CmoCh13G009990 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh13G009990
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionRING/U-box superfamily protein, putative
LocationCmo_Chr13 : 8520524 .. 8521651 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCGTCCGGCGGTAACTCTGGCGACGGAGCTGGCGGTGGCGCCGCCTCGCATGGCCCTCAGCTCTTCTTCTGCTATACGTGCAATCGTACGGTAACCATTACTCCCTCATCATCCTCCGATCTTTTGTGCCCCAACTGCAACGATAGCTTCGTTGAAGAAATGGATAGTCCAAACCCTAACCCTAGCCCTGTTCCCAATCCTTTCCTCTCCTTCACATCCGAGGCATTTCCGCCGTTCAGCTCCGGTGGCGGTGGAAATGGAGGTTTCCCGATTATATTCTCCACGACATCATCATCCGGTGGCATTGGCGGTGGCGGTTCTATGATGAATGATCTATCGGCGCTATTGGGAGGCGGTTCTCATCGGTCGTCGTCCTTGCAAGACCCTGACGGTTTTAGTCCCTTGCTCTTCCTCCAGAACTATCTTCAAAGCGCTAATGTTCAATTGGTAATCCAGAACGCATCGGGAGAGGCGTTTCATCCATCTTCCAATTTCAATCTTGGAGATTACTTCTTCGGCCCTGGCCTCGAGCAGTTGATTCAACAACTTGCTGAAAACGATCCGAACCGTTATGGAACCCCTCCCGCTTCAAAGTCGTCGATTGAGGCACTTCCAAATATCAAAATTACGGAGGAATTGTTGGCCTCAGATTCTTCCCAGTGCGCTGTGTGTAAGGATACGTTTGAGCTCAACGAGGAGGCGAAACAGATGCCTTGCAAACACATATATCATGCAGATTGTATCATTCCATGGCTGGAATTGCATAATTCTTGTCCGGTATGTCGATATGAATTGCCCACAGATGATCCTGATTACGAGCAAAGGAATCGTGGGACTTCAGCTCCTAATCGAAGTCAAAGCGAAAGTCAACCCTTTGGTGATTCTTCTATCCGTGGGGAAAATGTTGGTGGAAGCGATCCTAATTCCGACGAGAATTCACCGAGTCAACATGAGCGGAGGGTTAGGAGGATAGCATTTCCTTGGCCATTCAGAGGTTTTGGTTCGGCCGCCGAGACTAGTAACAGCGGAGGTGGCAACAATAGTGGAAATAGCGACGAACCTAGCTCCAGAAATAGGGGAAATCAGAGCTCGTCAGAACCCATGCAGGAAGATCTTGATTGA

mRNA sequence

ATGTCTTCGTCCGGCGGTAACTCTGGCGACGGAGCTGGCGGTGGCGCCGCCTCGCATGGCCCTCAGCTCTTCTTCTGCTATACGTGCAATCGTACGGTAACCATTACTCCCTCATCATCCTCCGATCTTTTGTGCCCCAACTGCAACGATAGCTTCGTTGAAGAAATGGATAGTCCAAACCCTAACCCTAGCCCTGTTCCCAATCCTTTCCTCTCCTTCACATCCGAGGCATTTCCGCCGTTCAGCTCCGGTGGCGGTGGAAATGGAGGTTTCCCGATTATATTCTCCACGACATCATCATCCGGTGGCATTGGCGGTGGCGGTTCTATGATGAATGATCTATCGGCGCTATTGGGAGGCGGTTCTCATCGGTCGTCGTCCTTGCAAGACCCTGACGGTTTTAGTCCCTTGCTCTTCCTCCAGAACTATCTTCAAAGCGCTAATGTTCAATTGGTAATCCAGAACGCATCGGGAGAGGCGTTTCATCCATCTTCCAATTTCAATCTTGGAGATTACTTCTTCGGCCCTGGCCTCGAGCAGTTGATTCAACAACTTGCTGAAAACGATCCGAACCGTTATGGAACCCCTCCCGCTTCAAAGTCGTCGATTGAGGCACTTCCAAATATCAAAATTACGGAGGAATTGTTGGCCTCAGATTCTTCCCAGTGCGCTGTGTGTAAGGATACGTTTGAGCTCAACGAGGAGGCGAAACAGATGCCTTGCAAACACATATATCATGCAGATTGTATCATTCCATGGCTGGAATTGCATAATTCTTGTCCGGTATGTCGATATGAATTGCCCACAGATGATCCTGATTACGAGCAAAGGAATCGTGGGACTTCAGCTCCTAATCGAAGTCAAAGCGAAAGTCAACCCTTTGGTGATTCTTCTATCCGTGGGGAAAATGTTGGTGGAAGCGATCCTAATTCCGACGAGAATTCACCGAGTCAACATGAGCGGAGGGTTAGGAGGATAGCATTTCCTTGGCCATTCAGAGGTTTTGGTTCGGCCGCCGAGACTAGTAACAGCGGAGGTGGCAACAATAGTGGAAATAGCGACGAACCTAGCTCCAGAAATAGGGGAAATCAGAGCTCGTCAGAACCCATGCAGGAAGATCTTGATTGA

Coding sequence (CDS)

ATGTCTTCGTCCGGCGGTAACTCTGGCGACGGAGCTGGCGGTGGCGCCGCCTCGCATGGCCCTCAGCTCTTCTTCTGCTATACGTGCAATCGTACGGTAACCATTACTCCCTCATCATCCTCCGATCTTTTGTGCCCCAACTGCAACGATAGCTTCGTTGAAGAAATGGATAGTCCAAACCCTAACCCTAGCCCTGTTCCCAATCCTTTCCTCTCCTTCACATCCGAGGCATTTCCGCCGTTCAGCTCCGGTGGCGGTGGAAATGGAGGTTTCCCGATTATATTCTCCACGACATCATCATCCGGTGGCATTGGCGGTGGCGGTTCTATGATGAATGATCTATCGGCGCTATTGGGAGGCGGTTCTCATCGGTCGTCGTCCTTGCAAGACCCTGACGGTTTTAGTCCCTTGCTCTTCCTCCAGAACTATCTTCAAAGCGCTAATGTTCAATTGGTAATCCAGAACGCATCGGGAGAGGCGTTTCATCCATCTTCCAATTTCAATCTTGGAGATTACTTCTTCGGCCCTGGCCTCGAGCAGTTGATTCAACAACTTGCTGAAAACGATCCGAACCGTTATGGAACCCCTCCCGCTTCAAAGTCGTCGATTGAGGCACTTCCAAATATCAAAATTACGGAGGAATTGTTGGCCTCAGATTCTTCCCAGTGCGCTGTGTGTAAGGATACGTTTGAGCTCAACGAGGAGGCGAAACAGATGCCTTGCAAACACATATATCATGCAGATTGTATCATTCCATGGCTGGAATTGCATAATTCTTGTCCGGTATGTCGATATGAATTGCCCACAGATGATCCTGATTACGAGCAAAGGAATCGTGGGACTTCAGCTCCTAATCGAAGTCAAAGCGAAAGTCAACCCTTTGGTGATTCTTCTATCCGTGGGGAAAATGTTGGTGGAAGCGATCCTAATTCCGACGAGAATTCACCGAGTCAACATGAGCGGAGGGTTAGGAGGATAGCATTTCCTTGGCCATTCAGAGGTTTTGGTTCGGCCGCCGAGACTAGTAACAGCGGAGGTGGCAACAATAGTGGAAATAGCGACGAACCTAGCTCCAGAAATAGGGGAAATCAGAGCTCGTCAGAACCCATGCAGGAAGATCTTGATTGA
Homology
[Close]
BLAST of CmoCh13G009990 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 8.1e-69
Identity = 164/350 (46.86%), Postives = 201/350 (57.43%), Query Frame = 1 

Query: 3   SSGGNSGDGAGGGAASHGPQLFFCYTCNRTVTITPSS-SSDLLCPNCNDSFVEEMDSPNP 62
           SS GN   G G        + FFCY CNRTV +T S  SSD  CP CN+ F+EE D+PNP
Sbjct: 2   SSDGNVTGGGGANTVGVTNKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNP 61

Query: 63  N-------PSPVPNPFLSFTSEAFPPFSSGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDL 122
           N       P+P   PF         PF+S        P++F ++SS+          N+ 
Sbjct: 62  NQGSGFLNPNPNSIPFHDLFLTLSDPFASL------LPLLFPSSSSTTTSSSASIDPNNP 121

Query: 123 SALLGGGSHRSSSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQN-ASGEAFHPSSNFN 182
           S  L G +   S   DP  F P  F+QN+L       A ++ VIQN  S + F   +N  
Sbjct: 122 S--LSGPTR--SGRGDPFAFDPFTFIQNHLNDLRSSGAQIEFVIQNNPSDQGFRLPAN-- 181

Query: 183 LGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKD 242
           +GDYF GPGLEQLIQQLAENDPNRYGTPPASKS+IEALP + IT+  L S+ +QCAVC D
Sbjct: 182 IGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMD 241

Query: 243 TFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSAPNRSQ 302
            FE   EAKQMPCKH+YH DC++PWLELHNSCPVCR+ELPTDDPDYE+R RG        
Sbjct: 242 DFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYERRVRGA------- 301

Query: 303 SESQPFGDSSIRGENVGGSDPNSDENSPSQHE--RRVRRIAFPWPFRGFG 337
                      +G + G    NS + S   +    R  RI+ PWPF+  G
Sbjct: 302 -----------QGTSGGNDGDNSGQRSDGDNRTVERSFRISLPWPFQARG 321

[Close]
BLAST of CmoCh13G009990 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.4e-68
Identity = 167/362 (46.13%), Postives = 207/362 (57.18%), Query Frame = 1 

Query: 3   SSGGNSGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPNPN 62
           SSG NS   A   AA    ++FFCY CN+TVTI+ SSS+D  CP CN  F+EE + PNPN
Sbjct: 2   SSGVNSTGSAA--AAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPN 61

Query: 63  PSPVPNPFLSFTSEAFP---PFSSGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLG 122
            S   NP  + +   FP   PFS+        P+IF    SS     G   M+     + 
Sbjct: 62  QSLNFNP--NSSDSFFPMADPFSTL------LPLIFG---SSAAAPSGMDFMSLFGPSMQ 121

Query: 123 GGSHRSSSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQNASGEAFHPSSNFN-----L 182
             +  +      D F P  FLQN+LQ+      + + VI+N      HPS   N      
Sbjct: 122 PQARSTQQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIEN------HPSDPGNRMPGNF 181

Query: 183 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDT 242
           GDYFFGPGLEQLIQQLAENDPNRYGTPPASKS+I+ALP +K+T+++L S+ +QCAVC D 
Sbjct: 182 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDE 241

Query: 243 FELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSAPNRSQS 302
           FE   + KQMPCKH++H DC++PWLELHNSCPVCR+ELPTDDPDYE R++G         
Sbjct: 242 FEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQG--------- 301

Query: 303 ESQPFGDSSIRGENVGGSDPNSDENSPSQHERRVRRIAFPWPFR---GFGSAAETSNSGG 349
            SQ  GD   +G   G   P                I  PWPFR   G GS +    +GG
Sbjct: 302 -SQGSGDG--QGSVEGQQTPRFS-------------IQLPWPFRRQDGSGSGSGAPGTGG 319

[Close]
BLAST of CmoCh13G009990 vs. Swiss-Prot
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.4e-36
Identity = 125/339 (36.87%), Postives = 157/339 (46.31%), Query Frame = 1 

Query: 25  FCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPNPNPSPVPNPFLSFTSEAFPPFSSG 84
           +C+ C R V +      + +C  C   FVEE+D    +P              F  F S 
Sbjct: 9   WCHRCQRAVRL---HGQEPVCFYCGGGFVEELDMAQASP--------------FDMFRSH 68

Query: 85  GGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSHRSSSLQD-PDGFSPLLFLQNY 144
            G      ++    +          M N L+        R  ++   P+ F  L  L  +
Sbjct: 69  RG------VVERDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIF 128

Query: 145 LQSANVQLVIQNASGEAFHPSS------NFNLGDYFFGPGLEQLIQQLAENDPNRYGTPP 204
                 +L   NA    F+  S        N GDYFFGPGLE+L +QL+     R G PP
Sbjct: 129 GGQVPYRLTGDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPP 188

Query: 205 ASKSSIEALPNIKITEELLASDSSQCAVCKDTFELNEEAKQMPCKHIYHADCIIPWLELH 264
           A +S+I+ALP IKI +  L S  S C VCKD FEL  EAKQMPC HIYH+DCI+PWL  H
Sbjct: 189 APRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQH 248

Query: 265 NSCPVCRYELPTDDPDYEQRNRGTSAPNRSQSESQPFGDSSIRGENVGGSDPNSDENSPS 324
           NSCPVCR ELP+       +NR T   N   S S               S  NS EN   
Sbjct: 249 NSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSS--------------SSSSNSRENG-- 305

Query: 325 QHERRVRRIAFPWPFRGFG-SAAETSNSGGGNNSGNSDE 356
            +ERR    +F WPFR  G S++ T N GG  NS  SDE
Sbjct: 309 -NERRNPFSSF-WPFRSSGSSSSSTQNRGGTRNSDTSDE 305

[Close]
BLAST of CmoCh13G009990 vs. Swiss-Prot
Match: RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.4e-27
Identity = 81/257 (31.52%), Postives = 129/257 (50.19%), Query Frame = 1 

Query: 24  FFCYTCNRTVTI--TPSSSSDLLCPNCNDSFVEEM-DSPNPNPSPVP--NPFLSFTSEAF 83
           ++CY+C R +++     +++ +LCP CN  F+EE+ DS N   + +P   P +    E  
Sbjct: 31  YWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPASTPEVRSVEETH 90

Query: 84  PPFSSGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSHRSSSLQDPDGFSPLL 143
                    N             GG GG G  + +     G G+ R              
Sbjct: 91  RSIIRRRRSNRRTSFNPVIVLHGGGGGGAGERVENEE---GDGATR-------------- 150

Query: 144 FLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAE-----NDPNRY 203
                 +    +    + SG    P  + ++ +   G G E+L++QL++     N   R 
Sbjct: 151 ------ERRAYEFYYDDGSGSGLRPLPD-SVSEILMGSGFERLLEQLSQIEASGNGIGRS 210

Query: 204 GTPPASKSSIEALPNIKITEELLASDSSQCAVCKDTFELNEEAKQMPCKHIYHADCIIPW 263
           G PPASKS+IE+LP ++I++    ++++ CAVC + FE   E ++MPCKHI+H DCI+PW
Sbjct: 211 GNPPASKSAIESLPRVEISDCHTKAEAN-CAVCTEVFEAGIEGREMPCKHIFHGDCIVPW 262

Query: 264 LELHNSCPVCRYELPTD 271
           L + NSCPVCR+ELP+D
Sbjct: 271 LSIRNSCPVCRFELPSD 262

[Close]
BLAST of CmoCh13G009990 vs. Swiss-Prot
Match: RHC2A_ARATH (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana GN=RHC2A PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.5e-27
Identity = 88/267 (32.96%), Postives = 132/267 (49.44%), Query Frame = 1 

Query: 24  FFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSP---NPNPSPV---------PNPFL 83
           ++CY+C+R V ++ S S    CP+C+  F+E +  P    P+ S           P  F 
Sbjct: 6   YWCYSCSRFVWVSDSIS----CPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTRFP 65

Query: 84  SFTSEAFPPFSSGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSHRSSSLQDP 143
             +S +  P +S    N   P I + T S+          N +  L G  +  SS +   
Sbjct: 66  PPSSSSSTPSASMHADNSPTPTIVTRTRSNRS-------PNPVIVLRGSAAAPSSDV--- 125

Query: 144 DGFSPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPN 203
                   +   L  +  Q+   + +     P    ++ ++  G G ++L+ Q+++ + N
Sbjct: 126 --------VSEGLDRSAFQMYYDDGTDSGLRPLPP-SMTEFLLGSGFDRLLDQISQIELN 185

Query: 204 RYGT------PPASKSSIEALPNIKITEELLASDS-SQCAVCKDTFELNEEAKQMPCKHI 263
                     PPASKS+IEALP I+I    L SDS S CAVCK+ F L   A++MPC HI
Sbjct: 186 TNRNLRSCEHPPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHI 245

Query: 264 YHADCIIPWLELHNSCPVCRYELPTDD 272
           YH DCI+PWL + NSCPVCR+ELP +D
Sbjct: 246 YHPDCILPWLAIRNSCPVCRHELPAED 249

[Close]
BLAST of CmoCh13G009990 vs. TrEMBL
Match: A0A0A0LTV3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043100 PE=4 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 2.6e-191
Identity = 347/378 (91.80%), Postives = 360/378 (95.24%), Query Frame = 1 

Query: 1   MSSSGGNSGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPN 60
           MSSSGGNSGDGAGGG ASH PQL+FCYTCNRTVTITPSSSSDLLCPNCNDSFVEEM+SPN
Sbjct: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSSGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           PNPSPV NPFLSFTSEAFPPFS+GGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG
Sbjct: 61  PNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120

Query: 121 GSHRSSS-LQDPDGFSPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLE 180
           GS RSSS LQ+PDGF+PLLFLQNYLQSANVQLVIQNASGEAFHP SNFNLGDYFFGPGLE
Sbjct: 121 GSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE 180

Query: 181 QLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDTFELNEEAKQM 240
           QLIQQLAENDPNRYGTPPASKS+IE LP+IKITEELLA+DSSQCAVCKDTFEL+E AK M
Sbjct: 181 QLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLM 240

Query: 241 PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSAPNRSQSESQPFGDSSI 300
           PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQR RG+SAPNRSQSESQPFGDSS 
Sbjct: 241 PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSST 300

Query: 301 RGENVGGSDPNSDENSPSQH--ERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNSDEPS 360
            GENV GSDPNSDENS +Q   ERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGN+DEPS
Sbjct: 301 GGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPS 360

Query: 361 SRNRGNQSSSEPMQEDLD 376
           SRNRG+Q SSEPMQEDLD
Sbjct: 361 SRNRGSQGSSEPMQEDLD 378

[Close]
BLAST of CmoCh13G009990 vs. TrEMBL
Match: W9T1E8_9ROSA (E3 ubiquitin-protein ligase RING1 OS=Morus notabilis GN=L484_000879 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.3e-113
Identity = 242/390 (62.05%), Postives = 283/390 (72.56%), Query Frame = 1 

Query: 1   MSSSGGNSGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPN 60
           MSSSGGNSG   GGG     PQ +FC+ CNRTV+ITPS +SDL+CP C   F+EE+ +PN
Sbjct: 1   MSSSGGNSG---GGGIGISAPQPYFCHQCNRTVSITPSPTSDLVCPVCGGGFLEEVQNPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSSGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           P+P P PN F SF+S+          G  GFP++F+TTSSSG   GGG++++DL AL GG
Sbjct: 61  PSPEPSPNSFFSFSSD------DSSFGARGFPLLFTTTSSSGH--GGGALVDDLPALFGG 120

Query: 121 GSHRSSSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQNASGE--AFHPSSNFNLGDYF 180
              R S  +D D F+P  FLQNYLQ+     ANVQ VI    G+   F   +N NLGDYF
Sbjct: 121 PLTRVSQSEDTDAFNPFAFLQNYLQTLRATGANVQFVIDGNPGDPAGFRVPTNLNLGDYF 180

Query: 181 FGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDTFELN 240
           FGPGLEQLIQQLAENDPNRYGTPPASKS++E LP++KITEELLASDSSQCAVCKDTFEL 
Sbjct: 181 FGPGLEQLIQQLAENDPNRYGTPPASKSAMEGLPSVKITEELLASDSSQCAVCKDTFELG 240

Query: 241 EEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSAP-NRSQSE-- 300
           EEAKQMPCKHIYH++CI+PWLELHNSCPVCRYELPTDDPDYEQRNRGTS P N+SQ+   
Sbjct: 241 EEAKQMPCKHIYHSECILPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPANQSQAAGG 300

Query: 301 -SQPFGDSSIRGENVG-GSDPNSDEN--SPSQHERRVRRIAFPWPFRGFGSAAETSNSGG 360
            +   G  SI     G GS   S EN  +P   ERR   I+ P  FR FGS AETSN+G 
Sbjct: 301 FNISVGGGSINAVGDGSGSGATSGENPQTPRMVERRF-TISLPQLFRVFGSTAETSNTGS 360

Query: 361 GNNSGNSDEPSSRNRGNQSS-SEPMQEDLD 376
           GNN+GN++  +S NRGNQS+ SEP  EDLD
Sbjct: 361 GNNNGNNEGSNSENRGNQSTGSEPRHEDLD 378

[Close]
BLAST of CmoCh13G009990 vs. TrEMBL
Match: F6HVS8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0053g00320 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 5.1e-94
Identity = 215/387 (55.56%), Postives = 252/387 (65.12%), Query Frame = 1 

Query: 4   SGGNSGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPNPNP 63
           SGG+ G G GGG+A+  PQ +FCY CN TV+ITPS +SD LCP+CND F+EE+++PNPNP
Sbjct: 7   SGGSGGGGPGGGSAA--PQSYFCYQCNLTVSITPSPTSDPLCPHCNDGFLEEVENPNPNP 66

Query: 64  SPVP--NPFLSFTSEAFPPFSSGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGG 123
            PVP  NPFL F+    P  S+ G     FP +  +T++ G I    S+  D   L G  
Sbjct: 67  IPVPIPNPFLGFSD--LPSLSAAGATATAFPPLVFSTAAGGSIDLQNSV--DFPGLFGA- 126

Query: 124 SHRSSSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQNASGEAFHPSSNFNLGDYFFGP 183
                   DPD F P  FLQNYLQ+      NVQ VI   S E     S  NLGDYF GP
Sbjct: 127 --------DPDAFHPFAFLQNYLQTLRAGGTNVQFVIDGNSPEGTFRLSP-NLGDYFIGP 186

Query: 184 GLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDTFELNEEA 243
           GLEQLIQQLAENDPNRYGTPPASKS+IE LP I+IT ELL +DSSQCAVCKD+FEL+EEA
Sbjct: 187 GLEQLIQQLAENDPNRYGTPPASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEEA 246

Query: 244 KQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRG-------------TSA 303
           KQMPCKHIYH DCI+PWLELHNSCPVCRYELPTDDPDYE R RG              +A
Sbjct: 247 KQMPCKHIYHNDCILPWLELHNSCPVCRYELPTDDPDYEHRTRGGQVNQTGGNAAAVAAA 306

Query: 304 PNRSQSESQPFGDSSIRGENVGGSDPNSDENSPSQHERRVRRIAFPWPFRGFGSAAETSN 363
              S S S   G +++ GEN     P + +        R+ RI+FPWPFR FGS AETSN
Sbjct: 307 GAASNSASGAAGGAAVSGENPNPQTPRTAD--------RMFRISFPWPFRTFGSPAETSN 366

Query: 364 SG--GGNNSGN--SDEPSSRNR-GNQS 366
           S   GG+N GN  + E  S NR G+Q+
Sbjct: 367 SNNDGGSNPGNRANQESGSENRQGDQT 369

[Close]
BLAST of CmoCh13G009990 vs. TrEMBL
Match: A0A103Y8F4_CYNCS (Zinc finger, RING/FYVE/PHD-type OS=Cynara cardunculus var. scolymus GN=Ccrd_017249 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 5.1e-94
Identity = 214/390 (54.87%), Postives = 263/390 (67.44%), Query Frame = 1 

Query: 1   MSSSGGNSGDGAGGGAASHG--PQLFFCYTCNRTVTITPSS--SSDLLCPNCNDSFVEEM 60
           MS    + GDG GGG  +HG  P+L+FCY CN TV+I PS   SS+L CP+C+  F+EE 
Sbjct: 1   MSQGVYSGGDGVGGGN-THGAPPKLYFCYQCNHTVSIRPSPTVSSELFCPDCSGGFLEEY 60

Query: 61  DSPNPNPSPVPNPFLSFTSEA-FPPFSSGGGGNGGFPIIFSTTS-SSGGIGGGGSMMNDL 120
           ++PNP+ S  PNPFL+F  ++ F PFS+G      FP++FSTTS  SG          DL
Sbjct: 61  ENPNPS-STTPNPFLAFDDDSPFTPFSTG------FPLVFSTTSRGSGAASDDFQSPTDL 120

Query: 121 SALLGGGSHRSSSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQNASG---EAFHPSSN 180
           SAL GG   RS S Q+P  F+P  FLQNYL +     AN+Q VI+N S      FH  +N
Sbjct: 121 SALFGGPLSRSGSFQNPGEFNPFAFLQNYLSTLRAGGANIQFVIENNSDGDPSGFHLPAN 180

Query: 181 FNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVC 240
             LGDYF GPGLEQLIQQLAENDPNRYGTPPASKS +  LP+IKIT++LL SD S CAVC
Sbjct: 181 --LGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSVVRNLPSIKITDDLLESDYSDCAVC 240

Query: 241 KDTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRN-RGTSAPN 300
           KD+FEL+EEAKQ+PCKH+YH DCIIPWLELHNSCPVCR+ELPTDDP+YE R+  G+ A  
Sbjct: 241 KDSFELHEEAKQLPCKHVYHQDCIIPWLELHNSCPVCRFELPTDDPEYENRSCEGSVAAG 300

Query: 301 RSQSESQPFGDSSIRGENVGGSDPNSDENSPSQHERRVRRIAFPWPFRGFGSAAETSNSG 360
             ++     G +     +V G DP  +  +PS  ERR  RI+ PWPF GFG++AETSNSG
Sbjct: 301 GGRN----MGAARSGAASVSG-DPQENPETPSNTERRF-RISLPWPFTGFGASAETSNSG 360

Query: 361 GGN-NSGNSDEPSSRNRGNQSSSEPMQEDL 375
            GN NSG+S+        + S  +  QEDL
Sbjct: 361 AGNSNSGHSN--------SGSGGQDRQEDL 366

[Close]
BLAST of CmoCh13G009990 vs. TrEMBL
Match: A5C2A6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042386 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 6.6e-94
Identity = 216/391 (55.24%), Postives = 248/391 (63.43%), Query Frame = 1 

Query: 4   SGGNSGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPNPNP 63
           SGG+ G G G G  S  PQ +FCY CN TV+ITPS +SD LCP+CND F+EE+++PNPNP
Sbjct: 7   SGGSGGGGGGPGGGSAAPQSYFCYQCNLTVSITPSPTSDPLCPHCNDGFLEEVENPNPNP 66

Query: 64  SPVP--NPFLSFTSEAFPPFSSGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGG 123
            PVP  NPFL F+    P  S+ G     FP +  +T++ G I    S+  D   L G  
Sbjct: 67  IPVPIPNPFLGFSD--LPSLSAAGATATAFPPLVFSTAAGGSIDLQNSV--DFPGLFGA- 126

Query: 124 SHRSSSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQNASGEAFHPSSNFNLGDYFFGP 183
                   DPD F P  FLQNYLQ+      NVQ VI   S E     S  NLGDYF GP
Sbjct: 127 --------DPDAFHPFAFLQNYLQTLRAGGTNVQFVIDGNSPEGTFRLSP-NLGDYFIGP 186

Query: 184 GLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDTFELNEEA 243
           GLEQLIQQLAENDPNRYGTPPASKS+IE LP I+IT ELL +DSSQCAVCKD+FEL+EEA
Sbjct: 187 GLEQLIQQLAENDPNRYGTPPASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEEA 246

Query: 244 KQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRG-------------TSA 303
           KQMPCKHIYH DCI+PWLELHNSCPVCRYELPTDDPDYE R RG              +A
Sbjct: 247 KQMPCKHIYHNDCILPWLELHNSCPVCRYELPTDDPDYEHRTRGGQVNQTGGNAAAVAAA 306

Query: 304 PNRSQSESQPFGDSSIRGENVGGSDPNSDENSPSQHERRVRRIAFPWPFRGFGSAAETSN 363
              S S S   G +++ GEN     P + +        R+ RI+FPWPFR FGS AETSN
Sbjct: 307 GAASNSASGAAGGAAVSGENPNPQTPRTAD--------RMFRISFPWPFRTFGSPAETSN 366

Query: 364 SGGGNNSGNSDEPSSRNRGNQ-SSSEPMQED 374
           S   NN G   E +  NR NQ S SE  Q D
Sbjct: 367 S---NNDG---ESNPGNRANQESGSENRQGD 369

[Close]
BLAST of CmoCh13G009990 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 261.5 bits (667), Expect = 7.8e-70
Identity = 167/362 (46.13%), Postives = 207/362 (57.18%), Query Frame = 1 

Query: 3   SSGGNSGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPNPN 62
           SSG NS   A   AA    ++FFCY CN+TVTI+ SSS+D  CP CN  F+EE + PNPN
Sbjct: 2   SSGVNSTGSAA--AAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPN 61

Query: 63  PSPVPNPFLSFTSEAFP---PFSSGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLG 122
            S   NP  + +   FP   PFS+        P+IF    SS     G   M+     + 
Sbjct: 62  QSLNFNP--NSSDSFFPMADPFSTL------LPLIFG---SSAAAPSGMDFMSLFGPSMQ 121

Query: 123 GGSHRSSSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQNASGEAFHPSSNFN-----L 182
             +  +      D F P  FLQN+LQ+      + + VI+N      HPS   N      
Sbjct: 122 PQARSTQQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIEN------HPSDPGNRMPGNF 181

Query: 183 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDT 242
           GDYFFGPGLEQLIQQLAENDPNRYGTPPASKS+I+ALP +K+T+++L S+ +QCAVC D 
Sbjct: 182 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDE 241

Query: 243 FELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSAPNRSQS 302
           FE   + KQMPCKH++H DC++PWLELHNSCPVCR+ELPTDDPDYE R++G         
Sbjct: 242 FEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQG--------- 301

Query: 303 ESQPFGDSSIRGENVGGSDPNSDENSPSQHERRVRRIAFPWPFR---GFGSAAETSNSGG 349
            SQ  GD   +G   G   P                I  PWPFR   G GS +    +GG
Sbjct: 302 -SQGSGDG--QGSVEGQQTPRFS-------------IQLPWPFRRQDGSGSGSGAPGTGG 319

[Close]
BLAST of CmoCh13G009990 vs. TAIR10
Match: AT5G56340.1 (AT5G56340.1 RING/U-box superfamily protein)

HSP 1 Score: 171.8 bits (434), Expect = 8.1e-43
Identity = 95/208 (45.67%), Postives = 132/208 (63.46%), Query Frame = 1 

Query: 148 NVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALP 207
           N  LV+ +   +  HPS   +LGDYF GPGL+ L+Q LAENDPNR GTPPA K ++EALP
Sbjct: 192 NQSLVVPSDQNQN-HPSLT-SLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALP 251

Query: 208 NIKITEELLASDSSQCAVCKDTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYEL 267
            +KI E L      QC+VC D FE   EAK+MPCKH +H  CI+PWLELH+SCPVCR+EL
Sbjct: 252 TVKIMEPL------QCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFEL 311

Query: 268 PTDDPDYEQRNRGTSAPNRSQSESQPFGDSSIRGENVGGSDPNSDENSPSQHERRVRRIA 327
           P+   D ++    +    R+++  +    + +  ENVG +D   ++   S +    RR +
Sbjct: 312 PSSADDDDETKTDSERVLRTRNVRETSNGNVV--ENVGNADRGREDEVRSGNG---RRFS 371

Query: 328 FPWPFRG-FGSAAETSNSGGGNNSGNSD 355
           FPWPF G F S++ +S+S  G+ SG ++
Sbjct: 372 FPWPFSGLFSSSSSSSSSTSGSQSGENN 386

[Close]
BLAST of CmoCh13G009990 vs. TAIR10
Match: AT1G55530.1 (AT1G55530.1 RING/U-box superfamily protein)

HSP 1 Score: 165.6 bits (418), Expect = 5.8e-41
Identity = 85/206 (41.26%), Postives = 121/206 (58.74%), Query Frame = 1 

Query: 144 LQSANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSI 203
           + ++N  + +QN++     P+ +  LGDYF GPG E L+Q+LAENDPNRYGTPPA K ++
Sbjct: 152 INTSNQTITVQNSADMDSVPAGS--LGDYFIGPGFEMLLQRLAENDPNRYGTPPAKKEAV 211

Query: 204 EALPNIKITEELLASDSSQCAVCKDTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPVC 263
           EAL  +KI E L      QC+VC D FE+  EAK MPC H +H+DC++PWLELH+SCPVC
Sbjct: 212 EALATVKIEETL------QCSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHSSCPVC 271

Query: 264 RYELPTDDPDYE-----QRNRGTSAPNRSQSESQPFGDSSIRGENVGGSDPNSDENSPSQ 323
           RY+LP D+   +       N G+S+ + + S      D + R E     +   +E     
Sbjct: 272 RYQLPADEAKTDSVTTTSDNNGSSSASATTSHGAENSDGNRRQEE---EEEEEEEEEEEN 331

Query: 324 HERRVRRIAFPWPFRGFGSAAETSNS 345
                   + PWPF    S+++ SN+
Sbjct: 332 ENNDGSGFSIPWPFSTLFSSSQDSNA 346

[Close]
BLAST of CmoCh13G009990 vs. TAIR10
Match: AT2G40830.2 (AT2G40830.2 RING-H2 finger C1A)

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-37
Identity = 125/339 (36.87%), Postives = 157/339 (46.31%), Query Frame = 1 

Query: 25  FCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPNPNPSPVPNPFLSFTSEAFPPFSSG 84
           +C+ C R V +      + +C  C   FVEE+D    +P              F  F S 
Sbjct: 9   WCHRCQRAVRL---HGQEPVCFYCGGGFVEELDMAQASP--------------FDMFRSH 68

Query: 85  GGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSHRSSSLQD-PDGFSPLLFLQNY 144
            G      ++    +          M N L+        R  ++   P+ F  L  L  +
Sbjct: 69  RG------VVERDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIF 128

Query: 145 LQSANVQLVIQNASGEAFHPSS------NFNLGDYFFGPGLEQLIQQLAENDPNRYGTPP 204
                 +L   NA    F+  S        N GDYFFGPGLE+L +QL+     R G PP
Sbjct: 129 GGQVPYRLTGDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRR-GPPP 188

Query: 205 ASKSSIEALPNIKITEELLASDSSQCAVCKDTFELNEEAKQMPCKHIYHADCIIPWLELH 264
           A +S+I+ALP IKI +  L S  S C VCKD FEL  EAKQMPC HIYH+DCI+PWL  H
Sbjct: 189 APRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQH 248

Query: 265 NSCPVCRYELPTDDPDYEQRNRGTSAPNRSQSESQPFGDSSIRGENVGGSDPNSDENSPS 324
           NSCPVCR ELP+       +NR T   N   S S               S  NS EN   
Sbjct: 249 NSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSS--------------SSSSNSRENG-- 305

Query: 325 QHERRVRRIAFPWPFRGFG-SAAETSNSGGGNNSGNSDE 356
            +ERR    +F WPFR  G S++ T N GG  NS  SDE
Sbjct: 309 -NERRNPFSSF-WPFRSSGSSSSSTQNRGGTRNSDTSDE 305

[Close]
BLAST of CmoCh13G009990 vs. TAIR10
Match: AT3G56580.2 (AT3G56580.2 RING/U-box superfamily protein)

HSP 1 Score: 146.7 bits (369), Expect = 2.8e-35
Identity = 124/349 (35.53%), Postives = 159/349 (45.56%), Query Frame = 1 

Query: 25  FCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMD-SPNPNPSPVPNPFLSFTSEAFPPFSS 84
           +C+ C R V +    + D +C  C   FVEE+D  P+     V         EAF  F  
Sbjct: 9   WCHRCQRAVWLR---ARDAVCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFMR 68

Query: 85  GGGGNGGFPIIFSTTSSSGGIGGGGS-MMNDLSALLGGGSHRSSSLQDPDGFSPLLFLQN 144
                  +         SG +G  GS   ++L+ LL  G      L   D  S   F+  
Sbjct: 69  SRLAERSYD-----REISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAFV-- 128

Query: 145 YLQSANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSS 204
                       N +      +   N GDYFFGPGLE+LI+QL+    +R G PPA KSS
Sbjct: 129 ------------NGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHR-GPPPAPKSS 188

Query: 205 IEALPNIKITEELLASDSSQCAVCKDTFELNEEAKQMPCKHIYHADCIIPWLELHNSCPV 264
           I+ALP IKIT++ L S  S C VCKD FEL  EAKQMPC HIYH+DCI+PWL  HNSCPV
Sbjct: 189 IDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPV 248

Query: 265 CRYELPTDDPDYEQRNRGTSAPNRSQSESQPFGDSSIRGENVGGSDPNSDENSPSQHERR 324
           CR ELP         +RG+S+  +S                      N  ENS     RR
Sbjct: 249 CRKELP---------SRGSSSSTQSSQ----------------NRSTNGRENS-----RR 303

Query: 325 VRRIAFPWPFRGFGSAAETSNSGGGNNSGNSDEPSSRNRGNQSSSEPMQ 372
               +  WPFR   S++ T N    NN+  ++E    +   Q      Q
Sbjct: 309 RNIFSNLWPFRS-SSSSSTQNRRDTNNTATAEEGHYHHHQQQQQQHQHQ 303

[Close]
BLAST of CmoCh13G009990 vs. NCBI nr
Match: gi|659066950|ref|XP_008467256.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 680.6 bits (1755), Expect = 1.5e-192
Identity = 347/377 (92.04%), Postives = 361/377 (95.76%), Query Frame = 1 

Query: 1   MSSSGGNSGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPN 60
           MSSSGGNSGDGAGGGA S+ PQL+FCYTCNRTVTITPSSSSDLLCPNCNDSFVEEM+SPN
Sbjct: 1   MSSSGGNSGDGAGGGAVSYPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSSGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           PNPSPVPNPFLSFTSEAFPPFS+GGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG
Sbjct: 61  PNPSPVPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120

Query: 121 GSHRSSSLQDPDGFSPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLEQ 180
           GS RSSSLQ+PDGF+PLLFLQNYLQSANVQLVIQNASGEAFHP SNFNLGDYFFGPGLEQ
Sbjct: 121 GSLRSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLEQ 180

Query: 181 LIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDTFELNEEAKQMP 240
           LIQQLAENDPNRYGTPPASKS+IE LP+IKITEELLA+DSSQCAVCKDTFEL+E AK MP
Sbjct: 181 LIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLMP 240

Query: 241 CKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSAPNRSQSESQPFGDSSIR 300
           CKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQR R +SAPNRSQSESQPFGDSS  
Sbjct: 241 CKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRASSAPNRSQSESQPFGDSSTG 300

Query: 301 GENVGGSDPNSDENSPSQH--ERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNSDEPSS 360
           GENV GSDPNSDENS +Q   ERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGN+DEPSS
Sbjct: 301 GENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPSS 360

Query: 361 RNRGNQSSSEPMQEDLD 376
           RNRG+QSSSEPMQEDLD
Sbjct: 361 RNRGSQSSSEPMQEDLD 377

[Close]
BLAST of CmoCh13G009990 vs. NCBI nr
Match: gi|449439501|ref|XP_004137524.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus])

HSP 1 Score: 676.0 bits (1743), Expect = 3.7e-191
Identity = 347/378 (91.80%), Postives = 360/378 (95.24%), Query Frame = 1 

Query: 1   MSSSGGNSGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPN 60
           MSSSGGNSGDGAGGG ASH PQL+FCYTCNRTVTITPSSSSDLLCPNCNDSFVEEM+SPN
Sbjct: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSSGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           PNPSPV NPFLSFTSEAFPPFS+GGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG
Sbjct: 61  PNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120

Query: 121 GSHRSSS-LQDPDGFSPLLFLQNYLQSANVQLVIQNASGEAFHPSSNFNLGDYFFGPGLE 180
           GS RSSS LQ+PDGF+PLLFLQNYLQSANVQLVIQNASGEAFHP SNFNLGDYFFGPGLE
Sbjct: 121 GSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE 180

Query: 181 QLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDTFELNEEAKQM 240
           QLIQQLAENDPNRYGTPPASKS+IE LP+IKITEELLA+DSSQCAVCKDTFEL+E AK M
Sbjct: 181 QLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLM 240

Query: 241 PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSAPNRSQSESQPFGDSSI 300
           PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQR RG+SAPNRSQSESQPFGDSS 
Sbjct: 241 PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSST 300

Query: 301 RGENVGGSDPNSDENSPSQH--ERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNSDEPS 360
            GENV GSDPNSDENS +Q   ERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGN+DEPS
Sbjct: 301 GGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPS 360

Query: 361 SRNRGNQSSSEPMQEDLD 376
           SRNRG+Q SSEPMQEDLD
Sbjct: 361 SRNRGSQGSSEPMQEDLD 378

[Close]
BLAST of CmoCh13G009990 vs. NCBI nr
Match: gi|703069031|ref|XP_010088395.1| (E3 ubiquitin-protein ligase RING1 [Morus notabilis])

HSP 1 Score: 417.9 bits (1073), Expect = 1.8e-113
Identity = 242/390 (62.05%), Postives = 283/390 (72.56%), Query Frame = 1 

Query: 1   MSSSGGNSGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPN 60
           MSSSGGNSG   GGG     PQ +FC+ CNRTV+ITPS +SDL+CP C   F+EE+ +PN
Sbjct: 1   MSSSGGNSG---GGGIGISAPQPYFCHQCNRTVSITPSPTSDLVCPVCGGGFLEEVQNPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSSGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           P+P P PN F SF+S+          G  GFP++F+TTSSSG   GGG++++DL AL GG
Sbjct: 61  PSPEPSPNSFFSFSSD------DSSFGARGFPLLFTTTSSSGH--GGGALVDDLPALFGG 120

Query: 121 GSHRSSSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQNASGE--AFHPSSNFNLGDYF 180
              R S  +D D F+P  FLQNYLQ+     ANVQ VI    G+   F   +N NLGDYF
Sbjct: 121 PLTRVSQSEDTDAFNPFAFLQNYLQTLRATGANVQFVIDGNPGDPAGFRVPTNLNLGDYF 180

Query: 181 FGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDTFELN 240
           FGPGLEQLIQQLAENDPNRYGTPPASKS++E LP++KITEELLASDSSQCAVCKDTFEL 
Sbjct: 181 FGPGLEQLIQQLAENDPNRYGTPPASKSAMEGLPSVKITEELLASDSSQCAVCKDTFELG 240

Query: 241 EEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSAP-NRSQSE-- 300
           EEAKQMPCKHIYH++CI+PWLELHNSCPVCRYELPTDDPDYEQRNRGTS P N+SQ+   
Sbjct: 241 EEAKQMPCKHIYHSECILPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPANQSQAAGG 300

Query: 301 -SQPFGDSSIRGENVG-GSDPNSDEN--SPSQHERRVRRIAFPWPFRGFGSAAETSNSGG 360
            +   G  SI     G GS   S EN  +P   ERR   I+ P  FR FGS AETSN+G 
Sbjct: 301 FNISVGGGSINAVGDGSGSGATSGENPQTPRMVERRF-TISLPQLFRVFGSTAETSNTGS 360

Query: 361 GNNSGNSDEPSSRNRGNQSS-SEPMQEDLD 376
           GNN+GN++  +S NRGNQS+ SEP  EDLD
Sbjct: 361 GNNNGNNEGSNSENRGNQSTGSEPRHEDLD 378

[Close]
BLAST of CmoCh13G009990 vs. NCBI nr
Match: gi|658022966|ref|XP_008346897.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Malus domestica])

HSP 1 Score: 389.8 bits (1000), Expect = 5.3e-105
Identity = 229/397 (57.68%), Postives = 274/397 (69.02%), Query Frame = 1 

Query: 1   MSSSGGNSGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSPN 60
           MSSSGG+SG   GG  A   PQL+FC+ C+RTV++TPS +SDL+CP C+  F+EEM++PN
Sbjct: 1   MSSSGGHSGS-VGGPIA---PQLYFCHECDRTVSLTPSPTSDLVCPLCSGGFLEEMETPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSSGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           P+P P PNPF SF S   PPF+S G     FP++FS+ S+ G   G  ++ +DLSAL GG
Sbjct: 61  PSPFP-PNPFFSFPSSDAPPFASSG-----FPLLFSS-SAPGPAPGPANIADDLSALFGG 120

Query: 121 GSHRSSSLQDPDGFSPLLFLQNYLQS-----ANVQLVIQNASGEAFHPS-----SNFNLG 180
              RSS   DPD F+P +FLQNYLQ+     ANVQ VI +  G    PS     +N NLG
Sbjct: 121 APQRSSPFHDPDAFNPFVFLQNYLQTLRANGANVQFVIDSTPGGGGDPSGFRAPTNLNLG 180

Query: 181 DYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDTF 240
           DYFFGPGLEQLIQQLAENDPNRYGTPPASKS+IEAL  +KI+EELLASDSSQCAVCKD+F
Sbjct: 181 DYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALLVVKISEELLASDSSQCAVCKDSF 240

Query: 241 ELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSAPNRSQSE 300
           EL EEAKQMPCKHIYH+DCI+PWLELHN+CPVCR+ELPTDD +YEQR RG S      S+
Sbjct: 241 ELGEEAKQMPCKHIYHSDCILPWLELHNTCPVCRHELPTDDSEYEQRIRGESGNGNQTSQ 300

Query: 301 SQPFGDSSIR----------GENVGGSDPNSDENSPSQHERRVRRIAFPWPFRGFGSAAE 360
           S   G ++I           G  +G   P++   SP   ERR   I+ P  FR  G  AE
Sbjct: 301 SGALGGANISVGGGGSSSGFGFGIGAPSPDNQSPSPRTVERRF-TISLPRFFRQLGGTAE 360

Query: 361 TSNSGGGNNSGNSDEPSSRNRG--NQSSSEPMQEDLD 376
           TSN+G GNN    +E +S NRG  N  S EP QEDLD
Sbjct: 361 TSNTGSGNN----EESNSGNRGRHNSGSEEPRQEDLD 381

[Close]
BLAST of CmoCh13G009990 vs. NCBI nr
Match: gi|1009133460|ref|XP_015883912.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba])

HSP 1 Score: 389.0 bits (998), Expect = 9.1e-105
Identity = 231/387 (59.69%), Postives = 269/387 (69.51%), Query Frame = 1 

Query: 1   MSSSGGN-SGDGAGGGAASHGPQLFFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMDSP 60
           MSSSGG+  G G  G A +  PQL+FC+ C+RTVT+TPS ++DLLCP CN  FVEE+ +P
Sbjct: 1   MSSSGGSLGGAGVAGTAGAGSPQLYFCHVCDRTVTLTPSPTTDLLCPVCNGGFVEELGTP 60

Query: 61  NPNPSPVPNPFLSFTSEAFPPFSSGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLG 120
              P+P PN FL F+ E      S   G  GFP +FST +SSG   G  ++++DLSAL G
Sbjct: 61  ---PNPNPNTFLPFSHE------SPSLGAAGFPFLFSTAASSGPTSGPATVVDDLSALFG 120

Query: 121 GGSHRSSSL--QDPDGFSPLLFLQNYLQS-----ANVQLVIQNA-SGE--AFHPSSNFNL 180
            G  R+  L  QDPD F+P LFLQNYLQ+     ANVQ VI +  SG+   F   SN NL
Sbjct: 121 AGPTRNQHLTFQDPDAFNPFLFLQNYLQTLRANGANVQFVIDSGGSGDPAGFRVPSNLNL 180

Query: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSSIEALPNIKITEELLASDSSQCAVCKDT 240
           GDYFFGPGLEQLIQQLAENDPNRYGTPPASKS+I+ LP +KI+EELLASDSSQCAVCKDT
Sbjct: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIQGLPVVKISEELLASDSSQCAVCKDT 240

Query: 241 FELNEEAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRNRGTSAPNRSQS 300
           FEL EEAKQMPCKHIYH+DCI+PWLELHNSCPVCRYELPTDDPDYEQR R  S       
Sbjct: 241 FELGEEAKQMPCKHIYHSDCIVPWLELHNSCPVCRYELPTDDPDYEQRTREGSGVGNQSR 300

Query: 301 ESQPFGDSSIRGENVGGSDPNSDENSPSQHERRVRRIAFPWPFRGFGSAAETSNSGGGNN 360
               F  SS   +   G+   S EN P+    R  R++ P  FR FGS AETSNSG GNN
Sbjct: 301 TGGGFNASSGGNDGGTGTGAASGENPPTP---RSFRVSLPRLFRVFGSPAETSNSGSGNN 360

Query: 361 SGNSDEPSSRNRGNQSSS-EPMQEDLD 376
            G +   ++ NRGN +S  EP QEDLD
Sbjct: 361 DGAT---NTGNRGNPNSGPEPRQEDLD 372

The following BLAST results are available for this feature:
BLAST of CmoCh13G009990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RING1_GOSHI8.1e-6946.86E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1[more]
RNG1L_ARATH1.4e-6846.13E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
RHC1A_ARATH2.4e-3636.87Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2... [more]
RDUF1_ARATH3.4e-2731.52E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1[more]
RHC2A_ARATH4.5e-2732.96Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana GN=RHC2A PE=2... [more]
BLAST of CmoCh13G009990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTV3_CUCSA2.6e-19191.80Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043100 PE=4 SV=1[more]
W9T1E8_9ROSA1.3e-11362.05E3 ubiquitin-protein ligase RING1 OS=Morus notabilis GN=L484_000879 PE=4 SV=1[more]
F6HVS8_VITVI5.1e-9455.56Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0053g00320 PE=4 SV=... [more]
A0A103Y8F4_CYNCS5.1e-9454.87Zinc finger, RING/FYVE/PHD-type OS=Cynara cardunculus var. scolymus GN=Ccrd_0172... [more]
A5C2A6_VITVI6.6e-9455.24Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042386 PE=4 SV=1[more]
BLAST of CmoCh13G009990 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19950.17.8e-7046.13 RING/U-box superfamily protein[more]
AT5G56340.18.1e-4345.67 RING/U-box superfamily protein[more]
AT1G55530.15.8e-4141.26 RING/U-box superfamily protein[more]
AT2G40830.21.3e-3736.87 RING-H2 finger C1A[more]
AT3G56580.22.8e-3535.53 RING/U-box superfamily protein[more]
BLAST of CmoCh13G009990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659066950|ref|XP_008467256.1|1.5e-19292.04PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo][more]
gi|449439501|ref|XP_004137524.1|3.7e-19191.80PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus][more]
gi|703069031|ref|XP_010088395.1|1.8e-11362.05E3 ubiquitin-protein ligase RING1 [Morus notabilis][more]
gi|658022966|ref|XP_008346897.1|5.3e-10557.68PREDICTED: E3 ubiquitin-protein ligase RING1-like [Malus domestica][more]
gi|1009133460|ref|XP_015883912.1|9.1e-10559.69PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh13G009990.1CmoCh13G009990.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 222..264
score: 1.8
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 223..263
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 223..264
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 219..267
score: 2.1
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 16..374
score: 2.2E
NoneNo IPR availablePANTHERPTHR22763:SF5E3 UBIQUITIN-PROTEIN LIGASE CIP8coord: 16..374
score: 2.2E
NoneNo IPR availablePFAMPF14369zinc_ribbon_9coord: 23..56
score: 1.2
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 204..271
score: 1.56