Cp4.1LG20g01760 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG20g01760
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRING/U-box superfamily protein
LocationCp4.1LG20 : 1001030 .. 1002169 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCGTCCGGCGGTAACTATGGCGACGGAGCTGGCGGTGGCGCCGCCTCGCATGGCCCTCAGCTCTTCTTCTGCTATACGTGCAATCGTACGGTAACCATTACTCCCTCATCATCCTCCGATCTTTTGTGCCCCAACTGCAACGATAGCTTCGTTGAAGAAATGGATAGTCCAAACCCTAACCCTAGCCCTGTTCCCAATCCTTTCCTCTCCTTCACATCCGAGGCATTTCCGCCGTTCAGCTCCGGTGGCGGTGGAAATGGCGGTGGAAATGGAGGTTTCCCGATTATATTCTCCACGACATCATCATCCGGTGGCATTGGCGGTGGCGGTTCTATGATGAATGATCTATCGGCGCTATTGGGAGGCGGTTCTCATCGGTCGACGTCCTTGCAAGACCCTGACGGTTTTAGTCCCTTGCTCTTCCTCCAGAACTATCTTCAAAGCGCTAATGTTCAATTGGTAATCCAGAACGCATCGGGAGAGGCGTTTCATCCCTCTTCCAATTTCAATCTTGGAGATTACTTCTTCGGCCCCGGCCTCGAGCAGTTGATTCAACAACTTGCTGAAAACGATCCGAACCGTTATGGAACCCCTCCCGCTTCAAAGTCGTCGATTGAGGCACTTCCAAATATCAAAATTACGGAGGAATTGTTGGCCTCAGATTCTTCCCAGTGCGCTGTTTGTAAGGATACGTTTGAGCTCAACGAGGAGGCGAAACAGATGCCTTGCAAACACATATATCACGCAGATTGTATCATTCCATGGCTGGAATTGCATAATTCTTGTCCGGTATGTCGATATGAATTGCCCACAGATGATCCCGATTACGAGCAAAGGAATCGTGGGACTTCAACTCCTAATCGAAGTCAAAGCGAAAGTCAACCCTTTGGTGATTCTTCTATCCGTGGGGAAAATGTTGGTGGAAGCGATCCTAATTCCGACGAGAATTCACCGAGTCAACAGGAGCGGAGGGTTAGGAGGATCGCATTTCCTTGGCCATTCAGAGGTTTTGGTTCGGCCGCTGAGACTAGTAACAGCGGAGGTGGCAACAATAGTGGAAATAGCGACGAACCTAGCTCCAGAAATAGGGGAAATCAGAGCTCTTCAGAACCCATGCAGGAAGATCTTGATTGA

mRNA sequence

ATGTCTTCGTCCGGCGGTAACTATGGCGACGGAGCTGGCGGTGGCGCCGCCTCGCATGGCCCTCAGCTCTTCTTCTGCTATACGTGCAATCGTACGGTAACCATTACTCCCTCATCATCCTCCGATCTTTTGTGCCCCAACTGCAACGATAGCTTCGTTGAAGAAATGGATAGTCCAAACCCTAACCCTAGCCCTGTTCCCAATCCTTTCCTCTCCTTCACATCCGAGGCATTTCCGCCGTTCAGCTCCGGTGGCGGTGGAAATGGCGGTGGAAATGGAGGTTTCCCGATTATATTCTCCACGACATCATCATCCGGTGGCATTGGCGGTGGCGGTTCTATGATGAATGATCTATCGGCGCTATTGGGAGGCGGTTCTCATCGGTCGACGTCCTTGCAAGACCCTGACGGTTTTAGTCCCTTGCTCTTCCTCCAGAACTATCTTCAAAGCGCTAATGTTCAATTGGTAATCCAGAACGCATCGGGAGAGGCGTTTCATCCCTCTTCCAATTTCAATCTTGGAGATTACTTCTTCGGCCCCGGCCTCGAGCAGTTGATTCAACAACTTGCTGAAAACGATCCGAACCGTTATGGAACCCCTCCCGCTTCAAAGTCGTCGATTGAGGCACTTCCAAATATCAAAATTACGGAGGAATTGTTGGCCTCAGATTCTTCCCAGTGCGCTGTTTGTAAGGATACGTTTGAGCTCAACGAGGAGGCGAAACAGATGCCTTGCAAACACATATATCACGCAGATTGTATCATTCCATGGCTGGAATTGCATAATTCTTGTCCGGTATGTCGATATGAATTGCCCACAGATGATCCCGATTACGAGCAAAGGAATCGTGGGACTTCAACTCCTAATCGAAGTCAAAGCGAAAGTCAACCCTTTGGTGATTCTTCTATCCGTGGGGAAAATGTTGGTGGAAGCGATCCTAATTCCGACGAGAATTCACCGAGTCAACAGGAGCGGAGGGTTAGGAGGATCGCATTTCCTTGGCCATTCAGAGGTTTTGGTTCGGCCGCTGAGACTAGTAACAGCGGAGGTGGCAACAATAGTGGAAATAGCGACGAACCTAGCTCCAGAAATAGGGGAAATCAGAGCTCTTCAGAACCCATGCAGGAAGATCTTGATTGA

Coding sequence (CDS)

ATGTCTTCGTCCGGCGGTAACTATGGCGACGGAGCTGGCGGTGGCGCCGCCTCGCATGGCCCTCAGCTCTTCTTCTGCTATACGTGCAATCGTACGGTAACCATTACTCCCTCATCATCCTCCGATCTTTTGTGCCCCAACTGCAACGATAGCTTCGTTGAAGAAATGGATAGTCCAAACCCTAACCCTAGCCCTGTTCCCAATCCTTTCCTCTCCTTCACATCCGAGGCATTTCCGCCGTTCAGCTCCGGTGGCGGTGGAAATGGCGGTGGAAATGGAGGTTTCCCGATTATATTCTCCACGACATCATCATCCGGTGGCATTGGCGGTGGCGGTTCTATGATGAATGATCTATCGGCGCTATTGGGAGGCGGTTCTCATCGGTCGACGTCCTTGCAAGACCCTGACGGTTTTAGTCCCTTGCTCTTCCTCCAGAACTATCTTCAAAGCGCTAATGTTCAATTGGTAATCCAGAACGCATCGGGAGAGGCGTTTCATCCCTCTTCCAATTTCAATCTTGGAGATTACTTCTTCGGCCCCGGCCTCGAGCAGTTGATTCAACAACTTGCTGAAAACGATCCGAACCGTTATGGAACCCCTCCCGCTTCAAAGTCGTCGATTGAGGCACTTCCAAATATCAAAATTACGGAGGAATTGTTGGCCTCAGATTCTTCCCAGTGCGCTGTTTGTAAGGATACGTTTGAGCTCAACGAGGAGGCGAAACAGATGCCTTGCAAACACATATATCACGCAGATTGTATCATTCCATGGCTGGAATTGCATAATTCTTGTCCGGTATGTCGATATGAATTGCCCACAGATGATCCCGATTACGAGCAAAGGAATCGTGGGACTTCAACTCCTAATCGAAGTCAAAGCGAAAGTCAACCCTTTGGTGATTCTTCTATCCGTGGGGAAAATGTTGGTGGAAGCGATCCTAATTCCGACGAGAATTCACCGAGTCAACAGGAGCGGAGGGTTAGGAGGATCGCATTTCCTTGGCCATTCAGAGGTTTTGGTTCGGCCGCTGAGACTAGTAACAGCGGAGGTGGCAACAATAGTGGAAATAGCGACGAACCTAGCTCCAGAAATAGGGGAAATCAGAGCTCTTCAGAACCCATGCAGGAAGATCTTGATTGA

Protein sequence

MSSSGGNYGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPNPNPSPVPNPFLSFTSEAFPPFSSGGGGNGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSHRSTSLQDPDGFSPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPNRSQSESQPFGDSSIRGENVGGSDPNSDENSPSQQERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNSDEPSSRNRGNQSSSEPMQEDLD
Homology
[Close]
BLAST of Cp4.1LG20g01760 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 2.8e-69
Identity = 166/368 (45.11%), Postives = 208/368 (56.52%), Query Frame = 1 

Query: 1   MSSSGGNYGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPN 60
           MSS   + G  A   AA    ++FFCY CN+TVTI+ SSS+D  CP CN  F+EE + PN
Sbjct: 1   MSSGVNSTGSAA---AAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPN 60

Query: 61  PNPSPVPNPFLSFTSEAFP---PFSSGGGGNGGGNGGFPIIFSTTSSSGGIGGGGSMMND 120
           PN S   NP  + +   FP   PFS+            P+IF    SS     G   M+ 
Sbjct: 61  PNQSLNFNP--NSSDSFFPMADPFSTL----------LPLIFG---SSAAAPSGMDFMSL 120

Query: 121 LSALLGGGSHRSTSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQNASGEAFHPSSNFN 180
               +   +  +      D F P  FLQN+LQ+      + + VI+N      HPS   N
Sbjct: 121 FGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIEN------HPSDPGN 180

Query: 181 -----LGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQC 240
                 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKS+I+ALP +K+T+++L S+ +QC
Sbjct: 181 RMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQC 240

Query: 241 AVCKDTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTST 300
           AVC D FE   + KQMPCKH++H DC++PWLELHNSCPVCR+ELPTDDPDYE R++G   
Sbjct: 241 AVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQG--- 300

Query: 301 PNRSQSESQPFGDSSIRGENVGGSDPNSDENSPSQQERRVRRIAFPWPFR---GFGSAAE 353
                S+    G  S+ G                QQ  R   I  PWPFR   G GS + 
Sbjct: 301 -----SQGSGDGQGSVEG----------------QQTPRF-SIQLPWPFRRQDGSGSGSG 319

[Close]
BLAST of Cp4.1LG20g01760 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 8.2e-69
Identity = 164/354 (46.33%), Postives = 199/354 (56.21%), Query Frame = 1 

Query: 3   SSGGNYGDGAGGGAASHGPQLFFCYTCNRTVTITPSS-SSDLLCPNCNDSFVEEMDSPNP 62
           SS GN   G G        + FFCY CNRTV +T S  SSD  CP CN+ F+EE D+PNP
Sbjct: 2   SSDGNVTGGGGANTVGVTNKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNP 61

Query: 63  N-------PSPVPNPFLSFTSEAFPPFSSGGGGNGGGNGGFPIIFSTTSSSGGIGGGGSM 122
           N       P+P   PF         PF+S            P++F ++SS+         
Sbjct: 62  NQGSGFLNPNPNSIPFHDLFLTLSDPFASL----------LPLLFPSSSSTTTSSSASID 121

Query: 123 MNDLSALLGGGSHRSTSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQN-ASGEAFHPS 182
            N+ S     G  RS    DP  F P  F+QN+L       A ++ VIQN  S + F   
Sbjct: 122 PNNPSL---SGPTRS-GRGDPFAFDPFTFIQNHLNDLRSSGAQIEFVIQNNPSDQGFRLP 181

Query: 183 SNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCA 242
           +N  +GDYF GPGLEQLIQQLAENDPNRYGTPPASKS+IEALP + IT+  L S+ +QCA
Sbjct: 182 AN--IGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCA 241

Query: 243 VCKDTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTP 302
           VC D FE   EAKQMPCKH+YH DC++PWLELHNSCPVCR+ELPTDDPDYE+R RG    
Sbjct: 242 VCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYERRVRGA--- 301

Query: 303 NRSQSESQPFGDSSIRGENVGGSDPNSDENSPSQQE--RRVRRIAFPWPFRGFG 341
                          +G + G    NS + S        R  RI+ PWPF+  G
Sbjct: 302 ---------------QGTSGGNDGDNSGQRSDGDNRTVERSFRISLPWPFQARG 321

[Close]
BLAST of Cp4.1LG20g01760 vs. Swiss-Prot
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.3e-39
Identity = 97/189 (51.32%), Postives = 111/189 (58.73%), Query Frame = 1 

Query: 172 NLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCK 231
           N GDYFFGPGLE+L +QL+     R G PPA +S+I+ALP IKI +  L S  S C VCK
Sbjct: 136 NTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCK 195

Query: 232 DTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPNRS 291
           D FEL  EAKQMPC HIYH+DCI+PWL  HNSCPVCR ELP+       +NR T T N  
Sbjct: 196 DEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYR 255

Query: 292 QSESQPFGDSSIRGENVGGSDPNSDENSPSQQERRVRRIAFPWPFRGFG-SAAETSNSGG 351
            S S               S  NS EN     ERR    +F WPFR  G S++ T N GG
Sbjct: 256 SSSS--------------SSSSNSRENG---NERRNPFSSF-WPFRSSGSSSSSTQNRGG 305

Query: 352 GNNSGNSDE 360
             NS  SDE
Sbjct: 316 TRNSDTSDE 305

[Close]
BLAST of Cp4.1LG20g01760 vs. Swiss-Prot
Match: RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.6e-27
Identity = 83/261 (31.80%), Postives = 135/261 (51.72%), Query Frame = 1 

Query: 24  FFCYTCNRTVTI--TPSSSSDLLCPNCNDSFVEEM-DSPNPNPSPVP--NPFLSFTSEAF 83
           ++CY+C R +++     +++ +LCP CN  F+EE+ DS N   + +P   P +    E  
Sbjct: 31  YWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPASTPEVRSVEETH 90

Query: 84  PPFSSGGGGNGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSHRSTSLQDPDGF 143
                    N   +   P+I         + GGG          GGG+      ++ DG 
Sbjct: 91  RSIIRRRRSNRRTSFN-PVIV--------LHGGG----------GGGAGERVENEEGDGA 150

Query: 144 SPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAE-----ND 203
           +         +    +    + SG    P  + ++ +   G G E+L++QL++     N 
Sbjct: 151 TR--------ERRAYEFYYDDGSGSGLRPLPD-SVSEILMGSGFERLLEQLSQIEASGNG 210

Query: 204 PNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDTFELNEEAKQMPCKHIYHADC 263
             R G PPASKS+IE+LP ++I++    ++++ CAVC + FE   E ++MPCKHI+H DC
Sbjct: 211 IGRSGNPPASKSAIESLPRVEISDCHTKAEAN-CAVCTEVFEAGIEGREMPCKHIFHGDC 262

Query: 264 IIPWLELHNSCPVCRYELPTD 275
           I+PWL + NSCPVCR+ELP+D
Sbjct: 271 IVPWLSIRNSCPVCRFELPSD 262

[Close]
BLAST of Cp4.1LG20g01760 vs. Swiss-Prot
Match: RHC2A_ARATH (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana GN=RHC2A PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 6.5e-26
Identity = 88/267 (32.96%), Postives = 130/267 (48.69%), Query Frame = 1 

Query: 24  FFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSP---NPNPSPVPNPFLSFTSEA-FP 83
           ++CY+C+R V ++ S S    CP+C+  F+E +  P    P+ S          S   FP
Sbjct: 6   YWCYSCSRFVWVSDSIS----CPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTRFP 65

Query: 84  PFSSGGGGNGGG----NGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSHRSTSLQDP 143
           P SS            N   P I + T S+          N +  L G  +  S+ +   
Sbjct: 66  PPSSSSSTPSASMHADNSPTPTIVTRTRSNRS-------PNPVIVLRGSAAAPSSDV--- 125

Query: 144 DGFSPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPN 203
                   +   L  +  Q+   + +     P    ++ ++  G G ++L+ Q+++ + N
Sbjct: 126 --------VSEGLDRSAFQMYYDDGTDSGLRPLPP-SMTEFLLGSGFDRLLDQISQIELN 185

Query: 204 RYGT------PPASKSSIEALPNIKITEELLASDS-SQCAVCKDTFELNEEAKQMPCKHI 263
                     PPASKS+IEALP I+I    L SDS S CAVCK+ F L   A++MPC HI
Sbjct: 186 TNRNLRSCEHPPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHI 245

Query: 264 YHADCIIPWLELHNSCPVCRYELPTDD 276
           YH DCI+PWL + NSCPVCR+ELP +D
Sbjct: 246 YHPDCILPWLAIRNSCPVCRHELPAED 249

[Close]
BLAST of Cp4.1LG20g01760 vs. TrEMBL
Match: A0A0A0LTV3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043100 PE=4 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 4.2e-189
Identity = 345/382 (90.31%), Postives = 359/382 (93.98%), Query Frame = 1 

Query: 1   MSSSGGNYGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPN 60
           MSSSGGN GDGAGGG ASH PQL+FCYTCNRTVTITPSSSSDLLCPNCNDSFVEEM+SPN
Sbjct: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSSGGGGNGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSA 120
           PNPSPV NPFLSFTSEAFPPFS+GGGGNGG    FPIIFSTTSSSGGIGGGGSMMNDLSA
Sbjct: 61  PNPSPVSNPFLSFTSEAFPPFSTGGGGNGG----FPIIFSTTSSSGGIGGGGSMMNDLSA 120

Query: 121 LLGGGSHRSTS-LQDPDGFSPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDYFFG 180
           LLGGGS RS+S LQ+PDGF+PLLFLQNYLQSANVQLVIQNASGEAFHP SNFNLGDYFFG
Sbjct: 121 LLGGGSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFG 180

Query: 181 PGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDTFELNEE 240
           PGLEQLIQQLAENDPNRYGTPPASKS+IE LP+IKITEELLA+DSSQCAVCKDTFEL+E 
Sbjct: 181 PGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEV 240

Query: 241 AKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPNRSQSESQPFG 300
           AK MPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQR RG+S PNRSQSESQPFG
Sbjct: 241 AKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFG 300

Query: 301 DSSIRGENVGGSDPNSDENSPSQQ--ERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNS 360
           DSS  GENV GSDPNSDENS +QQ  ERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGN+
Sbjct: 301 DSSTGGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNN 360

Query: 361 DEPSSRNRGNQSSSEPMQEDLD 380
           DEPSSRNRG+Q SSEPMQEDLD
Sbjct: 361 DEPSSRNRGSQGSSEPMQEDLD 378

[Close]
BLAST of Cp4.1LG20g01760 vs. TrEMBL
Match: W9T1E8_9ROSA (E3 ubiquitin-protein ligase RING1 OS=Morus notabilis GN=L484_000879 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 8.4e-113
Identity = 241/394 (61.17%), Postives = 284/394 (72.08%), Query Frame = 1 

Query: 1   MSSSGGNYGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPN 60
           MSSSGGN G   GGG     PQ +FC+ CNRTV+ITPS +SDL+CP C   F+EE+ +PN
Sbjct: 1   MSSSGGNSG---GGGIGISAPQPYFCHQCNRTVSITPSPTSDLVCPVCGGGFLEEVQNPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSSGGGGNGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSA 120
           P+P P PN F SF+S+           +  G  GFP++F+TTSSSG   GGG++++DL A
Sbjct: 61  PSPEPSPNSFFSFSSD----------DSSFGARGFPLLFTTTSSSGH--GGGALVDDLPA 120

Query: 121 LLGGGSHRSTSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQNASGE--AFHPSSNFNL 180
           L GG   R +  +D D F+P  FLQNYLQ+     ANVQ VI    G+   F   +N NL
Sbjct: 121 LFGGPLTRVSQSEDTDAFNPFAFLQNYLQTLRATGANVQFVIDGNPGDPAGFRVPTNLNL 180

Query: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDT 240
           GDYFFGPGLEQLIQQLAENDPNRYGTPPASKS++E LP++KITEELLASDSSQCAVCKDT
Sbjct: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAMEGLPSVKITEELLASDSSQCAVCKDT 240

Query: 241 FELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTP-NRSQ 300
           FEL EEAKQMPCKHIYH++CI+PWLELHNSCPVCRYELPTDDPDYEQRNRGTSTP N+SQ
Sbjct: 241 FELGEEAKQMPCKHIYHSECILPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPANQSQ 300

Query: 301 SE---SQPFGDSSIRGENVG-GSDPNSDEN--SPSQQERRVRRIAFPWPFRGFGSAAETS 360
           +    +   G  SI     G GS   S EN  +P   ERR   I+ P  FR FGS AETS
Sbjct: 301 AAGGFNISVGGGSINAVGDGSGSGATSGENPQTPRMVERRF-TISLPQLFRVFGSTAETS 360

Query: 361 NSGGGNNSGNSDEPSSRNRGNQSS-SEPMQEDLD 380
           N+G GNN+GN++  +S NRGNQS+ SEP  EDLD
Sbjct: 361 NTGSGNNNGNNEGSNSENRGNQSTGSEPRHEDLD 378

[Close]
BLAST of Cp4.1LG20g01760 vs. TrEMBL
Match: A0A068TRB9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022708001 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 6.7e-94
Identity = 217/404 (53.71%), Postives = 256/404 (63.37%), Query Frame = 1 

Query: 5   GGNYGDGAGGGAASHGPQLFFCYTCNRTVTITPSSS--SDLLCPNCNDSFVEEMDSPNPN 64
           GG    GAGGG A   PQ +FCY C RTVTI+PS S  S+L+CPNC+  F+EE +S +  
Sbjct: 8   GGGDRGGAGGGTA---PQNYFCYQCQRTVTISPSPSPTSELVCPNCHGGFLEESESADEP 67

Query: 65  PSPV---PNPFLSFTSEAFPPFSSGGGGNGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLS 124
           PSP    P+ F       FPP   GGGG GGG GGFP+IFS++S     GGGG +  DLS
Sbjct: 68  PSPPAVGPDLF-------FPPIFGGGGGGGGGGGGFPVIFSSSS-----GGGGEI--DLS 127

Query: 125 ALLGGGSHRSTSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQNASGEA---FHPSSNF 184
           AL GG +      Q P+ F+P  FL NYL +     AN+Q+V  N  G     F      
Sbjct: 128 ALFGGAA--GYPAQSPNEFNPFAFLNNYLNNLRAGGANIQVVFDNPGGGVGIGFGGGGGL 187

Query: 185 --NLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAV 244
             N GDYF GPGLEQLIQQLAENDPNRYGTPPASKS++E LP +K+TEELLA+DSSQCAV
Sbjct: 188 PGNFGDYFVGPGLEQLIQQLAENDPNRYGTPPASKSAVEGLPTVKMTEELLATDSSQCAV 247

Query: 245 CKDTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPN 304
           CKD+F L+EEAKQMPCKHIYH+DCI+PWLELHNSCPVCRYELPTDDPDYE R  G    N
Sbjct: 248 CKDSFLLDEEAKQMPCKHIYHSDCILPWLELHNSCPVCRYELPTDDPDYESRRNGQQGGN 307

Query: 305 RSQSESQPFGDSSIRGENV--------GGSDPNSDENSPSQQERRVRRIAFPWPFRGFGS 364
            S S  + FG +    +N+        GG+    +  +P   ERR  RI+ PW FRGFGS
Sbjct: 308 NSTSNVRSFGINIRTDDNLGTGSGGLSGGAVNQENPQTPRTVERRF-RISLPWLFRGFGS 367

Query: 365 AAETSNSGGGNNSGNSDEPSSRNRGN------QSSSEPMQEDLD 380
            AETS SGG  NS   +  S +N  N       S  +   EDLD
Sbjct: 368 PAETSGSGGAANSDGGNNGSRQNNNNSGGSNTDSGGQARMEDLD 391

[Close]
BLAST of Cp4.1LG20g01760 vs. TrEMBL
Match: A0A103Y8F4_CYNCS (Zinc finger, RING/FYVE/PHD-type OS=Cynara cardunculus var. scolymus GN=Ccrd_017249 PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.9e-93
Identity = 213/393 (54.20%), Postives = 261/393 (66.41%), Query Frame = 1 

Query: 1   MSSSGGNYGDGAGGGAASHG--PQLFFCYTCNRTVTITPSS--SSDLLCPNCNDSFVEEM 60
           MS    + GDG GGG  +HG  P+L+FCY CN TV+I PS   SS+L CP+C+  F+EE 
Sbjct: 1   MSQGVYSGGDGVGGGN-THGAPPKLYFCYQCNHTVSIRPSPTVSSELFCPDCSGGFLEEY 60

Query: 61  DSPNPNPSPVPNPFLSFTSEA-FPPFSSGGGGNGGGNGGFPIIFSTTS-SSGGIGGGGSM 120
           ++PNP+ S  PNPFL+F  ++ F PFS+G          FP++FSTTS  SG        
Sbjct: 61  ENPNPS-STTPNPFLAFDDDSPFTPFSTG----------FPLVFSTTSRGSGAASDDFQS 120

Query: 121 MNDLSALLGGGSHRSTSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQNASG---EAFH 180
             DLSAL GG   RS S Q+P  F+P  FLQNYL +     AN+Q VI+N S      FH
Sbjct: 121 PTDLSALFGGPLSRSGSFQNPGEFNPFAFLQNYLSTLRAGGANIQFVIENNSDGDPSGFH 180

Query: 181 PSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQ 240
             +N  LGDYF GPGLEQLIQQLAENDPNRYGTPPASKS +  LP+IKIT++LL SD S 
Sbjct: 181 LPAN--LGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSVVRNLPSIKITDDLLESDYSD 240

Query: 241 CAVCKDTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTS 300
           CAVCKD+FEL+EEAKQ+PCKH+YH DCIIPWLELHNSCPVCR+ELPTDDP+YE R+   S
Sbjct: 241 CAVCKDSFELHEEAKQLPCKHVYHQDCIIPWLELHNSCPVCRFELPTDDPEYENRSCEGS 300

Query: 301 TPNRSQSESQPFGDSSIRGENVGGSDPNSDENSPSQQERRVRRIAFPWPFRGFGSAAETS 360
               +    +  G +     +V G DP  +  +PS  ERR  RI+ PWPF GFG++AETS
Sbjct: 301 V---AAGGGRNMGAARSGAASVSG-DPQENPETPSNTERRF-RISLPWPFTGFGASAETS 360

Query: 361 NSGGGN-NSGNSDEPSSRNRGNQSSSEPMQEDL 379
           NSG GN NSG+S+        + S  +  QEDL
Sbjct: 361 NSGAGNSNSGHSN--------SGSGGQDRQEDL 366

[Close]
BLAST of Cp4.1LG20g01760 vs. TrEMBL
Match: A0A059AWT5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00641 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 4.3e-93
Identity = 217/405 (53.58%), Postives = 260/405 (64.20%), Query Frame = 1 

Query: 1   MSSSGGNYGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPN 60
           M+SSGG  G GAG G    GPQL++C+ C  TV+I  S ++DL+CP+CN  F+EE +SP+
Sbjct: 1   MASSGGRTGAGAGFGG---GPQLYYCHQCRSTVSINRSPTADLVCPDCNGEFLEESESPD 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSSGGGGNGGGNG-------GFPIIFSTTSSSGGIGGGGS 120
              SP+  PF  F  E F    S G G+G G G       G P +F+++S++GG  GGG+
Sbjct: 61  V--SPMLPPFFPF--ENFGSGGSAGSGSGSGGGMSFSSGAGLPWVFTSSSTAGGAAGGGA 120

Query: 121 M-MNDLSALLGGGS---HRSTSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQNA---- 180
             M+D SAL GG S       +  +PD F+PLLFL NY Q+     AN+Q VI N     
Sbjct: 121 GGMDDFSALFGGASAFGEGGGNSNNPDAFNPLLFLNNYFQTLRAGGANIQFVIDNNTGGD 180

Query: 181 SGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELL 240
           SG +F    N NLGDYF G  LEQLIQQLAENDPNRYGTPPASK++I  LP +KI EE L
Sbjct: 181 SGGSFRFPGNINLGDYFIGSNLEQLIQQLAENDPNRYGTPPASKTAINGLPVVKIDEESL 240

Query: 241 ASDSSQCAVCKDTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQ 300
           ASD+SQCAVCKDTFEL EEAKQMPCKHIYH+DCI+PWLELHNSCPVCR+ELPTDDPDYEQ
Sbjct: 241 ASDNSQCAVCKDTFELGEEAKQMPCKHIYHSDCILPWLELHNSCPVCRHELPTDDPDYEQ 300

Query: 301 RNRGTSTPNRSQSESQPFGDSSIRGENVGGSDPNSDENSPSQQERRVR-RIAFPWPF-RG 360
           RNRG          +Q    S + G    G        +P   ERR R  +  PWPF R 
Sbjct: 301 RNRGPQAQQVLGGRTQTDVSSDLSGAPASG----DSSQTPQTMERRFRISLPLPWPFNRT 360

Query: 361 FGSAAETSN--SGGGNNSGNSDEPSSRNRG--NQSSSEPMQEDLD 380
           FGS AETS+  SG GNN+GN+D  S+   G      SE  QEDLD
Sbjct: 361 FGSPAETSDSGSGSGNNNGNNDGNSNTGGGANRNFESETRQEDLD 394

[Close]
BLAST of Cp4.1LG20g01760 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-70
Identity = 166/368 (45.11%), Postives = 208/368 (56.52%), Query Frame = 1 

Query: 1   MSSSGGNYGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPN 60
           MSS   + G  A   AA    ++FFCY CN+TVTI+ SSS+D  CP CN  F+EE + PN
Sbjct: 1   MSSGVNSTGSAA---AAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPN 60

Query: 61  PNPSPVPNPFLSFTSEAFP---PFSSGGGGNGGGNGGFPIIFSTTSSSGGIGGGGSMMND 120
           PN S   NP  + +   FP   PFS+            P+IF    SS     G   M+ 
Sbjct: 61  PNQSLNFNP--NSSDSFFPMADPFSTL----------LPLIFG---SSAAAPSGMDFMSL 120

Query: 121 LSALLGGGSHRSTSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQNASGEAFHPSSNFN 180
               +   +  +      D F P  FLQN+LQ+      + + VI+N      HPS   N
Sbjct: 121 FGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIEN------HPSDPGN 180

Query: 181 -----LGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQC 240
                 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKS+I+ALP +K+T+++L S+ +QC
Sbjct: 181 RMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQC 240

Query: 241 AVCKDTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTST 300
           AVC D FE   + KQMPCKH++H DC++PWLELHNSCPVCR+ELPTDDPDYE R++G   
Sbjct: 241 AVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQG--- 300

Query: 301 PNRSQSESQPFGDSSIRGENVGGSDPNSDENSPSQQERRVRRIAFPWPFR---GFGSAAE 353
                S+    G  S+ G                QQ  R   I  PWPFR   G GS + 
Sbjct: 301 -----SQGSGDGQGSVEG----------------QQTPRF-SIQLPWPFRRQDGSGSGSG 319

[Close]
BLAST of Cp4.1LG20g01760 vs. TAIR10
Match: AT5G56340.1 (AT5G56340.1 RING/U-box superfamily protein)

HSP 1 Score: 170.6 bits (431), Expect = 1.8e-42
Identity = 95/208 (45.67%), Postives = 131/208 (62.98%), Query Frame = 1 

Query: 152 NVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALP 211
           N  LV+ +   +  HPS   +LGDYF GPGL+ L+Q LAENDPNR GTPPA K ++EALP
Sbjct: 192 NQSLVVPSDQNQN-HPSLT-SLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALP 251

Query: 212 NIKITEELLASDSSQCAVCKDTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYEL 271
            +KI E L      QC+VC D FE   EAK+MPCKH +H  CI+PWLELH+SCPVCR+EL
Sbjct: 252 TVKIMEPL------QCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFEL 311

Query: 272 PTDDPDYEQRNRGTSTPNRSQSESQPFGDSSIRGENVGGSDPNSDENSPSQQERRVRRIA 331
           P+   D ++    +    R+++  +    + +  ENVG +D   ++   S      RR +
Sbjct: 312 PSSADDDDETKTDSERVLRTRNVRETSNGNVV--ENVGNADRGREDEVRSGNG---RRFS 371

Query: 332 FPWPFRG-FGSAAETSNSGGGNNSGNSD 359
           FPWPF G F S++ +S+S  G+ SG ++
Sbjct: 372 FPWPFSGLFSSSSSSSSSTSGSQSGENN 386

[Close]
BLAST of Cp4.1LG20g01760 vs. TAIR10
Match: AT1G55530.1 (AT1G55530.1 RING/U-box superfamily protein)

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-41
Identity = 86/207 (41.55%), Postives = 122/207 (58.94%), Query Frame = 1 

Query: 148 LQSANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSI 207
           + ++N  + +QN++     P+ +  LGDYF GPG E L+Q+LAENDPNRYGTPPA K ++
Sbjct: 152 INTSNQTITVQNSADMDSVPAGS--LGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAV 211

Query: 208 EALPNIKITEELLASDSSQCAVCKDTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVC 267
           EAL  +KI E L      QC+VC D FE+  EAK MPC H +H+DC++PWLELH+SCPVC
Sbjct: 212 EALATVKIEETL------QCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVC 271

Query: 268 RYELPTDDPDYEQRNRGTSTPNRSQSESQPFGDSSIRGENVGGSDPNSDENSPSQQERRV 327
           RY+LP D    E +    +T + +   S     +S   EN  G+    +E    ++E   
Sbjct: 272 RYQLPAD----EAKTDSVTTTSDNNGSSSASATTSHGAENSDGNRRQEEEEEEEEEEEEE 331

Query: 328 RR------IAFPWPFRGFGSAAETSNS 349
                    + PWPF    S+++ SN+
Sbjct: 332 NENNDGSGFSIPWPFSTLFSSSQDSNA 346

[Close]
BLAST of Cp4.1LG20g01760 vs. TAIR10
Match: AT2G40830.2 (AT2G40830.2 RING-H2 finger C1A)

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-40
Identity = 97/189 (51.32%), Postives = 111/189 (58.73%), Query Frame = 1 

Query: 172 NLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCK 231
           N GDYFFGPGLE+L +QL+     R G PPA +S+I+ALP IKI +  L S  S C VCK
Sbjct: 136 NTGDYFFGPGLEELFEQLSAGTTRR-GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCK 195

Query: 232 DTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPNRS 291
           D FEL  EAKQMPC HIYH+DCI+PWL  HNSCPVCR ELP+       +NR T T N  
Sbjct: 196 DEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGPSSSQNRTTPTRNYR 255

Query: 292 QSESQPFGDSSIRGENVGGSDPNSDENSPSQQERRVRRIAFPWPFRGFG-SAAETSNSGG 351
            S S               S  NS EN     ERR    +F WPFR  G S++ T N GG
Sbjct: 256 SSSS--------------SSSSNSRENG---NERRNPFSSF-WPFRSSGSSSSSTQNRGG 305

Query: 352 GNNSGNSDE 360
             NS  SDE
Sbjct: 316 TRNSDTSDE 305

[Close]
BLAST of Cp4.1LG20g01760 vs. TAIR10
Match: AT3G56580.2 (AT3G56580.2 RING/U-box superfamily protein)

HSP 1 Score: 142.9 bits (359), Expect = 4.1e-34
Identity = 124/353 (35.13%), Postives = 159/353 (45.04%), Query Frame = 1 

Query: 25  FCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMD-SPNPNPSPVPNPFLSFTSEAFPPFSS 84
           +C+ C R V +    + D +C  C   FVEE+D  P+     V         EAF  F  
Sbjct: 9   WCHRCQRAVWLR---ARDAVCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFMR 68

Query: 85  GGGGNGGGNGGFPIIFSTTSSSGGIGGGGS-MMNDLSALLGGGSHRSTSLQDPDGFSPLL 144
                   +            SG +G  GS   ++L+ LL  G      L   D  S   
Sbjct: 69  SRLAERSYD---------REISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEA 128

Query: 145 FLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPA 204
           F+              N +      +   N GDYFFGPGLE+LI+QL+    +R G PPA
Sbjct: 129 FV--------------NGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHR-GPPPA 188

Query: 205 SKSSIEALPNIKITEELLASDSSQCAVCKDTFELNEEAKQMPCKHIYHADCIIPWLELHN 264
            KSSI+ALP IKIT++ L S  S C VCKD FEL  EAKQMPC HIYH+DCI+PWL  HN
Sbjct: 189 PKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHN 248

Query: 265 SCPVCRYELPTDDPDYEQRNRGTSTPNRSQSESQPFGDSSIRGENVGGSDPNSDENSPSQ 324
           SCPVCR ELP         +RG+S+  +S                      N  ENS   
Sbjct: 249 SCPVCRKELP---------SRGSSSSTQSSQ----------------NRSTNGRENS--- 303

Query: 325 QERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNSDEPSSRNRGNQSSSEPMQ 376
             RR    +  WPFR   S++ T N    NN+  ++E    +   Q      Q
Sbjct: 309 --RRRNIFSNLWPFRS-SSSSSTQNRRDTNNTATAEEGHYHHHQQQQQQHQHQ 303

[Close]
BLAST of Cp4.1LG20g01760 vs. NCBI nr
Match: gi|659066950|ref|XP_008467256.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 672.5 bits (1734), Expect = 4.2e-190
Identity = 345/381 (90.55%), Postives = 360/381 (94.49%), Query Frame = 1 

Query: 1   MSSSGGNYGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPN 60
           MSSSGGN GDGAGGGA S+ PQL+FCYTCNRTVTITPSSSSDLLCPNCNDSFVEEM+SPN
Sbjct: 1   MSSSGGNSGDGAGGGAVSYPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSSGGGGNGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSA 120
           PNPSPVPNPFLSFTSEAFPPFS+GG    GGNGGFPIIFSTTSSSGGIGGGGSMMNDLSA
Sbjct: 61  PNPSPVPNPFLSFTSEAFPPFSTGG----GGNGGFPIIFSTTSSSGGIGGGGSMMNDLSA 120

Query: 121 LLGGGSHRSTSLQDPDGFSPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDYFFGP 180
           LLGGGS RS+SLQ+PDGF+PLLFLQNYLQSANVQLVIQNASGEAFHP SNFNLGDYFFGP
Sbjct: 121 LLGGGSLRSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGP 180

Query: 181 GLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDTFELNEEA 240
           GLEQLIQQLAENDPNRYGTPPASKS+IE LP+IKITEELLA+DSSQCAVCKDTFEL+E A
Sbjct: 181 GLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVA 240

Query: 241 KQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPNRSQSESQPFGD 300
           K MPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQR R +S PNRSQSESQPFGD
Sbjct: 241 KLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRASSAPNRSQSESQPFGD 300

Query: 301 SSIRGENVGGSDPNSDENSPSQQ--ERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNSD 360
           SS  GENV GSDPNSDENS +QQ  ERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGN+D
Sbjct: 301 SSTGGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNND 360

Query: 361 EPSSRNRGNQSSSEPMQEDLD 380
           EPSSRNRG+QSSSEPMQEDLD
Sbjct: 361 EPSSRNRGSQSSSEPMQEDLD 377

[Close]
BLAST of Cp4.1LG20g01760 vs. NCBI nr
Match: gi|449439501|ref|XP_004137524.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus])

HSP 1 Score: 668.7 bits (1724), Expect = 6.0e-189
Identity = 345/382 (90.31%), Postives = 359/382 (93.98%), Query Frame = 1 

Query: 1   MSSSGGNYGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPN 60
           MSSSGGN GDGAGGG ASH PQL+FCYTCNRTVTITPSSSSDLLCPNCNDSFVEEM+SPN
Sbjct: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSSGGGGNGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSA 120
           PNPSPV NPFLSFTSEAFPPFS+GGGGNGG    FPIIFSTTSSSGGIGGGGSMMNDLSA
Sbjct: 61  PNPSPVSNPFLSFTSEAFPPFSTGGGGNGG----FPIIFSTTSSSGGIGGGGSMMNDLSA 120

Query: 121 LLGGGSHRSTS-LQDPDGFSPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDYFFG 180
           LLGGGS RS+S LQ+PDGF+PLLFLQNYLQSANVQLVIQNASGEAFHP SNFNLGDYFFG
Sbjct: 121 LLGGGSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFG 180

Query: 181 PGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDTFELNEE 240
           PGLEQLIQQLAENDPNRYGTPPASKS+IE LP+IKITEELLA+DSSQCAVCKDTFEL+E 
Sbjct: 181 PGLEQLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEV 240

Query: 241 AKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPNRSQSESQPFG 300
           AK MPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQR RG+S PNRSQSESQPFG
Sbjct: 241 AKLMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFG 300

Query: 301 DSSIRGENVGGSDPNSDENSPSQQ--ERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNS 360
           DSS  GENV GSDPNSDENS +QQ  ERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGN+
Sbjct: 301 DSSTGGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNN 360

Query: 361 DEPSSRNRGNQSSSEPMQEDLD 380
           DEPSSRNRG+Q SSEPMQEDLD
Sbjct: 361 DEPSSRNRGSQGSSEPMQEDLD 378

[Close]
BLAST of Cp4.1LG20g01760 vs. NCBI nr
Match: gi|703069031|ref|XP_010088395.1| (E3 ubiquitin-protein ligase RING1 [Morus notabilis])

HSP 1 Score: 415.2 bits (1066), Expect = 1.2e-112
Identity = 241/394 (61.17%), Postives = 284/394 (72.08%), Query Frame = 1 

Query: 1   MSSSGGNYGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPN 60
           MSSSGGN G   GGG     PQ +FC+ CNRTV+ITPS +SDL+CP C   F+EE+ +PN
Sbjct: 1   MSSSGGNSG---GGGIGISAPQPYFCHQCNRTVSITPSPTSDLVCPVCGGGFLEEVQNPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSSGGGGNGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSA 120
           P+P P PN F SF+S+           +  G  GFP++F+TTSSSG   GGG++++DL A
Sbjct: 61  PSPEPSPNSFFSFSSD----------DSSFGARGFPLLFTTTSSSGH--GGGALVDDLPA 120

Query: 121 LLGGGSHRSTSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQNASGE--AFHPSSNFNL 180
           L GG   R +  +D D F+P  FLQNYLQ+     ANVQ VI    G+   F   +N NL
Sbjct: 121 LFGGPLTRVSQSEDTDAFNPFAFLQNYLQTLRATGANVQFVIDGNPGDPAGFRVPTNLNL 180

Query: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDT 240
           GDYFFGPGLEQLIQQLAENDPNRYGTPPASKS++E LP++KITEELLASDSSQCAVCKDT
Sbjct: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAMEGLPSVKITEELLASDSSQCAVCKDT 240

Query: 241 FELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTP-NRSQ 300
           FEL EEAKQMPCKHIYH++CI+PWLELHNSCPVCRYELPTDDPDYEQRNRGTSTP N+SQ
Sbjct: 241 FELGEEAKQMPCKHIYHSECILPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPANQSQ 300

Query: 301 SE---SQPFGDSSIRGENVG-GSDPNSDEN--SPSQQERRVRRIAFPWPFRGFGSAAETS 360
           +    +   G  SI     G GS   S EN  +P   ERR   I+ P  FR FGS AETS
Sbjct: 301 AAGGFNISVGGGSINAVGDGSGSGATSGENPQTPRMVERRF-TISLPQLFRVFGSTAETS 360

Query: 361 NSGGGNNSGNSDEPSSRNRGNQSS-SEPMQEDLD 380
           N+G GNN+GN++  +S NRGNQS+ SEP  EDLD
Sbjct: 361 NTGSGNNNGNNEGSNSENRGNQSTGSEPRHEDLD 378

[Close]
BLAST of Cp4.1LG20g01760 vs. NCBI nr
Match: gi|1009133460|ref|XP_015883912.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba])

HSP 1 Score: 387.5 bits (994), Expect = 2.7e-104
Identity = 234/394 (59.39%), Postives = 278/394 (70.56%), Query Frame = 1 

Query: 1   MSSSGGNYGD-GAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSP 60
           MSSSGG+ G  G  G A +  PQL+FC+ C+RTVT+TPS ++DLLCP CN  FVEE+ +P
Sbjct: 1   MSSSGGSLGGAGVAGTAGAGSPQLYFCHVCDRTVTLTPSPTTDLLCPVCNGGFVEELGTP 60

Query: 61  NPNPSPVPNPFLSFTSEAFPPFSSGGGGNGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLS 120
              P+P PN FL F+ E+ P           G  GFP +FST +SSG   G  ++++DLS
Sbjct: 61  ---PNPNPNTFLPFSHES-PSL---------GAAGFPFLFSTAASSGPTSGPATVVDDLS 120

Query: 121 ALLGGGSHRSTSL--QDPDGFSPLLFLQNYLQS-----ANVQLVIQNA-SGE--AFHPSS 180
           AL G G  R+  L  QDPD F+P LFLQNYLQ+     ANVQ VI +  SG+   F   S
Sbjct: 121 ALFGAGPTRNQHLTFQDPDAFNPFLFLQNYLQTLRANGANVQFVIDSGGSGDPAGFRVPS 180

Query: 181 NFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAV 240
           N NLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKS+I+ LP +KI+EELLASDSSQCAV
Sbjct: 181 NLNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIQGLPVVKISEELLASDSSQCAV 240

Query: 241 CKDTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNR-GTSTP 300
           CKDTFEL EEAKQMPCKHIYH+DCI+PWLELHNSCPVCRYELPTDDPDYEQR R G+   
Sbjct: 241 CKDTFELGEEAKQMPCKHIYHSDCIVPWLELHNSCPVCRYELPTDDPDYEQRTREGSGVG 300

Query: 301 NRSQSESQPFGDSSIRGENVGGSDPN--SDENSPSQQERRVRRIAFPWPFRGFGSAAETS 360
           N+S++     G ++  G N GG+     S EN P+    R  R++ P  FR FGS AETS
Sbjct: 301 NQSRTGG---GFNASSGGNDGGTGTGAASGENPPTP---RSFRVSLPRLFRVFGSPAETS 360

Query: 361 NSGGGNNSGNSDEPSSRNRGNQSSS-EPMQEDLD 380
           NSG GNN G +   ++ NRGN +S  EP QEDLD
Sbjct: 361 NSGSGNNDGAT---NTGNRGNPNSGPEPRQEDLD 372

[Close]
BLAST of Cp4.1LG20g01760 vs. NCBI nr
Match: gi|658022966|ref|XP_008346897.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Malus domestica])

HSP 1 Score: 386.0 bits (990), Expect = 7.8e-104
Identity = 227/401 (56.61%), Postives = 273/401 (68.08%), Query Frame = 1 

Query: 1   MSSSGGNYGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPN 60
           MSSSGG+ G   GG  A   PQL+FC+ C+RTV++TPS +SDL+CP C+  F+EEM++PN
Sbjct: 1   MSSSGGHSGS-VGGPIA---PQLYFCHECDRTVSLTPSPTSDLVCPLCSGGFLEEMETPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSSGGGGNGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSA 120
           P+P P PNPF SF S   PPF+S G         FP++FS+ S+ G   G  ++ +DLSA
Sbjct: 61  PSPFP-PNPFFSFPSSDAPPFASSG---------FPLLFSS-SAPGPAPGPANIADDLSA 120

Query: 121 LLGGGSHRSTSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQNASGEAFHPS-----SN 180
           L GG   RS+   DPD F+P +FLQNYLQ+     ANVQ VI +  G    PS     +N
Sbjct: 121 LFGGAPQRSSPFHDPDAFNPFVFLQNYLQTLRANGANVQFVIDSTPGGGGDPSGFRAPTN 180

Query: 181 FNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVC 240
            NLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKS+IEAL  +KI+EELLASDSSQCAVC
Sbjct: 181 LNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALLVVKISEELLASDSSQCAVC 240

Query: 241 KDTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPNR 300
           KD+FEL EEAKQMPCKHIYH+DCI+PWLELHN+CPVCR+ELPTDD +YEQR RG S    
Sbjct: 241 KDSFELGEEAKQMPCKHIYHSDCILPWLELHNTCPVCRHELPTDDSEYEQRIRGESGNGN 300

Query: 301 SQSESQPFGDSSIR----------GENVGGSDPNSDENSPSQQERRVRRIAFPWPFRGFG 360
             S+S   G ++I           G  +G   P++   SP   ERR   I+ P  FR  G
Sbjct: 301 QTSQSGALGGANISVGGGGSSSGFGFGIGAPSPDNQSPSPRTVERRF-TISLPRFFRQLG 360

Query: 361 SAAETSNSGGGNNSGNSDEPSSRNRG--NQSSSEPMQEDLD 380
             AETSN+G GNN    +E +S NRG  N  S EP QEDLD
Sbjct: 361 GTAETSNTGSGNN----EESNSGNRGRHNSGSEEPRQEDLD 381

The following BLAST results are available for this feature:
BLAST of Cp4.1LG20g01760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RNG1L_ARATH2.8e-6945.11E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
RING1_GOSHI8.2e-6946.33E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1[more]
RHC1A_ARATH2.3e-3951.32Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2... [more]
RDUF1_ARATH1.6e-2731.80E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1[more]
RHC2A_ARATH6.5e-2632.96Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana GN=RHC2A PE=2... [more]
BLAST of Cp4.1LG20g01760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTV3_CUCSA4.2e-18990.31Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043100 PE=4 SV=1[more]
W9T1E8_9ROSA8.4e-11361.17E3 ubiquitin-protein ligase RING1 OS=Morus notabilis GN=L484_000879 PE=4 SV=1[more]
A0A068TRB9_COFCA6.7e-9453.71Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022708001 PE=4 SV=1[more]
A0A103Y8F4_CYNCS1.9e-9354.20Zinc finger, RING/FYVE/PHD-type OS=Cynara cardunculus var. scolymus GN=Ccrd_0172... [more]
A0A059AWT5_EUCGR4.3e-9353.58Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00641 PE=4 SV=1[more]
BLAST of Cp4.1LG20g01760 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19950.11.6e-7045.11 RING/U-box superfamily protein[more]
AT5G56340.11.8e-4245.67 RING/U-box superfamily protein[more]
AT1G55530.11.2e-4141.55 RING/U-box superfamily protein[more]
AT2G40830.21.3e-4051.32 RING-H2 finger C1A[more]
AT3G56580.24.1e-3435.13 RING/U-box superfamily protein[more]
BLAST of Cp4.1LG20g01760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659066950|ref|XP_008467256.1|4.2e-19090.55PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo][more]
gi|449439501|ref|XP_004137524.1|6.0e-18990.31PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus][more]
gi|703069031|ref|XP_010088395.1|1.2e-11261.17E3 ubiquitin-protein ligase RING1 [Morus notabilis][more]
gi|1009133460|ref|XP_015883912.1|2.7e-10459.39PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba][more]
gi|658022966|ref|XP_008346897.1|7.8e-10456.61PREDICTED: E3 ubiquitin-protein ligase RING1-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0019083viral transcription
Vocabulary: Molecular Function
TermDefinition
GO:0003968RNA-directed RNA polymerase activity
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR004259Phosphoprotein
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0019083 viral transcription
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
cellular_component GO:0031379 RNA-directed RNA polymerase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003968 RNA-directed RNA polymerase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG20g01760.1Cp4.1LG20g01760.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 226..268
score: 1.9
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 227..267
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 227..268
score: 12
IPR004259PhosphoproteinPRODOMPD004155coord: 116..206
score: 0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 223..271
score: 2.1
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 16..81
score: 1.5E-109coord: 101..378
score: 1.5E
NoneNo IPR availablePANTHERPTHR22763:SF5E3 UBIQUITIN-PROTEIN LIGASE CIP8coord: 16..81
score: 1.5E-109coord: 101..378
score: 1.5E
NoneNo IPR availablePFAMPF14369zinc_ribbon_9coord: 23..56
score: 1.3
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 208..276
score: 1.53