Cp4.1LG18g02350 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG18g02350
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAcyl carrier protein
LocationCp4.1LG18 : 3991042 .. 3994045 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTCCCAAATACAAATAGGTTTTTTTTTTTTCCAACGAGCATCCATTTCTCAGAACTCTCGAAAGTTCATTTCTTTCACTTCCCATGGCGGCCAGAAACTCTCTGCTGAAGCATCTTAGGGTTCATGTTCAGGCCCTGCCTAAAACCAACAGCCCCATTTTCTACGTCAACCCTTTCAATGCGATTCGACGCCGTCTCTTTTCCGAGGAGGTTAGGGGTTCTTTTCTCGACAAATCGGAAGTCACCGACCGCGTCATTTCCGTTGTCAAGAAGTTTCAGAAAGTCGATCCTTCTAAGGTACGAGAAATGTTCTATTCCTTTTAGGATTTCTCTAATTTATTGTGTCTGATTGCAAATTAAATAATTTATTGAGTTTCTGCGAGCTTGGTTTTGTGTTTGCAGTGGTTCCAATTATGTTATTAGCTAAGAAATTTAGGGTTGATTTGGCTGGAAATATTAAGACAAGATGTAAAAACNTTATAAGAGGGATGTATAATCCATGATGTTTACAAAAGACCTTCCCAATTTGCAATGAGGGAGGTATAACTATAGGAAGTAAAAATATTACACAGTTTACACCAAGATATAGCTTGGTAAACAACATTGTCGAAAAGTTTTGTGTAGGTCTGTGTCGTTTCTGCAAATATTCTCTGATTTCTTTCTTTTCACAGATTCCAAAAGAAAGCCATGATGAGGTTTTTCCATAATAGGGCTTTTGCGTTCTTGAAAGGGTGGTCGTACGTTAAGGCCGTATCCAAAAAATCCTTTACCTCCCTAGGAAATGTGAGATGTCATCCGAATATATTAAGAATCGTTGTCCAGAAATTTTGAGTGTATGTGCATTGCATAAACAAGTGACTTTGTGATTCGTTTGCTTTCTTGCAAAGTGGACACCAATTTGGAGAGAGAGTGATGTATTTGCAAATTTGATCGGTAGCGAATTAGAAATGTATCGTATATCTATGTTTTATTAATGTACTAAGAAAAAGTTTAGGATAGGATACATAATTCAATAGAAATCTTCTTGAATCCTTCAAAAAACATCTTCTACTTCCAGGTACTAGGAAAAAAAATCATTCCACAATTGCATTCTTGGGGACCAAACAGTATAGCAATTATTTGGATCATACTTTCAGTATATACAATTTGTGTCCTCTATTATATACTTTTCTAGTTATTGGCCTCTCTTTTATAGATCAGAAAAGGTTTTTCCTCCTATTGAATTTGCCCCCTCTACTTTTCTAGACTGAAATGTACACTCACTATGTTTTTCCCCCTTAATTTGTTCCATCTTTTGCTCGAACTCATGCTTTTGGCATCTCTTAAGATTACTAATGTTCTTATGTTATTATAAAACTCATCACTCTAATTTGTTTTTTCAAAATTGATTTGTTTTTCCCCCTTAATTTGTTCCATCTTTTGCTCAAACTCATGCTTTTGGTATCTCGTAAGATTACTAATGTTCTTATGTTATTATAAAACTCATCACTCTAATTTGTTTTTTCAAAATTGATTTGTCTTTCCCCCTTAATTTGTTCCATCTTTTGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTCTTTTCAGATTTTCTTTTAATTTGTAACTTTAAATTTACATTTTGATTCAATAAATAGTGTCTAAAGCTTAGATATTCTATGGATAAGTGTTCTTCTTCCTATGTAATTTTAAATATTGGTTTATGTATTTAAGTGTGCCATTGTCACCTTAGAGAGTGTTTTGCCTGTTTCTTTTGAGATAGGCCCTTGCCTTTGCGGGGGGGACTGCAAATCATATTAAGCTGTTGTCACATTAGAGCTATAGGCCCTTGCCTTTGCCTAATTCCATTTCTTTGAACGATGCTTTTGTTCCTAATATCGAACTGTAATATGTTGTTCTTGTTTCGGGAAGGCTCAGATTGAGACTCTTTTACAAGCTTTTTTTTTTTTTTACATAACTAGTAAGTGACCTCACTACCTATTAAGACAAGATCTCTCCTGTTGAATTTTCCCTTTAATCTTCATGGTCCTTGACTCCTTGGTGAACCAACACCCCCCAGTGAATGAATGGAAGTTTTATGGTATCTTAACTCGTGCGATCGATCCATTTTTTTGCCATCTTTCTTTCACTGATTGATAATTGGTATTATTAATTATCCGGCAGGTTACTCCAACAGCCCATTTCCAAAATGATCTAGGCTTGGATAGCTTAGATACTGTGGAGGTTGTGATGGCTCTTGAAGAAGAGTTCCGGTTTGAAATTCCCGACAACGAAGCAGACAAAATCAATGCTATCAACCTTGCAGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAGACGAAAGCCATACATGCTTTCACTCAGGTTCCTCCTATTTCGATGATAAAATTAGATACTGTTAGATGTCTCTTATTTGTCTCTCTGTATTTTGTTGGTGGTTTTCCATTTGTTATCCTAATTCTTATTGAAGAGAATGATACTTGGTTGAGCCAGCTTCAAGCTGCATGAGTTGAGGCAGACTGTTATTGGCTATACCAAACCTGCATGAGTTGATGCAGACTGTTATTGGGTTTAATGAATCAACTGAGTTTATGTTTCAATAATGATTTTATGAGCTTTTCCACGAACTTGTGAACTAGTTGAACATAACCCAACTAGGTAAGTCGTGCCTTCGATCTAGAGGTCATACGTCCAAATTCTCTCCTTGTTTTTTTAACTTTGCAAAAACGTGGA

mRNA sequence

TNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTCCCAAATACAAATAGGTTTTTTTTTTTTCCAACGAGCATCCATTTCTCAGAACTCTCGAAAGTTCATTTCTTTCACTTCCCATGGCGGCCAGAAACTCTCTGCTGAAGCATCTTAGGGTTCATGTTCAGGCCCTGCCTAAAACCAACAGCCCCATTTTCTACGTCAACCCTTTCAATGCGATTCGACGCCGTCTCTTTTCCGAGGAGGTTAGGGGTTCTTTTCTCGACAAATCGGAAGTCACCGACCGCGTCATTTCCGTTGTCAAGAAGTTTCAGAAAGTCGATCCTTCTAAGGTTACTCCAACAGCCCATTTCCAAAATGATCTAGGCTTGGATAGCTTAGATACTGTGGAGGTTGTGATGGCTCTTGAAGAAGAGTTCCGGTTTGAAATTCCCGACAACGAAGCAGACAAAATCAATGCTATCAACCTTGCAGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAGACGAAAGCCATACATGCTTTCACTCAGGTTCCTCCTATTTCGATGATAAAATTAGATACTGTTAGATGTCTCTTATTTGTCTCTCTGTATTTTGTTGGTGGTTTTCCATTTGTTATCCTAATTCTTATTGAAGAGAATGATACTTGGTTGAGCCAGCTTCAAGCTGCATGAGTTGAGGCAGACTGTTATTGGCTATACCAAACCTGCATGAGTTGATGCAGACTGTTATTGGGTTTAATGAATCAACTGAGTTTATGTTTCAATAATGATTTTATGAGCTTTTCCACGAACTTGTGAACTAGTTGAACATAACCCAACTAGGTAAGTCGTGCCTTCGATCTAGAGGTCATACGTCCAAATTCTCTCCTTGTTTTTTTAACTTTGCAAAAACGTGGA

Coding sequence (CDS)

ATGGCGGCCAGAAACTCTCTGCTGAAGCATCTTAGGGTTCATGTTCAGGCCCTGCCTAAAACCAACAGCCCCATTTTCTACGTCAACCCTTTCAATGCGATTCGACGCCGTCTCTTTTCCGAGGAGGTTAGGGGTTCTTTTCTCGACAAATCGGAAGTCACCGACCGCGTCATTTCCGTTGTCAAGAAGTTTCAGAAAGTCGATCCTTCTAAGGTTACTCCAACAGCCCATTTCCAAAATGATCTAGGCTTGGATAGCTTAGATACTGTGGAGGTTGTGATGGCTCTTGAAGAAGAGTTCCGGTTTGAAATTCCCGACAACGAAGCAGACAAAATCAATGCTATCAACCTTGCAGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAG

Protein sequence

MAARNSLLKHLRVHVQALPKTNSPIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVISVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASHPQAK
Homology
[Close]
BLAST of Cp4.1LG18g02350 vs. Swiss-Prot
Match: ACPM2_ARATH (Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.6e-45
Identity = 98/129 (75.97%), Postives = 111/129 (86.05%), Query Frame = 1 

Query: 1   MAARNSLLKHLRVHVQALPKTNSPIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVISV 60
           MAAR ++L++LRV+V   P   +P   V PF+ + RR FSEEVRGSFLDKSEVTDRV+SV
Sbjct: 1   MAARGAMLRYLRVNVN--PTIQNPRECVLPFSILLRR-FSEEVRGSFLDKSEVTDRVLSV 60

Query: 61  VKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVD 120
           VK FQKVDPSKVTP A+FQNDLGLDSLD+VEVVMALEEEF FEIPDNEADKI +I+LAVD
Sbjct: 61  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 120

Query: 121 FIASHPQAK 130
           FIASHPQAK
Sbjct: 121 FIASHPQAK 126

[Close]
BLAST of Cp4.1LG18g02350 vs. Swiss-Prot
Match: ACPM1_ARATH (Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-30
Identity = 70/128 (54.69%), Postives = 89/128 (69.53%), Query Frame = 1 

Query: 1   MAARNSLLKHLRVHVQALPKTNSPIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVISV 60
           MA RN++L+HLRV VQ L    S I ++        R FS       L +  V DRV+ V
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIGFLGTI-----RSFSSH--DDHLSREAVVDRVLDV 60

Query: 61  VKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVD 120
           VK F KVDPSKVTP  HFQNDLGLDSLDTVE+VMA+EEEF+ EIPD EADKI++ +LA++
Sbjct: 61  VKSFPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIE 120

Query: 121 FIASHPQA 129
           ++ +HP +
Sbjct: 121 YVYNHPMS 121

[Close]
BLAST of Cp4.1LG18g02350 vs. Swiss-Prot
Match: ACPM_NEUCR (Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-12 PE=1 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 3.7e-21
Identity = 60/115 (52.17%), Postives = 75/115 (65.22%), Query Frame = 1 

Query: 15  VQALPKTNSPIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVISVVKKFQKV-DPSKVT 74
           VQA+PK       V  F A+R   +S    G  L K EV  R+  V+  F KV DP  +T
Sbjct: 31  VQAVPK-------VAAFQAVR--FYSA---GGHLKKDEVFSRIAQVLSGFDKVNDPKNIT 90

Query: 75  PTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIASHPQA 129
            TAHF NDLGLDSLDTVEVVMA+EEEF  EIPD +AD+I++++ AV++I S P A
Sbjct: 91  ETAHFANDLGLDSLDTVEVVMAIEEEFSIEIPDKDADQIHSVDKAVEYILSQPDA 133

[Close]
BLAST of Cp4.1LG18g02350 vs. Swiss-Prot
Match: ACPM_SCHPO (Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4H3.09 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.5e-18
Identity = 43/81 (53.09%), Postives = 59/81 (72.84%), Query Frame = 1 

Query: 50  KSEVTDRVISVVKKFQKV-DPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNE 109
           + +   R++ VV  F K+ DP KVTPT+ F NDLGLDSLD VEVVMA+EEEF  +IPD +
Sbjct: 32  RPDAEKRILKVVSSFDKIQDPKKVTPTSTFANDLGLDSLDAVEVVMAIEEEFSIQIPDKD 91

Query: 110 ADKINAINLAVDFIASHPQAK 130
           AD+I ++  A+ +I  +P+AK
Sbjct: 92  ADEITSVGDAISYITKNPEAK 112

[Close]
BLAST of Cp4.1LG18g02350 vs. Swiss-Prot
Match: ACPM3_ARATH (Acyl carrier protein 3, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-16
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 1 

Query: 4   RNSLLKHLRVHVQALPKTNSPIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVISVVKK 63
           R+S+L+HLR+ V   P   S +   N F +I    F+ E       + ++  RVI +VKK
Sbjct: 5   RSSILQHLRLRVSVRP--TSLLQNENGFKSIGIFNFTSEAAADG-GQDQILSRVIELVKK 64

Query: 64  FQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIA 123
           + K + S+VT  A FQ DL LDSLD  E+VMA+EEEF  EIPD +ADK+        +I 
Sbjct: 65  YDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATYIL 124

Query: 124 SHPQAK 130
           S    K
Sbjct: 125 SETPTK 127

[Close]
BLAST of Cp4.1LG18g02350 vs. TrEMBL
Match: M5W1T8_PRUPE (Acyl carrier protein OS=Prunus persica GN=PRUPE_ppa013239mg PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 8.4e-49
Identity = 105/131 (80.15%), Postives = 117/131 (89.31%), Query Frame = 1 

Query: 2   AARNSLLKHLRVHVQALPKTNS---PIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVI 61
           AAR+++LK+LRV V A+P   S   P+F ++PFNAIRRRLFSEEVRG+FLDKSEVTDRVI
Sbjct: 4   AARSAILKYLRVPVPAVPSNPSSTTPLF-LSPFNAIRRRLFSEEVRGTFLDKSEVTDRVI 63

Query: 62  SVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLA 121
           SVVK FQKVDPSKVTP AHFQNDLGLDSLD VE+VMALEEEF FEIPDNEADKIN+I LA
Sbjct: 64  SVVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFGFEIPDNEADKINSIGLA 123

Query: 122 VDFIASHPQAK 130
           VDFI+SHPQAK
Sbjct: 124 VDFISSHPQAK 133

[Close]
BLAST of Cp4.1LG18g02350 vs. TrEMBL
Match: W9RQC9_9ROSA (Acyl carrier protein OS=Morus notabilis GN=L484_005582 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.9e-48
Identity = 104/131 (79.39%), Postives = 115/131 (87.79%), Query Frame = 1 

Query: 1   MAARNSLLKHLRVHVQALPKTNSPI--FYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVI 60
           MAAR  LLKHLRV VQA+P+  S      ++ F+A+RRR FSEEVRGSFLDKSEVTDRVI
Sbjct: 1   MAARGLLLKHLRVQVQAVPQNPSSTGSLLLSSFHALRRRFFSEEVRGSFLDKSEVTDRVI 60

Query: 61  SVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLA 120
           SVVK FQKVDP+KVTP AHFQNDLGLDSLD VE+VMALEEEFRFEIPDNEADKI++I+LA
Sbjct: 61  SVVKNFQKVDPAKVTPIAHFQNDLGLDSLDAVELVMALEEEFRFEIPDNEADKISSISLA 120

Query: 121 VDFIASHPQAK 130
           VDFIASHPQAK
Sbjct: 121 VDFIASHPQAK 131

[Close]
BLAST of Cp4.1LG18g02350 vs. TrEMBL
Match: E6Y2N3_TRISB (Acyl carrier protein OS=Triadica sebifera GN=acp PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 6.1e-47
Identity = 106/132 (80.30%), Postives = 117/132 (88.64%), Query Frame = 1 

Query: 1   MAARNSLLKHLRVHVQAL---PKTNSPIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRV 60
           MAAR +LLK+LR++VQ +   P+ NS +F ++ FN+I RR FSEEVRGSFLDKSEVTDRV
Sbjct: 1   MAARGALLKYLRINVQTVSQSPRPNSGLFALS-FNSIVRR-FSEEVRGSFLDKSEVTDRV 60

Query: 61  ISVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINL 120
           ISVVK FQKVDPSKVTP AHFQNDLGL SLDTVEVVMALEEEF FEIPDNEADKIN+INL
Sbjct: 61  ISVVKNFQKVDPSKVTPNAHFQNDLGLGSLDTVEVVMALEEEFGFEIPDNEADKINSINL 120

Query: 121 AVDFIASHPQAK 130
           AVDFIASHPQAK
Sbjct: 121 AVDFIASHPQAK 130

[Close]
BLAST of Cp4.1LG18g02350 vs. TrEMBL
Match: B9IQ34_POPTR (Acyl carrier protein OS=Populus trichocarpa GN=POPTR_0019s08300g PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.3e-46
Identity = 101/132 (76.52%), Postives = 116/132 (87.88%), Query Frame = 1 

Query: 1   MAARNSLLKHLRVHVQALPKTNSPI---FYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRV 60
           MAAR +LLK+LRV VQA+P T +P         FN+IRRR FSEEVRG+FLDKSEVTDRV
Sbjct: 1   MAARGALLKYLRVKVQAMPTTRNPNNNGLVGLSFNSIRRR-FSEEVRGTFLDKSEVTDRV 60

Query: 61  ISVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINL 120
           ++VVK FQKVDPSKVTP AHFQNDLGLDSLD+VE+VMALEEEF+FEIPDNEADKIN+I+L
Sbjct: 61  VNVVKNFQKVDPSKVTPDAHFQNDLGLDSLDSVEIVMALEEEFQFEIPDNEADKINSISL 120

Query: 121 AVDFIASHPQAK 130
           A+DFI+SHPQAK
Sbjct: 121 AIDFISSHPQAK 131

[Close]
BLAST of Cp4.1LG18g02350 vs. TrEMBL
Match: A9PBC4_POPTR (Acyl carrier protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.1e-46
Identity = 100/132 (75.76%), Postives = 115/132 (87.12%), Query Frame = 1 

Query: 1   MAARNSLLKHLRVHVQALPKTNSPI---FYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRV 60
           MAAR +LLK+LRV VQA+P T +P         FN+IRRR FSEEVRG+FLDKSEVTDRV
Sbjct: 1   MAARGALLKYLRVKVQAMPTTRNPNNNGLVGLSFNSIRRR-FSEEVRGTFLDKSEVTDRV 60

Query: 61  ISVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINL 120
           ++VVK FQKVDPSKVTP AHFQNDLGLDSLD+VE+VMALEEEF+FEIPDNEAD IN+I+L
Sbjct: 61  VNVVKNFQKVDPSKVTPDAHFQNDLGLDSLDSVEIVMALEEEFQFEIPDNEADNINSISL 120

Query: 121 AVDFIASHPQAK 130
           A+DFI+SHPQAK
Sbjct: 121 AIDFISSHPQAK 131

[Close]
BLAST of Cp4.1LG18g02350 vs. TAIR10
Match: AT1G65290.1 (AT1G65290.1 mitochondrial acyl carrier protein 2)

HSP 1 Score: 182.2 bits (461), Expect = 2.1e-46
Identity = 98/129 (75.97%), Postives = 111/129 (86.05%), Query Frame = 1 

Query: 1   MAARNSLLKHLRVHVQALPKTNSPIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVISV 60
           MAAR ++L++LRV+V   P   +P   V PF+ + RR FSEEVRGSFLDKSEVTDRV+SV
Sbjct: 1   MAARGAMLRYLRVNVN--PTIQNPRECVLPFSILLRR-FSEEVRGSFLDKSEVTDRVLSV 60

Query: 61  VKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVD 120
           VK FQKVDPSKVTP A+FQNDLGLDSLD+VEVVMALEEEF FEIPDNEADKI +I+LAVD
Sbjct: 61  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 120

Query: 121 FIASHPQAK 130
           FIASHPQAK
Sbjct: 121 FIASHPQAK 126

[Close]
BLAST of Cp4.1LG18g02350 vs. TAIR10
Match: AT2G44620.1 (AT2G44620.1 mitochondrial acyl carrier protein 1)

HSP 1 Score: 134.0 bits (336), Expect = 6.4e-32
Identity = 70/128 (54.69%), Postives = 89/128 (69.53%), Query Frame = 1 

Query: 1   MAARNSLLKHLRVHVQALPKTNSPIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVISV 60
           MA RN++L+HLRV VQ L    S I ++        R FS       L +  V DRV+ V
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIGFLGTI-----RSFSSH--DDHLSREAVVDRVLDV 60

Query: 61  VKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVD 120
           VK F KVDPSKVTP  HFQNDLGLDSLDTVE+VMA+EEEF+ EIPD EADKI++ +LA++
Sbjct: 61  VKSFPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIE 120

Query: 121 FIASHPQA 129
           ++ +HP +
Sbjct: 121 YVYNHPMS 121

[Close]
BLAST of Cp4.1LG18g02350 vs. TAIR10
Match: AT5G47630.1 (AT5G47630.1 mitochondrial acyl carrier protein 3)

HSP 1 Score: 87.0 bits (214), Expect = 9.0e-18
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 1 

Query: 4   RNSLLKHLRVHVQALPKTNSPIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVISVVKK 63
           R+S+L+HLR+ V   P   S +   N F +I    F+ E       + ++  RVI +VKK
Sbjct: 5   RSSILQHLRLRVSVRP--TSLLQNENGFKSIGIFNFTSEAAADG-GQDQILSRVIELVKK 64

Query: 64  FQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLAVDFIA 123
           + K + S+VT  A FQ DL LDSLD  E+VMA+EEEF  EIPD +ADK+        +I 
Sbjct: 65  YDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATYIL 124

Query: 124 SHPQAK 130
           S    K
Sbjct: 125 SETPTK 127

[Close]
BLAST of Cp4.1LG18g02350 vs. TAIR10
Match: AT3G05020.1 (AT3G05020.1 acyl carrier protein 1)

HSP 1 Score: 60.8 bits (146), Expect = 6.9e-10
Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 1 

Query: 34  IRRRLFSEEVRGSFLDKSEVTDRVISVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVV 93
           +RR + S  +  S   K E  ++V ++VKK   + P K         DLG DSLDTVE+V
Sbjct: 41  LRRSIPSRRLSVSCAAKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIV 100

Query: 94  MALEEEFRFEIPDNEADKINAINLAVDFI 123
           M LEEEF  ++ + +A KI  +  A + I
Sbjct: 101 MGLEEEFNIQMAEEKAQKIATVEQAAELI 129

[Close]
BLAST of Cp4.1LG18g02350 vs. TAIR10
Match: AT5G27200.1 (AT5G27200.1 acyl carrier protein 5)

HSP 1 Score: 57.0 bits (136), Expect = 1.0e-08
Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = 1 

Query: 36  RRLFSEEVRGSFLDKSEVTDRVISVVKK-FQKVDPSKVTPTAHFQNDLGLDSLDTVEVVM 95
           RRL    +  S   K E  ++V  +VKK     D  KVT    F  +LG DSLDTVE+VM
Sbjct: 44  RRLMPARLAVSCAVKQETVEKVSEIVKKQLSLTDDQKVTAGTKF-TELGADSLDTVEIVM 103

Query: 96  ALEEEFRFEIPDNEADKINAINLAVDFIASHPQAK 130
            LEEEF   + +  A +I  +  A + I    Q K
Sbjct: 104 GLEEEFGITMAEERAKEIATVQQAAELIEELVQEK 137

[Close]
BLAST of Cp4.1LG18g02350 vs. NCBI nr
Match: gi|595830791|ref|XP_007206137.1| (hypothetical protein PRUPE_ppa013239mg [Prunus persica])

HSP 1 Score: 201.1 bits (510), Expect = 1.2e-48
Identity = 105/131 (80.15%), Postives = 117/131 (89.31%), Query Frame = 1 

Query: 2   AARNSLLKHLRVHVQALPKTNS---PIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVI 61
           AAR+++LK+LRV V A+P   S   P+F ++PFNAIRRRLFSEEVRG+FLDKSEVTDRVI
Sbjct: 4   AARSAILKYLRVPVPAVPSNPSSTTPLF-LSPFNAIRRRLFSEEVRGTFLDKSEVTDRVI 63

Query: 62  SVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLA 121
           SVVK FQKVDPSKVTP AHFQNDLGLDSLD VE+VMALEEEF FEIPDNEADKIN+I LA
Sbjct: 64  SVVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFGFEIPDNEADKINSIGLA 123

Query: 122 VDFIASHPQAK 130
           VDFI+SHPQAK
Sbjct: 124 VDFISSHPQAK 133

[Close]
BLAST of Cp4.1LG18g02350 vs. NCBI nr
Match: gi|703116829|ref|XP_010101233.1| (Acyl carrier protein 2 [Morus notabilis])

HSP 1 Score: 199.9 bits (507), Expect = 2.7e-48
Identity = 104/131 (79.39%), Postives = 115/131 (87.79%), Query Frame = 1 

Query: 1   MAARNSLLKHLRVHVQALPKTNSPI--FYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVI 60
           MAAR  LLKHLRV VQA+P+  S      ++ F+A+RRR FSEEVRGSFLDKSEVTDRVI
Sbjct: 1   MAARGLLLKHLRVQVQAVPQNPSSTGSLLLSSFHALRRRFFSEEVRGSFLDKSEVTDRVI 60

Query: 61  SVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLA 120
           SVVK FQKVDP+KVTP AHFQNDLGLDSLD VE+VMALEEEFRFEIPDNEADKI++I+LA
Sbjct: 61  SVVKNFQKVDPAKVTPIAHFQNDLGLDSLDAVELVMALEEEFRFEIPDNEADKISSISLA 120

Query: 121 VDFIASHPQAK 130
           VDFIASHPQAK
Sbjct: 121 VDFIASHPQAK 131

[Close]
BLAST of Cp4.1LG18g02350 vs. NCBI nr
Match: gi|694365439|ref|XP_009361580.1| (PREDICTED: acyl carrier protein 2, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 195.7 bits (496), Expect = 5.1e-47
Identity = 102/131 (77.86%), Postives = 116/131 (88.55%), Query Frame = 1 

Query: 2   AARNSLLKHLRVHVQALPKTNS---PIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVI 61
           +ARN LLKHLRV VQA+P   S   P+F ++PF AIRRRLFSEEVRG+FLDKSEVTDRV+
Sbjct: 4   SARNVLLKHLRVQVQAVPSNPSSTVPLF-LSPFAAIRRRLFSEEVRGTFLDKSEVTDRVV 63

Query: 62  SVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLA 121
           SVVK FQKVDPSKVTP A+F++DLGLDSLD+VE+VMALEEEF FEIPDNEADKI +I LA
Sbjct: 64  SVVKNFQKVDPSKVTPNANFESDLGLDSLDSVEIVMALEEEFGFEIPDNEADKIKSIGLA 123

Query: 122 VDFIASHPQAK 130
           VDFI+SHPQAK
Sbjct: 124 VDFISSHPQAK 133

[Close]
BLAST of Cp4.1LG18g02350 vs. NCBI nr
Match: gi|657958634|ref|XP_008370844.1| (PREDICTED: acyl carrier protein 2, mitochondrial [Malus domestica])

HSP 1 Score: 195.7 bits (496), Expect = 5.1e-47
Identity = 102/131 (77.86%), Postives = 116/131 (88.55%), Query Frame = 1 

Query: 2   AARNSLLKHLRVHVQALPKTNS---PIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVI 61
           +ARN LLKHLRV VQA+P   S   P+F ++PF AIRRRLFSEEVRG+FLDKSEVTDRV+
Sbjct: 4   SARNVLLKHLRVQVQAVPSNPSSTAPLF-LSPFAAIRRRLFSEEVRGTFLDKSEVTDRVV 63

Query: 62  SVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLA 121
           SVVK FQKVDPSKVTP A+F++DLGLDSLD+VE+VMALEEEF FEIPDNEADKI +I LA
Sbjct: 64  SVVKNFQKVDPSKVTPNANFESDLGLDSLDSVEIVMALEEEFGFEIPDNEADKIKSIGLA 123

Query: 122 VDFIASHPQAK 130
           VDFI+SHPQAK
Sbjct: 124 VDFISSHPQAK 133

[Close]
BLAST of Cp4.1LG18g02350 vs. NCBI nr
Match: gi|658020750|ref|XP_008345753.1| (PREDICTED: acyl carrier protein 2, mitochondrial-like [Malus domestica])

HSP 1 Score: 195.7 bits (496), Expect = 5.1e-47
Identity = 102/131 (77.86%), Postives = 116/131 (88.55%), Query Frame = 1 

Query: 2   AARNSLLKHLRVHVQALPKTNS---PIFYVNPFNAIRRRLFSEEVRGSFLDKSEVTDRVI 61
           +ARN LLKHLRV VQA+P   S   P+F ++PF AIRRRLFSEEVRG+FLDKSEVTDRV+
Sbjct: 4   SARNVLLKHLRVQVQAVPSNPSSTXPLF-LSPFAAIRRRLFSEEVRGTFLDKSEVTDRVV 63

Query: 62  SVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADKINAINLA 121
           SVVK FQKVDPSKVTP A+F++DLGLDSLD+VE+VMALEEEF FEIPDNEADKI +I LA
Sbjct: 64  SVVKNFQKVDPSKVTPNANFESDLGLDSLDSVEIVMALEEEFGFEIPDNEADKIKSIGLA 123

Query: 122 VDFIASHPQAK 130
           VDFI+SHPQAK
Sbjct: 124 VDFISSHPQAK 133

The following BLAST results are available for this feature:
BLAST of Cp4.1LG18g02350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ACPM2_ARATH3.6e-4575.97Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=... [more]
ACPM1_ARATH1.1e-3054.69Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=... [more]
ACPM_NEUCR3.7e-2152.17Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74... [more]
ACPM_SCHPO6.5e-1853.09Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strai... [more]
ACPM3_ARATH1.6e-1641.27Acyl carrier protein 3, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=2 SV=... [more]
BLAST of Cp4.1LG18g02350 vs. TrEMBL
Match NameE-valueIdentityDescription
M5W1T8_PRUPE8.4e-4980.15Acyl carrier protein OS=Prunus persica GN=PRUPE_ppa013239mg PE=3 SV=1[more]
W9RQC9_9ROSA1.9e-4879.39Acyl carrier protein OS=Morus notabilis GN=L484_005582 PE=3 SV=1[more]
E6Y2N3_TRISB6.1e-4780.30Acyl carrier protein OS=Triadica sebifera GN=acp PE=2 SV=1[more]
B9IQ34_POPTR1.3e-4676.52Acyl carrier protein OS=Populus trichocarpa GN=POPTR_0019s08300g PE=3 SV=1[more]
A9PBC4_POPTR5.1e-4675.76Acyl carrier protein OS=Populus trichocarpa PE=2 SV=1[more]
BLAST of Cp4.1LG18g02350 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G65290.12.1e-4675.97 mitochondrial acyl carrier protein 2[more]
AT2G44620.16.4e-3254.69 mitochondrial acyl carrier protein 1[more]
AT5G47630.19.0e-1841.27 mitochondrial acyl carrier protein 3[more]
AT3G05020.16.9e-1038.20 acyl carrier protein 1[more]
AT5G27200.11.0e-0838.95 acyl carrier protein 5[more]
BLAST of Cp4.1LG18g02350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|595830791|ref|XP_007206137.1|1.2e-4880.15hypothetical protein PRUPE_ppa013239mg [Prunus persica][more]
gi|703116829|ref|XP_010101233.1|2.7e-4879.39Acyl carrier protein 2 [Morus notabilis][more]
gi|694365439|ref|XP_009361580.1|5.1e-4777.86PREDICTED: acyl carrier protein 2, mitochondrial-like [Pyrus x bretschneideri][more]
gi|657958634|ref|XP_008370844.1|5.1e-4777.86PREDICTED: acyl carrier protein 2, mitochondrial [Malus domestica][more]
gi|658020750|ref|XP_008345753.1|5.1e-4777.86PREDICTED: acyl carrier protein 2, mitochondrial-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006633fatty acid biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR009081PP-bd_ACP
IPR006162Ppantetheine_attach_site
IPR003231Acyl_carrier
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042335 cuticle development
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0009409 response to cold
biological_process GO:0000038 very long-chain fatty acid metabolic process
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0005575 cellular_component
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g02350.1Cp4.1LG18g02350.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003231Acyl carrier protein (ACP)PRODOMPD000887coord: 90..125
score: 5.0
IPR003231Acyl carrier protein (ACP)HAMAPMF_01217Acyl_carriercoord: 52..126
score: 17
IPR003231Acyl carrier protein (ACP)TIGRFAMsTIGR00517TIGR00517coord: 51..125
score: 5.9
IPR006162Phosphopantetheine attachment sitePROSITEPS00012PHOSPHOPANTETHEINEcoord: 81..96
scor
IPR009081Phosphopantetheine binding ACP domainGENE3DG3DSA:1.10.1200.10coord: 43..129
score: 8.1
IPR009081Phosphopantetheine binding ACP domainPFAMPF00550PP-bindingcoord: 55..111
score: 4.6
IPR009081Phosphopantetheine binding ACP domainPROFILEPS50075ACP_DOMAINcoord: 53..123
score: 14
IPR009081Phosphopantetheine binding ACP domainunknownSSF47336ACP-likecoord: 49..125
score: 1.44
NoneNo IPR availablePANTHERPTHR20863ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATEDcoord: 1..129
score: 1.9
NoneNo IPR availablePANTHERPTHR20863:SF30SUBFAMILY NOT NAMEDcoord: 1..129
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG18g02350CmaCh10G008480Cucurbita maxima (Rimu)cmacpeB080
Cp4.1LG18g02350CmaCh11G009200Cucurbita maxima (Rimu)cmacpeB126
Cp4.1LG18g02350CmoCh10G008830Cucurbita moschata (Rifu)cmocpeB055
Cp4.1LG18g02350CmoCh11G009420Cucurbita moschata (Rifu)cmocpeB104
Cp4.1LG18g02350Cla002179Watermelon (97103) v1cpewmB354
Cp4.1LG18g02350ClCG03G011640Watermelon (Charleston Gray)cpewcgB327
Cp4.1LG18g02350Lsi06G006600Bottle gourd (USVL1VR-Ls)cpelsiB299
Cp4.1LG18g02350Bhi02G001150Wax gourdcpewgoB0468
Cp4.1LG18g02350Carg22710Silver-seed gourdcarcpeB0757
Cp4.1LG18g02350Carg17815Silver-seed gourdcarcpeB1341
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG18g02350Cp4.1LG00g01400Cucurbita pepo (Zucchini)cpecpeB006
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG18g02350Cucumber (Gy14) v1cgycpeB0928
Cp4.1LG18g02350Wild cucumber (PI 183967)cpecpiB350
Cp4.1LG18g02350Cucumber (Chinese Long) v2cpecuB349
Cp4.1LG18g02350Watermelon (97103) v1cpewmB356
Cp4.1LG18g02350Melon (DHL92) v3.5.1cpemeB329
Cp4.1LG18g02350Melon (DHL92) v3.5.1cpemeB332
Cp4.1LG18g02350Cucumber (Gy14) v2cgybcpeB039
Cp4.1LG18g02350Melon (DHL92) v3.6.1cpemedB387
Cp4.1LG18g02350Melon (DHL92) v3.6.1cpemedB390
Cp4.1LG18g02350Cucumber (Chinese Long) v3cpecucB0428
Cp4.1LG18g02350Wax gourdcpewgoB0465