CsGy1G002330 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACCCTTCATGGAGGCCTAAGTGTGAGATCATGCCGTCCTTTGAAGATTCATATCCTTTTTCATGCAATCTTTCTCCAATCCATTTTAGGTAATACTTATTTCAACACGTTCTGTTTTTTTTTCATACCTTTTATTTAATTTTATTTCTAATTACACTTTGTTATACAACAACAACAATTAACAATAGTTCATATAGATCAAGCTACAACCATAATTATTCAGGGCTGGATTGGAACTACGCCAATTTTGGGTTACAAGAAAACATTTTTGAAGAGTCTTTTTTGGACCCTGAAGATATTGTGCCTATTAACACTTATATATCAGGTAATTCATTCATATAATGCATTAAAAAGTCTTTTTTTCATATATATAAAAATTGGATCTTTGTGTGTTTTTTGTCTGCAGAAGATGAGGTTGGGATTTGGAATGAAATGGATAATGGGGTATTTGGGGTTGTTGAGGAAGAGCCGCCATTGTTACTGCTGGAATGTGGAGAAAATGAGGAAAAGGAAGAGATGGTGGTGAGTAATAAGAAGGGGAAGAAAAGATCAATGCGTTTGAAATCAGAAAATGAATGTAGCAACAATAACAGTAATAATAATGGGAGCTGTTATTCATCATCAAAAATGTTGTCAAGAAAAGTAATACAAGAGTATTACTATATGCCTATAACTCAAGCTGCTAAAGAGCTTAATGTTGGACTTACTCTTTTGAAGAAGAGATGTAGAGAATTGGGTATAGGAAGATGGCCTCATAGGAAGTTGATGAGCATACAAACCCTAATCAAGAATATTAAGGTATGTTTTTTTCTTGGGTGTAGCATATGAAAACTCTTCTTTCAAATGTTTTTTCTTCCTCTTATCTCTTTGGTTTTGTGACTTGTGGAAACGTAGGTGTGAAAGGATATCCATATCAGTCAAATATGATACTTAGGGTTTGTAAGTGTGTGTCACATATTTGCAGGAGCTGATTGAAAAGGGAGATGATGAAGAAGGAAATGGATCAGAGAATTATAAGTTGAAGAATGTATTGGAAATATTAGAGAATGAGAAGAAATTAATGGAGGAGAGACCAGATCTGCAGTTAGAAGACAACACAAAGAGGCTTAGACAAGCTTGTTTCAAAGCCAATTACAAGAAAAGAAAGCTCTCTGGATTAATCATCAATAATAACAATAACAACAACATTGATGATATAAATTCCCAAAGTTATTTCTCATCCTCAACCACTACCATTGATGATCAAGACCATGATGATTATGATGAAGAGATGAAGTATCTCTTATCTGATTGCTCCTTTTCTTCTGCTAATTGCATGTTCATGTAA ATGGACCCTTCATGGAGGCCTAAGTGTGAGATCATGCCGTCCTTTGAAGATTCATATCCTTTTTCATGCAATCTTTCTCCAATCCATTTTAGATCAAGCTACAACCATAATTATTCAGGGCTGGATTGGAACTACGCCAATTTTGGGTTACAAGAAAACATTTTTGAAGAGTCTTTTTTGGACCCTGAAGATATTGTGCCTATTAACACTTATATATCAGAAGATGAGGTTGGGATTTGGAATGAAATGGATAATGGGGTATTTGGGGTTGTTGAGGAAGAGCCGCCATTGTTACTGCTGGAATGTGGAGAAAATGAGGAAAAGGAAGAGATGGTGGTGAGTAATAAGAAGGGGAAGAAAAGATCAATGCGTTTGAAATCAGAAAATGAATGTAGCAACAATAACAGTAATAATAATGGGAGCTGTTATTCATCATCAAAAATGTTGTCAAGAAAAGTAATACAAGAGTATTACTATATGCCTATAACTCAAGCTGCTAAAGAGCTTAATGTTGGACTTACTCTTTTGAAGAAGAGATGTAGAGAATTGGGTATAGGAAGATGGCCTCATAGGAAGTTGATGAGCATACAAACCCTAATCAAGAATATTAAGGAGCTGATTGAAAAGGGAGATGATGAAGAAGGAAATGGATCAGAGAATTATAAGTTGAAGAATGTATTGGAAATATTAGAGAATGAGAAGAAATTAATGGAGGAGAGACCAGATCTGCAGTTAGAAGACAACACAAAGAGGCTTAGACAAGCTTGTTTCAAAGCCAATTACAAGAAAAGAAAGCTCTCTGGATTAATCATCAATAATAACAATAACAACAACATTGATGATATAAATTCCCAAAGTTATTTCTCATCCTCAACCACTACCATTGATGATCAAGACCATGATGATTATGATGAAGAGATGAAGTATCTCTTATCTGATTGCTCCTTTTCTTCTGCTAATTGCATGTTCATGTAA ATGGACCCTTCATGGAGGCCTAAGTGTGAGATCATGCCGTCCTTTGAAGATTCATATCCTTTTTCATGCAATCTTTCTCCAATCCATTTTAGATCAAGCTACAACCATAATTATTCAGGGCTGGATTGGAACTACGCCAATTTTGGGTTACAAGAAAACATTTTTGAAGAGTCTTTTTTGGACCCTGAAGATATTGTGCCTATTAACACTTATATATCAGAAGATGAGGTTGGGATTTGGAATGAAATGGATAATGGGGTATTTGGGGTTGTTGAGGAAGAGCCGCCATTGTTACTGCTGGAATGTGGAGAAAATGAGGAAAAGGAAGAGATGGTGGTGAGTAATAAGAAGGGGAAGAAAAGATCAATGCGTTTGAAATCAGAAAATGAATGTAGCAACAATAACAGTAATAATAATGGGAGCTGTTATTCATCATCAAAAATGTTGTCAAGAAAAGTAATACAAGAGTATTACTATATGCCTATAACTCAAGCTGCTAAAGAGCTTAATGTTGGACTTACTCTTTTGAAGAAGAGATGTAGAGAATTGGGTATAGGAAGATGGCCTCATAGGAAGTTGATGAGCATACAAACCCTAATCAAGAATATTAAGGAGCTGATTGAAAAGGGAGATGATGAAGAAGGAAATGGATCAGAGAATTATAAGTTGAAGAATGTATTGGAAATATTAGAGAATGAGAAGAAATTAATGGAGGAGAGACCAGATCTGCAGTTAGAAGACAACACAAAGAGGCTTAGACAAGCTTGTTTCAAAGCCAATTACAAGAAAAGAAAGCTCTCTGGATTAATCATCAATAATAACAATAACAACAACATTGATGATATAAATTCCCAAAGTTATTTCTCATCCTCAACCACTACCATTGATGATCAAGACCATGATGATTATGATGAAGAGATGAAGTATCTCTTATCTGATTGCTCCTTTTCTTCTGCTAATTGCATGTTCATGTAA MDPSWRPKCEIMPSFEDSYPFSCNLSPIHFRSSYNHNYSGLDWNYANFGLQENIFEESFLDPEDIVPINTYISEDEVGIWNEMDNGVFGVVEEEPPLLLLECGENEEKEEMVVSNKKGKKRSMRLKSENECSNNNSNNNGSCYSSSKMLSRKVIQEYYYMPITQAAKELNVGLTLLKKRCRELGIGRWPHRKLMSIQTLIKNIKELIEKGDDEEGNGSENYKLKNVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLSGLIINNNNNNNIDDINSQSYFSSSTTTIDDQDHDDYDEEMKYLLSDCSFSSANCMFM
BLAST of CsGy1G002330 vs. NCBI nr
Match: KGN63670.1 (hypothetical protein Csa_1G009740 [Cucumis sativus]) HSP 1 Score: 397.1 bits (1019), Expect = 5.6e-107 Identity = 324/327 (99.08%), Postives = 324/327 (99.08%), Query Frame = 0
BLAST of CsGy1G002330 vs. NCBI nr
Match: XP_008453676.1 (PREDICTED: protein RKD1-like [Cucumis melo]) HSP 1 Score: 331.6 bits (849), Expect = 2.9e-87 Identity = 289/328 (88.11%), Postives = 298/328 (90.85%), Query Frame = 0
BLAST of CsGy1G002330 vs. NCBI nr
Match: XP_011660335.1 (PREDICTED: protein RKD1-like [Cucumis sativus]) HSP 1 Score: 316.6 bits (810), Expect = 9.7e-83 Identity = 292/324 (90.12%), Postives = 292/324 (90.12%), Query Frame = 0
BLAST of CsGy1G002330 vs. NCBI nr
Match: XP_023516752.1 (protein RKD1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 226.9 bits (577), Expect = 1.0e-55 Identity = 157/279 (56.27%), Postives = 182/279 (65.23%), Query Frame = 0
BLAST of CsGy1G002330 vs. NCBI nr
Match: XP_022921381.1 (protein RKD2-like [Cucurbita moschata]) HSP 1 Score: 224.6 bits (571), Expect = 5.0e-55 Identity = 147/279 (52.69%), Postives = 171/279 (61.29%), Query Frame = 0
BLAST of CsGy1G002330 vs. TAIR10
Match: AT5G66990.1 (RWP-RK domain-containing protein) HSP 1 Score: 130.2 bits (326), Expect = 2.3e-30 Identity = 67/106 (63.21%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of CsGy1G002330 vs. TAIR10
Match: AT1G74480.1 (RWP-RK domain-containing protein) HSP 1 Score: 129.8 bits (325), Expect = 3.0e-30 Identity = 68/106 (64.15%), Postives = 84/106 (79.25%), Query Frame = 0
BLAST of CsGy1G002330 vs. TAIR10
Match: AT1G18790.1 (RWP-RK domain-containing protein) HSP 1 Score: 119.8 bits (299), Expect = 3.1e-27 Identity = 65/107 (60.75%), Postives = 76/107 (71.03%), Query Frame = 0
BLAST of CsGy1G002330 vs. TAIR10
Match: AT5G53040.1 (RWP-RK domain-containing protein) HSP 1 Score: 114.0 bits (284), Expect = 1.7e-25 Identity = 63/105 (60.00%), Postives = 77/105 (73.33%), Query Frame = 0
BLAST of CsGy1G002330 vs. TAIR10
Match: AT4G35590.1 (RWP-RK domain-containing protein) HSP 1 Score: 75.9 bits (185), Expect = 5.2e-14 Identity = 41/101 (40.59%), Postives = 63/101 (62.38%), Query Frame = 0
BLAST of CsGy1G002330 vs. Swiss-Prot
Match: sp|Q9FGD1|RKD3_ARATH (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 4.2e-29 Identity = 67/106 (63.21%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of CsGy1G002330 vs. Swiss-Prot
Match: sp|Q9CA66|RKD2_ARATH (Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.5e-29 Identity = 68/106 (64.15%), Postives = 84/106 (79.25%), Query Frame = 0
BLAST of CsGy1G002330 vs. Swiss-Prot
Match: sp|Q9M9U9|RKD1_ARATH (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 5.7e-26 Identity = 65/107 (60.75%), Postives = 76/107 (71.03%), Query Frame = 0
BLAST of CsGy1G002330 vs. Swiss-Prot
Match: sp|Q9LVU8|RKD4_ARATH (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.1e-24 Identity = 63/105 (60.00%), Postives = 77/105 (73.33%), Query Frame = 0
BLAST of CsGy1G002330 vs. Swiss-Prot
Match: sp|O81791|RKD5_ARATH (Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 9.4e-13 Identity = 41/101 (40.59%), Postives = 63/101 (62.38%), Query Frame = 0
BLAST of CsGy1G002330 vs. TrEMBL
Match: tr|A0A0A0LP42|A0A0A0LP42_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009740 PE=4 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 3.7e-107 Identity = 324/327 (99.08%), Postives = 324/327 (99.08%), Query Frame = 0
BLAST of CsGy1G002330 vs. TrEMBL
Match: tr|A0A1S3BWU6|A0A1S3BWU6_CUCME (protein RKD1-like OS=Cucumis melo OX=3656 GN=LOC103494325 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 1.9e-87 Identity = 289/328 (88.11%), Postives = 298/328 (90.85%), Query Frame = 0
BLAST of CsGy1G002330 vs. TrEMBL
Match: tr|A0A2R6QH61|A0A2R6QH61_ACTCH (Uncharacterized protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc18271 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 2.6e-36 Identity = 85/106 (80.19%), Postives = 94/106 (88.68%), Query Frame = 0
BLAST of CsGy1G002330 vs. TrEMBL
Match: tr|A0A2N9H073|A0A2N9H073_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32866 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 5.9e-36 Identity = 82/107 (76.64%), Postives = 95/107 (88.79%), Query Frame = 0
BLAST of CsGy1G002330 vs. TrEMBL
Match: tr|A0A2P5F733|A0A2P5F733_9ROSA (RWP-RK domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_105690 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 8.5e-35 Identity = 80/106 (75.47%), Postives = 92/106 (86.79%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |