CmoCh11G009420 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G009420
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Acyl carrier protein
Location	Cmo_Chr11 : 4898550 .. 4902374 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTATTGGATCATATCACAAGGGGCCATTGAGATGCTAAAATTGTAATGCAACTAAATAACGCTTATTTTGTTGTGGGAACTTAATAGATTCTTCAATGTTTAAGGTACTTTGAGGCCCTTGGATATGCTGGGACTGTTATTATTTTTATCAGATCCCTTGTGTGGTTCTAAGTCGATTCCTATCTAGTGTGATGTATGGAATATATGACAACGGTGGAGTGTTAGAGTACTATTGCTCGGTCATGTCATGTAGATTCGAGCGGACGTTCAATTGCTTCGATTTGAATTATCTGGAGGATGCCTTACTATTTTATCAAAAAGATACCATCAAACCAAGATGACAATCAAATCTATTTCTCTCGATAGAAGCCCAAAGAGATGAATAGGGTCCTAAACAATGATAGATATGTATAAAACAAGTCCGTATGCATATTCCTAATCCTAAATGGAATGTAAGGACGTAGGGATCCATAATGTTTCCATTATGTTTACAAGTCACATATGCATATTCCTAAGAACATTCTTAAGAACGTAGGGATCATTATGTTTGAGATGTAAAAATCTAAATGGAATGTAAGGATGTAGGGATCCATTATATTTAATAGAGAGATAATCCATTATATTTACGAGAGATAATCCATTATATTTACGAACAAATCTATATGTAAACATAGTATCAAATACGTTCGGATGACCTTAGTAATTTTAATTCATTTAGAAGATGGGTTTTCTCTTCATGACATATAGGAAAGGTAATTAATGTTAAAGATATTAATGTTATTTTTAAAGATATTAACTAATTTTAAAAAATAAACAAAATATTAATAATTTCTACATAAAATTAACGTTTTTAAAGATATTAACTAATTTTAAAAAATTTTAGAATATTTTTTAAACAAAATATTTTTCAAATTTTGTATTATTAAAATTTTTGAAAATTTAGAGTTATGTATTTTTTAGATAATAATATTCTTATTAATTAACCGGAAAAAAAAATATATTATTATACGTTTCTCTTACTTCGTTCGTTGCTCTGCGTCAAAAACCGCATAAAACCTCTCTCACGAGCAGCCATTTCTTCGAGCTCTCGAAACTGCATATATCAGTTCCAATGGCGGCGAGGAATTCTCTACTGAAGTATATTAGGGTTCACGTACAGGCCCTGCCCAAATCCAATACCCCCGTTCTCTATGTCCACCCCTTCAATGCGATTCGACGCCGTCTCTTCTCCGAGGAGGTGAGGGGTTCTTTTCTTGACAAATCGGAAGTCGCTGACCGCGTCATTTCCGTTGTCAAGAAATTTCAGAAGGTCGATCCTTGCAAGGTATGAGAAATACTCTATTCCTTTCATGATTGATTTTGATTTAATGTGTCTGATATCAAATTACGCAATTAAGTTTCTGTGAGCTACGCTTCGCGTTTGCAGTGGCTTTCTGTTCGTTTATTAACTTTGAATTTTAGGGTTGATTTGGTTTGTGATCTACTAGTGAGAACGTATTGTGCGTTTTCATTGTACTTGCAAATTAGGGATGTGTATCTATGTTCTAAAGTATTAAAAACATATTGAAATAGGATGCATTACTCAATAGAAGTTTTTAGATGGACACGACTCTCCACAAGGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCTCCAAAATGCCTCATACCAATGGAGATAGTATTCTTTGATTATAAACTCATGATCATTCCCTAAATTAACCGCTGTGGGACTTTCATCATCCAACACCTCCCCTCGAACAAAGTACGCCTCCCCTTAATCGAGGCTCGACTCCTTTGAAGTCTTAGTCATTTTTTACTATACCTTTGAGGAGGCTTGACTCCTTTTCTTTTGGAGTCGTTTGTTCGACATTTGAGGATTTGCCAATCTATTGGCACGACTAAGTTTAGGGCATGTCTCTGATACAATGTTAGATGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGCTTCCCCAAAAGGTCTCATACCAATGGAGATAGTATTCTTTGATTATAAACCCATGTCATTCCCTAAATTAACTGATGTGGGACTTTCATCATCCAACAGAAGTATGGTTGATGAAGTATATTTTCTTACCCCCACCAATGGAACCTCAACTCTCAGCCTTCAAGCTATTCCTCTTCGGCAGATTCTTCTTCCAGTGAAGTTTTTCATTTGTATTATCCTTCTCAAAGATATCATTAACTAACATGGGCTTGCATGATTTGGAAATGTGTTTGAGCATTGATGTTAGATTTGGTATACATTTTCGAAAGCTTCACCTTTTACTGAAACTCTTAATTTTGAAGAGTTTACAAACAATAACTCCAGTCCCATTAATGACATTTAAATGACTGATGAATCTTCGATTCAAATTTTGTTTGAACATGCCCCTTCTGTGGGTTTCAAAACACCTTCTGAAGCTTCCCTGAAGGCTTTTGAGTCTACCTATCATTATCTTATTCTCGAAAATTTTGGCTTTATTCTTCATTTCATCCGTTCATTGAGGATAATTCTTTGAATACTGATTTAATCGAAGAAAGTTGTTCAAGTCTTTTAGCCCCCCATATGAAGCAAGTTGCCTCTTCACCTTCTTATCCTTCACAGTTTTTACTTCCCCATACTTGCAACCAAAATGTTGTATCCCCTTTGAATCCAGATTCTTTATTAACTAGAGGAGTTCTCCACTTGACAAAATACCATGCTCCTCTTTCACATGATTCTGATTCCAACGTTAGCATTAAAAAGTGTTGAATCAGTTATGGAGCCTAACTTGGAGGATGGTGTTCTTGAAGATTCTTATTTTGAAGCTTTTGGTTCATTATTTTAGGAAGATGACAATGATACTCTTCTTCTTCCTTTATAAATTCTATTGTTCCCTCCATTCAAATACCCCACAGCAACTTGTTTGTCACACCACTTTGCCCTTCTCCCTAAAGGGAAGATTCAGATGCACCTCCTCCATCATAGACCTCCTATATCCGTGTGCACCTCACAAGCCTCGAATGGACTCGTCCAACGCCCCTAAAGGTAAAGAGATGCAAGTTTAGAACAAATGATTAAGACTCTCCTCATTCCTCCGGTAAAGAATGAACCATTCCAGTTACACACAGGAAAATAGAAAGAGAAATCCTTTTTTTTGGTTTTTGAATTGTCTGCTGTCATGTGGATTTTCTTTTTCATCCTTTCTTAAATTGTAGGATCTCAATTATTCATATGAAAATACTTGTTTAGGTAGAGTACCAGGTGCATTTGAAACTCGCATAGAAATTTTAAGCACTGCATTCATTTCTATCTTTCTTTTTTCACGAGTTGATAATGCATATTATACATTCTCTGCCAGGTTACTCCAACGGCCCATTTTCAAAATGATTTAGGATTGGACAGTTTAGATACTGTGGAGGTTGTGATGGCTCTTGAAGAAGAGTTCCGTTTTGAAATTCCTGATAATGAATCAGACAAAATCAATGCTATCAATCTTGCTGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAGTCCGAAGCTGCACATGCTTTCACTCGGGTTTCTCCTATCTTGACGAGAAATTAGGTACCGTTAGACTTCCCTTATTTATCCCACTGTATTTTTATTTCGCTCGAAACTGGGTTGAGCCAGCTTCAAGCTGCATAAGTTGATGCAAACTGTTATTGGCTAAAATGAATCAACTGAGCCTATATTTCAATAATGATTTGATGAGCTTCTCCCGTTAACTTATTTGTGAACTAGTTCAACATGC

mRNA sequence

ATGTCTTATTGGATCATATCACAAGGGGCCATTGAGATGCTAAAATTCCATTTCTTCGAGCTCTCGAAACTGCATATATCAGTTCCAATGGCGGCGAGGAATTCTCTACTGAAGTATATTAGGGTTCACGTACAGGCCCTGCCCAAATCCAATACCCCCGTTCTCTATGTCCACCCCTTCAATGCGATTCGACGCCGTCTCTTCTCCGAGGAGGTGAGGGGTTCTTTTCTTGACAAATCGGAAGTCGCTGACCGCGTCATTTCCGTTGTCAAGAAATTTCAGAAGGTCGATCCTTGCAAGGTTACTCCAACGGCCCATTTTCAAAATGATTTAGGATTGGACAGTTTAGATACTGTGGAGGTTGTGATGGCTCTTGAAGAAGAGTTCCGTTTTGAAATTCCTGATAATGAATCAGACAAAATCAATGCTATCAATCTTGCTGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAGTCCGAAGCTGCACATGCTTTCACTCGGGTTTCTCCTATCTTGACGAGAAATTAGGTACCGTTAGACTTCCCTTATTTATCCCACTGTATTTTTATTTCGCTCGAAACTGGGTTGAGCCAGCTTCAAGCTGCATAAGTTGATGCAAACTGTTATTGGCTAAAATGAATCAACTGAGCCTATATTTCAATAATGATTTGATGAGCTTCTCCCGTTAACTTATTTGTGAACTAGTTCAACATGC

Coding sequence (CDS)

ATGTCTTATTGGATCATATCACAAGGGGCCATTGAGATGCTAAAATTCCATTTCTTCGAGCTCTCGAAACTGCATATATCAGTTCCAATGGCGGCGAGGAATTCTCTACTGAAGTATATTAGGGTTCACGTACAGGCCCTGCCCAAATCCAATACCCCCGTTCTCTATGTCCACCCCTTCAATGCGATTCGACGCCGTCTCTTCTCCGAGGAGGTGAGGGGTTCTTTTCTTGACAAATCGGAAGTCGCTGACCGCGTCATTTCCGTTGTCAAGAAATTTCAGAAGGTCGATCCTTGCAAGGTTACTCCAACGGCCCATTTTCAAAATGATTTAGGATTGGACAGTTTAGATACTGTGGAGGTTGTGATGGCTCTTGAAGAAGAGTTCCGTTTTGAAATTCCTGATAATGAATCAGACAAAATCAATGCTATCAATCTTGCTGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAG

Homology

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BLAST of CmoCh11G009420 vs. Swiss-Prot
Match: ACPM2_ARATH (Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 8.4e-44
Identity = 95/129 (73.64%), Postives = 108/129 (83.72%), Query Frame = 1


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MAAR ++L+Y+RV+V   P    P   V PF+ + RR FSEEVRGSFLDKSEV DRV+SV
Sbjct: 1   MAARGAMLRYLRVNVN--PTIQNPRECVLPFSILLRR-FSEEVRGSFLDKSEVTDRVLSV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VK FQKVDP KVTP A+FQNDLGLDSLD+VEVVMALEEEF FEIPDNE+DKI +I+LAVD
Sbjct: 61  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 120

Query: 150 FIASHPQAK 159
           FIASHPQAK
Sbjct: 121 FIASHPQAK 126

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BLAST of CmoCh11G009420 vs. Swiss-Prot
Match: ACPM1_ARATH (Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.8e-28
Identity = 64/128 (50.00%), Postives = 89/128 (69.53%), Query Frame = 1


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MA RN++L+++RV VQ L  + + + ++        R FS       L +  V DRV+ V
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIGFLGTI-----RSFSSH--DDHLSREAVVDRVLDV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VK F KVDP KVTP  HFQNDLGLDSLDTVE+VMA+EEEF+ EIPD E+DKI++ +LA++
Sbjct: 61  VKSFPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIE 120

Query: 150 FIASHPQA 158
           ++ +HP +
Sbjct: 121 YVYNHPMS 121

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BLAST of CmoCh11G009420 vs. Swiss-Prot
Match: ACPM_NEUCR (Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-12 PE=1 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-20
Identity = 59/115 (51.30%), Postives = 75/115 (65.22%), Query Frame = 1


Query: 44  VQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISVVKKFQKV-DPCKVT 103
           VQA+PK       V  F A+R   +S    G  L K EV  R+  V+  F KV DP  +T
Sbjct: 31  VQAVPK-------VAAFQAVR--FYSA---GGHLKKDEVFSRIAQVLSGFDKVNDPKNIT 90

Query: 104 PTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVDFIASHPQA 158
            TAHF NDLGLDSLDTVEVVMA+EEEF  EIPD ++D+I++++ AV++I S P A
Sbjct: 91  ETAHFANDLGLDSLDTVEVVMAIEEEFSIEIPDKDADQIHSVDKAVEYILSQPDA 133

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BLAST of CmoCh11G009420 vs. Swiss-Prot
Match: ACPM_SCHPO (Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4H3.09 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.3e-17
Identity = 42/81 (51.85%), Postives = 59/81 (72.84%), Query Frame = 1


Query: 79  KSEVADRVISVVKKFQKV-DPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNE 138
           + +   R++ VV  F K+ DP KVTPT+ F NDLGLDSLD VEVVMA+EEEF  +IPD +
Sbjct: 32  RPDAEKRILKVVSSFDKIQDPKKVTPTSTFANDLGLDSLDAVEVVMAIEEEFSIQIPDKD 91

Query: 139 SDKINAINLAVDFIASHPQAK 159
           +D+I ++  A+ +I  +P+AK
Sbjct: 92  ADEITSVGDAISYITKNPEAK 112

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BLAST of CmoCh11G009420 vs. Swiss-Prot
Match: ACP_LEUMU (Acyl carrier protein OS=Leucothrix mucor GN=acpP PE=1 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 8.2e-15
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 1


Query: 80  SEVADRVISVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESD 139
           S++  RV +VV +   VD  +VT  A F +DLG DSLDTVE+VMALEEEF  EIPD E++
Sbjct: 2   SDIEQRVKNVVVEQLGVDEAEVTNAASFVDDLGADSLDTVELVMALEEEFGTEIPDEEAE 61

Query: 140 KINAINLAVDFIASH 155
           KI  + LA+D++ SH
Sbjct: 62  KITTVQLAIDYVKSH 76

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BLAST of CmoCh11G009420 vs. TrEMBL
Match: M5W1T8_PRUPE (Acyl carrier protein OS=Prunus persica GN=PRUPE_ppa013239mg PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.4e-48
Identity = 102/130 (78.46%), Postives = 115/130 (88.46%), Query Frame = 1


Query: 31  AARNSLLKYIRVHVQALPK--SNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVIS 90
           AAR+++LKY+RV V A+P   S+T  L++ PFNAIRRRLFSEEVRG+FLDKSEV DRVIS
Sbjct: 4   AARSAILKYLRVPVPAVPSNPSSTTPLFLSPFNAIRRRLFSEEVRGTFLDKSEVTDRVIS 63

Query: 91  VVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAV 150
           VVK FQKVDP KVTP AHFQNDLGLDSLD VE+VMALEEEF FEIPDNE+DKIN+I LAV
Sbjct: 64  VVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFGFEIPDNEADKINSIGLAV 123

Query: 151 DFIASHPQAK 159
           DFI+SHPQAK
Sbjct: 124 DFISSHPQAK 133

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BLAST of CmoCh11G009420 vs. TrEMBL
Match: W9RQC9_9ROSA (Acyl carrier protein OS=Morus notabilis GN=L484_005582 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.5e-47
Identity = 102/131 (77.86%), Postives = 115/131 (87.79%), Query Frame = 1


Query: 30  MAARNSLLKYIRVHVQALPK--SNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVI 89
           MAAR  LLK++RV VQA+P+  S+T  L +  F+A+RRR FSEEVRGSFLDKSEV DRVI
Sbjct: 1   MAARGLLLKHLRVQVQAVPQNPSSTGSLLLSSFHALRRRFFSEEVRGSFLDKSEVTDRVI 60

Query: 90  SVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLA 149
           SVVK FQKVDP KVTP AHFQNDLGLDSLD VE+VMALEEEFRFEIPDNE+DKI++I+LA
Sbjct: 61  SVVKNFQKVDPAKVTPIAHFQNDLGLDSLDAVELVMALEEEFRFEIPDNEADKISSISLA 120

Query: 150 VDFIASHPQAK 159
           VDFIASHPQAK
Sbjct: 121 VDFIASHPQAK 131

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BLAST of CmoCh11G009420 vs. TrEMBL
Match: E6Y2N3_TRISB (Acyl carrier protein OS=Triadica sebifera GN=acp PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.8e-45
Identity = 102/131 (77.86%), Postives = 112/131 (85.50%), Query Frame = 1


Query: 30  MAARNSLLKYIRVHVQALPKSNTPV--LYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVI 89
           MAAR +LLKY+R++VQ + +S  P   L+   FN+I RR FSEEVRGSFLDKSEV DRVI
Sbjct: 1   MAARGALLKYLRINVQTVSQSPRPNSGLFALSFNSIVRR-FSEEVRGSFLDKSEVTDRVI 60

Query: 90  SVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLA 149
           SVVK FQKVDP KVTP AHFQNDLGL SLDTVEVVMALEEEF FEIPDNE+DKIN+INLA
Sbjct: 61  SVVKNFQKVDPSKVTPNAHFQNDLGLGSLDTVEVVMALEEEFGFEIPDNEADKINSINLA 120

Query: 150 VDFIASHPQAK 159
           VDFIASHPQAK
Sbjct: 121 VDFIASHPQAK 130

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BLAST of CmoCh11G009420 vs. TrEMBL
Match: B9IQ34_POPTR (Acyl carrier protein OS=Populus trichocarpa GN=POPTR_0019s08300g PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.1e-45
Identity = 98/132 (74.24%), Postives = 114/132 (86.36%), Query Frame = 1


Query: 30  MAARNSLLKYIRVHVQALPKSNTPV---LYVHPFNAIRRRLFSEEVRGSFLDKSEVADRV 89
           MAAR +LLKY+RV VQA+P +  P    L    FN+IRRR FSEEVRG+FLDKSEV DRV
Sbjct: 1   MAARGALLKYLRVKVQAMPTTRNPNNNGLVGLSFNSIRRR-FSEEVRGTFLDKSEVTDRV 60

Query: 90  ISVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINL 149
           ++VVK FQKVDP KVTP AHFQNDLGLDSLD+VE+VMALEEEF+FEIPDNE+DKIN+I+L
Sbjct: 61  VNVVKNFQKVDPSKVTPDAHFQNDLGLDSLDSVEIVMALEEEFQFEIPDNEADKINSISL 120

Query: 150 AVDFIASHPQAK 159
           A+DFI+SHPQAK
Sbjct: 121 AIDFISSHPQAK 131

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BLAST of CmoCh11G009420 vs. TrEMBL
Match: I3RV98_9ERIC (Acyl carrier protein OS=Camellia oleifera GN=ACP PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.3e-45
Identity = 100/130 (76.92%), Postives = 113/130 (86.92%), Query Frame = 1


Query: 30  MAARNSLLKYIRVHVQALPKS-NTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVIS 89
           MAARN+LLKY+RV+V ++P++ N   L +   N +RR  FSEEVRGSFLDKSEVADRVIS
Sbjct: 1   MAARNALLKYLRVNVWSVPQNPNFSPLSLSLSNLVRRH-FSEEVRGSFLDKSEVADRVIS 60

Query: 90  VVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAV 149
           VVK FQKVDP KVTP AHFQNDLGLDSLDTVE+VMA EEEF FEIPDNE+DKI++INLAV
Sbjct: 61  VVKNFQKVDPSKVTPNAHFQNDLGLDSLDTVEIVMAFEEEFGFEIPDNEADKISSINLAV 120

Query: 150 DFIASHPQAK 159
           DFIASHPQAK
Sbjct: 121 DFIASHPQAK 129

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BLAST of CmoCh11G009420 vs. TAIR10
Match: AT1G65290.1 (AT1G65290.1 mitochondrial acyl carrier protein 2)

HSP 1 Score: 177.9 bits (450), Expect = 4.7e-45
Identity = 95/129 (73.64%), Postives = 108/129 (83.72%), Query Frame = 1


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MAAR ++L+Y+RV+V   P    P   V PF+ + RR FSEEVRGSFLDKSEV DRV+SV
Sbjct: 1   MAARGAMLRYLRVNVN--PTIQNPRECVLPFSILLRR-FSEEVRGSFLDKSEVTDRVLSV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VK FQKVDP KVTP A+FQNDLGLDSLD+VEVVMALEEEF FEIPDNE+DKI +I+LAVD
Sbjct: 61  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 120

Query: 150 FIASHPQAK 159
           FIASHPQAK
Sbjct: 121 FIASHPQAK 126

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BLAST of CmoCh11G009420 vs. TAIR10
Match: AT2G44620.1 (AT2G44620.1 mitochondrial acyl carrier protein 1)

HSP 1 Score: 125.9 bits (315), Expect = 2.1e-29
Identity = 64/128 (50.00%), Postives = 89/128 (69.53%), Query Frame = 1


Query: 30  MAARNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 89
           MA RN++L+++RV VQ L  + + + ++        R FS       L +  V DRV+ V
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIGFLGTI-----RSFSSH--DDHLSREAVVDRVLDV 60

Query: 90  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 149
           VK F KVDP KVTP  HFQNDLGLDSLDTVE+VMA+EEEF+ EIPD E+DKI++ +LA++
Sbjct: 61  VKSFPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIE 120

Query: 150 FIASHPQA 158
           ++ +HP +
Sbjct: 121 YVYNHPMS 121

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BLAST of CmoCh11G009420 vs. TAIR10
Match: AT5G47630.1 (AT5G47630.1 mitochondrial acyl carrier protein 3)

HSP 1 Score: 78.6 bits (192), Expect = 3.9e-15
Identity = 47/126 (37.30%), Postives = 70/126 (55.56%), Query Frame = 1


Query: 33  RNSLLKYIRVHVQALPKSNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISVVKK 92
           R+S+L+++R+ V   P S   +   + F +I    F+ E       + ++  RVI +VKK
Sbjct: 5   RSSILQHLRLRVSVRPTSL--LQNENGFKSIGIFNFTSEAAADG-GQDQILSRVIELVKK 64

Query: 93  FQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVDFIA 152
           + K +  +VT  A FQ DL LDSLD  E+VMA+EEEF  EIPD ++DK+        +I 
Sbjct: 65  YDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATYIL 124

Query: 153 SHPQAK 159
           S    K
Sbjct: 125 SETPTK 127

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BLAST of CmoCh11G009420 vs. TAIR10
Match: AT3G05020.1 (AT3G05020.1 acyl carrier protein 1)

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-09
Identity = 33/89 (37.08%), Postives = 49/89 (55.06%), Query Frame = 1


Query: 63  IRRRLFSEEVRGSFLDKSEVADRVISVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVV 122
           +RR + S  +  S   K E  ++V ++VKK   + P K         DLG DSLDTVE+V
Sbjct: 41  LRRSIPSRRLSVSCAAKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIV 100

Query: 123 MALEEEFRFEIPDNESDKINAINLAVDFI 152
           M LEEEF  ++ + ++ KI  +  A + I
Sbjct: 101 MGLEEEFNIQMAEEKAQKIATVEQAAELI 129

[Close]

BLAST of CmoCh11G009420 vs. TAIR10
Match: AT5G27200.1 (AT5G27200.1 acyl carrier protein 5)

HSP 1 Score: 55.1 bits (131), Expect = 4.6e-08
Identity = 36/95 (37.89%), Postives = 48/95 (50.53%), Query Frame = 1


Query: 65  RRLFSEEVRGSFLDKSEVADRVISVVKK-FQKVDPCKVTPTAHFQNDLGLDSLDTVEVVM 124
           RRL    +  S   K E  ++V  +VKK     D  KVT    F  +LG DSLDTVE+VM
Sbjct: 44  RRLMPARLAVSCAVKQETVEKVSEIVKKQLSLTDDQKVTAGTKF-TELGADSLDTVEIVM 103

Query: 125 ALEEEFRFEIPDNESDKINAINLAVDFIASHPQAK 159
            LEEEF   + +  + +I  +  A + I    Q K
Sbjct: 104 GLEEEFGITMAEERAKEIATVQQAAELIEELVQEK 137

[Close]

BLAST of CmoCh11G009420 vs. NCBI nr
Match: gi|595830791|ref|XP_007206137.1| (hypothetical protein PRUPE_ppa013239mg [Prunus persica])

HSP 1 Score: 200.7 bits (509), Expect = 1.9e-48
Identity = 102/130 (78.46%), Postives = 115/130 (88.46%), Query Frame = 1


Query: 31  AARNSLLKYIRVHVQALPK--SNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVIS 90
           AAR+++LKY+RV V A+P   S+T  L++ PFNAIRRRLFSEEVRG+FLDKSEV DRVIS
Sbjct: 4   AARSAILKYLRVPVPAVPSNPSSTTPLFLSPFNAIRRRLFSEEVRGTFLDKSEVTDRVIS 63

Query: 91  VVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAV 150
           VVK FQKVDP KVTP AHFQNDLGLDSLD VE+VMALEEEF FEIPDNE+DKIN+I LAV
Sbjct: 64  VVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFGFEIPDNEADKINSIGLAV 123

Query: 151 DFIASHPQAK 159
           DFI+SHPQAK
Sbjct: 124 DFISSHPQAK 133

[Close]

BLAST of CmoCh11G009420 vs. NCBI nr
Match: gi|703116829|ref|XP_010101233.1| (Acyl carrier protein 2 [Morus notabilis])

HSP 1 Score: 196.4 bits (498), Expect = 3.7e-47
Identity = 102/131 (77.86%), Postives = 115/131 (87.79%), Query Frame = 1


Query: 30  MAARNSLLKYIRVHVQALPK--SNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVI 89
           MAAR  LLK++RV VQA+P+  S+T  L +  F+A+RRR FSEEVRGSFLDKSEV DRVI
Sbjct: 1   MAARGLLLKHLRVQVQAVPQNPSSTGSLLLSSFHALRRRFFSEEVRGSFLDKSEVTDRVI 60

Query: 90  SVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLA 149
           SVVK FQKVDP KVTP AHFQNDLGLDSLD VE+VMALEEEFRFEIPDNE+DKI++I+LA
Sbjct: 61  SVVKNFQKVDPAKVTPIAHFQNDLGLDSLDAVELVMALEEEFRFEIPDNEADKISSISLA 120

Query: 150 VDFIASHPQAK 159
           VDFIASHPQAK
Sbjct: 121 VDFIASHPQAK 131

[Close]

BLAST of CmoCh11G009420 vs. NCBI nr
Match: gi|658020750|ref|XP_008345753.1| (PREDICTED: acyl carrier protein 2, mitochondrial-like [Malus domestica])

HSP 1 Score: 191.0 bits (484), Expect = 1.5e-45
Identity = 97/130 (74.62%), Postives = 114/130 (87.69%), Query Frame = 1


Query: 31  AARNSLLKYIRVHVQALPK--SNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVIS 90
           +ARN LLK++RV VQA+P   S+T  L++ PF AIRRRLFSEEVRG+FLDKSEV DRV+S
Sbjct: 4   SARNVLLKHLRVQVQAVPSNPSSTXPLFLSPFAAIRRRLFSEEVRGTFLDKSEVTDRVVS 63

Query: 91  VVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAV 150
           VVK FQKVDP KVTP A+F++DLGLDSLD+VE+VMALEEEF FEIPDNE+DKI +I LAV
Sbjct: 64  VVKNFQKVDPSKVTPNANFESDLGLDSLDSVEIVMALEEEFGFEIPDNEADKIKSIGLAV 123

Query: 151 DFIASHPQAK 159
           DFI+SHPQAK
Sbjct: 124 DFISSHPQAK 133

[Close]

BLAST of CmoCh11G009420 vs. NCBI nr
Match: gi|657958634|ref|XP_008370844.1| (PREDICTED: acyl carrier protein 2, mitochondrial [Malus domestica])

HSP 1 Score: 191.0 bits (484), Expect = 1.5e-45
Identity = 97/130 (74.62%), Postives = 114/130 (87.69%), Query Frame = 1


Query: 31  AARNSLLKYIRVHVQALPK--SNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVIS 90
           +ARN LLK++RV VQA+P   S+T  L++ PF AIRRRLFSEEVRG+FLDKSEV DRV+S
Sbjct: 4   SARNVLLKHLRVQVQAVPSNPSSTAPLFLSPFAAIRRRLFSEEVRGTFLDKSEVTDRVVS 63

Query: 91  VVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAV 150
           VVK FQKVDP KVTP A+F++DLGLDSLD+VE+VMALEEEF FEIPDNE+DKI +I LAV
Sbjct: 64  VVKNFQKVDPSKVTPNANFESDLGLDSLDSVEIVMALEEEFGFEIPDNEADKIKSIGLAV 123

Query: 151 DFIASHPQAK 159
           DFI+SHPQAK
Sbjct: 124 DFISSHPQAK 133

[Close]

BLAST of CmoCh11G009420 vs. NCBI nr
Match: gi|694365439|ref|XP_009361580.1| (PREDICTED: acyl carrier protein 2, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 190.7 bits (483), Expect = 2.0e-45
Identity = 97/130 (74.62%), Postives = 114/130 (87.69%), Query Frame = 1


Query: 31  AARNSLLKYIRVHVQALPK--SNTPVLYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVIS 90
           +ARN LLK++RV VQA+P   S+T  L++ PF AIRRRLFSEEVRG+FLDKSEV DRV+S
Sbjct: 4   SARNVLLKHLRVQVQAVPSNPSSTVPLFLSPFAAIRRRLFSEEVRGTFLDKSEVTDRVVS 63

Query: 91  VVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAV 150
           VVK FQKVDP KVTP A+F++DLGLDSLD+VE+VMALEEEF FEIPDNE+DKI +I LAV
Sbjct: 64  VVKNFQKVDPSKVTPNANFESDLGLDSLDSVEIVMALEEEFGFEIPDNEADKIKSIGLAV 123

Query: 151 DFIASHPQAK 159
           DFI+SHPQAK
Sbjct: 124 DFISSHPQAK 133

The following BLAST results are available for this feature:

BLAST of CmoCh11G009420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ACPM2_ARATH	8.4e-44	73.64	Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=...	[more]
ACPM1_ARATH	3.8e-28	50.00	Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=...	[more]
ACPM_NEUCR	1.3e-20	51.30	Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74...	[more]
ACPM_SCHPO	2.3e-17	51.85	Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strai...	[more]
ACP_LEUMU	8.2e-15	54.67	Acyl carrier protein OS=Leucothrix mucor GN=acpP PE=1 SV=2	[more]

BLAST of CmoCh11G009420 vs. TrEMBL


Match Name	E-value	Identity	Description
M5W1T8_PRUPE	1.4e-48	78.46	Acyl carrier protein OS=Prunus persica GN=PRUPE_ppa013239mg PE=3 SV=1	[more]
W9RQC9_9ROSA	2.5e-47	77.86	Acyl carrier protein OS=Morus notabilis GN=L484_005582 PE=3 SV=1	[more]
E6Y2N3_TRISB	1.8e-45	77.86	Acyl carrier protein OS=Triadica sebifera GN=acp PE=2 SV=1	[more]
B9IQ34_POPTR	3.1e-45	74.24	Acyl carrier protein OS=Populus trichocarpa GN=POPTR_0019s08300g PE=3 SV=1	[more]
I3RV98_9ERIC	5.3e-45	76.92	Acyl carrier protein OS=Camellia oleifera GN=ACP PE=2 SV=1	[more]

BLAST of CmoCh11G009420 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65290.1	4.7e-45	73.64	mitochondrial acyl carrier protein 2	[more]
AT2G44620.1	2.1e-29	50.00	mitochondrial acyl carrier protein 1	[more]
AT5G47630.1	3.9e-15	37.30	mitochondrial acyl carrier protein 3	[more]
AT3G05020.1	2.5e-09	37.08	acyl carrier protein 1	[more]
AT5G27200.1	4.6e-08	37.89	acyl carrier protein 5	[more]

BLAST of CmoCh11G009420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|595830791\|ref\|XP_007206137.1\|	1.9e-48	78.46	hypothetical protein PRUPE_ppa013239mg [Prunus persica]	[more]
gi\|703116829\|ref\|XP_010101233.1\|	3.7e-47	77.86	Acyl carrier protein 2 [Morus notabilis]	[more]
gi\|658020750\|ref\|XP_008345753.1\|	1.5e-45	74.62	PREDICTED: acyl carrier protein 2, mitochondrial-like [Malus domestica]	[more]
gi\|657958634\|ref\|XP_008370844.1\|	1.5e-45	74.62	PREDICTED: acyl carrier protein 2, mitochondrial [Malus domestica]	[more]
gi\|694365439\|ref\|XP_009361580.1\|	2.0e-45	74.62	PREDICTED: acyl carrier protein 2, mitochondrial-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003231	Acyl_carrier
IPR006162	Ppantetheine_attach_site
IPR009081	PP-bd_ACP

Vocabulary: **Biological Process**
Term	Definition
GO:0006633	fatty acid biosynthetic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042335	cuticle development
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0009409	response to cold
biological_process	GO:0000038	very long-chain fatty acid metabolic process
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G009420.1	CmoCh11G009420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003231	Acyl carrier protein (ACP)	PRODOM	PD000887		coord: 119..154 score: 2.0
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 81..155 score: 1
IPR003231	Acyl carrier protein (ACP)	TIGRFAMs	TIGR00517	TIGR00517	coord: 80..154 score: 2.5
IPR006162	Phosphopantetheine attachment site	PROSITE	PS00012	PHOSPHOPANTETHEINE	coord: 110..125 scor
IPR009081	Phosphopantetheine binding ACP domain	GENE3D	G3DSA:1.10.1200.10		coord: 72..158 score: 1.2
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 85..136 score: 5.
IPR009081	Phosphopantetheine binding ACP domain	PROFILE	PS50075	ACP_DOMAIN	coord: 82..152 score: 13
IPR009081	Phosphopantetheine binding ACP domain	unknown	SSF47336	ACP-like	coord: 78..154 score: 9.55
None	No IPR available	PANTHER	PTHR20863	ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED	coord: 26..158 score: 4.0
None	No IPR available	PANTHER	PTHR20863:SF30	SUBFAMILY NOT NAMED	coord: 26..158 score: 4.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh11G009420	CmaCh10G008480	Cucurbita maxima (Rimu)	cmacmoB074
CmoCh11G009420	CmaCh11G009200	Cucurbita maxima (Rimu)	cmacmoB112
CmoCh11G009420	Cla002179	Watermelon (97103) v1	cmowmB087
CmoCh11G009420	ClCG03G011640	Watermelon (Charleston Gray)	cmowcgB101
CmoCh11G009420	Lsi06G006600	Bottle gourd (USVL1VR-Ls)	cmolsiB118
CmoCh11G009420	Cp4.1LG18g02350	Cucurbita pepo (Zucchini)	cmocpeB104
CmoCh11G009420	Cp4.1LG00g01400	Cucurbita pepo (Zucchini)	cmocpeB079
CmoCh11G009420	Cla97C03G061940	Watermelon (97103) v2	cmowmbB101
CmoCh11G009420	Carg22710	Silver-seed gourd	carcmoB0727
CmoCh11G009420	Carg17815	Silver-seed gourd	carcmoB1298

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh11G009420	CmoCh10G008830	Cucurbita moschata (Rifu)	cmocmoB044

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh11G009420	Cucumber (Chinese Long) v3	cmocucB0090
CmoCh11G009420	Wax gourd	cmowgoB0159
CmoCh11G009420	Melon (DHL92) v3.5.1	cmomeB097
CmoCh11G009420	Cucumber (Gy14) v1	cgycmoB0973
CmoCh11G009420	Wild cucumber (PI 183967)	cmocpiB078
CmoCh11G009420	Cucumber (Chinese Long) v2	cmocuB075
CmoCh11G009420	Melon (DHL92) v3.5.1	cmomeB099
CmoCh11G009420	Cucumber (Gy14) v2	cgybcmoB027
CmoCh11G009420	Melon (DHL92) v3.6.1	cmomedB104
CmoCh11G009420	Melon (DHL92) v3.6.1	cmomedB107