CsGy1G005020 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGATCCATATTCAGGGGCGAAAGGAGGTAGGCTCACCTTCAAGGGAGGAGTCTTAGCCTCTCGTAGCAAGGATATTGACAAGAAGAAGAAGAAGAAGAAGAAAGACAAAAGTAAGACCGACGAGAACCCCACGGACGATGGCGAGATTTTGACATCGGCTGATGGTGTAGAAGATGGAGACGGAGCAATGTATACTATTGACGCGGCTAAGCGTATGAAGTACGAGGAGCTATTTCCTGTGGAGACAAGGAAGTTTGGTTACGACCCTAACAACTCCAATACCAAGTTCAAGTCCGTGGAGGATGCTCTCGATGACCGTGTCAAAAAGAAGGCGGATCGTTATTGTAAATAATCAGGTTACAGCTCTTGCTTTTTTGCTTTAGTTTGTCTCTGCATTCACTCTTGCAATTCAATAGACGCAGTTTGTATTTCCTGCTTGATTTTGATGGATACTTCAGCTCTGATTTTCAATTAGACCCGCAAAATGTTTAGGGCATTGAGCATATTAGGTTAAGTGTTGGCTTCTGACGAAAGAAATGTTTGTCCATAGACTCGGAGAACATCCGAATTTAGTTAGGGTATTCTCTTTTATTTTTTCTCTCTTCTACATTTGCCTCTTTCAAGAATCCTTGATTCAATACGCGTAGGAAGGAATTTGTTACACGGTCCCTTTGGTAGCTACTGAATTTTCCTCTAGTCTTATATTGCTGGAGAACCGGAAGTTGAATCTGAACTAGCGAATTTCTGGTCCACTCCTAAAGAAAGGCCAAGGAATATGTAGTCTTATACCGTCAGCATATTATCTTGATAGTAGTTTTGCATACTCATTTTGTATTTTTAGTTCCCAGCTGTTCATACTTCATTTATTATCAAGGCTGCATTCTATCTGTTCCCTTTTGAAAGAAACTATGCTTGTTTCCATCCAAGCACAAAGGCAAGGCAGTTCAGGTATCTAACTATATTCCAGAGGGGTTGGAGAATAAAAGAATTTGGAAATTGGTCCTCCAACGTGTTAATTTTTAAGACAAGGTAGAATTGTGCTATTCATTTGTGAATGCTAGCAGTAGAGTAATATAGGTTTAGGCAAGGCAGTGGAGATATAAGCCCGGATTATAAAGGTCTCTGAGTTGTTAGTAACTAGCATATACGGTTATATAACACATATCCTCTACAAATGCCATAAGGTGGAGTGGCCCTCAGTGGATCTCTTGCCCAACCGGCTGGAAGTCCTCATATTTATCTGCAGAGTCTATTATCACCTTCTAGATTCATCAGTACTGTAGTGTGCCCCAATAACATTTGTTGGATTATTTTTAACCTAGTCTCAAATGTTGGAGATGGGCAAGTTCTGGACACCTAAACCGGTCTCTCGCTTTCTCTGTCTTCTGGGGAGAACACGTTTATGGCCAGCCTTTGCCTATGAACTATGGGGAGAAATGCTTAGGCATATGTTAGTTACCTTCTTGATATGATAAGCTGATTTAGGAAAGTTAATTCATGTTAGGCATACGCATAGCCAGAGGCACCAAGAAAAAAAGGAGAGAGTAGCCTCTGATCATAGTGCAACAGGTGGATTGGTAAGTAACCTACTCTGTCTTAATGTTCTTTTTGTGCCTGCCCCAACTCCTATAAGAAGGATTACTTTTTACTTATTAGAAATGATGGAACTTTTAGCTTGTGCTGTAGAGTGTAGAGAAGGAGCCACATTGGTAGGTAGAAATGTAATCTTGGACAGTGCCACTGGTGTTATTAATCATATTGGTTTTTCTCTCTATTAGTAAGAAACCAATCTCTTAGTGAGAAAGATGGAAAAACATAGTAGAAGACAAGGGTATACAAAAGGAGCTCGACAAAAAAGTTAATTGCAAGAGGGAGCCTAAAGTAACTACAAAAAGAAGTTTCAATCCAACAAAATCAAATTAAGATCATAGTAATACTTAACTTGTGGTGCTAGTTAAAATCAGGGTACAATTAATACTTTTCACTGAATGCCTGATCTGATCTCTACTTCCTCCCCACATCCTTCCTATTATAGTTTAGTTCTTTGATAGTTTTAACCTCTTCTAGTTTTCTTCAAATGTGGTTCTTATCCATTTCTGGGTGAATGGCTGCCAATTTTATCTGTGTGGATAATTGCAAACTGCATCGCAGTGATTTGTGCAGTTTACACATCATAATTTTTTTTTTTTTTTGAGAAATGGTTTGTGCAAACTGCAAGAAATTACTGTTTTGCATAGGCCACCAAAAGGGACAATACAAAGATTGCCTGATTGGACGGTACACTAATTGAACCTTACGCAGGTACAAATTAATCTACAAGTTTGTTTGAGCATAATTGCATTGCACTTGTTGCTTCAATATGGTGGTGCACATTACTTTTTGCTCTACATTTAATCACTCATGATCTTGGTGCATAAATGTGAAAAACTATCATCCTTCTTTAATGAATTGATGTTTGTTTCACGTTCTTGTGGAAGCTTTGTTCCGAAAGTCTTCACCATCTCGTTCATGTTTGCCATAATGCTCATATCGTCGGTGCTTGTTGCAGGCATCGGCCATAGTGGAGAATTCCAGGGATTTGTTGTGAGAATGCTCAGC ATGTCCGATCCATATTCAGGGGCGAAAGGAGGTAGGCTCACCTTCAAGGGAGGAGTCTTAGCCTCTCGTAGCAAGGATATTGACAAGAAGAAGAAGAAGAAGAAGAAAGACAAAAGTAAGACCGACGAGAACCCCACGGACGATGGCGAGATTTTGACATCGGCTGATGGTGTAGAAGATGGAGACGGAGCAATGTATACTATTGACGCGGCTAAGCGTATGAAGTACGAGGAGCTATTTCCTGTGGAGACAAGGAAGTTTGGTTACGACCCTAACAACTCCAATACCAAGTTCAAGTCCGTGGAGGATGCTCTCGATGACCGTGTCAAAAAGAAGGCGGATCTTTGTCTCTGCATTCACTCTTGCAATTCAATAGACGCATTCCCAGCTGTTCATACTTCATTTATTATCAAGGCTGCATTCTATCTGTTCCCTTTTGAAAGAAACTATGCTTGTTTCCATCCAAGCACAAAGGCAAGGCAGTTCAGGCATACGCATAGCCAGAGGCACCAAGAAAAAAAGGAGAGAGTAGCCTCTGATCATAGTGCAACAGAAATGATGGAACTTTTAGCTTGTGCTGTAGAGTGTAGAGAAGGAGCCACATTGGTAGGCATCGGCCATAGTGGAGAATTCCAGGGATTTGTTGTGAGAATGCTCAGC ATGTCCGATCCATATTCAGGGGCGAAAGGAGGTAGGCTCACCTTCAAGGGAGGAGTCTTAGCCTCTCGTAGCAAGGATATTGACAAGAAGAAGAAGAAGAAGAAGAAAGACAAAAGTAAGACCGACGAGAACCCCACGGACGATGGCGAGATTTTGACATCGGCTGATGGTGTAGAAGATGGAGACGGAGCAATGTATACTATTGACGCGGCTAAGCGTATGAAGTACGAGGAGCTATTTCCTGTGGAGACAAGGAAGTTTGGTTACGACCCTAACAACTCCAATACCAAGTTCAAGTCCGTGGAGGATGCTCTCGATGACCGTGTCAAAAAGAAGGCGGATCTTTGTCTCTGCATTCACTCTTGCAATTCAATAGACGCATTCCCAGCTGTTCATACTTCATTTATTATCAAGGCTGCATTCTATCTGTTCCCTTTTGAAAGAAACTATGCTTGTTTCCATCCAAGCACAAAGGCAAGGCAGTTCAGGCATACGCATAGCCAGAGGCACCAAGAAAAAAAGGAGAGAGTAGCCTCTGATCATAGTGCAACAGAAATGATGGAACTTTTAGCTTGTGCTGTAGAGTGTAGAGAAGGAGCCACATTGGTAGGCATCGGCCATAGTGGAGAATTCCAGGGATTTGTTGTGAGAATGCTCAGC MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKDKSKTDENPTDDGEILTSADGVEDGDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADLCLCIHSCNSIDAFPAVHTSFIIKAAFYLFPFERNYACFHPSTKARQFRHTHSQRHQEKKERVASDHSATEMMELLACAVECREGATLVGIGHSGEFQGFVVRMLS
BLAST of CsGy1G005020 vs. NCBI nr
Match: XP_004137395.2 (PREDICTED: uncharacterized protein LOC101213981 [Cucumis sativus] >KGN63966.1 hypothetical protein Csa_1G031870 [Cucumis sativus]) HSP 1 Score: 189.5 bits (480), Expect = 1.2e-44 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of CsGy1G005020 vs. NCBI nr
Match: XP_008438568.1 (PREDICTED: uncharacterized protein LOC103483601 [Cucumis melo]) HSP 1 Score: 177.6 bits (449), Expect = 4.8e-41 Identity = 109/114 (95.61%), Postives = 110/114 (96.49%), Query Frame = 0
BLAST of CsGy1G005020 vs. NCBI nr
Match: XP_022137706.1 (uncharacterized protein LOC111009076 [Momordica charantia]) HSP 1 Score: 160.2 bits (404), Expect = 7.9e-36 Identity = 101/116 (87.07%), Postives = 109/116 (93.97%), Query Frame = 0
BLAST of CsGy1G005020 vs. NCBI nr
Match: XP_023524446.1 (uncharacterized protein LOC111788363 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 158.3 bits (399), Expect = 3.0e-35 Identity = 92/114 (80.70%), Postives = 101/114 (88.60%), Query Frame = 0
BLAST of CsGy1G005020 vs. NCBI nr
Match: XP_023001360.1 (uncharacterized protein LOC111495520 [Cucurbita maxima] >XP_023001361.1 uncharacterized protein LOC111495520 [Cucurbita maxima]) HSP 1 Score: 157.9 bits (398), Expect = 3.9e-35 Identity = 99/114 (86.84%), Postives = 106/114 (92.98%), Query Frame = 0
BLAST of CsGy1G005020 vs. TAIR10
Match: AT2G25720.1 (unknown protein) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09 Identity = 60/116 (51.72%), Postives = 66/116 (56.90%), Query Frame = 0
BLAST of CsGy1G005020 vs. TrEMBL
Match: tr|A0A0A0LVD6|A0A0A0LVD6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031870 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 8.0e-45 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of CsGy1G005020 vs. TrEMBL
Match: tr|A0A1S3AWC8|A0A1S3AWC8_CUCME (uncharacterized protein LOC103483601 OS=Cucumis melo OX=3656 GN=LOC103483601 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 3.1e-41 Identity = 109/114 (95.61%), Postives = 110/114 (96.49%), Query Frame = 0
BLAST of CsGy1G005020 vs. TrEMBL
Match: tr|A0A068TTB9|A0A068TTB9_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00022748001 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 9.5e-22 Identity = 82/116 (70.69%), Postives = 90/116 (77.59%), Query Frame = 0
BLAST of CsGy1G005020 vs. TrEMBL
Match: tr|A0A2P5FQE5|A0A2P5FQE5_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_043710 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.6e-21 Identity = 71/116 (61.21%), Postives = 80/116 (68.97%), Query Frame = 0
BLAST of CsGy1G005020 vs. TrEMBL
Match: tr|A0A1U8M9S4|A0A1U8M9S4_GOSHI (uncharacterized protein LOC107934433 OS=Gossypium hirsutum OX=3635 GN=LOC107934433 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 2.1e-21 Identity = 64/114 (56.14%), Postives = 69/114 (60.53%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|