Bhi02G000228 (gene) Wax gourd

NameBhi02G000228
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionRWP-RK domain containing protein
Locationchr2 : 5973502 .. 5973931 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATGAAATCAAATATTGTAATAGGCTAATTATATTGTGGTAGGTAGTGTTTAATAGAAGAGAAAATTGTTGGGAAATGAATGGATGAATGCAGGAGATTCAAAAGGGAGAGGAAGATGGAAATGGAGAAAATAAGTTGAAGAATGTATTGGAAATATTAGAGACTGAGAAGAAGTTGATGGAGGAGAGACCAGATTTGCAATTAGAGGACAACACAAAGAGGCTTAGACAAGCTTGTTTCAAAGCCAACTACAAGAAGAAAAAGCTCTCTGGAATAATGATCAATAATAATGAACATGATTCTCAATATTTCTCTTCCTCCACCACCACCACCATTCACGATCATGAGGAAGAATATGATGATGAAGAAATGAAATATCTCTTGTCAGATTGCTCCTTTTCCTCAAGTAACACCCTCTTCATGTAA

mRNA sequence

ATGGAGATTCAAAAGGGAGAGGAAGATGGAAATGGAGAAAATAAGTTGAAGAATGTATTGGAAATATTAGAGACTGAGAAGAAGTTGATGGAGGAGAGACCAGATTTGCAATTAGAGGACAACACAAAGAGGCTTAGACAAGCTTGTTTCAAAGCCAACTACAAGAAGAAAAAGCTCTCTGGAATAATGATCAATAATAATGAACATGATTCTCAATATTTCTCTTCCTCCACCACCACCACCATTCACGATCATGAGGAAGAATATGATGATGAAGAAATGAAATATCTCTTGTCAGATTGCTCCTTTTCCTCAAGTAACACCCTCTTCATGTAA

Coding sequence (CDS)

ATGGAGATTCAAAAGGGAGAGGAAGATGGAAATGGAGAAAATAAGTTGAAGAATGTATTGGAAATATTAGAGACTGAGAAGAAGTTGATGGAGGAGAGACCAGATTTGCAATTAGAGGACAACACAAAGAGGCTTAGACAAGCTTGTTTCAAAGCCAACTACAAGAAGAAAAAGCTCTCTGGAATAATGATCAATAATAATGAACATGATTCTCAATATTTCTCTTCCTCCACCACCACCACCATTCACGATCATGAGGAAGAATATGATGATGAAGAAATGAAATATCTCTTGTCAGATTGCTCCTTTTCCTCAAGTAACACCCTCTTCATGTAA

Protein sequence

MEIQKGEEDGNGENKLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYKKKKLSGIMINNNEHDSQYFSSSTTTTIHDHEEEYDDEEMKYLLSDCSFSSSNTLFM
BLAST of Bhi02G000228 vs. Swiss-Prot
Match: sp|Q9FGD1|RKD3_ARATH (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = 0

Query: 13  ENKLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK 56
           ++KL+N LE+LE EKK++EE PDL+  D TKRLRQACFKA YK
Sbjct: 226 KSKLRNALELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYK 268

BLAST of Bhi02G000228 vs. Swiss-Prot
Match: sp|Q9CA66|RKD2_ARATH (Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-08
Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 0

Query: 2   EIQKGEEDGNGENKLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK 56
           E+QK E + N E KL++ LE+LE EK+ +E+ PDL+ +D TKRLRQACFKAN+K
Sbjct: 191 ELQKMEGEENAE-KLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHK 243

BLAST of Bhi02G000228 vs. Swiss-Prot
Match: sp|Q9LVU8|RKD4_ARATH (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.1e-04
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0

Query: 13  ENKLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK 56
           E ++KN    LE  + L+E+ PD +L D TK+LRQACFKANYK
Sbjct: 208 EEEVKN----LEEHRFLIEQEPDAELSDGTKKLRQACFKANYK 246

BLAST of Bhi02G000228 vs. TAIR10
Match: AT5G66990.1 (RWP-RK domain-containing protein)

HSP 1 Score: 60.8 bits (146), Expect = 5.9e-10
Identity = 29/43 (67.44%), Postives = 36/43 (83.72%), Query Frame = 0

Query: 13  ENKLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK 56
           ++KL+N LE+LE EKK++EE PDL+  D TKRLRQACFKA YK
Sbjct: 226 KSKLRNALELLEMEKKMIEEVPDLEFGDKTKRLRQACFKAKYK 268

BLAST of Bhi02G000228 vs. TAIR10
Match: AT1G74480.1 (RWP-RK domain-containing protein)

HSP 1 Score: 60.5 bits (145), Expect = 7.8e-10
Identity = 32/54 (59.26%), Postives = 43/54 (79.63%), Query Frame = 0

Query: 2   EIQKGEEDGNGENKLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK 56
           E+QK E + N E KL++ LE+LE EK+ +E+ PDL+ +D TKRLRQACFKAN+K
Sbjct: 191 ELQKMEGEENAE-KLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHK 243

BLAST of Bhi02G000228 vs. TAIR10
Match: AT5G53040.1 (RWP-RK domain-containing protein)

HSP 1 Score: 46.6 bits (109), Expect = 1.2e-05
Identity = 24/43 (55.81%), Postives = 31/43 (72.09%), Query Frame = 0

Query: 13  ENKLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK 56
           E ++KN    LE  + L+E+ PD +L D TK+LRQACFKANYK
Sbjct: 208 EEEVKN----LEEHRFLIEQEPDAELSDGTKKLRQACFKANYK 246

BLAST of Bhi02G000228 vs. TAIR10
Match: AT1G18790.1 (RWP-RK domain-containing protein)

HSP 1 Score: 43.9 bits (102), Expect = 7.5e-05
Identity = 26/54 (48.15%), Postives = 33/54 (61.11%), Query Frame = 0

Query: 2   EIQKGEEDGNGENKLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK 56
           E++K E + N E+KL+N               PDL+ ED TKRLRQACFKAN+K
Sbjct: 184 ELEKMEGEEN-EDKLRNXXXXXXXXXXXXXXXPDLKFEDKTKRLRQACFKANHK 236

BLAST of Bhi02G000228 vs. TrEMBL
Match: tr|A0A1S3BWU6|A0A1S3BWU6_CUCME (protein RKD1-like OS=Cucumis melo OX=3656 GN=LOC103494325 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-15
Identity = 102/122 (83.61%), Postives = 106/122 (86.89%), Query Frame = 0

Query: 2   EIQKG-EEDGNG-EN-KLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK--- 61
           EI+KG EE+GNG EN KLKNVLEILE EKKLMEERPDLQLEDNTKRLRQACFKANYK   
Sbjct: 202 EIEKGDEEEGNGSENCKLKNVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRK 261

Query: 62  ------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLLSDCSFSSSNTL 112
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  YLLSDCSFSS+N +
Sbjct: 262 LSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKYLLSDCSFSSTNCM 321

BLAST of Bhi02G000228 vs. TrEMBL
Match: tr|A0A0A0LP42|A0A0A0LP42_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009740 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.3e-15
Identity = 99/118 (83.90%), Postives = 104/118 (88.14%), Query Frame = 0

Query: 3   IQKG-EEDGNG-EN-KLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK---- 62
           I+KG +E+GNG EN KLKNVLEILE EKKLMEERPDLQLEDNTKRLRQACFKANYK    
Sbjct: 210 IEKGDDEEGNGSENYKLKNVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKL 269

Query: 63  --XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLLSDCSFSSSNTLFM 112
             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   YLLSDCSFSS+N +FM
Sbjct: 270 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMKYLLSDCSFSSANCMFM 327

BLAST of Bhi02G000228 vs. TrEMBL
Match: tr|A0A2P6P2Q2|A0A2P6P2Q2_ROSCH (Putative transcription factor Nin-like family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0181471 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-11
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 3   IQKGEEDGNGENKLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK 56
           I  G+E+   E KL+N +E+LE EKKLMEE PD+QLEDNTKRLRQACFKANYK
Sbjct: 216 INLGKEEEENEEKLRNAIELLEREKKLMEEAPDMQLEDNTKRLRQACFKANYK 268

BLAST of Bhi02G000228 vs. TrEMBL
Match: tr|A0A2I4F4I4|A0A2I4F4I4_9ROSI (protein RKD2-like OS=Juglans regia OX=51240 GN=LOC108995442 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.9e-10
Identity = 38/55 (69.09%), Postives = 44/55 (80.00%), Query Frame = 0

Query: 1   MEIQKGEEDGNGENKLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK 56
           +E+   EE    E KL+N +EILE EKKL+EE PD+QLEDNTKRLRQACFKANYK
Sbjct: 206 IEVLGKEEGEESEAKLRNAIEILEREKKLLEEIPDMQLEDNTKRLRQACFKANYK 260

BLAST of Bhi02G000228 vs. TrEMBL
Match: tr|A0A2N9H073|A0A2N9H073_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32866 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.5e-10
Identity = 38/54 (70.37%), Postives = 46/54 (85.19%), Query Frame = 0

Query: 2   EIQKGEEDGNGENKLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK 56
           EI K EE  + E KL+N ++ILE+E+KL+EE PD+QLEDNTKRLRQACFKANYK
Sbjct: 202 EIAK-EEGEDSEGKLRNAIQILESERKLLEEVPDMQLEDNTKRLRQACFKANYK 254

BLAST of Bhi02G000228 vs. NCBI nr
Match: XP_008453676.1 (PREDICTED: protein RKD1-like [Cucumis melo])

HSP 1 Score: 91.7 bits (226), Expect = 1.7e-15
Identity = 102/122 (83.61%), Postives = 106/122 (86.89%), Query Frame = 0

Query: 2   EIQKG-EEDGNG-EN-KLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK--- 61
           EI+KG EE+GNG EN KLKNVLEILE EKKLMEERPDLQLEDNTKRLRQACFKANYK   
Sbjct: 202 EIEKGDEEEGNGSENCKLKNVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRK 261

Query: 62  ------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLLSDCSFSSSNTL 112
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  YLLSDCSFSS+N +
Sbjct: 262 LSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKYLLSDCSFSSTNCM 321

BLAST of Bhi02G000228 vs. NCBI nr
Match: KGN63670.1 (hypothetical protein Csa_1G009740 [Cucumis sativus])

HSP 1 Score: 90.1 bits (222), Expect = 5.0e-15
Identity = 99/118 (83.90%), Postives = 104/118 (88.14%), Query Frame = 0

Query: 3   IQKG-EEDGNG-EN-KLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK---- 62
           I+KG +E+GNG EN KLKNVLEILE EKKLMEERPDLQLEDNTKRLRQACFKANYK    
Sbjct: 210 IEKGDDEEGNGSENYKLKNVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKL 269

Query: 63  --XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLLSDCSFSSSNTLFM 112
             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   YLLSDCSFSS+N +FM
Sbjct: 270 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMKYLLSDCSFSSANCMFM 327

BLAST of Bhi02G000228 vs. NCBI nr
Match: XP_011660335.1 (PREDICTED: protein RKD1-like [Cucumis sativus])

HSP 1 Score: 90.1 bits (222), Expect = 5.0e-15
Identity = 99/118 (83.90%), Postives = 104/118 (88.14%), Query Frame = 0

Query: 3   IQKG-EEDGNG-EN-KLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK---- 62
           I+KG +E+GNG EN KLKNVLEILE EKKLMEERPDLQLEDNTKRLRQACFKANYK    
Sbjct: 176 IEKGDDEEGNGSENYKLKNVLEILENEKKLMEERPDLQLEDNTKRLRQACFKANYKKRKL 235

Query: 63  --XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLLSDCSFSSSNTLFM 112
             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   YLLSDCSFSS+N +FM
Sbjct: 236 SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMKYLLSDCSFSSANCMFM 293

BLAST of Bhi02G000228 vs. NCBI nr
Match: XP_022134755.1 (protein RKD1-like [Momordica charantia])

HSP 1 Score: 84.0 bits (206), Expect = 3.6e-13
Identity = 44/54 (81.48%), Postives = 50/54 (92.59%), Query Frame = 0

Query: 2   EIQKGEEDGNGENKLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK 56
           E+++GEE+ NG  KL+NVLEILE EKK+MEERPDLQLEDNTKRLRQACFKANYK
Sbjct: 189 ELREGEEERNGV-KLRNVLEILEEEKKVMEERPDLQLEDNTKRLRQACFKANYK 241

BLAST of Bhi02G000228 vs. NCBI nr
Match: XP_022921381.1 (protein RKD2-like [Cucurbita moschata])

HSP 1 Score: 82.0 bits (201), Expect = 1.4e-12
Identity = 44/54 (81.48%), Postives = 47/54 (87.04%), Query Frame = 0

Query: 2   EIQKGEEDGNGENKLKNVLEILETEKKLMEERPDLQLEDNTKRLRQACFKANYK 56
           E+QK E+   G NKL NVL+ILE EKKLMEERPDLQLEDNTKRLRQACFKANYK
Sbjct: 195 ELQK-EDGDQGVNKLSNVLKILENEKKLMEERPDLQLEDNTKRLRQACFKANYK 247

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
sp|Q9FGD1|RKD3_ARATH1.1e-0867.44Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1[more]
sp|Q9CA66|RKD2_ARATH1.4e-0859.26Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1[more]
sp|Q9LVU8|RKD4_ARATH2.1e-0455.81Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT5G66990.15.9e-1067.44RWP-RK domain-containing protein[more]
AT1G74480.17.8e-1059.26RWP-RK domain-containing protein[more]
AT5G53040.11.2e-0555.81RWP-RK domain-containing protein[more]
AT1G18790.17.5e-0548.15RWP-RK domain-containing protein[more]
Match NameE-valueIdentityDescription
tr|A0A1S3BWU6|A0A1S3BWU6_CUCME1.1e-1583.61protein RKD1-like OS=Cucumis melo OX=3656 GN=LOC103494325 PE=4 SV=1[more]
tr|A0A0A0LP42|A0A0A0LP42_CUCSA3.3e-1583.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009740 PE=4 SV=1[more]
tr|A0A2P6P2Q2|A0A2P6P2Q2_ROSCH1.7e-1171.70Putative transcription factor Nin-like family OS=Rosa chinensis OX=74649 GN=Rchi... [more]
tr|A0A2I4F4I4|A0A2I4F4I4_9ROSI1.9e-1069.09protein RKD2-like OS=Juglans regia OX=51240 GN=LOC108995442 PE=4 SV=1[more]
tr|A0A2N9H073|A0A2N9H073_FAGSY5.5e-1070.37Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32866 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_008453676.11.7e-1583.61PREDICTED: protein RKD1-like [Cucumis melo][more]
KGN63670.15.0e-1583.90hypothetical protein Csa_1G009740 [Cucumis sativus][more]
XP_011660335.15.0e-1583.90PREDICTED: protein RKD1-like [Cucumis sativus][more]
XP_022134755.13.6e-1381.48protein RKD1-like [Momordica charantia][more]
XP_022921381.11.4e-1281.48protein RKD2-like [Cucurbita moschata][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009308 amine metabolic process
biological_process GO:0051301 cell division
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0006997 nucleus organization
biological_process GO:0009987 cellular process
biological_process GO:0009790 embryo development
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0005507 copper ion binding
molecular_function GO:0048038 quinone binding
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi02M000228Bhi02M000228mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi02G000228Wax gourdwgowgoB121
Bhi02G000228Wax gourdwgowgoB125
Bhi02G000228Cucumber (Gy14) v1cgywgoB188
Bhi02G000228Cucumber (Gy14) v1cgywgoB585
Bhi02G000228Cucumber (Gy14) v1cgywgoB693
Bhi02G000228Cucumber (Gy14) v2cgybwgoB107
Bhi02G000228Cucurbita maxima (Rimu)cmawgoB0631
Bhi02G000228Cucurbita maxima (Rimu)cmawgoB0916
Bhi02G000228Cucurbita moschata (Rifu)cmowgoB0355
Bhi02G000228Cucurbita moschata (Rifu)cmowgoB0631
Bhi02G000228Cucurbita pepo (Zucchini)cpewgoB0737
Bhi02G000228Cucurbita moschata (Rifu)cmowgoB0917
Bhi02G000228Cucurbita pepo (Zucchini)cpewgoB0062
Bhi02G000228Cucurbita pepo (Zucchini)cpewgoB0581
Bhi02G000228Cucurbita pepo (Zucchini)cpewgoB0824
Bhi02G000228Wild cucumber (PI 183967)cpiwgoB116
Bhi02G000228Wild cucumber (PI 183967)cpiwgoB528
Bhi02G000228Cucumber (Chinese Long) v3cucwgoB103
Bhi02G000228Cucumber (Chinese Long) v3cucwgoB121
Bhi02G000228Cucumber (Chinese Long) v3cucwgoB125
Bhi02G000228Cucumber (Chinese Long) v3cucwgoB537
Bhi02G000228Cucumber (Chinese Long) v2cuwgoB115
Bhi02G000228Cucumber (Chinese Long) v2cuwgoB525
Bhi02G000228Bottle gourd (USVL1VR-Ls)lsiwgoB291
Bhi02G000228Bottle gourd (USVL1VR-Ls)lsiwgoB408
Bhi02G000228Melon (DHL92) v3.6.1medwgoB090
Bhi02G000228Melon (DHL92) v3.6.1medwgoB194
Bhi02G000228Melon (DHL92) v3.6.1medwgoB446
Bhi02G000228Melon (DHL92) v3.5.1mewgoB089
Bhi02G000228Melon (DHL92) v3.5.1mewgoB192
Bhi02G000228Watermelon (Charleston Gray)wcgwgoB407
Bhi02G000228Watermelon (Charleston Gray)wcgwgoB487
Bhi02G000228Watermelon (Charleston Gray)wcgwgoB541
Bhi02G000228Watermelon (97103) v2wgowmbB644
Bhi02G000228Watermelon (97103) v2wgowmbB647
Bhi02G000228Watermelon (97103) v1wgowmB671
Bhi02G000228Watermelon (97103) v1wgowmB666
Bhi02G000228Silver-seed gourdcarwgoB0063