Cp4.1LG20g03470 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG20g03470
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionHigh affinity nitrate transporter
LocationCp4.1LG20 : 1957893 .. 1959234 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGTCATCGTCGTCGTCGTCCTCAAGTCTGCTGAAATATGGAGGGTTCAATCAATATGTCTGCTAATGGGTTTCTCTTGGCTGCTCTGTTTCTGTTCTGTTTCTTCGGATTCTCTCATGGACATATCCACTTTTCGTCTCTTCCAAGAAGTTTGGAGGTCACTGCTTCGCCTAAACCTGGACAAGGTAAGATTTTTCAGCCCCACCTTTAGATATTTGTAACACCTTTAGATATCTTGTAACATTTTCCTAATAGACACGTTGTGTGGAAGCCAAGAGGGAAAGCCAAAAAGAAGAATATCTACGTTGATGAGTTTGGGCAGTTACAAATAGTAATAGAGTCAGTGATAAGGCTGAGTTCCGAAGGGGGATGAATAGGGGGCGGTGTGACAACAAGAACGCTGCCCGAAGGGGGATGGATAGGGAGCGGTGTGACAACAAGAACGCTGGACCCAAAGGGATGGATTTGGGGTGGACGGTGAAATCACACCTCGAAGAGAGAAAAGTTTTGAAAACTCGAAAGGGAAAGCATATCGATCTGAATCCAAAATTGGAACTTTACCCATTTCTAACAACTGGGTTGTCTTTTTTTTCTGCAGTTCTCAAAGCGGGTGTTGATAAAATCAGTGTGACCTGGATTCTAAACGGGACTGTCAAATCTGGGTCGGATTCGAGCTACAAGACCGTCGAGGCGAAGCTCTGCTACGCGCCGGTGAGCCAAGTGGACCGGGCATGGAGAAAAACAGAGGACGATCTCTCAAAGGACAAGACCTGCCAGTTCCTCATTGTGGGAAAGCCGTACAATCCGGCGAACAAGACGGTACAAAAGTTTGAGTGGACGGTGGCGCGTGACATTCCAACGGGAACTTTCTTCGTCCGGGCCTACGCTTTCAATTCCGCCGGCGAGGAAGTGGGCTACGGGCAAACGACTGACAACAAAAAAGGCACAAACTTGTTTCAAATCGAATCGATCACAGGTCGCCATATCTCACTTGATATTGCCTCTGTTTGCTTCAGTGCTTTCTCTGTGCTGTCTTTGTCCGGATTCTTCTTGGCCGGAAAGAGAAAGGCCAAGAAGGCGGAGGCGCCGGGACAGTAAGTTAACAAAGATGGAAACTTGCTCTGTTTCTGAGTTCTTTTTTTTAAGTCTTTCTGCATTTTGGGTTTCTCTTGTACTGTAATTTTCTAGGTGAAAAGATGGAAAATAAAGTGTATTAAATTATGAATGTGTTGATTAATGACAATATTTGAATATATTGGACTTTGGGGTTTCATTCATTAGGGTAGATACATAGCTTGAATGGAACACAAAAGGTTGCAACACTCCAACCTTAGAACA

mRNA sequence

ATGAGTGTCATCGTCGTCGTCGTCCTCAAGTCTGCTGAAATATGGAGGGTTCAATCAATATTTCTCAAAGCGGGTGTTGATAAAATCAGTGTGACCTGGATTCTAAACGGGACTGTCAAATCTGGGTCGGATTCGAGCTACAAGACCGTCGAGGCGAAGCTCTGCTACGCGCCGGTGAGCCAAGTGGACCGGGCATGGAGAAAAACAGAGGACGATCTCTCAAAGGACAAGACCTGCCAGTTCCTCATTGTGGGAAAGCCGTACAATCCGGCGAACAAGACGGTACAAAAGTTTGAGTGGACGGTGGCGCGTGACATTCCAACGGGAACTTTCTTCGTCCGGGCCTACGCTTTCAATTCCGCCGGCGAGGAAGTGGGCTACGGGCAAACGACTGACAACAAAAAAGGCACAAACTTGTTTCAAATCGAATCGATCACAGGTCGCCATATCTCACTTGATATTGCCTCTGTTTGCTTCAGTGCTTTCTCTGTGCTGTCTTTGTCCGGATTCTTCTTGGCCGGAAAGAGAAAGGCCAAGAAGGCGGAGGCGCCGGGACAGTAAGTTAACAAAGATGGAAACTTGCTCTGTTTCTGAGTTCTTTTTTTTAAGTCTTTCTGCATTTTGGGTTTCTCTTGTACTGTAATTTTCTAGGTGAAAAGATGGAAAATAAAGTGTATTAAATTATGAATGTGTTGATTAATGACAATATTTGAATATATTGGACTTTGGGGTTTCATTCATTAGGGTAGATACATAGCTTGAATGGAACACAAAAGGTTGCAACACTCCAACCTTAGAACA

Coding sequence (CDS)

ATGAGTGTCATCGTCGTCGTCGTCCTCAAGTCTGCTGAAATATGGAGGGTTCAATCAATATTTCTCAAAGCGGGTGTTGATAAAATCAGTGTGACCTGGATTCTAAACGGGACTGTCAAATCTGGGTCGGATTCGAGCTACAAGACCGTCGAGGCGAAGCTCTGCTACGCGCCGGTGAGCCAAGTGGACCGGGCATGGAGAAAAACAGAGGACGATCTCTCAAAGGACAAGACCTGCCAGTTCCTCATTGTGGGAAAGCCGTACAATCCGGCGAACAAGACGGTACAAAAGTTTGAGTGGACGGTGGCGCGTGACATTCCAACGGGAACTTTCTTCGTCCGGGCCTACGCTTTCAATTCCGCCGGCGAGGAAGTGGGCTACGGGCAAACGACTGACAACAAAAAAGGCACAAACTTGTTTCAAATCGAATCGATCACAGGTCGCCATATCTCACTTGATATTGCCTCTGTTTGCTTCAGTGCTTTCTCTGTGCTGTCTTTGTCCGGATTCTTCTTGGCCGGAAAGAGAAAGGCCAAGAAGGCGGAGGCGCCGGGACAGTAA

Protein sequence

MSVIVVVVLKSAEIWRVQSIFLKAGVDKISVTWILNGTVKSGSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDKTCQFLIVGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGTNLFQIESITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAKKAEAPGQ
Homology
[Close]
BLAST of Cp4.1LG20g03470 vs. Swiss-Prot
Match: NRT31_ARATH (High-affinity nitrate transporter 3.1 OS=Arabidopsis thaliana GN=NRT3.1 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.8e-46
Identity = 90/160 (56.25%), Postives = 120/160 (75.00%), Query Frame = 1 

Query: 20  IFLKAGVDKISVTWILNGTVKSGSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDKTC 79
           + L AG D +++TW L+ ++ S  ++ +K ++ KLCYAP SQVDR WRKT D+L KDKTC
Sbjct: 50  VVLDAGKDTLNITWTLS-SIGSKREAEFKIIKVKLCYAPPSQVDRPWRKTHDELFKDKTC 109

Query: 80  QFLIVGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGTNL 139
              I+ KPY   +KT+Q   WT+ RDIPTGT+FVRAYA ++ G EV YGQ+TD+ K TNL
Sbjct: 110 PHKIIAKPY---DKTLQSTTWTLERDIPTGTYFVRAYAVDAIGHEVAYGQSTDDAKKTNL 169

Query: 140 FQIESITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAK 180
           F +++I+GRH SLDIAS+CFS FSV++L  FF+  KRKAK
Sbjct: 170 FSVQAISGRHASLDIASICFSVFSVVALVVFFVNEKRKAK 205

[Close]
BLAST of Cp4.1LG20g03470 vs. Swiss-Prot
Match: NRT32_ARATH (High-affinity nitrate transporter 3.2 OS=Arabidopsis thaliana GN=NRT3.2 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-42
Identity = 84/159 (52.83%), Postives = 114/159 (71.70%), Query Frame = 1 

Query: 22  LKAGVDKISVTWIL-NGTVKSGSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDKTCQ 81
           L+AG D +++TW L + + K  +D+++KT++ KLCYAP+SQVDR WRKT++ L KD++C 
Sbjct: 49  LEAGKDMVTITWKLKSSSAKVDTDTAFKTIQVKLCYAPISQVDRPWRKTDNKLFKDRSCP 108

Query: 82  FLIVGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGTNLF 141
             IV K Y+   KT Q  +WT+  DIPTGT+FVRAY  +  G EV YGQ+TD  + TNLF
Sbjct: 109 HEIVSKAYD---KTPQSLDWTIGLDIPTGTYFVRAYGIDGDGHEVAYGQSTDEGRTTNLF 168

Query: 142 QIESITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAK 180
            + +I+G H+ LDIAS  FS FSV+SL  FF+  KRKAK
Sbjct: 169 SVHAISGHHVGLDIASTFFSVFSVVSLFVFFVMEKRKAK 204

[Close]
BLAST of Cp4.1LG20g03470 vs. Swiss-Prot
Match: NAR21_ORYSJ (High-affinity nitrate transporter-activating protein 2.1 OS=Oryza sativa subsp. japonica GN=NAR2.1 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.9e-35
Identity = 73/157 (46.50%), Postives = 105/157 (66.88%), Query Frame = 1 

Query: 24  AGVDKISVTWILNGTVKSGSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDKTCQFLI 83
           AG + ++VTW LN +  +G+D+++K+V+ KLCYAP S+ DR WRK  DDL KDK CQF +
Sbjct: 57  AGENTVTVTWSLNTSEPAGADAAFKSVKVKLCYAPASRTDRGWRKASDDLHKDKACQFKV 116

Query: 84  VGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGTNLFQIE 143
             +PY        +F++ VARDIPT ++FVRAYA +++G EV YGQ++ +      F + 
Sbjct: 117 TVQPYAAG---AGRFDYVVARDIPTASYFVRAYAVDASGTEVAYGQSSPDA----AFDVA 176

Query: 144 SITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAKK 181
            ITG H SL +A+  FS FS+ +L+ FF+  KRK  K
Sbjct: 177 GITGIHASLKVAAGVFSTFSIAALAFFFVVEKRKKDK 206

[Close]
BLAST of Cp4.1LG20g03470 vs. Swiss-Prot
Match: NAR22_ORYSJ (Probable high-affinity nitrate transporter-activating protein 2.2 OS=Oryza sativa subsp. japonica GN=NAR2.2 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.2e-34
Identity = 77/162 (47.53%), Postives = 103/162 (63.58%), Query Frame = 1 

Query: 22  LKAGVDKISVTWILNGTVKS---GSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDKT 81
           L AG D I+VTW LN T  +   G+D+ YK V+  LCYAP SQV R WRK  DDLSKDK 
Sbjct: 57  LHAGEDAITVTWSLNATAAAAAAGADAGYKAVKVTLCYAPASQVGRGWRKAHDDLSKDKA 116

Query: 82  CQFLIVGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGTN 141
           CQF I  +PY+ A     KFE+TVARD+PT +++VRAYA +++G  V YG+T  +     
Sbjct: 117 CQFKIAQQPYDGAG----KFEYTVARDVPTASYYVRAYALDASGARVAYGETAPSAS--- 176

Query: 142 LFQIESITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAKK 181
            F +  ITG   S+++A+   SAFSV +L+ F +   +K  K
Sbjct: 177 -FAVAGITGVTASIEVAAGVLSAFSVAALAVFLVLENKKKNK 210

[Close]
BLAST of Cp4.1LG20g03470 vs. TrEMBL
Match: C8CHG8_CUCSA (High-affinity nitrate transport system component OS=Cucumis sativus GN=NAR2 PE=2 SV=2)

HSP 1 Score: 282.7 bits (722), Expect = 3.2e-73
Identity = 142/167 (85.03%), Postives = 147/167 (88.02%), Query Frame = 1 

Query: 22  LKAGVDKISVTWILNGTVKSGSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDKTCQF 81
           LKAGVDKISVTW+LN TVK+GSDSSYK ++AKLCYAPVSQVDRAWRKTEDDL KDKTCQF
Sbjct: 45  LKAGVDKISVTWVLNETVKAGSDSSYKNIKAKLCYAPVSQVDRAWRKTEDDLKKDKTCQF 104

Query: 82  LIVGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGTNLFQ 141
            IV K YNPANKTVQ FEWTV RDIPTGTFFVRAY  NSAGEEV YGQTTD KKGTNLFQ
Sbjct: 105 SIVEKQYNPANKTVQSFEWTVKRDIPTGTFFVRAYVLNSAGEEVAYGQTTDAKKGTNLFQ 164

Query: 142 IESITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAKK--AEAPGQ 187
           IESITGRHISLDIAS CFSAFSV+SL GFF   KRKAKK  A APGQ
Sbjct: 165 IESITGRHISLDIASACFSAFSVVSLFGFFFIDKRKAKKAAAAAPGQ 211

[Close]
BLAST of Cp4.1LG20g03470 vs. TrEMBL
Match: A0A068UWV6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00037308001 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 7.1e-57
Identity = 109/161 (67.70%), Postives = 131/161 (81.37%), Query Frame = 1 

Query: 22  LKAGVDKISVTWILNGTVKSGSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDKTCQF 81
           +K+G DKI+V+W  N T   G+DS+YKT++ KLCYAP+SQVDRAWRKT DDLSKDKTCQF
Sbjct: 104 VKSGEDKITVSWSYNNTFARGTDSTYKTIKVKLCYAPISQVDRAWRKTVDDLSKDKTCQF 163

Query: 82  LIVGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGTNLFQ 141
            IV KPYNP+N     F WTV RD PT T+FVRAYA+NSA EEVG+GQTTD+ K TNLF+
Sbjct: 164 NIVTKPYNPSNNNT--FTWTVERDTPTATYFVRAYAYNSAEEEVGFGQTTDSHKTTNLFE 223

Query: 142 IESITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAKKAE 183
           + +I+GRH SLDIAS+CFSAFSV+SL GFF   KRKAK ++
Sbjct: 224 VHAISGRHTSLDIASICFSAFSVVSLFGFFFIEKRKAKASQ 262

[Close]
BLAST of Cp4.1LG20g03470 vs. TrEMBL
Match: I1MUJ5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G124900 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 9.3e-57
Identity = 107/166 (64.46%), Postives = 133/166 (80.12%), Query Frame = 1 

Query: 18  QSIFLKAGVDKISVTWILNGTVKSGSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDK 77
           Q   L+AG+DKI+VTW LN T+ +G+DS+YKT++ KLCYAP+SQ DRAWRKTED+L +DK
Sbjct: 42  QEQVLEAGLDKITVTWALNKTLPAGTDSAYKTIKLKLCYAPISQKDRAWRKTEDELKRDK 101

Query: 78  TCQFLIVGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGT 137
           TCQ  IV KPY+ +NKTVQ+FEW V RD+P  T+FVRAYAF+S  EEV YGQTTD KK T
Sbjct: 102 TCQHKIVAKPYDASNKTVQRFEWLVERDVPKATYFVRAYAFDSNDEEVAYGQTTDAKKST 161

Query: 138 NLFQIESITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAKKAEA 184
           NLF+I +++GRH SLDI S+CFSAFSV+SL  FF   KRK K + +
Sbjct: 162 NLFEINAVSGRHASLDICSICFSAFSVVSLFVFFYIEKRKGKASSS 207

[Close]
BLAST of Cp4.1LG20g03470 vs. TrEMBL
Match: A0A0L9TQ82_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g230400 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.6e-56
Identity = 107/166 (64.46%), Postives = 132/166 (79.52%), Query Frame = 1 

Query: 18  QSIFLKAGVDKISVTWILNGTVKSGSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDK 77
           Q   L+AG DKI+VTW LN T+ SG+DS+YKT++ KLCYAP+SQ DRAWRKT D+LS+DK
Sbjct: 41  QGQVLEAGTDKITVTWALNKTLPSGTDSAYKTIKVKLCYAPISQKDRAWRKTVDELSRDK 100

Query: 78  TCQFLIVGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGT 137
           TCQ  IV KPY+ +N+TVQ+FEW + RD+P  T+FVRAY F+S GEEV YGQTTD KK +
Sbjct: 101 TCQHKIVAKPYDASNRTVQRFEWVIERDVPKATYFVRAYVFDSNGEEVAYGQTTDAKKSS 160

Query: 138 NLFQIESITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAKKAEA 184
           NLF+I SI+GRH SLDI SVCFSAFSV++L  FF   KRK K + +
Sbjct: 161 NLFEINSISGRHASLDICSVCFSAFSVVALFVFFYIEKRKGKASSS 206

[Close]
BLAST of Cp4.1LG20g03470 vs. TrEMBL
Match: A0A0S3R655_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G397600 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.6e-56
Identity = 107/166 (64.46%), Postives = 132/166 (79.52%), Query Frame = 1 

Query: 18  QSIFLKAGVDKISVTWILNGTVKSGSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDK 77
           Q   L+AG DKI+VTW LN T+ SG+DS+YKT++ KLCYAP+SQ DRAWRKT D+LS+DK
Sbjct: 41  QGQVLEAGTDKITVTWALNKTLPSGTDSAYKTIKVKLCYAPISQKDRAWRKTVDELSRDK 100

Query: 78  TCQFLIVGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGT 137
           TCQ  IV KPY+ +N+TVQ+FEW + RD+P  T+FVRAY F+S GEEV YGQTTD KK +
Sbjct: 101 TCQHKIVAKPYDASNRTVQRFEWVIERDVPKATYFVRAYVFDSNGEEVAYGQTTDAKKSS 160

Query: 138 NLFQIESITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAKKAEA 184
           NLF+I SI+GRH SLDI SVCFSAFSV++L  FF   KRK K + +
Sbjct: 161 NLFEINSISGRHASLDICSVCFSAFSVVALFVFFYIEKRKGKASSS 206

[Close]
BLAST of Cp4.1LG20g03470 vs. TAIR10
Match: AT5G50200.3 (AT5G50200.3 nitrate transmembrane transporters)

HSP 1 Score: 186.4 bits (472), Expect = 1.6e-47
Identity = 90/160 (56.25%), Postives = 120/160 (75.00%), Query Frame = 1 

Query: 20  IFLKAGVDKISVTWILNGTVKSGSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDKTC 79
           + L AG D +++TW L+ ++ S  ++ +K ++ KLCYAP SQVDR WRKT D+L KDKTC
Sbjct: 50  VVLDAGKDTLNITWTLS-SIGSKREAEFKIIKVKLCYAPPSQVDRPWRKTHDELFKDKTC 109

Query: 80  QFLIVGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGTNL 139
              I+ KPY   +KT+Q   WT+ RDIPTGT+FVRAYA ++ G EV YGQ+TD+ K TNL
Sbjct: 110 PHKIIAKPY---DKTLQSTTWTLERDIPTGTYFVRAYAVDAIGHEVAYGQSTDDAKKTNL 169

Query: 140 FQIESITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAK 180
           F +++I+GRH SLDIAS+CFS FSV++L  FF+  KRKAK
Sbjct: 170 FSVQAISGRHASLDIASICFSVFSVVALVVFFVNEKRKAK 205

[Close]
BLAST of Cp4.1LG20g03470 vs. TAIR10
Match: AT4G24730.1 (AT4G24730.1 Calcineurin-like metallo-phosphoesterase superfamily protein)

HSP 1 Score: 174.1 bits (440), Expect = 8.1e-44
Identity = 84/159 (52.83%), Postives = 114/159 (71.70%), Query Frame = 1 

Query: 22  LKAGVDKISVTWIL-NGTVKSGSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDKTCQ 81
           L+AG D +++TW L + + K  +D+++KT++ KLCYAP+SQVDR WRKT++ L KD++C 
Sbjct: 283 LEAGKDMVTITWKLKSSSAKVDTDTAFKTIQVKLCYAPISQVDRPWRKTDNKLFKDRSCP 342

Query: 82  FLIVGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGTNLF 141
             IV K Y+   KT Q  +WT+  DIPTGT+FVRAY  +  G EV YGQ+TD  + TNLF
Sbjct: 343 HEIVSKAYD---KTPQSLDWTIGLDIPTGTYFVRAYGIDGDGHEVAYGQSTDEGRTTNLF 402

Query: 142 QIESITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAK 180
            + +I+G H+ LDIAS  FS FSV+SL  FF+  KRKAK
Sbjct: 403 SVHAISGHHVGLDIASTFFSVFSVVSLFVFFVMEKRKAK 438

[Close]
BLAST of Cp4.1LG20g03470 vs. NCBI nr
Match: gi|659067354|ref|XP_008439011.1| (PREDICTED: high-affinity nitrate transporter 3.1-like [Cucumis melo])

HSP 1 Score: 286.2 bits (731), Expect = 4.1e-74
Identity = 138/165 (83.64%), Postives = 148/165 (89.70%), Query Frame = 1 

Query: 22  LKAGVDKISVTWILNGTVKSGSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDKTCQF 81
           LKAGVDKI VTW+LNGTVK+GSDSSYK ++AKLCYAPVSQVDRAWRKTEDDL KDKTCQF
Sbjct: 45  LKAGVDKIRVTWVLNGTVKAGSDSSYKNIKAKLCYAPVSQVDRAWRKTEDDLKKDKTCQF 104

Query: 82  LIVGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGTNLFQ 141
            IV KPYNPANKT Q FEWTV RD+PTGTFFVRAY FNSAG+EV YGQTTD+KKGTNLFQ
Sbjct: 105 DIVEKPYNPANKTAQSFEWTVERDVPTGTFFVRAYVFNSAGQEVAYGQTTDDKKGTNLFQ 164

Query: 142 IESITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAKKAEAPGQ 187
           IESITGRH+SLDIASVCFSAFSV+SL GFF   KRKAKKA A  +
Sbjct: 165 IESITGRHVSLDIASVCFSAFSVVSLFGFFFIDKRKAKKAAAAAE 209

[Close]
BLAST of Cp4.1LG20g03470 vs. NCBI nr
Match: gi|525507162|ref|NP_001267619.1| (high-affinity nitrate transporter 3.1-like precursor [Cucumis sativus])

HSP 1 Score: 282.7 bits (722), Expect = 4.6e-73
Identity = 142/167 (85.03%), Postives = 147/167 (88.02%), Query Frame = 1 

Query: 22  LKAGVDKISVTWILNGTVKSGSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDKTCQF 81
           LKAGVDKISVTW+LN TVK+GSDSSYK ++AKLCYAPVSQVDRAWRKTEDDL KDKTCQF
Sbjct: 45  LKAGVDKISVTWVLNETVKAGSDSSYKNIKAKLCYAPVSQVDRAWRKTEDDLKKDKTCQF 104

Query: 82  LIVGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGTNLFQ 141
            IV K YNPANKTVQ FEWTV RDIPTGTFFVRAY  NSAGEEV YGQTTD KKGTNLFQ
Sbjct: 105 SIVEKQYNPANKTVQSFEWTVKRDIPTGTFFVRAYVLNSAGEEVAYGQTTDAKKGTNLFQ 164

Query: 142 IESITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAKK--AEAPGQ 187
           IESITGRHISLDIAS CFSAFSV+SL GFF   KRKAKK  A APGQ
Sbjct: 165 IESITGRHISLDIASACFSAFSVVSLFGFFFIDKRKAKKAAAAAPGQ 211

[Close]
BLAST of Cp4.1LG20g03470 vs. NCBI nr
Match: gi|951070145|ref|XP_014490580.1| (PREDICTED: high-affinity nitrate transporter 3.1 [Vigna radiata var. radiata])

HSP 1 Score: 232.6 bits (592), Expect = 5.4e-58
Identity = 109/166 (65.66%), Postives = 135/166 (81.33%), Query Frame = 1 

Query: 18  QSIFLKAGVDKISVTWILNGTVKSGSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDK 77
           Q   L+AG DKI+VTW LN T+ +G+DS+YKT++ KLCYAP+SQ DRAWRKTED+LS+DK
Sbjct: 41  QGQVLEAGTDKITVTWALNNTLPTGTDSAYKTIKVKLCYAPISQKDRAWRKTEDELSRDK 100

Query: 78  TCQFLIVGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGT 137
           TCQ  IV KPY+ +N+TVQ+FEW + RD+P  T+FVRAYAF+S GEEV YGQTTD KK +
Sbjct: 101 TCQHKIVAKPYDASNRTVQRFEWVIERDVPKATYFVRAYAFDSNGEEVAYGQTTDAKKSS 160

Query: 138 NLFQIESITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAKKAEA 184
           NLF+I SI+GRH SLDI SVCFSAFSV++L  FF   KRKAK + +
Sbjct: 161 NLFEINSISGRHASLDICSVCFSAFSVVALFVFFYIEKRKAKASSS 206

[Close]
BLAST of Cp4.1LG20g03470 vs. NCBI nr
Match: gi|661883624|emb|CDP12709.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 228.4 bits (581), Expect = 1.0e-56
Identity = 109/161 (67.70%), Postives = 131/161 (81.37%), Query Frame = 1 

Query: 22  LKAGVDKISVTWILNGTVKSGSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDKTCQF 81
           +K+G DKI+V+W  N T   G+DS+YKT++ KLCYAP+SQVDRAWRKT DDLSKDKTCQF
Sbjct: 104 VKSGEDKITVSWSYNNTFARGTDSTYKTIKVKLCYAPISQVDRAWRKTVDDLSKDKTCQF 163

Query: 82  LIVGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGTNLFQ 141
            IV KPYNP+N     F WTV RD PT T+FVRAYA+NSA EEVG+GQTTD+ K TNLF+
Sbjct: 164 NIVTKPYNPSNNNT--FTWTVERDTPTATYFVRAYAYNSAEEEVGFGQTTDSHKTTNLFE 223

Query: 142 IESITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAKKAE 183
           + +I+GRH SLDIAS+CFSAFSV+SL GFF   KRKAK ++
Sbjct: 224 VHAISGRHTSLDIASICFSAFSVVSLFGFFFIEKRKAKASQ 262

[Close]
BLAST of Cp4.1LG20g03470 vs. NCBI nr
Match: gi|356563139|ref|XP_003549822.1| (PREDICTED: high-affinity nitrate transporter 3.1-like [Glycine max])

HSP 1 Score: 228.0 bits (580), Expect = 1.3e-56
Identity = 107/166 (64.46%), Postives = 133/166 (80.12%), Query Frame = 1 

Query: 18  QSIFLKAGVDKISVTWILNGTVKSGSDSSYKTVEAKLCYAPVSQVDRAWRKTEDDLSKDK 77
           Q   L+AG+DKI+VTW LN T+ +G+DS+YKT++ KLCYAP+SQ DRAWRKTED+L +DK
Sbjct: 42  QEQVLEAGLDKITVTWALNKTLPAGTDSAYKTIKLKLCYAPISQKDRAWRKTEDELKRDK 101

Query: 78  TCQFLIVGKPYNPANKTVQKFEWTVARDIPTGTFFVRAYAFNSAGEEVGYGQTTDNKKGT 137
           TCQ  IV KPY+ +NKTVQ+FEW V RD+P  T+FVRAYAF+S  EEV YGQTTD KK T
Sbjct: 102 TCQHKIVAKPYDASNKTVQRFEWLVERDVPKATYFVRAYAFDSNDEEVAYGQTTDAKKST 161

Query: 138 NLFQIESITGRHISLDIASVCFSAFSVLSLSGFFLAGKRKAKKAEA 184
           NLF+I +++GRH SLDI S+CFSAFSV+SL  FF   KRK K + +
Sbjct: 162 NLFEINAVSGRHASLDICSICFSAFSVVSLFVFFYIEKRKGKASSS 207

The following BLAST results are available for this feature:
BLAST of Cp4.1LG20g03470 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NRT31_ARATH2.8e-4656.25High-affinity nitrate transporter 3.1 OS=Arabidopsis thaliana GN=NRT3.1 PE=1 SV=... [more]
NRT32_ARATH1.4e-4252.83High-affinity nitrate transporter 3.2 OS=Arabidopsis thaliana GN=NRT3.2 PE=2 SV=... [more]
NAR21_ORYSJ4.9e-3546.50High-affinity nitrate transporter-activating protein 2.1 OS=Oryza sativa subsp. ... [more]
NAR22_ORYSJ4.2e-3447.53Probable high-affinity nitrate transporter-activating protein 2.2 OS=Oryza sativ... [more]
BLAST of Cp4.1LG20g03470 vs. TrEMBL
Match NameE-valueIdentityDescription
C8CHG8_CUCSA3.2e-7385.03High-affinity nitrate transport system component OS=Cucumis sativus GN=NAR2 PE=2... [more]
A0A068UWV6_COFCA7.1e-5767.70Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00037308001 PE=4 SV=1[more]
I1MUJ5_SOYBN9.3e-5764.46Uncharacterized protein OS=Glycine max GN=GLYMA_17G124900 PE=4 SV=1[more]
A0A0L9TQ82_PHAAN1.6e-5664.46Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g230400 PE=4 SV=1[more]
A0A0S3R655_PHAAN1.6e-5664.46Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G397600 PE=... [more]
BLAST of Cp4.1LG20g03470 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G50200.31.6e-4756.25 nitrate transmembrane transporters[more]
AT4G24730.18.1e-4452.83 Calcineurin-like metallo-phosphoesterase superfamily protein[more]
BLAST of Cp4.1LG20g03470 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659067354|ref|XP_008439011.1|4.1e-7483.64PREDICTED: high-affinity nitrate transporter 3.1-like [Cucumis melo][more]
gi|525507162|ref|NP_001267619.1|4.6e-7385.03high-affinity nitrate transporter 3.1-like precursor [Cucumis sativus][more]
gi|951070145|ref|XP_014490580.1|5.4e-5865.66PREDICTED: high-affinity nitrate transporter 3.1 [Vigna radiata var. radiata][more]
gi|661883624|emb|CDP12709.1|1.0e-5667.70unnamed protein product [Coffea canephora][more]
gi|356563139|ref|XP_003549822.1|1.3e-5664.46PREDICTED: high-affinity nitrate transporter 3.1-like [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015706nitrate transport
GO:0010167response to nitrate
Vocabulary: INTERPRO
TermDefinition
IPR016605Transptr_NO3_Nar2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015706 nitrate transport
biological_process GO:0010167 response to nitrate
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0015112 nitrate transmembrane transporter activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g03470.1Cp4.1LG20g03470.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016605High-affinity nitrate transporterPIRPIRSF012939NAR2coord: 3..182
score: 7.4
IPR016605High-affinity nitrate transporterPFAMPF16974NAR2coord: 21..178
score: 5.0
NoneNo IPR availablePANTHERPTHR34806FAMILY NOT NAMEDcoord: 18..184
score: 1.5
NoneNo IPR availablePANTHERPTHR34806:SF1HIGH-AFFINITY NITRATE TRANSPORTER 3.1-RELATEDcoord: 18..184
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG20g03470CmaCh13G007600Cucurbita maxima (Rimu)cmacpeB234
Cp4.1LG20g03470CmaCh18G001960Cucurbita maxima (Rimu)cmacpeB443
Cp4.1LG20g03470CmoCh13G007900Cucurbita moschata (Rifu)cmocpeB201
Cp4.1LG20g03470CmoCh18G001580Cucurbita moschata (Rifu)cmocpeB405
Cp4.1LG20g03470Cla005121Watermelon (97103) v1cpewmB509
Cp4.1LG20g03470Csa1G047430Cucumber (Chinese Long) v2cpecuB515
Cp4.1LG20g03470MELO3C002305Melon (DHL92) v3.5.1cpemeB470
Cp4.1LG20g03470ClCG03G003060Watermelon (Charleston Gray)cpewcgB469
Cp4.1LG20g03470CSPI01G08880Wild cucumber (PI 183967)cpecpiB517
Cp4.1LG20g03470Lsi02G004230Bottle gourd (USVL1VR-Ls)cpelsiB423
Cp4.1LG20g03470MELO3C002305.2Melon (DHL92) v3.6.1cpemedB552
Cp4.1LG20g03470CsaV3_1G008910Cucumber (Chinese Long) v3cpecucB0634
Cp4.1LG20g03470Bhi08G001354Wax gourdcpewgoB0656
Cp4.1LG20g03470CsGy1G008810Cucumber (Gy14) v2cgybcpeB080
Cp4.1LG20g03470Carg07560Silver-seed gourdcarcpeB1401
Cp4.1LG20g03470Carg06757Silver-seed gourdcarcpeB0698
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG20g03470Cp4.1LG09g10080Cucurbita pepo (Zucchini)cpecpeB045
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG20g03470Cucumber (Gy14) v1cgycpeB0040
Cp4.1LG20g03470Cucumber (Gy14) v1cgycpeB0159
Cp4.1LG20g03470Cucurbita maxima (Rimu)cmacpeB677
Cp4.1LG20g03470Cucurbita moschata (Rifu)cmocpeB631
Cp4.1LG20g03470Wild cucumber (PI 183967)cpecpiB527
Cp4.1LG20g03470Bottle gourd (USVL1VR-Ls)cpelsiB415
Cp4.1LG20g03470Watermelon (Charleston Gray)cpewcgB450
Cp4.1LG20g03470Watermelon (97103) v1cpewmB513
Cp4.1LG20g03470Melon (DHL92) v3.5.1cpemeB485
Cp4.1LG20g03470Melon (DHL92) v3.5.1cpemeB477