ClCG01G014860 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G014860
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRING/U-box superfamily protein LENGTH=328
LocationCG_Chr01 : 29194182 .. 29195312 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCGTCCGGTGGCAACTCTGGCGACGGAGCGGGCGGTGGCGCCGCCTCCCATGCCCCTCAGCTCTACTTCTGCTATACCTGCAATCGTACGGTAACCATTACTCCCTCATCATCCTCCGATCTTTTATGCCCCAACTGCAACGATAGCTTCGTTGAAGAAATGGAAAGCCCAAACCCTAACCCTAGCCCCGTTCCGAATCCTTTCCTCTCCTTCACATCCGAGGCATTTCCGCCGTTCAGCACCGGTGGCGGTGGAAGTGGCGGTTTCCCCATCATATTCTCCACGACATCATCATCCGGTGGCATTGGCGGTGGCGGTTCTATGATGAATGATCTATCAGCGCTATTGGGAGGCGGTTCTCTTCGATCGTCGTCCTTGCAAGACCCTGACGGTTTTAATCCCTTGCTCTTCCTCCAGAACTATCTTCAAAGCGCTAATGTTCAATTGGTAATCCAAAACGCCTCAGGAGAGGCGTTTCATCCCCCTTCCAATTTCAATCTTGGCGACTACTTCTTCGGCCCCGGCCTCGAGCAGTTGATTCAACAACTTGCTGAAAACGATCCGAACCGTTATGGAACCCCTCCCGCTTCAAAGTCGGCGATTGAGGCACTTCCAGATATCAAGATCACGGAGGAATTGTTGGCCTCGGATTCTTCGCAGTGCGCTGTGTGTAAGGATACGTTTGAGCTCAACGAGGTGGCGAAACAGATGCCTTGCAAACACATATATCATGCAGATTGTATAATTCCTTGGTTGGAATTGCATAATTCTTGTCCAGTATGTCGATATGAATTGCCCACAGATGATCCCGATTACGAGCAAAGGACTCGTGGGTCTACAGCTCCTAATCGAAGTCAAAGCGAAAGTCAACCCTTTGGCGATTCTGCCACTGGTGGGGAAATTGTTGGTGGAACCGATCCTAATTCCGACGAGAATTCACAGACTCAACAAATGGCAGAGCGGAGGGTTAGGAGGATAGCTTTTCCTTGGCCCTTCAGAGGTTTTGGTTCAGCCGCTGAGACTAGTAACAGCGGAGGTGGCAACAGTGGAAATAGTGACGAACCTAGCTCCAGAAATAGGGGAAGTCAGAGCTCTTCAGAGCCCATGCAGGAAGATCTCGATTGA

mRNA sequence

ATGTCTTCGTCCGGTGGCAACTCTGGCGACGGAGCGGGCGGTGGCGCCGCCTCCCATGCCCCTCAGCTCTACTTCTGCTATACCTGCAATCGTACGGTAACCATTACTCCCTCATCATCCTCCGATCTTTTATGCCCCAACTGCAACGATAGCTTCGTTGAAGAAATGGAAAGCCCAAACCCTAACCCTAGCCCCGTTCCGAATCCTTTCCTCTCCTTCACATCCGAGGCATTTCCGCCGTTCAGCACCGGTGGCGGTGGAAGTGGCGGTTTCCCCATCATATTCTCCACGACATCATCATCCGGTGGCATTGGCGGTGGCGGTTCTATGATGAATGATCTATCAGCGCTATTGGGAGGCGGTTCTCTTCGATCGTCGTCCTTGCAAGACCCTGACGGTTTTAATCCCTTGCTCTTCCTCCAGAACTATCTTCAAAGCGCTAATGTTCAATTGGTAATCCAAAACGCCTCAGGAGAGGCGTTTCATCCCCCTTCCAATTTCAATCTTGGCGACTACTTCTTCGGCCCCGGCCTCGAGCAGTTGATTCAACAACTTGCTGAAAACGATCCGAACCGTTATGGAACCCCTCCCGCTTCAAAGTCGGCGATTGAGGCACTTCCAGATATCAAGATCACGGAGGAATTGTTGGCCTCGGATTCTTCGCAGTGCGCTGTGTGTAAGGATACGTTTGAGCTCAACGAGGTGGCGAAACAGATGCCTTGCAAACACATATATCATGCAGATTGTATAATTCCTTGGTTGGAATTGCATAATTCTTGTCCAGTATGTCGATATGAATTGCCCACAGATGATCCCGATTACGAGCAAAGGACTCGTGGGTCTACAGCTCCTAATCGAAGTCAAAGCGAAAGTCAACCCTTTGGCGATTCTGCCACTGGTGGGGAAATTGTTGGTGGAACCGATCCTAATTCCGACGAGAATTCACAGACTCAACAAATGGCAGAGCGGAGGGTTAGGAGGATAGCTTTTCCTTGGCCCTTCAGAGGTTTTGGTTCAGCCGCTGAGACTAGTAACAGCGGAGGTGGCAACAGTGGAAATAGTGACGAACCTAGCTCCAGAAATAGGGGAAGTCAGAGCTCTTCAGAGCCCATGCAGGAAGATCTCGATTGA

Coding sequence (CDS)

ATGTCTTCGTCCGGTGGCAACTCTGGCGACGGAGCGGGCGGTGGCGCCGCCTCCCATGCCCCTCAGCTCTACTTCTGCTATACCTGCAATCGTACGGTAACCATTACTCCCTCATCATCCTCCGATCTTTTATGCCCCAACTGCAACGATAGCTTCGTTGAAGAAATGGAAAGCCCAAACCCTAACCCTAGCCCCGTTCCGAATCCTTTCCTCTCCTTCACATCCGAGGCATTTCCGCCGTTCAGCACCGGTGGCGGTGGAAGTGGCGGTTTCCCCATCATATTCTCCACGACATCATCATCCGGTGGCATTGGCGGTGGCGGTTCTATGATGAATGATCTATCAGCGCTATTGGGAGGCGGTTCTCTTCGATCGTCGTCCTTGCAAGACCCTGACGGTTTTAATCCCTTGCTCTTCCTCCAGAACTATCTTCAAAGCGCTAATGTTCAATTGGTAATCCAAAACGCCTCAGGAGAGGCGTTTCATCCCCCTTCCAATTTCAATCTTGGCGACTACTTCTTCGGCCCCGGCCTCGAGCAGTTGATTCAACAACTTGCTGAAAACGATCCGAACCGTTATGGAACCCCTCCCGCTTCAAAGTCGGCGATTGAGGCACTTCCAGATATCAAGATCACGGAGGAATTGTTGGCCTCGGATTCTTCGCAGTGCGCTGTGTGTAAGGATACGTTTGAGCTCAACGAGGTGGCGAAACAGATGCCTTGCAAACACATATATCATGCAGATTGTATAATTCCTTGGTTGGAATTGCATAATTCTTGTCCAGTATGTCGATATGAATTGCCCACAGATGATCCCGATTACGAGCAAAGGACTCGTGGGTCTACAGCTCCTAATCGAAGTCAAAGCGAAAGTCAACCCTTTGGCGATTCTGCCACTGGTGGGGAAATTGTTGGTGGAACCGATCCTAATTCCGACGAGAATTCACAGACTCAACAAATGGCAGAGCGGAGGGTTAGGAGGATAGCTTTTCCTTGGCCCTTCAGAGGTTTTGGTTCAGCCGCTGAGACTAGTAACAGCGGAGGTGGCAACAGTGGAAATAGTGACGAACCTAGCTCCAGAAATAGGGGAAGTCAGAGCTCTTCAGAGCCCATGCAGGAAGATCTCGATTGA

Protein sequence

MSSSGGNSGDGAGGGAASHAPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPNPNPSPVPNPFLSFTSEAFPPFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSLRSSSLQDPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCKDTFELNEVAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSTAPNRSQSESQPFGDSATGGEIVGGTDPNSDENSQTQQMAERRVRRIAFPWPFRGFGSAAETSNSGGGNSGNSDEPSSRNRGSQSSSEPMQEDLD
Homology
[Close]
BLAST of ClCG01G014860 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 6.2e-77
Identity = 174/365 (47.67%), Postives = 212/365 (58.08%), Query Frame = 1 

Query: 3   SSGGNSGDGAGGGAASHAPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPNPN 62
           SSG NS   A   AA    +++FCY CN+TVTI+ SSS+D  CP CN  F+EE E PNPN
Sbjct: 2   SSGVNSTGSAA--AAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPN 61

Query: 63  PSPVPNPFLSFTSEAFP---PFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDLSALLG 122
            S   NP  + +   FP   PFST        P+IF    SS     G   M+     L 
Sbjct: 62  QSLNFNP--NSSDSFFPMADPFSTL------LPLIFG---SSAAAPSGMDFMS-----LF 121

Query: 123 GGSLRS---SSLQDP--DGFNPLLFLQNYLQS-----ANVQLVIQN-ASGEAFHPPSNFN 182
           G S++    S+ Q+P  D F+P  FLQN+LQ+      + + VI+N  S      P NF 
Sbjct: 122 GPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNF- 181

Query: 183 LGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCKD 242
            GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI+ALP +K+T+++L S+ +QCAVC D
Sbjct: 182 -GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMD 241

Query: 243 TFELNEVAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSTAPNRSQ 302
            FE     KQMPCKH++H DC++PWLELHNSCPVCR+ELPTDDPDYE R++GS       
Sbjct: 242 EFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGSQG----- 301

Query: 303 SESQPFGDSATGGEIVGGTDPNSDENSQTQQMAERRVRRIAFPWPFR---GFGSAAETSN 351
                            G    S E  QT + +      I  PWPFR   G GS +    
Sbjct: 302 ----------------SGDGQGSVEGQQTPRFS------IQLPWPFRRQDGSGSGSGAPG 319

[Close]
BLAST of ClCG01G014860 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 4.4e-75
Identity = 163/350 (46.57%), Postives = 198/350 (56.57%), Query Frame = 1 

Query: 3   SSGGNSGDGAGGGAASHAPQLYFCYTCNRTVTITPSS-SSDLLCPNCNDSFVEEMESPNP 62
           SS GN   G G        + +FCY CNRTV +T S  SSD  CP CN+ F+EE ++PNP
Sbjct: 2   SSDGNVTGGGGANTVGVTNKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNP 61

Query: 63  N-------PSPVPNPFLSFTSEAFPPFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDL 122
           N       P+P   PF         PF++        P++F ++SS+          N+ 
Sbjct: 62  NQGSGFLNPNPNSIPFHDLFLTLSDPFASL------LPLLFPSSSSTTTSSSASIDPNNP 121

Query: 123 SALLGGGSLRSSSLQDPDGFNPLLFLQNYLQS-----ANVQLVIQN-ASGEAFHPPSNFN 182
           S     G  RS    DP  F+P  F+QN+L       A ++ VIQN  S + F  P+N  
Sbjct: 122 SL---SGPTRSGR-GDPFAFDPFTFIQNHLNDLRSSGAQIEFVIQNNPSDQGFRLPAN-- 181

Query: 183 LGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCKD 242
           +GDYF GPGLEQLIQQLAENDPNRYGTPPASKSAIEALP + IT+  L S+ +QCAVC D
Sbjct: 182 IGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMD 241

Query: 243 TFELNEVAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSTAPNRSQ 302
            FE    AKQMPCKH+YH DC++PWLELHNSCPVCR+ELPTDDPDYE+R RG+       
Sbjct: 242 DFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYERRVRGA------- 301

Query: 303 SESQPFGDSATGGEIVGGTDPNSDENSQTQQMAERRVRRIAFPWPFRGFG 339
                     T G   G    NS + S        R  RI+ PWPF+  G
Sbjct: 302 --------QGTSG---GNDGDNSGQRSDGDNRTVERSFRISLPWPFQARG 321

[Close]
BLAST of ClCG01G014860 vs. Swiss-Prot
Match: RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.8e-39
Identity = 119/348 (34.20%), Postives = 162/348 (46.55%), Query Frame = 1 

Query: 18  SHAPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPNPNPSPVPNPFLSFTSEA 77
           S +   ++C+ C R V +      + +C  C   FVEE++    +P              
Sbjct: 2   SSSRNTHWCHRCQRAVRL---HGQEPVCFYCGGGFVEELDMAQASP-------------- 61

Query: 78  FPPFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSLRSSSLQD-PDGFNP 137
           F  F +  G      ++    +          M N L+       +R  ++   P+ F  
Sbjct: 62  FDMFRSHRG------VVERDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPG 121

Query: 138 LLFLQNYLQSANVQLVIQNASGEAFHPPS------NFNLGDYFFGPGLEQLIQQLAENDP 197
           L  L  +      +L   NA    F+  S        N GDYFFGPGLE+L +QL+    
Sbjct: 122 LAPLLIFGGQVPYRLTGDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTT 181

Query: 198 NRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCKDTFELNEVAKQMPCKHIYHADCI 257
            R G PPA +SAI+ALP IKI +  L S  S C VCKD FEL   AKQMPC HIYH+DCI
Sbjct: 182 RR-GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCI 241

Query: 258 IPWLELHNSCPVCRYELPTDDPDYEQRTRGSTAPNRSQSESQPFGDSATGGEIVGGTDPN 317
           +PWL  HNSCPVCR ELP+           ++ P+ SQ+ + P  +  +       +  N
Sbjct: 242 VPWLVQHNSCPVCRQELPS-----------ASGPSSSQNRTTPTRNYRSSS---SSSSSN 301

Query: 318 SDENSQTQQMAERRVRRIAFPWPFRGFGSAAETSNSGGG--NSGNSDE 357
           S EN       ERR    +F WPFR  GS++ ++ + GG  NS  SDE
Sbjct: 302 SRENGN-----ERRNPFSSF-WPFRSSGSSSSSTQNRGGTRNSDTSDE 305

[Close]
BLAST of ClCG01G014860 vs. Swiss-Prot
Match: RHC2A_ARATH (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana GN=RHC2A PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 8.7e-31
Identity = 93/267 (34.83%), Postives = 133/267 (49.81%), Query Frame = 1 

Query: 24  YFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESP---NPNPSPV---------PNPFL 83
           Y+CY+C+R V ++ S S    CP+C+  F+E ++ P    P+ S           P  F 
Sbjct: 6   YWCYSCSRFVWVSDSIS----CPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTRFP 65

Query: 84  SFTSEAFPPFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSLRSSSLQDP 143
             +S +  P ++    +   P I + T S+          N +  L G  +  SS +   
Sbjct: 66  PPSSSSSTPSASMHADNSPTPTIVTRTRSNRS-------PNPVIVLRGSAAAPSSDVVS- 125

Query: 144 DGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLEQLIQQLAENDPN 203
           +G +   F   Y    +        SG    PPS   + ++  G G ++L+ Q+++ + N
Sbjct: 126 EGLDRSAFQMYYDDGTD--------SGLRPLPPS---MTEFLLGSGFDRLLDQISQIELN 185

Query: 204 RYGT------PPASKSAIEALPDIKITEELLASDS-SQCAVCKDTFELNEVAKQMPCKHI 263
                     PPASKSAIEALP I+I    L SDS S CAVCK+ F L   A++MPC HI
Sbjct: 186 TNRNLRSCEHPPASKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHI 245

Query: 264 YHADCIIPWLELHNSCPVCRYELPTDD 272
           YH DCI+PWL + NSCPVCR+ELP +D
Sbjct: 246 YHPDCILPWLAIRNSCPVCRHELPAED 249

[Close]
BLAST of ClCG01G014860 vs. Swiss-Prot
Match: RDUF1_ARATH (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.3e-30
Identity = 81/257 (31.52%), Postives = 126/257 (49.03%), Query Frame = 1 

Query: 24  YFCYTCNRTVTI--TPSSSSDLLCPNCNDSFVEEME-SPNPNPSPVP--NPFLSFTSEAF 83
           Y+CY+C R +++     +++ +LCP CN  F+EE+E S N   + +P   P +    E  
Sbjct: 31  YWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPASTPEVRSVEETH 90

Query: 84  PPFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSLRSSSLQDPDGFNPLL 143
                    +             GG GG G  + +     G G+ R              
Sbjct: 91  RSIIRRRRSNRRTSFNPVIVLHGGGGGGAGERVENEE---GDGATR-------------- 150

Query: 144 FLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLEQLIQQLAE-----NDPNRY 203
                 +    +    + SG    P  + ++ +   G G E+L++QL++     N   R 
Sbjct: 151 ------ERRAYEFYYDDGSGSGLRPLPD-SVSEILMGSGFERLLEQLSQIEASGNGIGRS 210

Query: 204 GTPPASKSAIEALPDIKITEELLASDSSQCAVCKDTFELNEVAKQMPCKHIYHADCIIPW 263
           G PPASKSAIE+LP ++I++    ++++ CAVC + FE     ++MPCKHI+H DCI+PW
Sbjct: 211 GNPPASKSAIESLPRVEISDCHTKAEAN-CAVCTEVFEAGIEGREMPCKHIFHGDCIVPW 262

Query: 264 LELHNSCPVCRYELPTD 271
           L + NSCPVCR+ELP+D
Sbjct: 271 LSIRNSCPVCRFELPSD 262

[Close]
BLAST of ClCG01G014860 vs. TrEMBL
Match: A0A0A0LTV3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043100 PE=4 SV=1)

HSP 1 Score: 737.6 bits (1903), Expect = 7.3e-210
Identity = 359/378 (94.97%), Postives = 367/378 (97.09%), Query Frame = 1 

Query: 1   MSSSGGNSGDGAGGGAASHAPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60
           MSSSGGNSGDGAGGG ASH PQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN
Sbjct: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           PNPSPV NPFLSFTSEAFPPFSTGGGG+GGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG
Sbjct: 61  PNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120

Query: 121 GSLRS-SSLQDPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE 180
           GSLRS SSLQ+PDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE
Sbjct: 121 GSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE 180

Query: 181 QLIQQLAENDPNRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCKDTFELNEVAKQM 240
           QLIQQLAENDPNRYGTPPASKSAIE LPDIKITEELLA+DSSQCAVCKDTFEL+EVAK M
Sbjct: 181 QLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLM 240

Query: 241 PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSTAPNRSQSESQPFGDSAT 300
           PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGS+APNRSQSESQPFGDS+T
Sbjct: 241 PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSST 300

Query: 301 GGEIVGGTDPNSDENSQTQQMAERRVRRIAFPWPFRGFGSAAETSNSGGG-NSGNSDEPS 360
           GGE V G+DPNSDENSQTQQM ERRVRRIAFPWPFRGFGSAAETSNSGGG NSGN+DEPS
Sbjct: 301 GGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPS 360

Query: 361 SRNRGSQSSSEPMQEDLD 377
           SRNRGSQ SSEPMQEDLD
Sbjct: 361 SRNRGSQGSSEPMQEDLD 378

[Close]
BLAST of ClCG01G014860 vs. TrEMBL
Match: W9T1E8_9ROSA (E3 ubiquitin-protein ligase RING1 OS=Morus notabilis GN=L484_000879 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 6.6e-126
Identity = 242/390 (62.05%), Postives = 283/390 (72.56%), Query Frame = 1 

Query: 1   MSSSGGNSGDGAGGGAASHAPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60
           MSSSGGNSG   GGG    APQ YFC+ CNRTV+ITPS +SDL+CP C   F+EE+++PN
Sbjct: 1   MSSSGGNSG---GGGIGISAPQPYFCHQCNRTVSITPSPTSDLVCPVCGGGFLEEVQNPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           P+P P PN F SF+S+          G+ GFP++F+TTSSSG   GGG++++DL AL GG
Sbjct: 61  PSPEPSPNSFFSFSSD------DSSFGARGFPLLFTTTSSSGH--GGGALVDDLPALFGG 120

Query: 121 GSLRSSSLQDPDGFNPLLFLQNYLQS-----ANVQLVIQNASGE--AFHPPSNFNLGDYF 180
              R S  +D D FNP  FLQNYLQ+     ANVQ VI    G+   F  P+N NLGDYF
Sbjct: 121 PLTRVSQSEDTDAFNPFAFLQNYLQTLRATGANVQFVIDGNPGDPAGFRVPTNLNLGDYF 180

Query: 181 FGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCKDTFELN 240
           FGPGLEQLIQQLAENDPNRYGTPPASKSA+E LP +KITEELLASDSSQCAVCKDTFEL 
Sbjct: 181 FGPGLEQLIQQLAENDPNRYGTPPASKSAMEGLPSVKITEELLASDSSQCAVCKDTFELG 240

Query: 241 EVAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSTAPNRSQSESQP 300
           E AKQMPCKHIYH++CI+PWLELHNSCPVCRYELPTDDPDYEQR RG++ P      +  
Sbjct: 241 EEAKQMPCKHIYHSECILPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPANQSQAAGG 300

Query: 301 FGDSATGGEI--VG---GTDPNSDENSQTQQMAERRVRRIAFPWPFRGFGSAAETSNSG- 360
           F  S  GG I  VG   G+   S EN QT +M ERR   I+ P  FR FGS AETSN+G 
Sbjct: 301 FNISVGGGSINAVGDGSGSGATSGENPQTPRMVERRF-TISLPQLFRVFGSTAETSNTGS 360

Query: 361 GGNSGNSDEPSSRNRGSQSS-SEPMQEDLD 377
           G N+GN++  +S NRG+QS+ SEP  EDLD
Sbjct: 361 GNNNGNNEGSNSENRGNQSTGSEPRHEDLD 378

[Close]
BLAST of ClCG01G014860 vs. TrEMBL
Match: F6HVS8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0053g00320 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 2.6e-106
Identity = 219/379 (57.78%), Postives = 250/379 (65.96%), Query Frame = 1 

Query: 4   SGGNSGDGAGGGAASHAPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPNPNP 63
           SGG+ G G GGG+A  APQ YFCY CN TV+ITPS +SD LCP+CND F+EE+E+PNPNP
Sbjct: 7   SGGSGGGGPGGGSA--APQSYFCYQCNLTVSITPSPTSDPLCPHCNDGFLEEVENPNPNP 66

Query: 64  SPVP--NPFLSFTSEAFPPFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGG 123
            PVP  NPFL F+    P  S  G  +  FP +  +T++ G I    S+  D   L G  
Sbjct: 67  IPVPIPNPFLGFSD--LPSLSAAGATATAFPPLVFSTAAGGSIDLQNSV--DFPGLFGA- 126

Query: 124 SLRSSSLQDPDGFNPLLFLQNYLQS-----ANVQLVIQNASGEAFHPPSNFNLGDYFFGP 183
                   DPD F+P  FLQNYLQ+      NVQ VI   S E     S  NLGDYF GP
Sbjct: 127 --------DPDAFHPFAFLQNYLQTLRAGGTNVQFVIDGNSPEGTFRLSP-NLGDYFIGP 186

Query: 184 GLEQLIQQLAENDPNRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCKDTFELNEVA 243
           GLEQLIQQLAENDPNRYGTPPASKSAIE LP I+IT ELL +DSSQCAVCKD+FEL+E A
Sbjct: 187 GLEQLIQQLAENDPNRYGTPPASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEEA 246

Query: 244 KQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTR--------GSTAPNRSQ 303
           KQMPCKHIYH DCI+PWLELHNSCPVCRYELPTDDPDYE RTR        G+ A   + 
Sbjct: 247 KQMPCKHIYHNDCILPWLELHNSCPVCRYELPTDDPDYEHRTRGGQVNQTGGNAAAVAAA 306

Query: 304 SESQPFGDSATGGEIVGGTDPNSDENSQTQQMAERRVRRIAFPWPFRGFGSAAETSNS-- 363
             +      A GG  V G +P    N QT + A+ R+ RI+FPWPFR FGS AETSNS  
Sbjct: 307 GAASNSASGAAGGAAVSGENP----NPQTPRTAD-RMFRISFPWPFRTFGSPAETSNSNN 364

[Close]
BLAST of ClCG01G014860 vs. TrEMBL
Match: A5C2A6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042386 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 4.4e-106
Identity = 215/384 (55.99%), Postives = 247/384 (64.32%), Query Frame = 1 

Query: 4   SGGNSGDGAGGGAASHAPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPNPNP 63
           SGG+ G G G G  S APQ YFCY CN TV+ITPS +SD LCP+CND F+EE+E+PNPNP
Sbjct: 7   SGGSGGGGGGPGGGSAAPQSYFCYQCNLTVSITPSPTSDPLCPHCNDGFLEEVENPNPNP 66

Query: 64  SPVP--NPFLSFTSEAFPPFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGG 123
            PVP  NPFL F+    P  S  G  +  FP +  +T++ G I    S+  D   L G  
Sbjct: 67  IPVPIPNPFLGFSD--LPSLSAAGATATAFPPLVFSTAAGGSIDLQNSV--DFPGLFGA- 126

Query: 124 SLRSSSLQDPDGFNPLLFLQNYLQS-----ANVQLVIQNASGEAFHPPSNFNLGDYFFGP 183
                   DPD F+P  FLQNYLQ+      NVQ VI   S E     S  NLGDYF GP
Sbjct: 127 --------DPDAFHPFAFLQNYLQTLRAGGTNVQFVIDGNSPEGTFRLSP-NLGDYFIGP 186

Query: 184 GLEQLIQQLAENDPNRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCKDTFELNEVA 243
           GLEQLIQQLAENDPNRYGTPPASKSAIE LP I+IT ELL +DSSQCAVCKD+FEL+E A
Sbjct: 187 GLEQLIQQLAENDPNRYGTPPASKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEEA 246

Query: 244 KQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTR--------GSTAPNRSQ 303
           KQMPCKHIYH DCI+PWLELHNSCPVCRYELPTDDPDYE RTR        G+ A   + 
Sbjct: 247 KQMPCKHIYHNDCILPWLELHNSCPVCRYELPTDDPDYEHRTRGGQVNQTGGNAAAVAAA 306

Query: 304 SESQPFGDSATGGEIVGGTDPNSDENSQTQQMAERRVRRIAFPWPFRGFGSAAETSNSGG 363
             +      A GG  V G +P    N QT + A+ R+ RI+FPWPFR FGS AETSNS  
Sbjct: 307 GAASNSASGAAGGAAVSGENP----NPQTPRTAD-RMFRISFPWPFRTFGSPAETSNSNN 366

Query: 364 ------GNSGNSDEPSSRNRGSQS 367
                 GN  N +  S   +G Q+
Sbjct: 367 DGESNPGNRANQESGSENRQGDQT 371

[Close]
BLAST of ClCG01G014860 vs. TrEMBL
Match: A0A103Y8F4_CYNCS (Zinc finger, RING/FYVE/PHD-type OS=Cynara cardunculus var. scolymus GN=Ccrd_017249 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 2.2e-105
Identity = 219/389 (56.30%), Postives = 259/389 (66.58%), Query Frame = 1 

Query: 1   MSSSGGNSGDGAGGGAASHAP-QLYFCYTCNRTVTITPSS--SSDLLCPNCNDSFVEEME 60
           MS    + GDG GGG    AP +LYFCY CN TV+I PS   SS+L CP+C+  F+EE E
Sbjct: 1   MSQGVYSGGDGVGGGNTHGAPPKLYFCYQCNHTVSIRPSPTVSSELFCPDCSGGFLEEYE 60

Query: 61  SPNPNPSPVPNPFLSFTSEA-FPPFSTGGGGSGGFPIIFSTTS-SSGGIGGGGSMMNDLS 120
           +PNP+ S  PNPFL+F  ++ F PFSTG      FP++FSTTS  SG          DLS
Sbjct: 61  NPNPS-STTPNPFLAFDDDSPFTPFSTG------FPLVFSTTSRGSGAASDDFQSPTDLS 120

Query: 121 ALLGGGSLRSSSLQDPDGFNPLLFLQNYLQS-----ANVQLVIQNASG---EAFHPPSNF 180
           AL GG   RS S Q+P  FNP  FLQNYL +     AN+Q VI+N S      FH P+N 
Sbjct: 121 ALFGGPLSRSGSFQNPGEFNPFAFLQNYLSTLRAGGANIQFVIENNSDGDPSGFHLPAN- 180

Query: 181 NLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCK 240
            LGDYF GPGLEQLIQQLAENDPNRYGTPPASKS +  LP IKIT++LL SD S CAVCK
Sbjct: 181 -LGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSVVRNLPSIKITDDLLESDYSDCAVCK 240

Query: 241 DTFELNEVAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRT-RGSTAPNR 300
           D+FEL+E AKQ+PCKH+YH DCIIPWLELHNSCPVCR+ELPTDDP+YE R+  GS A   
Sbjct: 241 DSFELHEEAKQLPCKHVYHQDCIIPWLELHNSCPVCRFELPTDDPEYENRSCEGSVAAGG 300

Query: 301 SQSESQPFGDSATGGEIVGGTDPNSDENSQTQQMAERRVRRIAFPWPFRGFGSAAETSNS 360
            ++     G + +G   V G DP   EN +T    ERR  RI+ PWPF GFG++AETSNS
Sbjct: 301 GRN----MGAARSGAASVSG-DP--QENPETPSNTERRF-RISLPWPFTGFGASAETSNS 360

Query: 361 GGGNSGNSDEPSSRNRGSQSSSEPMQEDL 376
           G GNS      +S +  S S  +  QEDL
Sbjct: 361 GAGNS------NSGHSNSGSGGQDRQEDL 366

[Close]
BLAST of ClCG01G014860 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 289.3 bits (739), Expect = 3.5e-78
Identity = 174/365 (47.67%), Postives = 212/365 (58.08%), Query Frame = 1 

Query: 3   SSGGNSGDGAGGGAASHAPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPNPN 62
           SSG NS   A   AA    +++FCY CN+TVTI+ SSS+D  CP CN  F+EE E PNPN
Sbjct: 2   SSGVNSTGSAA--AAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPN 61

Query: 63  PSPVPNPFLSFTSEAFP---PFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDLSALLG 122
            S   NP  + +   FP   PFST        P+IF    SS     G   M+     L 
Sbjct: 62  QSLNFNP--NSSDSFFPMADPFSTL------LPLIFG---SSAAAPSGMDFMS-----LF 121

Query: 123 GGSLRS---SSLQDP--DGFNPLLFLQNYLQS-----ANVQLVIQN-ASGEAFHPPSNFN 182
           G S++    S+ Q+P  D F+P  FLQN+LQ+      + + VI+N  S      P NF 
Sbjct: 122 GPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNF- 181

Query: 183 LGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCKD 242
            GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI+ALP +K+T+++L S+ +QCAVC D
Sbjct: 182 -GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMD 241

Query: 243 TFELNEVAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSTAPNRSQ 302
            FE     KQMPCKH++H DC++PWLELHNSCPVCR+ELPTDDPDYE R++GS       
Sbjct: 242 EFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENRSQGSQG----- 301

Query: 303 SESQPFGDSATGGEIVGGTDPNSDENSQTQQMAERRVRRIAFPWPFR---GFGSAAETSN 351
                            G    S E  QT + +      I  PWPFR   G GS +    
Sbjct: 302 ----------------SGDGQGSVEGQQTPRFS------IQLPWPFRRQDGSGSGSGAPG 319

[Close]
BLAST of ClCG01G014860 vs. TAIR10
Match: AT5G56340.1 (AT5G56340.1 RING/U-box superfamily protein)

HSP 1 Score: 176.4 bits (446), Expect = 3.3e-44
Identity = 95/218 (43.58%), Postives = 129/218 (59.17%), Query Frame = 1 

Query: 148 NVQLVIQNASGEAFHPPSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALP 207
           N  LV+ +   +  + PS  +LGDYF GPGL+ L+Q LAENDPNR GTPPA K A+EALP
Sbjct: 192 NQSLVVPSDQNQ--NHPSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALP 251

Query: 208 DIKITEELLASDSSQCAVCKDTFELNEVAKQMPCKHIYHADCIIPWLELHNSCPVCRYEL 267
            +KI E L      QC+VC D FE    AK+MPCKH +H  CI+PWLELH+SCPVCR+EL
Sbjct: 252 TVKIMEPL------QCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFEL 311

Query: 268 PTDDPDYEQRTRGSTAPNRSQSESQPFGDSATGGEIVGGTDPNSDENSQTQQMAERRVRR 327
           P+   D ++    S    R+++  +    +    E VG  D   ++     ++     RR
Sbjct: 312 PSSADDDDETKTDSERVLRTRNVRETSNGNVV--ENVGNADRGRED-----EVRSGNGRR 371

Query: 328 IAFPWPFRG-FGSAAETSNSGGGNSGNSDEPSSRNRGS 365
            +FPWPF G F S++ +S+S  G+    +   SR+ GS
Sbjct: 372 FSFPWPFSGLFSSSSSSSSSTSGSQSGENNFFSRSSGS 394

[Close]
BLAST of ClCG01G014860 vs. TAIR10
Match: AT1G55530.1 (AT1G55530.1 RING/U-box superfamily protein)

HSP 1 Score: 170.6 bits (431), Expect = 1.8e-42
Identity = 94/237 (39.66%), Postives = 130/237 (54.85%), Query Frame = 1 

Query: 114 LSALLGGGSLRSSSLQDPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYF 173
           L  +  G S+ S S  +  G NP   +   + ++N  + +QN++     P  +  LGDYF
Sbjct: 125 LQGIRAGLSVESESTGN-GGNNPGRVI--LINTSNQTITVQNSADMDSVPAGS--LGDYF 184

Query: 174 FGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCKDTFELN 233
            GPG E L+Q+LAENDPNRYGTPPA K A+EAL  +KI E L      QC+VC D FE+ 
Sbjct: 185 IGPGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETL------QCSVCLDDFEIG 244

Query: 234 EVAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSTAPNRSQSESQP 293
             AK MPC H +H+DC++PWLELH+SCPVCRY+LP D    E +T   T  + +   S  
Sbjct: 245 TEAKLMPCTHKFHSDCLLPWLELHSSCPVCRYQLPAD----EAKTDSVTTTSDNNGSSSA 304

Query: 294 FGDSATGGEIVGGTDPNSDENSQTQQMAERRVRR----IAFPWPFRGFGSAAETSNS 347
              ++ G E   G     +E  + ++  E          + PWPF    S+++ SN+
Sbjct: 305 SATTSHGAENSDGNRRQEEEEEEEEEEEEENENNDGSGFSIPWPFSTLFSSSQDSNA 346

[Close]
BLAST of ClCG01G014860 vs. TAIR10
Match: AT2G40830.2 (AT2G40830.2 RING-H2 finger C1A)

HSP 1 Score: 164.9 bits (416), Expect = 9.9e-41
Identity = 119/348 (34.20%), Postives = 162/348 (46.55%), Query Frame = 1 

Query: 18  SHAPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPNPNPSPVPNPFLSFTSEA 77
           S +   ++C+ C R V +      + +C  C   FVEE++    +P              
Sbjct: 2   SSSRNTHWCHRCQRAVRL---HGQEPVCFYCGGGFVEELDMAQASP-------------- 61

Query: 78  FPPFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGGGSLRSSSLQD-PDGFNP 137
           F  F +  G      ++    +          M N L+       +R  ++   P+ F  
Sbjct: 62  FDMFRSHRG------VVERDQTFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPG 121

Query: 138 LLFLQNYLQSANVQLVIQNASGEAFHPPS------NFNLGDYFFGPGLEQLIQQLAENDP 197
           L  L  +      +L   NA    F+  S        N GDYFFGPGLE+L +QL+    
Sbjct: 122 LAPLLIFGGQVPYRLTGDNAVEALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTT 181

Query: 198 NRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCKDTFELNEVAKQMPCKHIYHADCI 257
            R G PPA +SAI+ALP IKI +  L S  S C VCKD FEL   AKQMPC HIYH+DCI
Sbjct: 182 RR-GPPPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCI 241

Query: 258 IPWLELHNSCPVCRYELPTDDPDYEQRTRGSTAPNRSQSESQPFGDSATGGEIVGGTDPN 317
           +PWL  HNSCPVCR ELP+           ++ P+ SQ+ + P  +  +       +  N
Sbjct: 242 VPWLVQHNSCPVCRQELPS-----------ASGPSSSQNRTTPTRNYRSSS---SSSSSN 301

Query: 318 SDENSQTQQMAERRVRRIAFPWPFRGFGSAAETSNSGGG--NSGNSDE 357
           S EN       ERR    +F WPFR  GS++ ++ + GG  NS  SDE
Sbjct: 302 SRENGN-----ERRNPFSSF-WPFRSSGSSSSSTQNRGGTRNSDTSDE 305

[Close]
BLAST of ClCG01G014860 vs. TAIR10
Match: AT3G56580.2 (AT3G56580.2 RING/U-box superfamily protein)

HSP 1 Score: 163.7 bits (413), Expect = 2.2e-40
Identity = 117/351 (33.33%), Postives = 154/351 (43.87%), Query Frame = 1 

Query: 24  YFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEME-SPNPNPSPVPNPFLSFTSEAFPPFS 83
           ++C+ C R V +    + D +C  C   FVEE++  P+     V         EAF  F 
Sbjct: 8   HWCHRCQRAVWLR---ARDAVCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFM 67

Query: 84  TGGGGSGGFPIIFSTTSSSGGIGGGGS-MMNDLSALLGGGSLRSSSLQDPDGFNPLLFLQ 143
                   +         SG +G  GS   ++L+ LL  G      L   D  +   F+ 
Sbjct: 68  RSRLAERSYD-----REISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAFV- 127

Query: 144 NYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLEQLIQQLAENDPNRYGTPPASKS 203
                        N +          N GDYFFGPGLE+LI+QL+    +R G PPA KS
Sbjct: 128 -------------NGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHR-GPPPAPKS 187

Query: 204 AIEALPDIKITEELLASDSSQCAVCKDTFELNEVAKQMPCKHIYHADCIIPWLELHNSCP 263
           +I+ALP IKIT++ L S  S C VCKD FEL   AKQMPC HIYH+DCI+PWL  HNSCP
Sbjct: 188 SIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCP 247

Query: 264 VCRYELPTDDPDYEQRTRGSTAPNRSQSESQPFGDSATGGEIVGGTDPNSDENSQTQQMA 323
           VCR ELP         +RGS++  +S                      N  ENS      
Sbjct: 248 VCRKELP---------SRGSSSSTQSSQ----------------NRSTNGRENS------ 303

Query: 324 ERRVRRIAFPWPFRGFGSAAETSNSGGGNSGNSDEPSSRNRGSQSSSEPMQ 373
            RR    +  WPFR   S++  +     N+  ++E    +   Q      Q
Sbjct: 308 -RRRNIFSNLWPFRSSSSSSTQNRRDTNNTATAEEGHYHHHQQQQQQHQHQ 303

[Close]
BLAST of ClCG01G014860 vs. NCBI nr
Match: gi|659066950|ref|XP_008467256.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 742.3 bits (1915), Expect = 4.3e-211
Identity = 359/377 (95.23%), Postives = 368/377 (97.61%), Query Frame = 1 

Query: 1   MSSSGGNSGDGAGGGAASHAPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60
           MSSSGGNSGDGAGGGA S+ PQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN
Sbjct: 1   MSSSGGNSGDGAGGGAVSYPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           PNPSPVPNPFLSFTSEAFPPFSTGGGG+GGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG
Sbjct: 61  PNPSPVPNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120

Query: 121 GSLRSSSLQDPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLEQ 180
           GSLRSSSLQ+PDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLEQ
Sbjct: 121 GSLRSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLEQ 180

Query: 181 LIQQLAENDPNRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCKDTFELNEVAKQMP 240
           LIQQLAENDPNRYGTPPASKSAIE LPDIKITEELLA+DSSQCAVCKDTFEL+EVAK MP
Sbjct: 181 LIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLMP 240

Query: 241 CKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSTAPNRSQSESQPFGDSATG 300
           CKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTR S+APNRSQSESQPFGDS+TG
Sbjct: 241 CKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRASSAPNRSQSESQPFGDSSTG 300

Query: 301 GEIVGGTDPNSDENSQTQQMAERRVRRIAFPWPFRGFGSAAETSNSGGG-NSGNSDEPSS 360
           GE V G+DPNSDENSQTQQM ERRVRRIAFPWPFRGFGSAAETSNSGGG NSGN+DEPSS
Sbjct: 301 GENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPSS 360

Query: 361 RNRGSQSSSEPMQEDLD 377
           RNRGSQSSSEPMQEDLD
Sbjct: 361 RNRGSQSSSEPMQEDLD 377

[Close]
BLAST of ClCG01G014860 vs. NCBI nr
Match: gi|449439501|ref|XP_004137524.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus])

HSP 1 Score: 737.6 bits (1903), Expect = 1.0e-209
Identity = 359/378 (94.97%), Postives = 367/378 (97.09%), Query Frame = 1 

Query: 1   MSSSGGNSGDGAGGGAASHAPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60
           MSSSGGNSGDGAGGG ASH PQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN
Sbjct: 1   MSSSGGNSGDGAGGGVASHPPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           PNPSPV NPFLSFTSEAFPPFSTGGGG+GGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG
Sbjct: 61  PNPSPVSNPFLSFTSEAFPPFSTGGGGNGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120

Query: 121 GSLRS-SSLQDPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE 180
           GSLRS SSLQ+PDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE
Sbjct: 121 GSLRSSSSLQNPDGFNPLLFLQNYLQSANVQLVIQNASGEAFHPPSNFNLGDYFFGPGLE 180

Query: 181 QLIQQLAENDPNRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCKDTFELNEVAKQM 240
           QLIQQLAENDPNRYGTPPASKSAIE LPDIKITEELLA+DSSQCAVCKDTFEL+EVAK M
Sbjct: 181 QLIQQLAENDPNRYGTPPASKSAIEGLPDIKITEELLATDSSQCAVCKDTFELDEVAKLM 240

Query: 241 PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSTAPNRSQSESQPFGDSAT 300
           PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGS+APNRSQSESQPFGDS+T
Sbjct: 241 PCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSSAPNRSQSESQPFGDSST 300

Query: 301 GGEIVGGTDPNSDENSQTQQMAERRVRRIAFPWPFRGFGSAAETSNSGGG-NSGNSDEPS 360
           GGE V G+DPNSDENSQTQQM ERRVRRIAFPWPFRGFGSAAETSNSGGG NSGN+DEPS
Sbjct: 301 GGENVVGSDPNSDENSQTQQMGERRVRRIAFPWPFRGFGSAAETSNSGGGNNSGNNDEPS 360

Query: 361 SRNRGSQSSSEPMQEDLD 377
           SRNRGSQ SSEPMQEDLD
Sbjct: 361 SRNRGSQGSSEPMQEDLD 378

[Close]
BLAST of ClCG01G014860 vs. NCBI nr
Match: gi|703069031|ref|XP_010088395.1| (E3 ubiquitin-protein ligase RING1 [Morus notabilis])

HSP 1 Score: 458.8 bits (1179), Expect = 9.4e-126
Identity = 242/390 (62.05%), Postives = 283/390 (72.56%), Query Frame = 1 

Query: 1   MSSSGGNSGDGAGGGAASHAPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60
           MSSSGGNSG   GGG    APQ YFC+ CNRTV+ITPS +SDL+CP C   F+EE+++PN
Sbjct: 1   MSSSGGNSG---GGGIGISAPQPYFCHQCNRTVSITPSPTSDLVCPVCGGGFLEEVQNPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           P+P P PN F SF+S+          G+ GFP++F+TTSSSG   GGG++++DL AL GG
Sbjct: 61  PSPEPSPNSFFSFSSD------DSSFGARGFPLLFTTTSSSGH--GGGALVDDLPALFGG 120

Query: 121 GSLRSSSLQDPDGFNPLLFLQNYLQS-----ANVQLVIQNASGE--AFHPPSNFNLGDYF 180
              R S  +D D FNP  FLQNYLQ+     ANVQ VI    G+   F  P+N NLGDYF
Sbjct: 121 PLTRVSQSEDTDAFNPFAFLQNYLQTLRATGANVQFVIDGNPGDPAGFRVPTNLNLGDYF 180

Query: 181 FGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCKDTFELN 240
           FGPGLEQLIQQLAENDPNRYGTPPASKSA+E LP +KITEELLASDSSQCAVCKDTFEL 
Sbjct: 181 FGPGLEQLIQQLAENDPNRYGTPPASKSAMEGLPSVKITEELLASDSSQCAVCKDTFELG 240

Query: 241 EVAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSTAPNRSQSESQP 300
           E AKQMPCKHIYH++CI+PWLELHNSCPVCRYELPTDDPDYEQR RG++ P      +  
Sbjct: 241 EEAKQMPCKHIYHSECILPWLELHNSCPVCRYELPTDDPDYEQRNRGTSTPANQSQAAGG 300

Query: 301 FGDSATGGEI--VG---GTDPNSDENSQTQQMAERRVRRIAFPWPFRGFGSAAETSNSG- 360
           F  S  GG I  VG   G+   S EN QT +M ERR   I+ P  FR FGS AETSN+G 
Sbjct: 301 FNISVGGGSINAVGDGSGSGATSGENPQTPRMVERRF-TISLPQLFRVFGSTAETSNTGS 360

Query: 361 GGNSGNSDEPSSRNRGSQSS-SEPMQEDLD 377
           G N+GN++  +S NRG+QS+ SEP  EDLD
Sbjct: 361 GNNNGNNEGSNSENRGNQSTGSEPRHEDLD 378

[Close]
BLAST of ClCG01G014860 vs. NCBI nr
Match: gi|1009133460|ref|XP_015883912.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba])

HSP 1 Score: 426.8 bits (1096), Expect = 4.0e-116
Identity = 233/388 (60.05%), Postives = 271/388 (69.85%), Query Frame = 1 

Query: 1   MSSSGGN-SGDGAGGGAASHAPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESP 60
           MSSSGG+  G G  G A + +PQLYFC+ C+RTVT+TPS ++DLLCP CN  FVEE+ +P
Sbjct: 1   MSSSGGSLGGAGVAGTAGAGSPQLYFCHVCDRTVTLTPSPTTDLLCPVCNGGFVEELGTP 60

Query: 61  NPNPSPVPNPFLSFTSEAFPPFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDLSALLG 120
              P+P PN FL F+ E+ P       G+ GFP +FST +SSG   G  ++++DLSAL G
Sbjct: 61  ---PNPNPNTFLPFSHES-PSL-----GAAGFPFLFSTAASSGPTSGPATVVDDLSALFG 120

Query: 121 GGSLRSSSL--QDPDGFNPLLFLQNYLQS-----ANVQLVIQNA-SGE--AFHPPSNFNL 180
            G  R+  L  QDPD FNP LFLQNYLQ+     ANVQ VI +  SG+   F  PSN NL
Sbjct: 121 AGPTRNQHLTFQDPDAFNPFLFLQNYLQTLRANGANVQFVIDSGGSGDPAGFRVPSNLNL 180

Query: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCKDT 240
           GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI+ LP +KI+EELLASDSSQCAVCKDT
Sbjct: 181 GDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIQGLPVVKISEELLASDSSQCAVCKDT 240

Query: 241 FELNEVAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSTAPNRSQS 300
           FEL E AKQMPCKHIYH+DCI+PWLELHNSCPVCRYELPTDDPDYEQRTR  +       
Sbjct: 241 FELGEEAKQMPCKHIYHSDCIVPWLELHNSCPVCRYELPTDDPDYEQRTREGSGVGNQSR 300

Query: 301 ESQPFGDSATGGEIVGGTDPNSDENSQTQQMAERRVRRIAFPWPFRGFGSAAETSNSGGG 360
               F  S+ G +   GT   S EN  T      R  R++ P  FR FGS AETSNSG G
Sbjct: 301 TGGGFNASSGGNDGGTGTGAASGENPPTP-----RSFRVSLPRLFRVFGSPAETSNSGSG 360

Query: 361 NSGNSDEPSSRNRGSQSSS-EPMQEDLD 377
           N  N    ++ NRG+ +S  EP QEDLD
Sbjct: 361 N--NDGATNTGNRGNPNSGPEPRQEDLD 372

[Close]
BLAST of ClCG01G014860 vs. NCBI nr
Match: gi|658022966|ref|XP_008346897.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Malus domestica])

HSP 1 Score: 420.6 bits (1080), Expect = 2.8e-114
Identity = 230/396 (58.08%), Postives = 272/396 (68.69%), Query Frame = 1 

Query: 1   MSSSGGNSGDGAGGGAASHAPQLYFCYTCNRTVTITPSSSSDLLCPNCNDSFVEEMESPN 60
           MSSSGG+SG   G      APQLYFC+ C+RTV++TPS +SDL+CP C+  F+EEME+PN
Sbjct: 1   MSSSGGHSGSVGG----PIAPQLYFCHECDRTVSLTPSPTSDLVCPLCSGGFLEEMETPN 60

Query: 61  PNPSPVPNPFLSFTSEAFPPFSTGGGGSGGFPIIFSTTSSSGGIGGGGSMMNDLSALLGG 120
           P+P P PNPF SF S   PPF+     S GFP++FS+ S+ G   G  ++ +DLSAL GG
Sbjct: 61  PSPFP-PNPFFSFPSSDAPPFA-----SSGFPLLFSS-SAPGPAPGPANIADDLSALFGG 120

Query: 121 GSLRSSSLQDPDGFNPLLFLQNYLQS-----ANVQLVIQNASG-----EAFHPPSNFNLG 180
              RSS   DPD FNP +FLQNYLQ+     ANVQ VI +  G       F  P+N NLG
Sbjct: 121 APQRSSPFHDPDAFNPFVFLQNYLQTLRANGANVQFVIDSTPGGGGDPSGFRAPTNLNLG 180

Query: 181 DYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPDIKITEELLASDSSQCAVCKDTF 240
           DYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEAL  +KI+EELLASDSSQCAVCKD+F
Sbjct: 181 DYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIEALLVVKISEELLASDSSQCAVCKDSF 240

Query: 241 ELNEVAKQMPCKHIYHADCIIPWLELHNSCPVCRYELPTDDPDYEQRTRGSTAPNRSQSE 300
           EL E AKQMPCKHIYH+DCI+PWLELHN+CPVCR+ELPTDD +YEQR RG +      S+
Sbjct: 241 ELGEEAKQMPCKHIYHSDCILPWLELHNTCPVCRHELPTDDSEYEQRIRGESGNGNQTSQ 300

Query: 301 SQPFGD---SATGGEIVGGTD-----PNSDENSQTQQMAERRVRRIAFPWPFRGFGSAAE 360
           S   G    S  GG    G       P+ D  S + +  ERR   I+ P  FR  G  AE
Sbjct: 301 SGALGGANISVGGGGSSSGFGFGIGAPSPDNQSPSPRTVERRF-TISLPRFFRQLGGTAE 360

Query: 361 TSNSGGGNSGNSDEPSSRNRG--SQSSSEPMQEDLD 377
           TSN+G   SGN++E +S NRG  +  S EP QEDLD
Sbjct: 361 TSNTG---SGNNEESNSGNRGRHNSGSEEPRQEDLD 381

The following BLAST results are available for this feature:
BLAST of ClCG01G014860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RNG1L_ARATH6.2e-7747.67E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
RING1_GOSHI4.4e-7546.57E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1[more]
RHC1A_ARATH1.8e-3934.20Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana GN=RHC1A PE=2... [more]
RHC2A_ARATH8.7e-3134.83Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana GN=RHC2A PE=2... [more]
RDUF1_ARATH4.3e-3031.52E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana GN=RDUF1 PE=1 SV=1[more]
BLAST of ClCG01G014860 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTV3_CUCSA7.3e-21094.97Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043100 PE=4 SV=1[more]
W9T1E8_9ROSA6.6e-12662.05E3 ubiquitin-protein ligase RING1 OS=Morus notabilis GN=L484_000879 PE=4 SV=1[more]
F6HVS8_VITVI2.6e-10657.78Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0053g00320 PE=4 SV=... [more]
A5C2A6_VITVI4.4e-10655.99Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042386 PE=4 SV=1[more]
A0A103Y8F4_CYNCS2.2e-10556.30Zinc finger, RING/FYVE/PHD-type OS=Cynara cardunculus var. scolymus GN=Ccrd_0172... [more]
BLAST of ClCG01G014860 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19950.13.5e-7847.67 RING/U-box superfamily protein[more]
AT5G56340.13.3e-4443.58 RING/U-box superfamily protein[more]
AT1G55530.11.8e-4239.66 RING/U-box superfamily protein[more]
AT2G40830.29.9e-4134.20 RING-H2 finger C1A[more]
AT3G56580.22.2e-4033.33 RING/U-box superfamily protein[more]
BLAST of ClCG01G014860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659066950|ref|XP_008467256.1|4.3e-21195.23PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo][more]
gi|449439501|ref|XP_004137524.1|1.0e-20994.97PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus][more]
gi|703069031|ref|XP_010088395.1|9.4e-12662.05E3 ubiquitin-protein ligase RING1 [Morus notabilis][more]
gi|1009133460|ref|XP_015883912.1|4.0e-11660.05PREDICTED: E3 ubiquitin-protein ligase RING1-like [Ziziphus jujuba][more]
gi|658022966|ref|XP_008346897.1|2.8e-11458.08PREDICTED: E3 ubiquitin-protein ligase RING1-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0019083 viral transcription
cellular_component GO:0005575 cellular_component
cellular_component GO:0031379 RNA-directed RNA polymerase complex
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0003968 RNA-directed RNA polymerase activity
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G014860.1ClCG01G014860.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 222..264
score: 3.6
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 223..263
score: 2.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 223..264
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 219..267
score: 5.4
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 16..375
score: 3.7E
NoneNo IPR availablePANTHERPTHR22763:SF5E3 UBIQUITIN-PROTEIN LIGASE CIP8coord: 16..375
score: 3.7E
NoneNo IPR availablePFAMPF14369zinc_ribbon_9coord: 22..56
score: 2.0
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 205..271
score: 2.22