (79.80%), Query Frame = 0


Query: 5   GANVVL--SRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSA---GETHFNVKIVS 64
           G+NVV   SR  R++ KL+  L    LE+EDVS+QHAGHAAV+GSA   GETHFN++IVS
Sbjct: 272 GSNVVALGSRGMRIREKLEKELDPVELEVEDVSYQHAGHAAVRGSAGDDGETHFNLRIVS 331

Query: 65  PKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQE 99
             F+G+SLVKRHR++YD L +EL+SGLHA+SIVAKTP E
Sbjct: 332 DAFQGKSLVKRHRLIYDLLQDELKSGLHALSIVAKTPAE 370

[Close]

BLAST of CsaV3_1G007440 vs. Swiss-Prot
Match: sp|Q682I1|BOLA1_ARATH (Protein BOLA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BOLA1 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 4.9e-24
Identity = 59/98 (60.20%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 6   ANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKG-SAGETHFNVKIVSPKFEG 65
           +  + +RA+RM+ KLQ  L    L IEDVS+QHAGHA +KG +  ETHFNVKIVS  FEG
Sbjct: 62  SGAIENRASRMREKLQKELEPVELVIEDVSYQHAGHAGMKGRTDDETHFNVKIVSKGFEG 121

Query: 66  QSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 103
            +LVKRHR+VY  L EEL +GLHA+SIV+KTP E+ +K
Sbjct: 122 MNLVKRHRLVYHLLREELDTGLHALSIVSKTPSESPSK 159

[Close]

BLAST of CsaV3_1G007440 vs. Swiss-Prot
Match: sp|Q5RCE5|BOLA1_PONAB (BolA-like protein 1 OS=Pongo abelii OX=9601 GN=BOLA1 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.1e-13
Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 3   SRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKF 62
           S G+  V      ++TKL+ ALS  +LE+ + S    GHA   GS  ETHF V +VS +F
Sbjct: 23  SAGSGAVGPVEAAIRTKLEQALSPEVLELRNES---GGHAVPPGS--ETHFRVAVVSSRF 82

Query: 63  EGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETG 101
           EG S ++RHR+++ ALAEEL   +HA++I A+TP + G
Sbjct: 83  EGLSPLQRHRLIHAALAEELAGPVHALAIQARTPAQWG 115

[Close]

BLAST of CsaV3_1G007440 vs. Swiss-Prot
Match: sp|Q9D8S9|BOLA1_MOUSE (BolA-like protein 1 OS=Mus musculus OX=10090 GN=Bola1 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 6.7e-13
Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = 0


Query: 16  MKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSPKFEGQSLVKRHRMVY 75
           ++ KL+ ALS  +LE+ + S    GHA   GS  ETHF V +VS +FEG S ++RHR+V+
Sbjct: 36  IRAKLEQALSPEVLELRNES---GGHAVPAGS--ETHFRVAVVSSRFEGMSPLQRHRLVH 95

Query: 76  DALAEELQSGLHAISIVAKTPQE 99
           +AL+EEL   +HA++I AKTP +
Sbjct: 96  EALSEELAGPVHALAIQAKTPAQ 113

[Close]

BLAST of CsaV3_1G007440 vs. Swiss-Prot
Match: sp|Q3E793|BOL1_YEAST (BolA-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BOL1 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12
Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 0


Query: 35  SHQHAGHAAVKGS-AGETHFNVKIVSPKFEGQSLVKRHRMVYDALAEEL--QSGLHAISI 94
           SH+H GHA V+G+ + ETHF +++VS KFEG  L +RHRMVY  L +E+   +G+HA+ +
Sbjct: 38  SHKHKGHAGVQGNVSAETHFRIEMVSKKFEGLKLPQRHRMVYSLLQDEMAQANGIHALQL 97

Query: 95  VAKTPQETGAK 103
             KTPQE  +K
Sbjct: 98  SLKTPQEYESK 108

[Close]

BLAST of CsaV3_1G007440 vs. TrEMBL
Match: tr|A0A0A0LT67|A0A0A0LT67_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043070 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 8.9e-47
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 1   MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60
           MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP
Sbjct: 1   MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60

Query: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 103
           KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK
Sbjct: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGAK 102

[Close]

BLAST of CsaV3_1G007440 vs. TrEMBL
Match: tr|A0A1U8Q145|A0A1U8Q145_NELNU (protein BOLA1, chloroplastic OS=Nelumbo nucifera OX=4432 GN=LOC104592056 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 8.4e-37
Identity = 82/100 (82.00%), Postives = 90/100 (90.00%), Query Frame = 0


Query: 1   MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60
           MASRG N + SRA+R+K KLQSAL AS+LE+EDVS+QHAGHAAVKGS  ETHFNVKIVSP
Sbjct: 1   MASRGVNALASRASRIKHKLQSALEASVLEVEDVSYQHAGHAAVKGSTNETHFNVKIVSP 60

Query: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETG 101
           KF GQSLVKRHRMVYD L+EELQSGLHA+SIVAKTPQE G
Sbjct: 61  KFRGQSLVKRHRMVYDLLSEELQSGLHALSIVAKTPQEAG 100

[Close]

BLAST of CsaV3_1G007440 vs. TrEMBL
Match: tr|A0A2K1Y8C7|A0A2K1Y8C7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G036800v3 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-36
Identity = 85/103 (82.52%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 1   MASRG-ANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKG-SAGETHFNVKIV 60
           M SRG AN++LSRA+RMK KLQS+L ASLLEIEDVSHQHAGHAA+KG +AGETHFNVKIV
Sbjct: 1   MGSRGVANMILSRASRMKAKLQSSLEASLLEIEDVSHQHAGHAAMKGNTAGETHFNVKIV 60

Query: 61  SPKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGA 102
           SPKF+G +LVKRHR+VYDAL+EELQSGLHA+SIVAKTPQE GA
Sbjct: 61  SPKFDGLNLVKRHRLVYDALSEELQSGLHALSIVAKTPQEEGA 103

[Close]

BLAST of CsaV3_1G007440 vs. TrEMBL
Match: tr|A0A2I4DMM5|A0A2I4DMM5_9ROSI (protein BOLA1, chloroplastic OS=Juglans regia OX=51240 GN=LOC108981609 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.9e-36
Identity = 83/102 (81.37%), Postives = 93/102 (91.18%), Query Frame = 0


Query: 1   MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSA-GETHFNVKIVS 60
           M SRGAN+VLSRANRM+ KLQSAL A+ LEI+DVS+QHAGHAAV+G+A  ETHFNVKIVS
Sbjct: 1   MGSRGANLVLSRANRMRAKLQSALEATALEIDDVSYQHAGHAAVRGTADSETHFNVKIVS 60

Query: 61  PKFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETGA 102
           PKF GQSLVKRHR+VYDALA+ELQSGLHA+SIVAKTPQE  A
Sbjct: 61  PKFNGQSLVKRHRLVYDALADELQSGLHAVSIVAKTPQEAAA 102

[Close]

BLAST of CsaV3_1G007440 vs. TrEMBL
Match: tr|A0A2U1LMR1|A0A2U1LMR1_ARTAN (BolA protein OS=Artemisia annua OX=35608 GN=CTI12_AA474660 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.2e-36
Identity = 80/100 (80.00%), Postives = 92/100 (92.00%), Query Frame = 0


Query: 1   MASRGANVVLSRANRMKTKLQSALSASLLEIEDVSHQHAGHAAVKGSAGETHFNVKIVSP 60
           M SRGANV+LSRA+R+KTKLQS L A LLE+EDVS+QHAGHAAVK +A ETHFNVK+VS 
Sbjct: 1   MGSRGANVLLSRASRIKTKLQSVLEAKLLEVEDVSYQHAGHAAVKDNANETHFNVKVVSG 60

Query: 61  KFEGQSLVKRHRMVYDALAEELQSGLHAISIVAKTPQETG 101
           KF+GQ+LVKRHRMVYDALA+EL+SGLHAISIVAKTP+E G
Sbjct: 61  KFDGQNLVKRHRMVYDALADELESGLHAISIVAKTPKEAG 100

The following BLAST results are available for this feature:

BLAST of CsaV3_1G007440 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64204.1	1.3e-46	100.00	hypothetical protein Csa_1G043070 [Cucumis sativus]	[more]
XP_022994950.1	3.7e-44	95.10	protein BOLA1, chloroplastic [Cucurbita maxima]	[more]
XP_011003692.1	3.3e-37	85.44	PREDICTED: sufE-like protein, chloroplastic [Populus euphratica]	[more]
XP_015966216.1	5.7e-37	83.65	protein BOLA1, chloroplastic [Arachis duranensis] >XP_016203954.1 protein BOLA1,...	[more]
XP_019052544.1	1.3e-36	82.00	PREDICTED: protein BOLA1, chloroplastic [Nelumbo nucifera]	[more]

BLAST of CsaV3_1G007440 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G26500.1	1.7e-27	63.64	chloroplast sulfur E	[more]
AT1G55805.1	2.7e-25	60.20	BolA-like family protein	[more]
AT5G17560.1	4.4e-07	36.90	BolA-like family protein	[more]
AT5G09830.1	1.3e-06	40.00	BolA-like family protein	[more]

BLAST of CsaV3_1G007440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84W65\|SUFE1_ARATH	3.1e-26	63.64	SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q682I1\|BOLA1_ARATH	4.9e-24	60.20	Protein BOLA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BOLA1 PE=1 SV=1	[more]
sp\|Q5RCE5\|BOLA1_PONAB	5.1e-13	44.90	BolA-like protein 1 OS=Pongo abelii OX=9601 GN=BOLA1 PE=2 SV=1	[more]
sp\|Q9D8S9\|BOLA1_MOUSE	6.7e-13	48.19	BolA-like protein 1 OS=Mus musculus OX=10090 GN=Bola1 PE=1 SV=1	[more]
sp\|Q3E793\|BOL1_YEAST	1.5e-12	50.70	BolA-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=...	[more]

BLAST of CsaV3_1G007440 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT67\|A0A0A0LT67_CUCSA	8.9e-47	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043070 PE=3 SV=1	[more]
tr\|A0A1U8Q145\|A0A1U8Q145_NELNU	8.4e-37	82.00	protein BOLA1, chloroplastic OS=Nelumbo nucifera OX=4432 GN=LOC104592056 PE=3 SV...	[more]
tr\|A0A2K1Y8C7\|A0A2K1Y8C7_POPTR	1.4e-36	82.52	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G036800v3 PE=...	[more]
tr\|A0A2I4DMM5\|A0A2I4DMM5_9ROSI	1.9e-36	81.37	protein BOLA1, chloroplastic OS=Juglans regia OX=51240 GN=LOC108981609 PE=3 SV=1	[more]
tr\|A0A2U1LMR1\|A0A2U1LMR1_ARTAN	4.2e-36	80.00	BolA protein OS=Artemisia annua OX=35608 GN=CTI12_AA474660 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036065	BolA-like_sf
IPR002634	BolA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003743	translation initiation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G007440.1	CsaV3_1G007440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002634	BolA protein	PIRSF	PIRSF003113	BolA	coord: 1..102 e-value: 2.1E-34 score: 116.1
IPR002634	BolA protein	PFAM	PF01722	BolA	coord: 20..98 e-value: 6.9E-32 score: 109.5
IPR002634	BolA protein	PANTHER	PTHR12735	BOLA-LIKE PROTEIN-RELATED	coord: 1..101
None	No IPR available	GENE3D	G3DSA:3.30.300.90		coord: 10..102 e-value: 7.1E-37 score: 127.5
None	No IPR available	PANTHER	PTHR12735:SF21	PROTEIN BOLA1, CHLOROPLASTIC	coord: 1..101
IPR036065	BolA-like superfamily	SUPERFAMILY	SSF82657	BolA-like	coord: 11..99

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G007440	CSPI01G07470	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G007440	Cucsa.122210	Cucumber (Gy14) v1	cgycucB163
CsaV3_1G007440	Cp4.1LG09g10990	Cucurbita pepo (Zucchini)	cpecucB0031
CsaV3_1G007440	CsGy1G007340	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G007440	Carg06649	Silver-seed gourd	carcucB0529
CsaV3_1G007440	Cla008389	Watermelon (97103) v1	cucwmB048
CsaV3_1G007440	MELO3C002161	Melon (DHL92) v3.5.1	cucmeB024
CsaV3_1G007440	ClCG01G014880	Watermelon (Charleston Gray)	cucwcgB023
CsaV3_1G007440	Lsi02G002670	Bottle gourd (USVL1VR-Ls)	cuclsiB022
CsaV3_1G007440	MELO3C002161.2	Melon (DHL92) v3.6.1	cucmedB022
CsaV3_1G007440	Cla97C01G013900	Watermelon (97103) v2	cucwmbB009
CsaV3_1G007440	Bhi08G001106	Wax gourd	cucwgoB031

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G007440	Silver-seed gourd	carcucB0418
CsaV3_1G007440	Cucurbita maxima (Rimu)	cmacucB0248
CsaV3_1G007440	Cucurbita maxima (Rimu)	cmacucB0464
CsaV3_1G007440	Cucurbita moschata (Rifu)	cmocucB0234
CsaV3_1G007440	Cucurbita moschata (Rifu)	cmocucB0457
CsaV3_1G007440	Cucurbita pepo (Zucchini)	cpecucB0623