CsaV3_1G005150 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G005150
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Long-chain-aldehyde dehydrogenase
Location	chr1 : 3421396 .. 3424761 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTATATATTTCATTATTATTCTACACAATACAATTGCCTTTATATTTACTAATATTTTGGGGGATTTTGGGTTTAGGGTTATTGTTTGCCAATTGGGCCAAGAAAGAACCCGAATAGGCACCCGAACATAAATCTCATTGTCATCTCAGCGAGCTGAAGCAACCGGAAAGTACTCCAAACGACGATCATTTCCTCCCTTCCGGTGATCATCAAGCAACCGAAAGGTTTCTGGGCAGGCAAGGAACTGACCCCACAGGACACTGAAGACGCGCTACGATGTCCGATCCATATTCAGGGGCGAAAGGAGGTAGGCTCACCTTCAAGGGAGGAGTCTTAGCCTCTCGTAGCAAGGATATTGACAAGAAGAAGAAGAAGAAGAAGAAAGACAAAAGTAAGACCGACGAGAACCCCACGGACGATGGCGAGATTTTGACATCGGCTGATGGTGTAGAAGATGGAGACGGAGCAATGTATACTATTGACGCGGCTAAGCGTATGAAGTACGAGGAGCTATTTCCTGTGGAGACAAGGAAGTTTGGTTACGACCCTAACAACTCCAATACCAAGTTCAAGTCCGTGGAGGATGCTCTCGATGACCGTGTCAAAAAGAAGGCGGATCGTTATTGTAAATAATCAGGTTACAGCTCTTGCTTTTTTGCTTTAGTTTGTCTCTGCATTCACTCTTGCAATTCAATAGACGCAGTTTGTATTTCCTGCTTGATTTTGATGGATACTTCAGCTCTGATTTTCAATTAGACCCGCAAAATGTTTAGGGCATTGAGCATATTAGGTTAAGTGTTGGCTTCTGACGAAAGAAATGTTTGTCCATAGACTCGGAGAACATCCGAATTTAGTTAGGGTATTCTCTTTTATTTTTTCTCTCTTCTACATTTGCCTCTTTCAAGAATCCTTGATTCAATACGCGTAGGAAGGAATTTGTTACACGGTCCCTTTGGTAGCTACTGAATTTTCCTCTAGTCTTATATTGCTGGAGAACCGGAAGTTGAATCTGAACTAGCGAATTTCTGGTCCACTCCTAAAGAAAGGCCAAGGAATATGTAGTCTTATACCGTCAGCATATTATCTTGATAGTAGTTTTGCATACTCATTTTGTATTTTTAGTTCCCAGCTGTTCATACTTCATTTATTATCAAGGCTGCATTCTATCTGTTCCCTTTTGAAAGAAACTATGCTTGTTTCCATCCAAGCACAAAGGCAAGGCAGTTCAGGTATCTAACTATATTCCAGAGGGGTTGGAGAATAAAAGAATTTGGAAATTGGTCCTCCAACGTGTTAATTTTTAAGACAAGGTAGAATTGTGCTATTCATTTGTGAATGCTAGCAGTAGAGTAATATAGGTTTAGGCAAGGCAGTGGAGATATAAGCCCGGATTATAAAGGTCTCTGAGTTGTTAGTAACTAGCATATACGGTTATATAACACATATCCTCTACAAATGCCATAAGGTGGAGTGGCCCTCAGTGGATCTCTTGCCCAACCGGCTGGAAGTCCTCATATTTATCTGCAGAGTCTATTATCACCTTCTAGATTCATCAGTACTGTAGTGTGCCCCAATAACATTTGTTGGATTATTTTTAACCTAGTCTCAAATGTTGGAGATGGGCAAGTTCTGGACACCTAAACCGGTCTCTCGCTTTCTCTGTCTTCTGGGGAGAACACGTTTATGGCCAGCCTTTGCCTATGAACTATGGGGAGAAATGCTTAGGCATATGTTAGTTACCTTCTTGATATGATAAGCTGATTTAGGAAAGTTAATTCATGTTAGGCATACGCATAGCCAGAGGCACCAAGAAAAAAAGGAGAGAGTAGCCTCTGATCATAGTGCAACAGGTGGATTGGTAAGTAACCTACTCTGTCTTAATGTTCTTTTTGTGCCTGCCCCAACTCCTATAAGAAGGATTACTTTTTACTTATTAGAAATGATGGAACTTTTAGCTTGTGCTGTAGAGTGTAGAGAAGGAGCCACATTGGTAGGTAGAAATGTAATCTTGGACAGTGCCACTGGTGTTATTAATCATATTGGTTTTTCTCTCTATTAGTAAGAAACCAATCTCTTAGTGAGAAAGATGGAAAAACATAGTAGAAGACAAGGGTATACAAAAGGAGCTCGACAAAAAAGTTAATTGCAAGAGGGAGCCTAAAGTAACTACAAAAAGAAGTTTCAATCCAACAAAATCAAATTAAGATCATAGTAATACTTAACTTGTGGTGCTAGTTAAAATCAGGGTACAATTAATACTTTTCACTGAATGCCTGATCTGATCTCTACTTCCTCCCCACATCCTTCCTATTATAGTTTAGTTCTTTGATAGTTTTAACCTCTTCTAGTTTTCTTCAAATGTGGTTCTTATCCATTTCTGGGTGAATGGCTGCCAATTTTATCTGTGTGGATAATTGCAAACTGCATCGCAGTGATTTGTGCAGTTTACACATCATAATTTTTTTTTTTTTTTGAGAAATGGTTTGTGCAAACTGCAAGAAATTACTGTTTTGCATAGGCCACCAAAAGGGACAATACAAAGATTGCCTGATTGGACGGTACACTAATTGAACCTTACGCAGGTACAAATTAATCTACAAGTTTGTTTGAGCATAATTGCATTGCACTTGTTGCTTCAATATGGTGGTGCACATTACTTTTTGCTCTACATTTAATCACTCATGATCTTGGTGCATAAATGTGAAAAACTATCATCCTTCTTTAATGAATTGATGTTTGTTTCACGTTCTTGTGGAAGCTTTGTTCCGAAAGTCTTCACCATCTCGTTCATGTTTGCCATAATGCTCATATCGTCGGTGCTTGTTGCAGGCATCGGCCATAGTGGAGAATTCCAGGGATTTGTTGTGAGAATGCTCAGCAGGTCATCATAATCCACTAAGCAACGGGTTTAGAATCACACTTCCTAAGATTTATGGGTTTCATGGTATTGTTACCTATACTCATGGTCCCATCGAAGAAACTTTATTATCTAGCTGATTGTAGTTACTACATCCCCCTGACCCTTTTCCAATGGGTTAAATTTGTACCAGCTAACATGAAAATATGGCTTTATCTTTGTGTATAAATGATGGTTTATGGATAATTCTAACAATTCCGGAACCAAATAATTTAGTTTGGATTGAAATATAAATCTTCTTGACTTGCTCAAAAATCATTGTAATGGTCTTATGTTGGCTATAAAGTTAGAATATGGAAAGGCTACACAGGAATATGGGATTTGTCCAAAGTTAACTTCTGTTCATCAATTTCAACTTATGAACTTTTAAAATATCAATTTTAGCTTTGAACTTGTATGTAATAACCCCTTTCCATTATGCTATGTTAACTAATATCTGAATCTCG

mRNA sequence

ATGTCCGATCCATATTCAGGGGCGAAAGGAGGTAGGCTCACCTTCAAGGGAGGAGTCTTAGCCTCTCGTAGCAAGGATATTGACAAGAAGAAGAAGAAGAAGAAGAAAGACAAAAGTAAGACCGACGAGAACCCCACGGACGATGGCGAGATTTTGACATCGGCTGATGGTGTAGAAGATGGAGACGGAGCAATGTATACTATTGACGCGGCTAAGCGTATGAAGTACGAGGAGCTATTTCCTGTGGAGACAAGGAAGTTTGGTTACGACCCTAACAACTCCAATACCAAGTTCAAGTCCGTGGAGGATGCTCTCGATGACCGTGTCAAAAAGAAGGCGGATCGTTATTGTAAATAA

Coding sequence (CDS)

ATGTCCGATCCATATTCAGGGGCGAAAGGAGGTAGGCTCACCTTCAAGGGAGGAGTCTTAGCCTCTCGTAGCAAGGATATTGACAAGAAGAAGAAGAAGAAGAAGAAAGACAAAAGTAAGACCGACGAGAACCCCACGGACGATGGCGAGATTTTGACATCGGCTGATGGTGTAGAAGATGGAGACGGAGCAATGTATACTATTGACGCGGCTAAGCGTATGAAGTACGAGGAGCTATTTCCTGTGGAGACAAGGAAGTTTGGTTACGACCCTAACAACTCCAATACCAAGTTCAAGTCCGTGGAGGATGCTCTCGATGACCGTGTCAAAAAGAAGGCGGATCGTTATTGTAAATAA

Protein sequence

MSDPYSGAKGGRLTFKGGVLASRSKDIDKKKKKKKKDKSKTDENPTDDGEILTSADGVEDGDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADRYCK

Homology

[Close]

BLAST of CsaV3_1G005150 vs. NCBI nr
Match: XP_004137395.2 (PREDICTED: uncharacterized protein LOC101213981 [Cucumis sativus] >KGN63966.1 hypothetical protein Csa_1G031870 [Cucumis sativus])

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MSDPYSGAKGGRLTFKGGVLASRSKDXXXXXXXXXXXXXXXXXXPTDDGEILTSADGVED 60
           MSDPYSGAKGGRLTFKGGVLASRSKDXXXXXXXXXXXXXXXXXXPTDDGEILTSADGVED
Sbjct: 1   MSDPYSGAKGGRLTFKGGVLASRSKDXXXXXXXXXXXXXXXXXXPTDDGEILTSADGVED 60

Query: 61  GDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADRYCK 119
           GDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADRYCK
Sbjct: 61  GDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADRYCK 118

[Close]

BLAST of CsaV3_1G005150 vs. NCBI nr
Match: XP_008438568.1 (PREDICTED: uncharacterized protein LOC103483601 [Cucumis melo])

HSP 1 Score: 186.8 bits (473), Expect = 4.2e-44
Identity = 113/118 (95.76%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MSDPYSGAKGGRLTFKGGVLASRSKDXXXXXXXXXXXXXXXXXXPTDDGEILTSADGVED 60
           MSDPY+GAKGGRLTFKGGVLASRS  XXXXXXXXXXXXXXXXXXPTDDGEILTSADGVE 
Sbjct: 1   MSDPYAGAKGGRLTFKGGVLASRSXXXXXXXXXXXXXXXXXXXXPTDDGEILTSADGVEG 60

Query: 61  GDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADRYCK 119
           GDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTK KSVEDALDDRVKKKADRYCK
Sbjct: 61  GDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKSKSVEDALDDRVKKKADRYCK 118

[Close]

BLAST of CsaV3_1G005150 vs. NCBI nr
Match: XP_022137706.1 (uncharacterized protein LOC111009076 [Momordica charantia])

HSP 1 Score: 169.5 bits (428), Expect = 7.0e-39
Identity = 105/120 (87.50%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MSDPYSGAKGGRLTFKGGVLASRSK--DXXXXXXXXXXXXXXXXXXPTDDGEILTSADGV 60
           MSDP++GAKGGRLTFKGGVLASRSK  DXXXXXXXXXXXXXXXXXX TD+ EIL+SAD V
Sbjct: 1   MSDPFAGAKGGRLTFKGGVLASRSKAIDXXXXXXXXXXXXXXXXXXXTDETEILSSADAV 60

Query: 61  EDGDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADRYCK 119
           + GDG +YTIDAAKRMKYEELFPVET+KFGYDPNNSNTKFKSVE+ALDDRVKKKADRYCK
Sbjct: 61  DGGDGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKFKSVEEALDDRVKKKADRYCK 120

[Close]

BLAST of CsaV3_1G005150 vs. NCBI nr
Match: XP_023524446.1 (uncharacterized protein LOC111788363 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.5 bits (423), Expect = 2.7e-38
Identity = 96/118 (81.36%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 1   MSDPYSGAKGGRLTFKGGVLASRSKDXXXXXXXXXXXXXXXXXXPTDDGEILTSADGVED 60
           MSDP++GAKGGRLTFKGGVLASRSK     XXXXXXXXXXX   PTD+GEIL+SADG + 
Sbjct: 1   MSDPFAGAKGGRLTFKGGVLASRSK-AIDKXXXXXXXXXXXDENPTDEGEILSSADGADG 60

Query: 61  GDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADRYCK 119
           G G +YTIDAAKRMKYEELFPVET+KFGYDPNNSNTK KSVE++LDDRVKKKADRYCK
Sbjct: 61  GVGEVYTIDAAKRMKYEELFPVETKKFGYDPNNSNTKLKSVEESLDDRVKKKADRYCK 117

[Close]

BLAST of CsaV3_1G005150 vs. NCBI nr
Match: XP_023001360.1 (uncharacterized protein LOC111495520 [Cucurbita maxima] >XP_023001361.1 uncharacterized protein LOC111495520 [Cucurbita maxima])

HSP 1 Score: 167.2 bits (422), Expect = 3.5e-38
Identity = 103/118 (87.29%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 1   MSDPYSGAKGGRLTFKGGVLASRSKDXXXXXXXXXXXXXXXXXXPTDDGEILTSADGVED 60
           MSDPYSGAKGGRLTFKGGVLASRS  XXXXXXXXXXXXXXXXXX  D+ EIL+SADGVE 
Sbjct: 1   MSDPYSGAKGGRLTFKGGVLASRSXXXXXXXXXXXXXXXXXXXXXXDETEILSSADGVEG 60

Query: 61  GDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADRYCK 119
            +G +YTIDAAKRMKYEELFPVETRKFGYDPNN++TKFKSVE+ALDDRVKKKADRYCK
Sbjct: 61  EEGVVYTIDAAKRMKYEELFPVETRKFGYDPNNADTKFKSVEEALDDRVKKKADRYCK 118

[Close]

BLAST of CsaV3_1G005150 vs. TAIR10
Match: AT2G25720.1 (unknown protein)

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12
Identity = 64/120 (53.33%), Postives = 70/120 (58.33%), Query Frame = 0


Query: 1   MSDPYSGAKGGRLTFKGGVLASRS--KDXXXXXXXXXXXXXXXXXXPTDDGEILTSADGV 60
           MSDPY    GGRL FKGG LA+R   + XXXXXXXXXXXXXXXXXX              
Sbjct: 1   MSDPYERVNGGRLAFKGGDLATRKSIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  EDGDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADRYCK 119
                            Y++LFPVE +KFGY P      F+S EDALDDRVKKKADRYCK
Sbjct: 61  XXXXXXXXXXXXXXXXXYDDLFPVEAKKFGYIP---KANFESREDALDDRVKKKADRYCK 117

[Close]

BLAST of CsaV3_1G005150 vs. TrEMBL
Match: tr|A0A0A0LVD6|A0A0A0LVD6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031870 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 7.1e-48
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MSDPYSGAKGGRLTFKGGVLASRSKDXXXXXXXXXXXXXXXXXXPTDDGEILTSADGVED 60
           MSDPYSGAKGGRLTFKGGVLASRSKDXXXXXXXXXXXXXXXXXXPTDDGEILTSADGVED
Sbjct: 1   MSDPYSGAKGGRLTFKGGVLASRSKDXXXXXXXXXXXXXXXXXXPTDDGEILTSADGVED 60

Query: 61  GDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADRYCK 119
           GDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADRYCK
Sbjct: 61  GDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADRYCK 118

[Close]

BLAST of CsaV3_1G005150 vs. TrEMBL
Match: tr|A0A1S3AWC8|A0A1S3AWC8_CUCME (uncharacterized protein LOC103483601 OS=Cucumis melo OX=3656 GN=LOC103483601 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.8e-44
Identity = 113/118 (95.76%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MSDPYSGAKGGRLTFKGGVLASRSKDXXXXXXXXXXXXXXXXXXPTDDGEILTSADGVED 60
           MSDPY+GAKGGRLTFKGGVLASRS  XXXXXXXXXXXXXXXXXXPTDDGEILTSADGVE 
Sbjct: 1   MSDPYAGAKGGRLTFKGGVLASRSXXXXXXXXXXXXXXXXXXXXPTDDGEILTSADGVEG 60

Query: 61  GDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADRYCK 119
           GDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTK KSVEDALDDRVKKKADRYCK
Sbjct: 61  GDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKSKSVEDALDDRVKKKADRYCK 118

[Close]

BLAST of CsaV3_1G005150 vs. TrEMBL
Match: tr|A0A068TTB9|A0A068TTB9_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00022748001 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.5e-25
Identity = 86/120 (71.67%), Postives = 94/120 (78.33%), Query Frame = 0


Query: 1   MSDPYSGAKGGRLTFKGGVLASRSKDXXXXXXXXXXXXXXXXXXPTDDGEILT--SADGV 60
           MSD Y   +GGRLTFKGGVLASRSKD XXXXXXXXXXXXXXXXX  +D   +   SA G 
Sbjct: 1   MSDAYERVRGGRLTFKGGVLASRSKDIXXXXXXXXXXXXXXXXXLAEDPNQINDPSATGS 60

Query: 61  EDGDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADRYCK 119
             G G +YTIDAAK+MKY+ELFPVE +KF YDP   N K KSVE+ALDDRVKKKADRYCK
Sbjct: 61  GSGAGEIYTIDAAKKMKYDELFPVEAKKFLYDP---NAKSKSVEEALDDRVKKKADRYCK 117

[Close]

BLAST of CsaV3_1G005150 vs. TrEMBL
Match: tr|A0A2P5FQE5|A0A2P5FQE5_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_043710 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-24
Identity = 75/120 (62.50%), Postives = 84/120 (70.00%), Query Frame = 0


Query: 1   MSDPYSGAKGGRLTFKGGVLASRSKDXXXXXXXXXXXXXXXXXXPTDDGEILTSAD--GV 60
           MSDPY   KG RLTFKGG LA+RSK     XXXXXXX        T+  ++ TSAD  G 
Sbjct: 1   MSDPYEKVKGNRLTFKGGGLATRSKPISKSXXXXXXXLDPQNEDGTEPKDVETSADDNGS 60

Query: 61  EDGDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADRYCK 119
               G +YTIDAAKRMKYEELFPVE +KF YDP ++    K+VEDALDDRVKKKADRYCK
Sbjct: 61  GGAAGEVYTIDAAKRMKYEELFPVEAKKFSYDPKST---VKTVEDALDDRVKKKADRYCK 117

[Close]

BLAST of CsaV3_1G005150 vs. TrEMBL
Match: tr|A0A1U8M9S4|A0A1U8M9S4_GOSHI (uncharacterized protein LOC107934433 OS=Gossypium hirsutum OX=3635 GN=LOC107934433 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-24
Identity = 68/118 (57.63%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 1   MSDPYSGAKGGRLTFKGGVLASRSKDXXXXXXXXXXXXXXXXXXPTDDGEILTSADGVED 60
           MSD Y   KGGRLTFKGG LA+R                     PT D   + S +G E 
Sbjct: 1   MSDAYEKVKGGRLTFKGGSLATRKSIDKSKKKHKKKKIAEDDTQPTLDASTV-SVEGSES 60

Query: 61  GDGAMYTIDAAKRMKYEELFPVETRKFGYDPNNSNTKFKSVEDALDDRVKKKADRYCK 119
           G   +YTIDAAK+MKYEELFPVE RKFGYDP   N K  SVE ALDDRVKKKADRYCK
Sbjct: 61  GGADIYTIDAAKKMKYEELFPVEARKFGYDP--KNPKATSVEQALDDRVKKKADRYCK 115

The following BLAST results are available for this feature:

BLAST of CsaV3_1G005150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137395.2	1.1e-47	100.00	PREDICTED: uncharacterized protein LOC101213981 [Cucumis sativus] >KGN63966.1 hy...	[more]
XP_008438568.1	4.2e-44	95.76	PREDICTED: uncharacterized protein LOC103483601 [Cucumis melo]	[more]
XP_022137706.1	7.0e-39	87.50	uncharacterized protein LOC111009076 [Momordica charantia]	[more]
XP_023524446.1	2.7e-38	81.36	uncharacterized protein LOC111788363 [Cucurbita pepo subsp. pepo]	[more]
XP_023001360.1	3.5e-38	87.29	uncharacterized protein LOC111495520 [Cucurbita maxima] >XP_023001361.1 uncharac...	[more]

BLAST of CsaV3_1G005150 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G25720.1	1.1e-12	53.33	unknown protein	[more]

BLAST of CsaV3_1G005150 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G005150 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LVD6\|A0A0A0LVD6_CUCSA	7.1e-48	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G031870 PE=4 SV=1	[more]
tr\|A0A1S3AWC8\|A0A1S3AWC8_CUCME	2.8e-44	95.76	uncharacterized protein LOC103483601 OS=Cucumis melo OX=3656 GN=LOC103483601 PE=...	[more]
tr\|A0A068TTB9\|A0A068TTB9_COFCA	8.5e-25	71.67	Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00022748001 PE=4 ...	[more]
tr\|A0A2P5FQE5\|A0A2P5FQE5_9ROSA	1.4e-24	62.50	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_043710 PE=4 S...	[more]
tr\|A0A1U8M9S4\|A0A1U8M9S4_GOSHI	1.9e-24	57.63	uncharacterized protein LOC107934433 OS=Gossypium hirsutum OX=3635 GN=LOC1079344...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013865	DUF1754_euk

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G005150.1	CsaV3_1G005150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..58
None	No IPR available	PANTHER	PTHR13282:SF7	SUBFAMILY NOT NAMED	coord: 1..118
IPR013865	Protein of unknown function DUF1754, eukaryotic	PANTHER	PTHR13282	UNCHARACTERIZED	coord: 1..118

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G005150	CSPI01G05250	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G005150	Cucsa.112450	Cucumber (Gy14) v1	cgycucB143
CsaV3_1G005150	CmaCh13G011090	Cucurbita maxima (Rimu)	cmacucB0237
CsaV3_1G005150	CmoCh13G011570	Cucurbita moschata (Rifu)	cmocucB0224
CsaV3_1G005150	Cp4.1LG20g00500	Cucurbita pepo (Zucchini)	cpecucB0636
CsaV3_1G005150	CsGy1G005020	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G005150	Carg04729	Silver-seed gourd	carcucB0420
CsaV3_1G005150	Carg06974	Silver-seed gourd	carcucB0555
CsaV3_1G005150	Cla018639	Watermelon (97103) v1	cucwmB070
CsaV3_1G005150	MELO3C001953	Melon (DHL92) v3.5.1	cucmeB024
CsaV3_1G005150	ClCG04G012550	Watermelon (Charleston Gray)	cucwcgB063
CsaV3_1G005150	MELO3C001953.2	Melon (DHL92) v3.6.1	cucmedB022
CsaV3_1G005150	Cla97C04G079540	Watermelon (97103) v2	cucwmbB054
CsaV3_1G005150	Bhi08G001618	Wax gourd	cucwgoB036

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G005150	Cucurbita maxima (Rimu)	cmacucB0513
CsaV3_1G005150	Cucurbita moschata (Rifu)	cmocucB0501
CsaV3_1G005150	Cucurbita pepo (Zucchini)	cpecucB0665
CsaV3_1G005150	Bottle gourd (USVL1VR-Ls)	cuclsiB022