CsGy1G000590 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G000590
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 326150 .. 326704 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTTTGGTTCAATCTTAGGCGTTCAAAATGCGGACTTTGGCAAAGTGGAGGGTTGTGATGGTGGAGGTGTAATGGTCAACATAGATCGGCGTTCTTTTTACACGTACAGCACTCTAATGCTTATCCAAGATTTGTCGAATTGCAAATAAAGAAACCACTTTTTCTTCTTTCTTCTTATCCTAAGTTTACACTGCTGACCAGTGGCGGGCCATGCTAACGTGCGCCGGACCCGCATCTTGCTTACTGCTTTTGTCTTTACTTTCTTTTGTTGTTGATGTGGCGCCATCTCATGGGCTCTTCGCGTGCTGCCGTGGCGGCCACGAACTGAATCTGCTTCGTCTCTTATGCTTTTTGTGTATATTCAATTTGATAGAGTGGGCCGTTAGGTGCATGCGTGCAGGCTCAGTCCATTGCTAGAATTCACAAGCACTTCTGGCGTATTTCAGTTGGGAATTCTCCTAATAATATGCATTGTGGCTTTTAGTTTTTCTTAATTCAATCCTTAGGAGGTAGATGGGATGTTGGAAGAAGATCCAGCCATTAGTATATGA

mRNA sequence

ATGTCGTTTGGTTCAATCTTAGGCGTTCAAAATGCGGACTTTGGCAAAGTGGAGGGTTGTGATGGTGGAGGTGTAATGGTCAACATAGATCGGCTTTACACTGCTGACCAGTGGCGGGCCATGCTAACGTGCGCCGGACCCGCATCTTGCTTACTGCTTTTGTCTTTACTTTCTTTTGTTGTTGATGTGGCGCCATCTCATGGGCTCTTCGCGTGCTGCCGTGGCGGCCACGAACTGAATCTGCTTCGTCTCTTATGCTTTTTGTGTATATTCAATTTGATAGAGTGGGCCGTTAGGTGCATGCGTGCAGGCTCAGAGGTAGATGGGATGTTGGAAGAAGATCCAGCCATTAGTATATGA

Coding sequence (CDS)

ATGTCGTTTGGTTCAATCTTAGGCGTTCAAAATGCGGACTTTGGCAAAGTGGAGGGTTGTGATGGTGGAGGTGTAATGGTCAACATAGATCGGCTTTACACTGCTGACCAGTGGCGGGCCATGCTAACGTGCGCCGGACCCGCATCTTGCTTACTGCTTTTGTCTTTACTTTCTTTTGTTGTTGATGTGGCGCCATCTCATGGGCTCTTCGCGTGCTGCCGTGGCGGCCACGAACTGAATCTGCTTCGTCTCTTATGCTTTTTGTGTATATTCAATTTGATAGAGTGGGCCGTTAGGTGCATGCGTGCAGGCTCAGAGGTAGATGGGATGTTGGAAGAAGATCCAGCCATTAGTATATGA

Protein sequence

MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFVVDVAPSHGLFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI
Homology
[Close]
BLAST of CsGy1G000590 vs. NCBI nr
Match: KGN63487.1 (hypothetical protein Csa_1G002070 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 1.2e-62
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV 60
           MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV
Sbjct: 1   MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV 60

Query: 61  VDVAPSHGLFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI 120
           VDVAPSHGLFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI
Sbjct: 61  VDVAPSHGLFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI 119

[Close]
BLAST of CsGy1G000590 vs. TrEMBL
Match: tr|A0A0A0LRT4|A0A0A0LRT4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002070 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 7.9e-63
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV 60
           MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV
Sbjct: 1   MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV 60

Query: 61  VDVAPSHGLFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI 120
           VDVAPSHGLFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI
Sbjct: 61  VDVAPSHGLFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI 119

The following BLAST results are available for this feature:
BLAST of CsGy1G000590 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63487.11.2e-62100.00hypothetical protein Csa_1G002070 [Cucumis sativus][more]
BLAST of CsGy1G000590 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G000590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G000590 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LRT4|A0A0A0LRT4_CUCSA7.9e-63100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002070 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G000590.1CsGy1G000590.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G000590Csa1G002070Cucumber (Chinese Long) v2cgybcuB001
CsGy1G000590CSPI01G00580Wild cucumber (PI 183967)cgybcpiB001
CsGy1G000590CsaV3_1G000610Cucumber (Chinese Long) v3cgybcucB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G000590Wax gourdcgybwgoB076
CsGy1G000590Wax gourdcgybwgoB060
CsGy1G000590Wax gourdcgybwgoB077
CsGy1G000590Melon (DHL92) v3.6.1cgybmedB043
CsGy1G000590Cucumber (Gy14) v2cgybcgybB005
CsGy1G000590Cucumber (Gy14) v2cgybcgybB015
CsGy1G000590Cucurbita maxima (Rimu)cgybcmaB004
CsGy1G000590Cucurbita maxima (Rimu)cgybcmaB028
CsGy1G000590Cucurbita maxima (Rimu)cgybcmaB045
CsGy1G000590Cucurbita maxima (Rimu)cgybcmaB081
CsGy1G000590Cucurbita maxima (Rimu)cgybcmaB082
CsGy1G000590Cucurbita moschata (Rifu)cgybcmoB005
CsGy1G000590Cucurbita moschata (Rifu)cgybcmoB028
CsGy1G000590Cucurbita moschata (Rifu)cgybcmoB032
CsGy1G000590Cucurbita moschata (Rifu)cgybcmoB076
CsGy1G000590Cucurbita moschata (Rifu)cgybcmoB078
CsGy1G000590Cucurbita moschata (Rifu)cgybcmoB097
CsGy1G000590Cucurbita pepo (Zucchini)cgybcpeB015
CsGy1G000590Cucurbita pepo (Zucchini)cgybcpeB053
CsGy1G000590Cucurbita pepo (Zucchini)cgybcpeB078
CsGy1G000590Cucurbita pepo (Zucchini)cgybcpeB106
CsGy1G000590Cucurbita pepo (Zucchini)cgybcpeB117
CsGy1G000590Cucurbita pepo (Zucchini)cgybcpeB126
CsGy1G000590Cucumber (Chinese Long) v2cgybcuB012
CsGy1G000590Cucumber (Chinese Long) v2cgybcuB022
CsGy1G000590Bottle gourd (USVL1VR-Ls)cgyblsiB035
CsGy1G000590Bottle gourd (USVL1VR-Ls)cgyblsiB067
CsGy1G000590Melon (DHL92) v3.5.1cgybmeB020
CsGy1G000590Melon (DHL92) v3.5.1cgybmeB048
CsGy1G000590Melon (DHL92) v3.6.1cgybmedB017
CsGy1G000590Watermelon (Charleston Gray)cgybwcgB048
CsGy1G000590Watermelon (Charleston Gray)cgybwcgB062
CsGy1G000590Watermelon (Charleston Gray)cgybwcgB078
CsGy1G000590Watermelon (97103) v1cgybwmB028
CsGy1G000590Watermelon (97103) v1cgybwmB094
CsGy1G000590Wild cucumber (PI 183967)cgybcpiB012
CsGy1G000590Wild cucumber (PI 183967)cgybcpiB019
CsGy1G000590Silver-seed gourdcarcgybB0371
CsGy1G000590Silver-seed gourdcarcgybB0442
CsGy1G000590Silver-seed gourdcarcgybB1031
CsGy1G000590Cucumber (Chinese Long) v3cgybcucB011
CsGy1G000590Cucumber (Chinese Long) v3cgybcucB026
CsGy1G000590Watermelon (97103) v2cgybwmbB076
CsGy1G000590Watermelon (97103) v2cgybwmbB048
CsGy1G000590Watermelon (97103) v2cgybwmbB062