Cp4.1LG18g07970 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG18g07970
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRWP-RK domain-containing protein, putative
LocationCp4.1LG18 : 7463360 .. 7464581 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCGACAATTATTCTGCGTTGGATTGGAACTGCAATTTTGGGTTTCCGGACAGCTTTTTTGACGTTGTTCCTTTGCTTGAGAGTTGCACAAATAATGACTCGTTTTTCGACCCCAAGGACATAGATCCTATTAGCAGTTTTATATCAGGTGATTGATTCATGATATACCCATTTGTGATTGTTCATATTTATGTTGAAAAGATTGAAAAGTTTTGATTTTGCAGAAGATGGGGGCGTTGGGATTTGGAGTGAATTGGAGAGTGAAGCATTTGGGGTTGAGGAAGGAGGCGGAGAAAATGGTAATGGAGGGATGGGAAACGAGGGGACGATGATGAGGAAGGCCAAAAGAAAGTGCTGCAGAGAAACGAGCAATGGCAGTGGCAGTGGCAGTGCATCAACAAAAACGTTGTCAAGAGAAGCAATATCGGAGTACTTCTACATGCCCATAACTCAGGCGGCAAAACAGCTCAATGTCGGACTCACTCTGTTGAAGAAGAGATGCAGAGAATTGGGTATAAGAAGATGGCCTCATAGGAAGCTCATGAGCCTGCAGACCCTAATCAAGAACGTCAAGGCATGTCTTTTTCTAAATATTTTGTTTAAGGTCGTGGATTGTTGGGACGAAGTCCTTTGGCTAGCTAATTTAGGAATGATCATGAGTTTATATGTAACAAATACACTCTATTGGTATGGGCCTTTTTATTGAGAATTGTGATTTCTAACATTGTATCAGAGATATGCTTTTAACTTAGTCATGCCAATAGAATCCTCGTAGTCAAACAAAGTGTATTGTAGTCGAGGGCTCCAGAAAGGAATCGAGCCGAGTAGGCTGTACTTAGGTTTATGATTTTCTTGACAAATTTTTGTTGGGAAATGAATGCAGGAGCTTCAAAAGGAAGATGGAGATCAGGGAGTGAATAAATTGAGCAATGTATTGAAGATATTAGAGAATGAGAAGAAATTAATGGAGGAGAGACCAGATTTGCAGTTGGAGGACAATACAAAGAGGCTTAGACAAGCCTGCTTCAAGGCCAACTACAAGAAAAGAAAGCTTTCTGGAACCAACAATGGCTCCCAGTATTTCTCCATTAATGGTGGAATGATTTGCAGAGATGATCAAGAACAGGGGGAGGAGGAGGAGGACGACGACGAAGACGATGAAGAAATAAAATATCTGTTGATGGGTTGCTCGTTTTCGTCGAGTATTGGCAGCCCATTGATG

mRNA sequence

ACCGACAATTATTCTGCGTTGGATTGGAACTGCAATTTTGGGTTTCCGGACAGCTTTTTTGACGTTGTTCCTTTGCTTGAGAGTTGCACAAATAATGACTCGTTTTTCGACCCCAAGGACATAGATCCTATTAGCAGTTTTATATCAGAAGATGGGGGCGTTGGGATTTGGAGTGAATTGGAGAGTGAAGCATTTGGGGTTGAGGAAGGAGGCGGAGAAAATGGTAATGGAGGGATGGGAAACGAGGGGACGATGATGAGGAAGGCCAAAAGAAAGTGCTGCAGAGAAACGAGCAATGGCAGTGGCAGTGGCAGTGCATCAACAAAAACGTTGTCAAGAGAAGCAATATCGGAGTACTTCTACATGCCCATAACTCAGGCGGCAAAACAGCTCAATGTCGGACTCACTCTGTTGAAGAAGAGATGCAGAGAATTGGATGGAGATCAGGGAGTGAATAAATTGAGCAATGTATTGAAGATATTAGAGAATGAGAAGAAATTAATGGAGGAGAGACCAGATTTGCAGTTGGAGGACAATACAAAGAGGCTTAGACAAGCCTGCTTCAAGGCCAACTACAAGAAAAGAAAGCTTTCTGGAACCAACAATGGCTCCCAGTATTTCTCCATTAATGGTGGAATGATTTGCAGAGATGATCAAGAACAGGGGGAGGAGGAGGAGGACGACGACGAAGACGATGAAGAAATAAAATATCTGTTGATGGGTTGCTCGTTTTCGTCGAGTATTGGCAGCCCATTGATG

Coding sequence (CDS)

ACCGACAATTATTCTGCGTTGGATTGGAACTGCAATTTTGGGTTTCCGGACAGCTTTTTTGACGTTGTTCCTTTGCTTGAGAGTTGCACAAATAATGACTCGTTTTTCGACCCCAAGGACATAGATCCTATTAGCAGTTTTATATCAGAAGATGGGGGCGTTGGGATTTGGAGTGAATTGGAGAGTGAAGCATTTGGGGTTGAGGAAGGAGGCGGAGAAAATGGTAATGGAGGGATGGGAAACGAGGGGACGATGATGAGGAAGGCCAAAAGAAAGTGCTGCAGAGAAACGAGCAATGGCAGTGGCAGTGGCAGTGCATCAACAAAAACGTTGTCAAGAGAAGCAATATCGGAGTACTTCTACATGCCCATAACTCAGGCGGCAAAACAGCTCAATGTCGGACTCACTCTGTTGAAGAAGAGATGCAGAGAATTGGATGGAGATCAGGGAGTGAATAAATTGAGCAATGTATTGAAGATATTAGAGAATGAGAAGAAATTAATGGAGGAGAGACCAGATTTGCAGTTGGAGGACAATACAAAGAGGCTTAGACAAGCCTGCTTCAAGGCCAACTACAAGAAAAGAAAGCTTTCTGGAACCAACAATGGCTCCCAGTATTTCTCCATTAATGGTGGAATGATTTGCAGAGATGATCAAGAACAGGGGGAGGAGGAGGAGGACGACGACGAAGACGATGAAGAAATAAAATATCTGTTGATGGGTTGCTCGTTTTCGTCGAGTATTGGCAGCCCATTGATG

Protein sequence

TDNYSALDWNCNFGFPDSFFDVVPLLESCTNNDSFFDPKDIDPISSFISEDGGVGIWSELESEAFGVEEGGGENGNGGMGNEGTMMRKAKRKCCRETSNGSGSGSASTKTLSREAISEYFYMPITQAAKQLNVGLTLLKKRCRELDGDQGVNKLSNVLKILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLSGTNNGSQYFSINGGMICRDDQEQGEEEEDDDEDDEEIKYLLMGCSFSSSIGSPLM
BLAST of Cp4.1LG18g07970 vs. Swiss-Prot
Match: RKD2_ARATH (Protein RKD2 OS=Arabidopsis thaliana GN=RKD2 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.6e-23
Identity = 90/245 (36.73%), Postives = 124/245 (50.61%), Query Frame = 1

Query: 40  DIDPISSFISEDGGVGIWSELESEAFGVEEGGGENGNGGMGNEGTMMRKAKRKCCRETSN 99
           D++P+S  +        W+E E    G      +    G   E T  RK   +    +  
Sbjct: 60  DLEPLSEDVLNSYSSASWNETEQNR-GDGASSEKKRENGTVKETTKKRKINERHREHSVR 119

Query: 100 -----GSGSGSASTKTLSREAISEYFYMPITQAAKQLNVGLTLLKKRCREL--------- 159
                 + + S++  TLS+E +S YFYMPITQAA  LNVGLTLLK+RCREL         
Sbjct: 120 IISDITTYTTSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRK 179

Query: 160 -----------------DGDQGVNKLSNVLKILENEKKLMEERPDLQLEDNTKRLRQACF 219
                            +G++   KL + L++LE EK+ +E+ PDL+ +D TKRLRQACF
Sbjct: 180 LMSLNTLISNVKELQKMEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACF 239

Query: 220 KANYK-KRKLSGTNNGSQYFSINGGMICRDDQEQGEEEEDDDEDDEEIKYLLMGCSFSSS 253
           KAN+K K+K S  ++ SQ  S +       D+     +E   E DEE+KYLL  C FSS 
Sbjct: 240 KANHKRKKKRSLKSDQSQVPSCSSSGSVPSDE---SVDEAGMESDEEMKYLL--CGFSSE 298

BLAST of Cp4.1LG18g07970 vs. Swiss-Prot
Match: RKD1_ARATH (Protein RKD1 OS=Arabidopsis thaliana GN=RKD1 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.6e-23
Identity = 87/220 (39.55%), Postives = 115/220 (52.27%), Query Frame = 1

Query: 30  TNNDSFFDPKDIDPISSFISEDGGVGIWSELESEAFGVEEGGGENGNGGMGNEGTMMRKA 89
           T+  SF    D++PIS    E     I S   S ++  EE    +         T     
Sbjct: 57  TSASSFLALPDLEPISIVSHE---ADILSVYGSASWTAEETMFVSDFAKKSETTT----T 116

Query: 90  KRKCCRETSNGSGSGSASTKTLSREAISEYFYMPITQAAKQLNVGLTLLKKRCREL---- 149
           K++ CRE    S S S   KTLS+E IS YFYMPITQAA++LN+GLTLLKKRCREL    
Sbjct: 117 KKRRCREECFSSCSVS---KTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKR 176

Query: 150 ----------------------DGDQGVNKLSNVLKILENEKKLMEERPDLQLEDNTKRL 209
                                 +G++  +KL N L+ LE EKK +E+ PDL+ ED TKRL
Sbjct: 177 WPHRKLMSLQKLISNVKELEKMEGEENEDKLRNALEKLEKEKKTIEKLPDLKFEDKTKRL 236

Query: 210 RQACFKANYKKRKLSGTN------------NGSQYFSING 212
           RQACFKAN+K+++ SG +            + S Y S++G
Sbjct: 237 RQACFKANHKRKRRSGMSTPITSSSSSASASSSSYSSVSG 266

BLAST of Cp4.1LG18g07970 vs. Swiss-Prot
Match: RKD3_ARATH (Protein RKD3 OS=Arabidopsis thaliana GN=RKD3 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.8e-19
Identity = 76/208 (36.54%), Postives = 101/208 (48.56%), Query Frame = 1

Query: 34  SFFDPKDIDPISSFISEDGGVGIWSELESEAFG-----VEEGGGENGNGGMGNE------ 93
           +F    D++ ISS  S D   G W+E            ++E    N  G    E      
Sbjct: 72  TFLASLDLEAISSTFSLDISSGWWNENNGNYNNQVEPNLDEISRTNTMGDPNMEQILHED 131

Query: 94  -GTMMRKAKRKCCRETSNGSGSGSASTKTLSREAISEYFYMPITQAAKQLNVGLTLLKKR 153
             TM  K  +K  R               +SRE + +YFYMPIT+AAK+LN+G+TLLKKR
Sbjct: 132 VNTMKEKTSQK--RIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKR 191

Query: 154 CRELD---------------------------GDQGVNKLSNVLKILENEKKLMEERPDL 203
           CREL                            G    +KL N L++LE EKK++EE PDL
Sbjct: 192 CRELGIPRWPHRKLTSLNALIANLKDLLGNTKGRTPKSKLRNALELLEMEKKMIEEVPDL 251

BLAST of Cp4.1LG18g07970 vs. Swiss-Prot
Match: RKD4_ARATH (Protein RKD4 OS=Arabidopsis thaliana GN=RKD4 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.6e-15
Identity = 50/105 (47.62%), Postives = 64/105 (60.95%), Query Frame = 1

Query: 111 LSREAISEYFYMPITQAAKQLNVGLTLLKKRCREL-----------DGDQGVNKLSNV-- 170
           L    I ++F  PI +AAK+LNVGLT+LKKRCREL             +  +  L NV  
Sbjct: 148 LEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKNVGM 207

Query: 171 ---LKILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLSG 200
              +K LE  + L+E+ PD +L D TK+LRQACFKANYK+RK  G
Sbjct: 208 EEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRKSLG 252

BLAST of Cp4.1LG18g07970 vs. TrEMBL
Match: A0A0A0LP42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G009740 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49
Identity = 140/296 (47.30%), Postives = 174/296 (58.78%), Query Frame = 1

Query: 3   NYSALDWN-CNFGFPDSFFDVVPLLESCTNNDSFFDPKDIDPISSFISEDGGVGIWSELE 62
           NYS LDWN  NFG  ++ F+           +SF DP+DI PI+++ISED  VGIW+E++
Sbjct: 40  NYSGLDWNYANFGLQENIFE-----------ESFLDPEDIVPINTYISEDE-VGIWNEMD 99

Query: 63  SEAFGVEEGG--------GENG-------NGGMGNEGTMMRKAKRKCCRETSNGSGSGSA 122
           +  FGV E          GEN        +   G + +M  K++ +C    SN +GS  +
Sbjct: 100 NGVFGVVEEEPPLLLLECGENEEKEEMVVSNKKGKKRSMRLKSENECSNNNSNNNGSCYS 159

Query: 123 STKTLSREAISEYFYMPITQAAKQLNVGLTLLKKRCREL--------------------- 182
           S+K LSR+ I EY+YMPITQAAK+LNVGLTLLKKRCREL                     
Sbjct: 160 SSKMLSRKVIQEYYYMPITQAAKELNVGLTLLKKRCRELGIGRWPHRKLMSIQTLIKNIK 219

Query: 183 ------DGDQGVN----KLSNVLKILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKR 242
                 D ++G      KL NVL+ILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKR
Sbjct: 220 ELIEKGDDEEGNGSENYKLKNVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKR 279

Query: 243 KLSG----TNNGSQYFSINGGMICRDDQEQGEEEEDDDEDDEEIKYLLMGCSFSSS 248
           KLSG     NN +    IN             +++D D+ DEE+KYLL  CSFSS+
Sbjct: 280 KLSGLIINNNNNNNIDDINSQSYF-SSSTTTIDDQDHDDYDEEMKYLLSDCSFSSA 322

BLAST of Cp4.1LG18g07970 vs. TrEMBL
Match: A0A061FXS1_THECC (RWP-RK domain-containing protein, putative OS=Theobroma cacao GN=TCM_014009 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 117/281 (41.64%), Postives = 154/281 (54.80%), Query Frame = 1

Query: 4   YSALDWNCNFGFPDSFFDVVPLLESCTNNDSFFDPKDIDPISSFISEDGGVGIWSELESE 63
           Y+++DW   F   +SFFD +PL+ S    D  +D  D +  SS I +     +    E+ 
Sbjct: 39  YNSVDWQNEFPIQESFFDALPLMSSFYT-DPLYDSLDFEKSSSLIQDH----LTIVAENN 98

Query: 64  AFGVEEGGG----------ENG-NGGMGNEGTMMRKAKRKCCRETSNGSGSGSASTKTLS 123
             G E+G G           NG N   G E    R+AKR  CRE         +S+  LS
Sbjct: 99  LLGCEKGNGFWNELGALFKPNGKNEDFGEELKEERRAKR--CREEK------CSSSTMLS 158

Query: 124 REAISEYFYMPITQAAKQLNVGLTLLKKRCREL--------------------------D 183
           R+ IS+YFY+PITQAAK+LNVGLTLLKKRCREL                          +
Sbjct: 159 RKVISQYFYLPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIWNVQELQKEE 218

Query: 184 GDQGVNKLSNVLKILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLSGTNNGSQY 243
           G++   KL   +++LE E+KL+EE PDLQLED TKRLRQACFKANYKKRKL    + S  
Sbjct: 219 GEESERKLREAVEVLERERKLLEEMPDLQLEDKTKRLRQACFKANYKKRKLMMMESQSS- 278

Query: 244 FSINGGMICRDDQEQGEEEEDDDEDDEEIKYLLMGCSFSSS 248
              +GG     D  +G + E ++ED+EE+K LL+  SFSS+
Sbjct: 279 ---SGGSRESLDLTRGYDME-NEEDEEEMK-LLLSDSFSST 300

BLAST of Cp4.1LG18g07970 vs. TrEMBL
Match: A0A151SLB7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_001754 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.1e-31
Identity = 107/272 (39.34%), Postives = 150/272 (55.15%), Query Frame = 1

Query: 4   YSALDWNCNFGFPDSFFDVVPLLESCTNNDSFFDPKDIDPISS-----FISEDGGVGIWS 63
           Y ALDW  +F   D +FD VPL++   + D  ++   I+P  +     F     G  +W+
Sbjct: 11  YPALDWAHDFPIQDYYFDAVPLMDYYPS-DPLYETLSIEPTPTVQDYDFYDIKKGFSVWN 70

Query: 64  E----LESEAFGVEEGGGENGNGG-MGNEGTMMRKAKRKCCRETSNGSGSGSASTKTLSR 123
           E    L+SE   +     E+G+G  M  +G + R+ + +           GS+ST+ LSR
Sbjct: 71  EVDAVLDSEKVFLFCNNEESGSGKEMMEDGKVNREREERI----------GSSSTRLLSR 130

Query: 124 EAISEYFYMPITQAAKQLNVGLTLLKKRCREL--------------------------DG 183
           + +S+YFYMPITQAA++LNVGLTLLKKRCR L                          +G
Sbjct: 131 KILSQYFYMPITQAARELNVGLTLLKKRCRVLGIRRWPHRKLMSLQTLINNIQELGKEEG 190

Query: 184 DQGVNKLSNVLKILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLSGTNNGSQYF 240
            +   KL + ++ILE EKKL+EE PD++LEDNTKRLRQACFKANYKKR+L G    +Q  
Sbjct: 191 KESEEKLRSAIEILEREKKLLEEMPDIELEDNTKRLRQACFKANYKKRRLEGRRE-TQSS 250

BLAST of Cp4.1LG18g07970 vs. TrEMBL
Match: W9QYQ3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015950 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.0e-31
Identity = 116/297 (39.06%), Postives = 155/297 (52.19%), Query Frame = 1

Query: 8   DWNCNFGFPDSFF-DVVPLLESCTNND-SFFDPKDIDPISSFISEDG---------GVGI 67
           +W       +SF  D VPL+E  ++ D SF+    ++PIS+ I +            +G+
Sbjct: 48  NWQNELPIQESFLLDAVPLMEYHSSTDHSFYGT--MEPISTVIQDHEFFYGNGNGPALGV 107

Query: 68  WSELESEAFGVE---EGGGENGNGGMGNEGTMMRKAKRKC---CRETSNGSGSGSASTKT 127
           W +     FG E   +    N NG  G    +M K +RK    CR +S    S S S K 
Sbjct: 108 WDQDGRVGFGPEIHVQQKPINHNGETGKY--LMTKEERKGVKRCRSSSEEKNSNSTS-KM 167

Query: 128 LSREAISEYFYMPITQAAKQLNVGLTLLKKRCREL------------------------- 187
           LSRE +S+Y+YMPITQAAK+LNVGLTLLKKRCREL                         
Sbjct: 168 LSRELLSKYYYMPITQAAKELNVGLTLLKKRCRELGISRWPHRKLISLQTLINNVQELVK 227

Query: 188 -DGDQGVNKLSNVLKILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKL------- 247
            +G +  +KL N +++LE EKKL+EE PD+QLED TKRLRQACFKANYKKRKL       
Sbjct: 228 QEGVENESKLKNAIELLEREKKLVEEVPDIQLEDTTKRLRQACFKANYKKRKLRIMESHE 287

BLAST of Cp4.1LG18g07970 vs. TrEMBL
Match: A0A0R0JQB7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G026500 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 7.0e-31
Identity = 100/268 (37.31%), Postives = 141/268 (52.61%), Query Frame = 1

Query: 4   YSALDWNCNFGFPDSFFDVVPLLESCTNNDSFFDPKDIDPISS-----FISEDGGVGIWS 63
           Y +LDW  +F   D + D VPL++   + D  ++    +P  S     F     G+  W 
Sbjct: 29  YPSLDWPYDFPIQDYYIDAVPLMDYYPS-DPLYETLTTEPTQSVQDYDFYDIKKGLPFWK 88

Query: 64  ELESEAFGVEEGGGENGNGGMGNEGTMMRKAKRKCCRETSNGSGSGSASTKTLSREAISE 123
           E+++  F  ++      N   G +  MM   K    R         S+S + LSR+ IS+
Sbjct: 89  EVDA-VFDSQKVFLFGNNEESGTKKEMMEDGKVNDNRGIEERISGSSSSCRMLSRKTISQ 148

Query: 124 YFYMPITQAAKQLNVGLTLLKKRCREL--------------------------DGDQGVN 183
           YFYMPITQAA++LNVG+TLLKKRCRE+                          +G +   
Sbjct: 149 YFYMPITQAARELNVGITLLKKRCREVGIRRWPHRKLMSLQTLINNVQELGKEEGRESEE 208

Query: 184 KLSNVLKILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLSGTNNGSQ-YFSING 240
           KL + ++ILE EKK++EE PD +LED TKRLRQACFKANYKKRKL+ T  G + + S   
Sbjct: 209 KLRSAIEILEREKKVLEEMPDTELEDTTKRLRQACFKANYKKRKLTVTGRGREPHSSSFS 268

BLAST of Cp4.1LG18g07970 vs. TAIR10
Match: AT1G74480.1 (AT1G74480.1 RWP-RK domain-containing protein)

HSP 1 Score: 111.3 bits (277), Expect = 8.7e-25
Identity = 90/245 (36.73%), Postives = 124/245 (50.61%), Query Frame = 1

Query: 40  DIDPISSFISEDGGVGIWSELESEAFGVEEGGGENGNGGMGNEGTMMRKAKRKCCRETSN 99
           D++P+S  +        W+E E    G      +    G   E T  RK   +    +  
Sbjct: 60  DLEPLSEDVLNSYSSASWNETEQNR-GDGASSEKKRENGTVKETTKKRKINERHREHSVR 119

Query: 100 -----GSGSGSASTKTLSREAISEYFYMPITQAAKQLNVGLTLLKKRCREL--------- 159
                 + + S++  TLS+E +S YFYMPITQAA  LNVGLTLLK+RCREL         
Sbjct: 120 IISDITTYTTSSAPTTLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRK 179

Query: 160 -----------------DGDQGVNKLSNVLKILENEKKLMEERPDLQLEDNTKRLRQACF 219
                            +G++   KL + L++LE EK+ +E+ PDL+ +D TKRLRQACF
Sbjct: 180 LMSLNTLISNVKELQKMEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACF 239

Query: 220 KANYK-KRKLSGTNNGSQYFSINGGMICRDDQEQGEEEEDDDEDDEEIKYLLMGCSFSSS 253
           KAN+K K+K S  ++ SQ  S +       D+     +E   E DEE+KYLL  C FSS 
Sbjct: 240 KANHKRKKKRSLKSDQSQVPSCSSSGSVPSDE---SVDEAGMESDEEMKYLL--CGFSSE 298

BLAST of Cp4.1LG18g07970 vs. TAIR10
Match: AT1G18790.1 (AT1G18790.1 RWP-RK domain-containing protein)

HSP 1 Score: 110.5 bits (275), Expect = 1.5e-24
Identity = 87/220 (39.55%), Postives = 115/220 (52.27%), Query Frame = 1

Query: 30  TNNDSFFDPKDIDPISSFISEDGGVGIWSELESEAFGVEEGGGENGNGGMGNEGTMMRKA 89
           T+  SF    D++PIS    E     I S   S ++  EE    +         T     
Sbjct: 57  TSASSFLALPDLEPISIVSHE---ADILSVYGSASWTAEETMFVSDFAKKSETTT----T 116

Query: 90  KRKCCRETSNGSGSGSASTKTLSREAISEYFYMPITQAAKQLNVGLTLLKKRCREL---- 149
           K++ CRE    S S S   KTLS+E IS YFYMPITQAA++LN+GLTLLKKRCREL    
Sbjct: 117 KKRRCREECFSSCSVS---KTLSKETISLYFYMPITQAARELNIGLTLLKKRCRELGIKR 176

Query: 150 ----------------------DGDQGVNKLSNVLKILENEKKLMEERPDLQLEDNTKRL 209
                                 +G++  +KL N L+ LE EKK +E+ PDL+ ED TKRL
Sbjct: 177 WPHRKLMSLQKLISNVKELEKMEGEENEDKLRNALEKLEKEKKTIEKLPDLKFEDKTKRL 236

Query: 210 RQACFKANYKKRKLSGTN------------NGSQYFSING 212
           RQACFKAN+K+++ SG +            + S Y S++G
Sbjct: 237 RQACFKANHKRKRRSGMSTPITSSSSSASASSSSYSSVSG 266

BLAST of Cp4.1LG18g07970 vs. TAIR10
Match: AT5G66990.1 (AT5G66990.1 RWP-RK domain-containing protein)

HSP 1 Score: 95.5 bits (236), Expect = 5.0e-20
Identity = 76/208 (36.54%), Postives = 101/208 (48.56%), Query Frame = 1

Query: 34  SFFDPKDIDPISSFISEDGGVGIWSELESEAFG-----VEEGGGENGNGGMGNE------ 93
           +F    D++ ISS  S D   G W+E            ++E    N  G    E      
Sbjct: 72  TFLASLDLEAISSTFSLDISSGWWNENNGNYNNQVEPNLDEISRTNTMGDPNMEQILHED 131

Query: 94  -GTMMRKAKRKCCRETSNGSGSGSASTKTLSREAISEYFYMPITQAAKQLNVGLTLLKKR 153
             TM  K  +K  R               +SRE + +YFYMPIT+AAK+LN+G+TLLKKR
Sbjct: 132 VNTMKEKTSQK--RIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKR 191

Query: 154 CRELD---------------------------GDQGVNKLSNVLKILENEKKLMEERPDL 203
           CREL                            G    +KL N L++LE EKK++EE PDL
Sbjct: 192 CRELGIPRWPHRKLTSLNALIANLKDLLGNTKGRTPKSKLRNALELLEMEKKMIEEVPDL 251

BLAST of Cp4.1LG18g07970 vs. TAIR10
Match: AT5G53040.1 (AT5G53040.1 RWP-RK domain-containing protein)

HSP 1 Score: 84.7 bits (208), Expect = 8.8e-17
Identity = 50/105 (47.62%), Postives = 64/105 (60.95%), Query Frame = 1

Query: 111 LSREAISEYFYMPITQAAKQLNVGLTLLKKRCREL-----------DGDQGVNKLSNV-- 170
           L    I ++F  PI +AAK+LNVGLT+LKKRCREL             +  +  L NV  
Sbjct: 148 LEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKNLKNVGM 207

Query: 171 ---LKILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLSG 200
              +K LE  + L+E+ PD +L D TK+LRQACFKANYK+RK  G
Sbjct: 208 EEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRKSLG 252

BLAST of Cp4.1LG18g07970 vs. NCBI nr
Match: gi|700208574|gb|KGN63670.1| (hypothetical protein Csa_1G009740 [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 1.6e-49
Identity = 140/296 (47.30%), Postives = 174/296 (58.78%), Query Frame = 1

Query: 3   NYSALDWN-CNFGFPDSFFDVVPLLESCTNNDSFFDPKDIDPISSFISEDGGVGIWSELE 62
           NYS LDWN  NFG  ++ F+           +SF DP+DI PI+++ISED  VGIW+E++
Sbjct: 40  NYSGLDWNYANFGLQENIFE-----------ESFLDPEDIVPINTYISEDE-VGIWNEMD 99

Query: 63  SEAFGVEEGG--------GENG-------NGGMGNEGTMMRKAKRKCCRETSNGSGSGSA 122
           +  FGV E          GEN        +   G + +M  K++ +C    SN +GS  +
Sbjct: 100 NGVFGVVEEEPPLLLLECGENEEKEEMVVSNKKGKKRSMRLKSENECSNNNSNNNGSCYS 159

Query: 123 STKTLSREAISEYFYMPITQAAKQLNVGLTLLKKRCREL--------------------- 182
           S+K LSR+ I EY+YMPITQAAK+LNVGLTLLKKRCREL                     
Sbjct: 160 SSKMLSRKVIQEYYYMPITQAAKELNVGLTLLKKRCRELGIGRWPHRKLMSIQTLIKNIK 219

Query: 183 ------DGDQGVN----KLSNVLKILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKR 242
                 D ++G      KL NVL+ILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKR
Sbjct: 220 ELIEKGDDEEGNGSENYKLKNVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKR 279

Query: 243 KLSG----TNNGSQYFSINGGMICRDDQEQGEEEEDDDEDDEEIKYLLMGCSFSSS 248
           KLSG     NN +    IN             +++D D+ DEE+KYLL  CSFSS+
Sbjct: 280 KLSGLIINNNNNNNIDDINSQSYF-SSSTTTIDDQDHDDYDEEMKYLLSDCSFSSA 322

BLAST of Cp4.1LG18g07970 vs. NCBI nr
Match: gi|778664690|ref|XP_011660335.1| (PREDICTED: protein RKD1-like [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 2.0e-47
Identity = 137/292 (46.92%), Postives = 171/292 (58.56%), Query Frame = 1

Query: 7   LDWN-CNFGFPDSFFDVVPLLESCTNNDSFFDPKDIDPISSFISEDGGVGIWSELESEAF 66
           LDWN  NFG  ++ F+           +SF DP+DI PI+++ISED  VGIW+E+++  F
Sbjct: 10  LDWNYANFGLQENIFE-----------ESFLDPEDIVPINTYISEDE-VGIWNEMDNGVF 69

Query: 67  GVEEGG--------GENG-------NGGMGNEGTMMRKAKRKCCRETSNGSGSGSASTKT 126
           GV E          GEN        +   G + +M  K++ +C    SN +GS  +S+K 
Sbjct: 70  GVVEEEPPLLLLECGENEEKEEMVVSNKKGKKRSMRLKSENECSNNNSNNNGSCYSSSKM 129

Query: 127 LSREAISEYFYMPITQAAKQLNVGLTLLKKRCREL------------------------- 186
           LSR+ I EY+YMPITQAAK+LNVGLTLLKKRCREL                         
Sbjct: 130 LSRKVIQEYYYMPITQAAKELNVGLTLLKKRCRELGIGRWPHRKLMSIQTLIKNIKELIE 189

Query: 187 --DGDQGVN----KLSNVLKILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLSG 246
             D ++G      KL NVL+ILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLSG
Sbjct: 190 KGDDEEGNGSENYKLKNVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLSG 249

Query: 247 ----TNNGSQYFSINGGMICRDDQEQGEEEEDDDEDDEEIKYLLMGCSFSSS 248
                NN +    IN             +++D D+ DEE+KYLL  CSFSS+
Sbjct: 250 LIINNNNNNNIDDINSQSYF-SSSTTTIDDQDHDDYDEEMKYLLSDCSFSSA 288

BLAST of Cp4.1LG18g07970 vs. NCBI nr
Match: gi|659107446|ref|XP_008453676.1| (PREDICTED: protein RKD1-like [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 3.4e-47
Identity = 140/295 (47.46%), Postives = 170/295 (57.63%), Query Frame = 1

Query: 2   DNYSALDWN-CNFGFPDSFFDVVPLLESCTNNDSFFDPKDIDPISSFISEDGGVGIWSEL 61
           ++YS LDWN  NFG  D+ F+           D F DPKDI PI+++ISEDG VGIW+ +
Sbjct: 36  NSYSGLDWNYTNFGLQDNIFE-----------DPFLDPKDIVPINTYISEDG-VGIWNGM 95

Query: 62  ESEAFGVEEGG-------GENGNGGMGNEGTMMRKAKRKCCRET---SNGSGSGS--AST 121
           +   F V E         GEN             K + KC +     SN S +GS  +S+
Sbjct: 96  DDGVFEVVEEEPLLLLECGENEEKEEMVVHNKKGKKRSKCLKSENVCSNNSNNGSCYSSS 155

Query: 122 KTLSREAISEYFYMPITQAAKQLNVGLTLLKKRCREL----------------------- 181
           K LS++ ISEYFYMPIT+AAK+LNVGLTLLKKRCREL                       
Sbjct: 156 KMLSKKVISEYFYMPITRAAKELNVGLTLLKKRCRELGIRRWPHRKLMSIQTLIKNVKEI 215

Query: 182 ---DGDQGVN----KLSNVLKILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLS 241
              D ++G      KL NVL+ILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLS
Sbjct: 216 EKGDEEEGNGSENCKLKNVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLS 275

Query: 242 G------TNNGSQYFSINGGMICRDDQEQGEEEEDDDEDDEEIKYLLMGCSFSSS 248
           G      +NN +    IN            + ++D D+ DEE+KYLL  CSFSS+
Sbjct: 276 GLIINNNSNNNNNIDDINSQNYFSSSTTTIDNQDDHDDYDEEMKYLLSDCSFSST 318

BLAST of Cp4.1LG18g07970 vs. NCBI nr
Match: gi|645269418|ref|XP_008239990.1| (PREDICTED: protein RKD1 [Prunus mume])

HSP 1 Score: 154.5 bits (389), Expect = 2.6e-34
Identity = 122/299 (40.80%), Postives = 153/299 (51.17%), Query Frame = 1

Query: 2   DNYSALDWNCNFGFP---DSFFDVVPLLE-SCTNNDSFFDPKDIDPISSFISEDG---GV 61
           + Y   DW      P   DSF D VP ++ SC N D  +   DI PI S    D    G 
Sbjct: 37  NGYGPFDWQYERTLPLVQDSFLDAVPFMDQSCLNIDPLYSSLDIQPIRSAFQGDELVLGN 96

Query: 62  GIWSELESEAFG--VEEGGG-----------------ENGNGGMGNEGTMMRKAKRKCCR 121
           G W  + ++ FG  +E                     ENG+     E T +   +     
Sbjct: 97  GNW--VCNDLFGELIEPSNNQQKQIQHQPPLLMCKNEENGSTENELEETKVISKRSHLST 156

Query: 122 ETSNGSGSGSASTKTLSREAISEYFYMPITQAAKQLNVGLTLLKKRCREL---------- 181
              + + +   S+K LSRE IS YFYMPITQAAK+LNVGLTLLKKRCREL          
Sbjct: 157 RLRSSNSTSLNSSKMLSRETISNYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKL 216

Query: 182 ---------------DGDQGVNKLSNVLKILENEKKLMEERPDLQLEDNTKRLRQACFKA 241
                          +G++   KL N +++LE E+KL+EE PD+QLEDNTKRLRQACFKA
Sbjct: 217 ASLQTLIRNIQDLGKEGEESEEKLRNAIELLERERKLLEEVPDMQLEDNTKRLRQACFKA 276

Query: 242 NYKKRKLSGTNNGSQYFSINGGMICRDDQ--EQGEEEEDDDEDDEEIKYLLMGCSFSSS 248
           NYKKRK+ G NN  Q  S     IC +++  E     +D  E+DEEIK LL   SFSSS
Sbjct: 277 NYKKRKIMGMNNLDQSQS---SFICSNNEIHEYASIMDDGYEEDEEIKSLLSD-SFSSS 329

BLAST of Cp4.1LG18g07970 vs. NCBI nr
Match: gi|590667971|ref|XP_007037362.1| (RWP-RK domain-containing protein, putative [Theobroma cacao])

HSP 1 Score: 151.8 bits (382), Expect = 1.7e-33
Identity = 117/281 (41.64%), Postives = 154/281 (54.80%), Query Frame = 1

Query: 4   YSALDWNCNFGFPDSFFDVVPLLESCTNNDSFFDPKDIDPISSFISEDGGVGIWSELESE 63
           Y+++DW   F   +SFFD +PL+ S    D  +D  D +  SS I +     +    E+ 
Sbjct: 39  YNSVDWQNEFPIQESFFDALPLMSSFYT-DPLYDSLDFEKSSSLIQDH----LTIVAENN 98

Query: 64  AFGVEEGGG----------ENG-NGGMGNEGTMMRKAKRKCCRETSNGSGSGSASTKTLS 123
             G E+G G           NG N   G E    R+AKR  CRE         +S+  LS
Sbjct: 99  LLGCEKGNGFWNELGALFKPNGKNEDFGEELKEERRAKR--CREEK------CSSSTMLS 158

Query: 124 REAISEYFYMPITQAAKQLNVGLTLLKKRCREL--------------------------D 183
           R+ IS+YFY+PITQAAK+LNVGLTLLKKRCREL                          +
Sbjct: 159 RKVISQYFYLPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLIWNVQELQKEE 218

Query: 184 GDQGVNKLSNVLKILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKLSGTNNGSQY 243
           G++   KL   +++LE E+KL+EE PDLQLED TKRLRQACFKANYKKRKL    + S  
Sbjct: 219 GEESERKLREAVEVLERERKLLEEMPDLQLEDKTKRLRQACFKANYKKRKLMMMESQSS- 278

Query: 244 FSINGGMICRDDQEQGEEEEDDDEDDEEIKYLLMGCSFSSS 248
              +GG     D  +G + E ++ED+EE+K LL+  SFSS+
Sbjct: 279 ---SGGSRESLDLTRGYDME-NEEDEEEMK-LLLSDSFSST 300

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RKD2_ARATH1.6e-2336.73Protein RKD2 OS=Arabidopsis thaliana GN=RKD2 PE=2 SV=1[more]
RKD1_ARATH2.6e-2339.55Protein RKD1 OS=Arabidopsis thaliana GN=RKD1 PE=3 SV=1[more]
RKD3_ARATH8.8e-1936.54Protein RKD3 OS=Arabidopsis thaliana GN=RKD3 PE=3 SV=1[more]
RKD4_ARATH1.6e-1547.62Protein RKD4 OS=Arabidopsis thaliana GN=RKD4 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LP42_CUCSA1.1e-4947.30Uncharacterized protein OS=Cucumis sativus GN=Csa_1G009740 PE=4 SV=1[more]
A0A061FXS1_THECC1.2e-3341.64RWP-RK domain-containing protein, putative OS=Theobroma cacao GN=TCM_014009 PE=4... [more]
A0A151SLB7_CAJCA4.1e-3139.34Uncharacterized protein OS=Cajanus cajan GN=KK1_001754 PE=4 SV=1[more]
W9QYQ3_9ROSA7.0e-3139.06Uncharacterized protein OS=Morus notabilis GN=L484_015950 PE=4 SV=1[more]
A0A0R0JQB7_SOYBN7.0e-3137.31Uncharacterized protein OS=Glycine max GN=GLYMA_05G026500 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G74480.18.7e-2536.73 RWP-RK domain-containing protein[more]
AT1G18790.11.5e-2439.55 RWP-RK domain-containing protein[more]
AT5G66990.15.0e-2036.54 RWP-RK domain-containing protein[more]
AT5G53040.18.8e-1747.62 RWP-RK domain-containing protein[more]
Match NameE-valueIdentityDescription
gi|700208574|gb|KGN63670.1|1.6e-4947.30hypothetical protein Csa_1G009740 [Cucumis sativus][more]
gi|778664690|ref|XP_011660335.1|2.0e-4746.92PREDICTED: protein RKD1-like [Cucumis sativus][more]
gi|659107446|ref|XP_008453676.1|3.4e-4747.46PREDICTED: protein RKD1-like [Cucumis melo][more]
gi|645269418|ref|XP_008239990.1|2.6e-3440.80PREDICTED: protein RKD1 [Prunus mume][more]
gi|590667971|ref|XP_007037362.1|1.7e-3341.64RWP-RK domain-containing protein, putative [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009308 amine metabolic process
biological_process GO:0051301 cell division
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006997 nucleus organization
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0005507 copper ion binding
molecular_function GO:0048038 quinone binding
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g07970.1Cp4.1LG18g07970.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 110..145
score: 1.3
NoneNo IPR availableunknownCoilCoilcoord: 151..171
scor
NoneNo IPR availablePANTHERPTHR10270SOX TRANSCRIPTION FACTORcoord: 40..218
score: 1.6

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG18g07970Cp4.1LG04g14960Cucurbita pepo (Zucchini)cpecpeB361