CsGy1G000590.1 (mRNA) Cucumber (Gy14) v2

Overview
NameCsGy1G000590.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 326150 .. 326704 (+)
Sequence length360
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTTTGGTTCAATCTTAGGCGTTCAAAATGCGGACTTTGGCAAAGTGGAGGGTTGTGATGGTGGAGGTGTAATGGTCAACATAGATCGGCGTTCTTTTTACACGTACAGCACTCTAATGCTTATCCAAGATTTGTCGAATTGCAAATAAAGAAACCACTTTTTCTTCTTTCTTCTTATCCTAAGTTTACACTGCTGACCAGTGGCGGGCCATGCTAACGTGCGCCGGACCCGCATCTTGCTTACTGCTTTTGTCTTTACTTTCTTTTGTTGTTGATGTGGCGCCATCTCATGGGCTCTTCGCGTGCTGCCGTGGCGGCCACGAACTGAATCTGCTTCGTCTCTTATGCTTTTTGTGTATATTCAATTTGATAGAGTGGGCCGTTAGGTGCATGCGTGCAGGCTCAGTCCATTGCTAGAATTCACAAGCACTTCTGGCGTATTTCAGTTGGGAATTCTCCTAATAATATGCATTGTGGCTTTTAGTTTTTCTTAATTCAATCCTTAGGAGGTAGATGGGATGTTGGAAGAAGATCCAGCCATTAGTATATGA

mRNA sequence

ATGTCGTTTGGTTCAATCTTAGGCGTTCAAAATGCGGACTTTGGCAAAGTGGAGGGTTGTGATGGTGGAGGTGTAATGGTCAACATAGATCGGCTTTACACTGCTGACCAGTGGCGGGCCATGCTAACGTGCGCCGGACCCGCATCTTGCTTACTGCTTTTGTCTTTACTTTCTTTTGTTGTTGATGTGGCGCCATCTCATGGGCTCTTCGCGTGCTGCCGTGGCGGCCACGAACTGAATCTGCTTCGTCTCTTATGCTTTTTGTGTATATTCAATTTGATAGAGTGGGCCGTTAGGTGCATGCGTGCAGGCTCAGAGGTAGATGGGATGTTGGAAGAAGATCCAGCCATTAGTATATGA

Coding sequence (CDS)

ATGTCGTTTGGTTCAATCTTAGGCGTTCAAAATGCGGACTTTGGCAAAGTGGAGGGTTGTGATGGTGGAGGTGTAATGGTCAACATAGATCGGCTTTACACTGCTGACCAGTGGCGGGCCATGCTAACGTGCGCCGGACCCGCATCTTGCTTACTGCTTTTGTCTTTACTTTCTTTTGTTGTTGATGTGGCGCCATCTCATGGGCTCTTCGCGTGCTGCCGTGGCGGCCACGAACTGAATCTGCTTCGTCTCTTATGCTTTTTGTGTATATTCAATTTGATAGAGTGGGCCGTTAGGTGCATGCGTGCAGGCTCAGAGGTAGATGGGATGTTGGAAGAAGATCCAGCCATTAGTATATGA

Protein sequence

MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFVVDVAPSHGLFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI
Homology
[Close]
BLAST of CsGy1G000590.1 vs. NCBI nr
Match: KGN63487.1 (hypothetical protein Csa_1G002070 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 1.2e-62
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV 60
           MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV
Sbjct: 1   MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV 60

Query: 61  VDVAPSHGLFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI 120
           VDVAPSHGLFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI
Sbjct: 61  VDVAPSHGLFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI 119

[Close]
BLAST of CsGy1G000590.1 vs. TrEMBL
Match: tr|A0A0A0LRT4|A0A0A0LRT4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002070 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 7.9e-63
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 

Query: 1   MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV 60
           MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV
Sbjct: 1   MSFGSILGVQNADFGKVEGCDGGGVMVNIDRLYTADQWRAMLTCAGPASCLLLLSLLSFV 60

Query: 61  VDVAPSHGLFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI 120
           VDVAPSHGLFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI
Sbjct: 61  VDVAPSHGLFACCRGGHELNLLRLLCFLCIFNLIEWAVRCMRAGSEVDGMLEEDPAISI 119

The following BLAST results are available for this feature:
BLAST of CsGy1G000590.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63487.11.2e-62100.00hypothetical protein Csa_1G002070 [Cucumis sativus][more]
BLAST of CsGy1G000590.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G000590.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G000590.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LRT4|A0A0A0LRT4_CUCSA7.9e-63100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G002070 PE=4 SV=1[more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy1G000590CsGy1G000590gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy1G000590.1CsGy1G000590.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy1G000590.1.exon.1CsGy1G000590.1.exon.1exon
CsGy1G000590.1.exon.2CsGy1G000590.1.exon.2exon
CsGy1G000590.1.exon.3CsGy1G000590.1.exon.3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy1G000590.1.CDS.1CsGy1G000590.1.CDS.1CDS
CsGy1G000590.1.CDS.2CsGy1G000590.1.CDS.2CDS
CsGy1G000590.1.CDS.3CsGy1G000590.1.CDS.3CDS