Lsi06G006600 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G006600
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Acyl carrier protein
Location	chr06 : 10022364 .. 10030411 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTCATTATAATAATTTTCTAAAATTTAACCAATATTTTATATTTAAAAATTCCCCCAAATAGGTTTCTCCCCTTCGCTTGGCCTGCGTCAAATACCGCATAGAGCTTCCCTCACGAGCAACCATTTTCTTCGAACGCTTGAAAGTACATTTTTCACTTCCAATGGCGGCTAGAAACTCTCTGCTGAAGCATCTAAGGGTTCATGTCAAGGCCCTGCCCAAAACCAACAGCCCCAGTTTCTACGTCAACCCCTTCAATGCGATTCGATACCGTCTCGTCTCCGAGGAGGTGAGGGGTTCTTTTCTCGACAAATCGGAAGTCACTGACCGTGTCATTTCCGTTGTTAAGAAATTTCAGAAAGTCGATCCTTCCAAGGTAAGAGAAATGTTCTATTCCTTTTAGGATTGCTTTAATTAATTGAGTTTCTGTGAGCTTCGATTTGTGATTGCAGTGGGCTTCATTTAGTTTAATAGCTTTGAAATTTAGGGTTGATTTGGCTGGCGATCTAAAAACAAGATGTGAGAACTTAGTGGTTATATTATGTGTTTTCATTGTATTTGGAAATTTGCCCGGTAGCGAATTAGAAATGTATCGTATATCTATGTTCTAAATCTAATGTACTAAGAAAAACATTGAAAATAGGACACATAGTTCAATAGAAGTCTGGTTGAATCCATTTAGAAGATTTAAGAAAAAAAAATTTAGAGTACAACAATATTTGGGACTGACAGATTCTAACCTCAACCCCTAGAGCTGGGTTGTATATATGTGCGGCATAGAAAATTTGTATTGTAATTTATAATGGATAATACAGTCACGCGTGTACACAAATAAACAATATCTAAGGGCATGTGATATTGTTGCGTATTGTCACACTGACTCCAAAATAATTTTAAAAGAATGGAGATGTAAATATCAGGAGTTTACACTTAGCAGTATTTGGTTATTTTCATACGAGAGTATCACGAACAGTCCCTTCCATTTGTGAACATACACAAATTACAAGCTTTCTCATGAGTAGCGCTAGGAGGCTCAAGAATGGAGCCTAATTTGGCCATGTTCTTTGAGCCCTAAATGAAGGGAGGTTTTGAAGAGCCTCAGCTTCTCATTTCTTAGTCACAGACTTAGTTCATACTTGTAAAAGCAGCTTCCAAGGTGCTCTGTCCATAGATTTGGATAATTTTACAATCACAATGACTATATGAACAACCAATGGTGGGTCTACTAAAAGATTCCAACCTCTTTGTAATAGACTGCGGATATCAAAATTATATCTGAGCAGCTTTGTTACTCACTGTCATCGTTGATACTTGCACGCAATTATATGTCGTTCAGTGGAAATTTTGAGCTTTTAATTAATCTGTTCTCTTGATTAACATATCTCAGAACATAATAAGTACGGTTACACTATTGGATGACCATAAGTTATTGTCAATTGTTTGTATATGAGCTTAAAGTGAAACTGGGAGGCAAAGCAGTTATCATACGAAGCAATGAGCCTCTGTTCTTGGATCATCACATTCCATGATCCTTGTCTGCGATGCATCAGCTCCCAGTATAAACGGTGAATTCAAGTTAGGGAGGGTCAACAAAGATAAGTAATAATGCCAAGATTGCGTAGTCTTTCAAAAACATCTTATACATACTTCCCAGTACCGGTCAAAAAATCCTTCCACAATTGCATTCCCTGGGCCAAACAATATAGCAATCATTTGGAGCATACTTTCAGTATATATATTTTGGGTCTTCTATTATATGTATATATTTTTATAGGTTTAAGTACTACTTTGTTAGGTACTTGAGCACGTTGGAGAACCACACTCCAAAAGCTAGCTATTGAGGTGGGAGAGCCAAGCCACTTAAGTACCACATAGGTCATCCCATTCTAACAATGTGGGACAAAGGTAGCCCACACTACCTTGGTTCCTAACAAAATCCTTCCACAATTGCATTCCCTGGGCCAAACAATATAGCAATCATTTGGAGCATACTTTCAGTATATATATTTTGGGTCTTCTATTATATATATATATTTTATAGGTTTAAATATTACTTTGGTCCTTATACTTTTGGTTTTGGTTCATTTTGGTCCATTTTTTTCAAAATGTTCATTTTGGTCCCTATACTTTCAACTTTGGTTTCCCTACTTTTAAAATGTTCATATTGGTCCTTGTACTTTCAACTTTGTTTCATTTGAGTCCTTCTACTTTTAAAAAAGGACCATTTTGGTCCCTTCATTTTCATTTTTAAGGGATCAAAATGATCACTTTTTGAAAGTTCAAGGACTAAAATGAACCAAAGTTGAAATACTTTGAAAGTATAGAGACCAAAATAAATATTTTGAAAGTATATGGATCATAATGAACCAAAATCGAAACTCCAGGGACCAAAGTAATATTTTAACACTTTTTAAAAAAAAAATAATAATTGACTTCTCTATTATAAATTAGAAAAGGTCGACCCTTCTATTGATGTTTTCCCCTTTTCCTTTTCTATAGACTGAAATGAACCCTCACTATGTTTTTCTCCCCATGAGTTGTTCTGTCTCTAGCCCAAACTCATTCTTTTGGCATTTCTTAAGATTAGTATTTTTTTTGTTATTTTAAAATTCATTGTTCTAATTTTGTTTTTTTTTTTTTCCAATTTTGAAATTTTTTTTTGGTTCTTAATTTTATTTTAATTTGTAACTTTATGTTTTCATTTTTATGTCATAATTAGTGTCTAATGCTTTAGATATTCTATGGCTAAGTGTTCTTTTTCCTATATAATTTTATATATTGATTTATCTATTTAAGCGTACCATGCATGTTTCTTTTGAGATCATGAATTTGGGGCATGAATCCCAGAAGGTTCCGGGGGAGTTCAACTCTGGTGGCACTCCTTGTCCCTTAGGGCTCCACCTTGAATGCTTATTGACTTTGGGAAACTAAGATTTTGCACAAGCTTGGATGTTGTCATTGTAGTCTATGGTTTCTTCCCCTACTAAAACTTCACGGCTAAATTTCTTCTGTCCTCACACCTTAATCCCATTGAAGAATGAAGATAAGTAGTACACACCAAGGATGACTCTGCCGTGCCCAAGGGCAAGGGAAAAGAACTACAATCATATTAAGCTGTTCTACACTAGAACTAGGTCTTTGCCTTGCCTATCTCCACTTCTTTGAAGGATGTTTTTGTTCCTAGCATTAAACTGTAATATGTTGTTCTAGTTATGGAAAGGTTCACATTGGGACTATTTTACAAGCTATATATATATATTAGAGAGAGAGAAATAAAATAATAAGTGACCTGACAAGTTTTGATGTGTTGTGGAGGATTAAGATTTTAAAGAATGTCAAATTCTTTACCTGGCCAATTTTACTTGATCGAGTGAACATGTTGGATAGGCTTTCGAGGAAGATGCCCTAGTTAATCGGCCCCTTTTGTTGTATTTTTTGTCGAAAAGCGGAGGAAGACCTAGATTACATTTTCTGGAGCTCTTCATTTGCGAGGTTTGGATTCCATCCTCTCTGAGAAATATCTTGGGCTCTTTGCATTAGCCACACACGGAAAAAAAAAAAACATGGATGGAGCCTCATCTTTCAGAGAAATTTCAAAGATGAGGAATATGAGGATTGGATTAATCCTTATGGATAGCTTAAATGTGATTTTTTTTTTTGAAAGGGAAACAAGACTATTCATTGATATAATGAAAGAGTCTAATGCTCAAAGTACATGAGAGGAAACAAAATAAAAACTACAAACTTGCCAATACAAAGCCAAAACTAAACTCTATTACAAAGACAAATTCTGAAGAAAAATTAAAAACATTCCAATTGAACACATTATCCCAAGAAAGGAGGGGAGATTCGATCTTCATTCGGGGGTGAATTTCATTCATTATGAACTCAAAAGTGTAAGCTTGATTAAGAGGTCTTAAAAACTTCATAGAATTCAATGAATGATCAGCCATTCCATTTGTGCTTGAAGCAAGTAGGCGATGCGAATCTATGGTTTCTATGTTTCAATGGGATACCAATTGCTTGGATGCCTTTGTTTGAAAGCCTCAAGATGATTTGTGGAAAAAATGCTATCTACTATAAGAACCTCTAACTTTGCAACCATCGAGGCATCTTCCAAATGACTTTAACTCGAGCAGACAAACTCGAAATAAAAGAGGAAACGCTTCCACCACAACATCTTACAAAGATTGAACTTGAAATTATGAAGAGCCAACTAAGAAGAATTGACAAAATTCCAAGACTAAATGAAGAAATCAGTTTCTTTCAACAAGCATGTCTGATAGCACCTAACCCATTCATGGCCGTTGGCTAAGATCTCCCAAAACAGCAGTTACTAACTCCATTGATATGCACATGCAGATATTGTCAAGGAAATCTTTGAATTCTGCTTGCTTTTCTGCTGCTCCAAAATCCCAAGCCTCTCGAGACATCCAGCCCCGAACAAAGACAACAACAGCTGTGTACTTCATGTGAACCAATAATATCCATAATTAGCTCCTCATGTGAACCAATAATATCCATAATCAGCTCCTCATTTAATAGCTTCCTGATTTACCAATGCTTCCAAAGAAATCCAACAAAATACATTCAAGATCCAATTGTATTATTGCAATGTAGAACAATATTAATTCTGGAGGTTGGTTTTTTAAGAAAAATTTCTATTATCTTTTGGATGTTTTGGTGAGACTCCTGACATTCACAATCTTCATTTACAAGACACCTCACGAGGAGATGCTATTTCCTGAAGTTGAAAACCACACACTGCCATTAAAGATGGAAATTTAGAGGGTATTTTAGAGGGAGATAAATGTGATCGATCTTACGAAAATTGGACACCAAAGGCATCTTCACAACATAATCTCTTTCTTACAACTTGGGTACAAATAGGAGCAGTCCTACCCACACACTTTGTGAGGCGATTTGGGTTGACATATATCCTAAAAAAATTATACTTTTCCTCTGGGAAATTAGCCACAATGCCATAAATACTTGTGATAAATTGCAAAGGAGATACCCATTCATGTCTATTTCTCCACCCTGCTGTTTAATTTGCAAAGCTGGTTAGGAAACACCTTCTCATCTCTTCATCTACTACCCAATTGCCACCCGATTTTGGAAAGAGATTACCCTATCTTTCAAATGGGCGACAACACTCCCCAATGAGATTATTAGTCTCCTCACATACACATTGATTGGCCGCCCTTTTCACGATGGAAAGCGGATTTTGTGGATGCATTTTGTCCGGGCATTTCTTGGGCAAACATGGAAGGAAAGAAACAATAGACTCTACATTGACAAAGCGAGCACTTATGCCACTTTTCTTTAGAACATCATCTTCCTTACTATGTCATGGAGCAAATGTACCTCATTTTTCAATTCTTATAGTCTCTCTACACTTTTGACCCATTGGAGAAATCTTTTGTAACTCCACTAGTTTGGACGATTTGCCTTCTTTTGTAAATTTATACATCAATGAAATTCTCTTATAAAAAAAAAAAAGAACAAGAACAAAAAAAACCCGACTGAGGGATATTAGTTATTAGAGCAACGATCTGGTAGTTCTTCCTCCATTTGCCTTTTAGAGATGATGGTCGTGACTTGTGGTTGGCGGGGTGTGTGCTTTATTGTGGGATTTTTATGGGAGAGGTACAACATAATGTTTAGAGGTGTAGAGAGGGACCATAGTGATGTTTGATTCTTGGTGAGGTTTCATTTTTCTATGTGGGTCTCGGTTTTGAAATTTTTTTGTAATTATACCCTAGGTAACATTTTCCTTTAGTTAGAAGGAACCCCTTTCTTTAATGGGGTCTTTTTGTGGGCTTAGATTTTTGTATGTCCTTGTATTATTTCATTCTTTCTCAATGAAAGCAGTTGCTTCTATCAATAATAATAACAATAACTAGTGACCTCATTACCTATTAACATCAAGATGAGATCTTTCTTGTTGAGTCTTCCCTTCAATCTTCATGGTCCTTGACTCGTTGGTGAACCAACACCCGCCAGTGAATGAATTGAGAGTTTTGCAGTACCTGAATTATCTTTATTTCTTTTGCTGTTTTCACCGTCAACATCCTCAATGAAGCCAGCTAATTCATCCCGTTTCTACCTATTTTACCTTCATCTCCTTGGAGTTTTTCTTTAGCTCTGTAACTATCATCCTTTACACTCTCTCTCTCACGTGTGCTTATTTTAGTCAATTGGAGAGGGTTTATTTTCTGGATAATCTCTTTGGCGTTCTGGTTGTGTCTGGATATCTTAGTTCTATTTTTCTGATGTACAAATGTATATTCTCTTACTTCAAAATCTCTTATGCTTTCTGGTTGTGTCTGGATTTCTCAGTCCTATTTTTCCTAATGTACAAACGTGCATTCTCTCATTTGGTTAGGGTAATGCATATGTTACTAAAAAGAAGTAGAAAAGAAAATGAAGTCTTCTTCCTGCCCTGAATCTAAGTAAATTACAATTTACAAGTTTCTGGAGAACATGGTACGTGGGCAATGCTTGCATAGATTTTAGTTGTGTTTTCCCTTCTGGGTAGGAAGAGGAGTTACTGTTTTTATGTTTATTATCTTTTCTTTATTGTGGGTGGGGGCAGTAAAAGTGCCCTCTGTTTGTAATCTGTATATCCATCTCAAACCTGCACAAAGTTGGTTGAATCTAGACTGTTCTTGACTCTCGTTCTCTATTCTCCTTGGGTGGGGAGGGTATATATGTAAGAATTCTGGATTTCTTCTCCCTTTTGGTTTCCTTCTCGGGATATTGGTTAAAAGCAATGGATGCAGTGTGTACCCCCCCTGCGACGACAAATCTTTTTTCTCTCCCAATGGTAAATTCCTCAGAAATTTGTATTTGGGATCCCTTTACCACAGACTTCAAACCTCACTTTTTTTTACTTTGTTAGTGTGCCAATTAAAGTTAAAGGGTATGATAAAGTAACTTTTTTTGCTTATGGACTGACTGATGGAAGTGGAACCATAGAATCAAAGACTTGAGATAAACAGTCTTGCAAGAAGAATAAGTCTATATTCACTGTTGACCAGGCAGTAGCTGTGTCGTAGTGTCAGTGTCATAGTGTGGTCTAACCAAGAGGGAGAACAAAAGAGGAGGGGAGAGGGAGCAGCGATATAATGGTAATTGATATTTATAGTGCGTGGTATCACGGCCTAAAATTGAACTAATGCAACTGCGCCTGCTCAGTTCTTACTTCTCTTCAATTGTTTTTTTGTTTTTTGTTTTTTGTTTTTTTTAAATGTATGAAGTCATGTGAACTTTCTTTTTCATCCTTGCTTAAAGAGATAGAACCTTAATTACTCCTTTCTCTAGATGAAATACTCGATTGACTTGTAGGCTGCCATTGCATTTGAAATTCGCATTGAAATTTTAAGCAATTCATTTATTTCTCTTTCTTTCACTGTTTGATAATAGTATTATAAATTCTCTGACAGGTTACTCCAACGGCTCATTTTCAAAATGATCTAGGCTTGGATAGTTTAGATACCGTGGAAGTTGTGATGGCTCTTGAAGAAGAGTTCCGGTTTGAAATTCCTGACAATGAAGCAGACAGAATCAATGCTATCAATCTTGCTGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAGACGAAAGCTACACTTGCTTTCACTCAGGTTTCTCCTATTTCGACGAGAAATTAGGCACTGTTAGATTTTTCTTATCTGTCTCACTGTATTTTTGTTGATGGTTTTCCGTTTGCTATCCTAAATCTTATTCAAGAGAATGATATTGGGCTGAGCCAGCTTCAACCTGCATGAGTTGAGGCAGACTGCTTTGGGCTTTGATGAATTGACTGAGGACATATTTCAATAATGATTTTATGAGCTTTTCCTGTGAACGAACTTGTGAACTAGTTAAACTTGTATTATTTAAGTTAAAAAGCTTAACTTTTTATCGTATTCTAATTCTAAATTGTCAACTTGAGCATAGCTCAATTGGTTAAAGGCATGTCTTCGACTAAGACGTCAATAGATTTAAATCTTCCACTTGCTTTTGAACTCTAAAAAGGG

mRNA sequence

AAGTCATTATAATAATTTTCTAAAATTTAACCAATATTTTATATTTAAAAATTCCCCCAAATAGGTTTCTCCCCTTCGCTTGGCCTGCGTCAAATACCGCATAGAGCTTCCCTCACGAGCAACCATTTTCTTCGAACGCTTGAAAGTACATTTTTCACTTCCAATGGCGGCTAGAAACTCTCTGCTGAAGCATCTAAGGGTTCATGTCAAGGCCCTGCCCAAAACCAACAGCCCCAGTTTCTACGTCAACCCCTTCAATGCGATTCGATACCGTCTCGTCTCCGAGGAGGTGAGGGGTTCTTTTCTCGACAAATCGGAAGTCACTGACCGTGTCATTTCCGTTGTTAAGAAATTTCAGAAAGTCGATCCTTCCAAGGTTACTCCAACGGCTCATTTTCAAAATGATCTAGGCTTGGATAGTTTAGATACCGTGGAAGTTGTGATGGCTCTTGAAGAAGAGTTCCGGTTTGAAATTCCTGACAATGAAGCAGACAGAATCAATGCTATCAATCTTGCTGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAGACGAAAGCTACACTTGCTTTCACTCAGAGAATGATATTGGGCTGAGCCAGCTTCAACCTGCATGAGTTGAGGCAGACTGCTTTGGGCTTTGATGAATTGACTGAGGACATATTTCAATAATGATTTTATGAGCTTTTCCTGTGAACGAACTTGTGAACTAGTTAAACTTGTATTATTTAAGTTAAAAAGCTTAACTTTTTATCGTATTCTAATTCTAAATTGTCAACTTGAGCATAGCTCAATTGGTTAAAGGCATGTCTTCGACTAAGACGTCAATAGATTTAAATCTTCCACTTGCTTTTGAACTCTAAAAAGGG

Coding sequence (CDS)

ATGGCGGCTAGAAACTCTCTGCTGAAGCATCTAAGGGTTCATGTCAAGGCCCTGCCCAAAACCAACAGCCCCAGTTTCTACGTCAACCCCTTCAATGCGATTCGATACCGTCTCGTCTCCGAGGAGGTGAGGGGTTCTTTTCTCGACAAATCGGAAGTCACTGACCGTGTCATTTCCGTTGTTAAGAAATTTCAGAAAGTCGATCCTTCCAAGGTTACTCCAACGGCTCATTTTCAAAATGATCTAGGCTTGGATAGTTTAGATACCGTGGAAGTTGTGATGGCTCTTGAAGAAGAGTTCCGGTTTGAAATTCCTGACAATGAAGCAGACAGAATCAATGCTATCAATCTTGCTGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAG

Protein sequence

MAARNSLLKHLRVHVKALPKTNSPSFYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRVISVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLAVDFIASHPQAK

Homology

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BLAST of Lsi06G006600 vs. Swiss-Prot
Match: ACPM2_ARATH (Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.2e-43
Identity = 96/129 (74.42%), Postives = 109/129 (84.50%), Query Frame = 1


Query: 1   MAARNSLLKHLRVHVKALPKTNSPSFYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRVISV 60
           MAAR ++L++LRV+V   P   +P   V PF+ I  R  SEEVRGSFLDKSEVTDRV+SV
Sbjct: 1   MAARGAMLRYLRVNVN--PTIQNPRECVLPFS-ILLRRFSEEVRGSFLDKSEVTDRVLSV 60

Query: 61  VKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLAVD 120
           VK FQKVDPSKVTP A+FQNDLGLDSLD+VEVVMALEEEF FEIPDNEAD+I +I+LAVD
Sbjct: 61  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 120

Query: 121 FIASHPQAK 130
           FIASHPQAK
Sbjct: 121 FIASHPQAK 126

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BLAST of Lsi06G006600 vs. Swiss-Prot
Match: ACPM1_ARATH (Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 8.2e-29
Identity = 64/128 (50.00%), Postives = 86/128 (67.19%), Query Frame = 1


Query: 1   MAARNSLLKHLRVHVKALPKTNSPSFYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRVISV 60
           MA RN++L+HLRV V+ L    S   ++    +              L +  V DRV+ V
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIGFLGTIRSF-------SSHDDHLSREAVVDRVLDV 60

Query: 61  VKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLAVD 120
           VK F KVDPSKVTP  HFQNDLGLDSLDTVE+VMA+EEEF+ EIPD EAD+I++ +LA++
Sbjct: 61  VKSFPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIE 120

Query: 121 FIASHPQA 129
           ++ +HP +
Sbjct: 121 YVYNHPMS 121

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BLAST of Lsi06G006600 vs. Swiss-Prot
Match: ACPM_NEUCR (Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-12 PE=1 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 3.7e-21
Identity = 58/115 (50.43%), Postives = 74/115 (64.35%), Query Frame = 1


Query: 15  VKALPKTNSPSFYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRVISVVKKFQKV-DPSKVT 74
           V+A+PK       V  F A+R+        G  L K EV  R+  V+  F KV DP  +T
Sbjct: 31  VQAVPK-------VAAFQAVRFYSA-----GGHLKKDEVFSRIAQVLSGFDKVNDPKNIT 90

Query: 75  PTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLAVDFIASHPQA 129
            TAHF NDLGLDSLDTVEVVMA+EEEF  EIPD +AD+I++++ AV++I S P A
Sbjct: 91  ETAHFANDLGLDSLDTVEVVMAIEEEFSIEIPDKDADQIHSVDKAVEYILSQPDA 133

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BLAST of Lsi06G006600 vs. Swiss-Prot
Match: ACPM_SCHPO (Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4H3.09 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.5e-18
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 1


Query: 50  KSEVTDRVISVVKKFQKV-DPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNE 109
           + +   R++ VV  F K+ DP KVTPT+ F NDLGLDSLD VEVVMA+EEEF  +IPD +
Sbjct: 32  RPDAEKRILKVVSSFDKIQDPKKVTPTSTFANDLGLDSLDAVEVVMAIEEEFSIQIPDKD 91

Query: 110 ADRINAINLAVDFIASHPQAK 130
           AD I ++  A+ +I  +P+AK
Sbjct: 92  ADEITSVGDAISYITKNPEAK 112

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BLAST of Lsi06G006600 vs. Swiss-Prot
Match: ACPM3_ARATH (Acyl carrier protein 3, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-15
Identity = 51/127 (40.16%), Postives = 71/127 (55.91%), Query Frame = 1


Query: 4   RNSLLKHLRVHVKALPKTNSPSFYVNPFNAIR-YRLVSEEVRGSFLDKSEVTDRVISVVK 63
           R+S+L+HLR+ V   P +   +   N F +I  +   SE       D  ++  RVI +VK
Sbjct: 5   RSSILQHLRLRVSVRPTSLLQN--ENGFKSIGIFNFTSEAAADGGQD--QILSRVIELVK 64

Query: 64  KFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLAVDFI 123
           K+ K + S+VT  A FQ DL LDSLD  E+VMA+EEEF  EIPD +AD++        +I
Sbjct: 65  KYDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATYI 124

Query: 124 ASHPQAK 130
            S    K
Sbjct: 125 LSETPTK 127

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BLAST of Lsi06G006600 vs. TrEMBL
Match: M5W1T8_PRUPE (Acyl carrier protein OS=Prunus persica GN=PRUPE_ppa013239mg PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 6.1e-47
Identity = 100/130 (76.92%), Postives = 114/130 (87.69%), Query Frame = 1


Query: 2   AARNSLLKHLRVHVKALPKTNSPS--FYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRVIS 61
           AAR+++LK+LRV V A+P   S +   +++PFNAIR RL SEEVRG+FLDKSEVTDRVIS
Sbjct: 4   AARSAILKYLRVPVPAVPSNPSSTTPLFLSPFNAIRRRLFSEEVRGTFLDKSEVTDRVIS 63

Query: 62  VVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLAV 121
           VVK FQKVDPSKVTP AHFQNDLGLDSLD VE+VMALEEEF FEIPDNEAD+IN+I LAV
Sbjct: 64  VVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFGFEIPDNEADKINSIGLAV 123

Query: 122 DFIASHPQAK 130
           DFI+SHPQAK
Sbjct: 124 DFISSHPQAK 133

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BLAST of Lsi06G006600 vs. TrEMBL
Match: W9RQC9_9ROSA (Acyl carrier protein OS=Morus notabilis GN=L484_005582 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.3e-46
Identity = 101/131 (77.10%), Postives = 114/131 (87.02%), Query Frame = 1


Query: 1   MAARNSLLKHLRVHVKALPKTNSP--SFYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRVI 60
           MAAR  LLKHLRV V+A+P+  S   S  ++ F+A+R R  SEEVRGSFLDKSEVTDRVI
Sbjct: 1   MAARGLLLKHLRVQVQAVPQNPSSTGSLLLSSFHALRRRFFSEEVRGSFLDKSEVTDRVI 60

Query: 61  SVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLA 120
           SVVK FQKVDP+KVTP AHFQNDLGLDSLD VE+VMALEEEFRFEIPDNEAD+I++I+LA
Sbjct: 61  SVVKNFQKVDPAKVTPIAHFQNDLGLDSLDAVELVMALEEEFRFEIPDNEADKISSISLA 120

Query: 121 VDFIASHPQAK 130
           VDFIASHPQAK
Sbjct: 121 VDFIASHPQAK 131

[Close]

BLAST of Lsi06G006600 vs. TrEMBL
Match: B9IQ34_POPTR (Acyl carrier protein OS=Populus trichocarpa GN=POPTR_0019s08300g PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 9.7e-45
Identity = 97/132 (73.48%), Postives = 115/132 (87.12%), Query Frame = 1


Query: 1   MAARNSLLKHLRVHVKALPKTNSPS---FYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRV 60
           MAAR +LLK+LRV V+A+P T +P+        FN+IR R  SEEVRG+FLDKSEVTDRV
Sbjct: 1   MAARGALLKYLRVKVQAMPTTRNPNNNGLVGLSFNSIRRRF-SEEVRGTFLDKSEVTDRV 60

Query: 61  ISVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINL 120
           ++VVK FQKVDPSKVTP AHFQNDLGLDSLD+VE+VMALEEEF+FEIPDNEAD+IN+I+L
Sbjct: 61  VNVVKNFQKVDPSKVTPDAHFQNDLGLDSLDSVEIVMALEEEFQFEIPDNEADKINSISL 120

Query: 121 AVDFIASHPQAK 130
           A+DFI+SHPQAK
Sbjct: 121 AIDFISSHPQAK 131

[Close]

BLAST of Lsi06G006600 vs. TrEMBL
Match: A9PBC4_POPTR (Acyl carrier protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.6e-44
Identity = 97/132 (73.48%), Postives = 114/132 (86.36%), Query Frame = 1


Query: 1   MAARNSLLKHLRVHVKALPKTNSPS---FYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRV 60
           MAAR +LLK+LRV V+A+P T +P+        FN+IR R  SEEVRG+FLDKSEVTDRV
Sbjct: 1   MAARGALLKYLRVKVQAMPTTRNPNNNGLVGLSFNSIRRRF-SEEVRGTFLDKSEVTDRV 60

Query: 61  ISVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINL 120
           ++VVK FQKVDPSKVTP AHFQNDLGLDSLD+VE+VMALEEEF+FEIPDNEAD IN+I+L
Sbjct: 61  VNVVKNFQKVDPSKVTPDAHFQNDLGLDSLDSVEIVMALEEEFQFEIPDNEADNINSISL 120

Query: 121 AVDFIASHPQAK 130
           A+DFI+SHPQAK
Sbjct: 121 AIDFISSHPQAK 131

[Close]

BLAST of Lsi06G006600 vs. TrEMBL
Match: E6Y2N3_TRISB (Acyl carrier protein OS=Triadica sebifera GN=acp PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.2e-44
Identity = 102/132 (77.27%), Postives = 114/132 (86.36%), Query Frame = 1


Query: 1   MAARNSLLKHLRVHVKAL---PKTNSPSFYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRV 60
           MAAR +LLK+LR++V+ +   P+ NS  F ++ FN+I  R  SEEVRGSFLDKSEVTDRV
Sbjct: 1   MAARGALLKYLRINVQTVSQSPRPNSGLFALS-FNSI-VRRFSEEVRGSFLDKSEVTDRV 60

Query: 61  ISVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINL 120
           ISVVK FQKVDPSKVTP AHFQNDLGL SLDTVEVVMALEEEF FEIPDNEAD+IN+INL
Sbjct: 61  ISVVKNFQKVDPSKVTPNAHFQNDLGLGSLDTVEVVMALEEEFGFEIPDNEADKINSINL 120

Query: 121 AVDFIASHPQAK 130
           AVDFIASHPQAK
Sbjct: 121 AVDFIASHPQAK 130

[Close]

BLAST of Lsi06G006600 vs. TAIR10
Match: AT1G65290.1 (AT1G65290.1 mitochondrial acyl carrier protein 2)

HSP 1 Score: 177.2 bits (448), Expect = 6.6e-45
Identity = 96/129 (74.42%), Postives = 109/129 (84.50%), Query Frame = 1


Query: 1   MAARNSLLKHLRVHVKALPKTNSPSFYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRVISV 60
           MAAR ++L++LRV+V   P   +P   V PF+ I  R  SEEVRGSFLDKSEVTDRV+SV
Sbjct: 1   MAARGAMLRYLRVNVN--PTIQNPRECVLPFS-ILLRRFSEEVRGSFLDKSEVTDRVLSV 60

Query: 61  VKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLAVD 120
           VK FQKVDPSKVTP A+FQNDLGLDSLD+VEVVMALEEEF FEIPDNEAD+I +I+LAVD
Sbjct: 61  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 120

Query: 121 FIASHPQAK 130
           FIASHPQAK
Sbjct: 121 FIASHPQAK 126

[Close]

BLAST of Lsi06G006600 vs. TAIR10
Match: AT2G44620.1 (AT2G44620.1 mitochondrial acyl carrier protein 1)

HSP 1 Score: 127.9 bits (320), Expect = 4.6e-30
Identity = 64/128 (50.00%), Postives = 86/128 (67.19%), Query Frame = 1


Query: 1   MAARNSLLKHLRVHVKALPKTNSPSFYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRVISV 60
           MA RN++L+HLRV V+ L    S   ++    +              L +  V DRV+ V
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIGFLGTIRSF-------SSHDDHLSREAVVDRVLDV 60

Query: 61  VKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLAVD 120
           VK F KVDPSKVTP  HFQNDLGLDSLDTVE+VMA+EEEF+ EIPD EAD+I++ +LA++
Sbjct: 61  VKSFPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIE 120

Query: 121 FIASHPQA 129
           ++ +HP +
Sbjct: 121 YVYNHPMS 121

[Close]

BLAST of Lsi06G006600 vs. TAIR10
Match: AT5G47630.1 (AT5G47630.1 mitochondrial acyl carrier protein 3)

HSP 1 Score: 84.0 bits (206), Expect = 7.6e-17
Identity = 51/127 (40.16%), Postives = 71/127 (55.91%), Query Frame = 1


Query: 4   RNSLLKHLRVHVKALPKTNSPSFYVNPFNAIR-YRLVSEEVRGSFLDKSEVTDRVISVVK 63
           R+S+L+HLR+ V   P +   +   N F +I  +   SE       D  ++  RVI +VK
Sbjct: 5   RSSILQHLRLRVSVRPTSLLQN--ENGFKSIGIFNFTSEAAADGGQD--QILSRVIELVK 64

Query: 64  KFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLAVDFI 123
           K+ K + S+VT  A FQ DL LDSLD  E+VMA+EEEF  EIPD +AD++        +I
Sbjct: 65  KYDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATYI 124

Query: 124 ASHPQAK 130
            S    K
Sbjct: 125 LSETPTK 127

[Close]

BLAST of Lsi06G006600 vs. TAIR10
Match: AT3G05020.1 (AT3G05020.1 acyl carrier protein 1)

HSP 1 Score: 58.2 bits (139), Expect = 4.5e-09
Identity = 32/89 (35.96%), Postives = 48/89 (53.93%), Query Frame = 1


Query: 34  IRYRLVSEEVRGSFLDKSEVTDRVISVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVV 93
           +R  + S  +  S   K E  ++V ++VKK   + P K         DLG DSLDTVE+V
Sbjct: 41  LRRSIPSRRLSVSCAAKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIV 100

Query: 94  MALEEEFRFEIPDNEADRINAINLAVDFI 123
           M LEEEF  ++ + +A +I  +  A + I
Sbjct: 101 MGLEEEFNIQMAEEKAQKIATVEQAAELI 129

[Close]

BLAST of Lsi06G006600 vs. TAIR10
Match: AT5G27200.1 (AT5G27200.1 acyl carrier protein 5)

HSP 1 Score: 57.0 bits (136), Expect = 1.0e-08
Identity = 41/111 (36.94%), Postives = 54/111 (48.65%), Query Frame = 1


Query: 20  KTNSPSFYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRVISVVKK-FQKVDPSKVTPTAHF 79
           KTN+ SF +        RL+   +  S   K E  ++V  +VKK     D  KVT    F
Sbjct: 35  KTNNLSFSLR-------RLMPARLAVSCAVKQETVEKVSEIVKKQLSLTDDQKVTAGTKF 94

Query: 80  QNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLAVDFIASHPQAK 130
             +LG DSLDTVE+VM LEEEF   + +  A  I  +  A + I    Q K
Sbjct: 95  -TELGADSLDTVEIVMGLEEEFGITMAEERAKEIATVQQAAELIEELVQEK 137

[Close]

BLAST of Lsi06G006600 vs. NCBI nr
Match: gi|595830791|ref|XP_007206137.1| (hypothetical protein PRUPE_ppa013239mg [Prunus persica])

HSP 1 Score: 194.9 bits (494), Expect = 8.7e-47
Identity = 100/130 (76.92%), Postives = 114/130 (87.69%), Query Frame = 1


Query: 2   AARNSLLKHLRVHVKALPKTNSPS--FYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRVIS 61
           AAR+++LK+LRV V A+P   S +   +++PFNAIR RL SEEVRG+FLDKSEVTDRVIS
Sbjct: 4   AARSAILKYLRVPVPAVPSNPSSTTPLFLSPFNAIRRRLFSEEVRGTFLDKSEVTDRVIS 63

Query: 62  VVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLAV 121
           VVK FQKVDPSKVTP AHFQNDLGLDSLD VE+VMALEEEF FEIPDNEAD+IN+I LAV
Sbjct: 64  VVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFGFEIPDNEADKINSIGLAV 123

Query: 122 DFIASHPQAK 130
           DFI+SHPQAK
Sbjct: 124 DFISSHPQAK 133

[Close]

BLAST of Lsi06G006600 vs. NCBI nr
Match: gi|703116829|ref|XP_010101233.1| (Acyl carrier protein 2 [Morus notabilis])

HSP 1 Score: 193.7 bits (491), Expect = 1.9e-46
Identity = 101/131 (77.10%), Postives = 114/131 (87.02%), Query Frame = 1


Query: 1   MAARNSLLKHLRVHVKALPKTNSP--SFYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRVI 60
           MAAR  LLKHLRV V+A+P+  S   S  ++ F+A+R R  SEEVRGSFLDKSEVTDRVI
Sbjct: 1   MAARGLLLKHLRVQVQAVPQNPSSTGSLLLSSFHALRRRFFSEEVRGSFLDKSEVTDRVI 60

Query: 61  SVVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLA 120
           SVVK FQKVDP+KVTP AHFQNDLGLDSLD VE+VMALEEEFRFEIPDNEAD+I++I+LA
Sbjct: 61  SVVKNFQKVDPAKVTPIAHFQNDLGLDSLDAVELVMALEEEFRFEIPDNEADKISSISLA 120

Query: 121 VDFIASHPQAK 130
           VDFIASHPQAK
Sbjct: 121 VDFIASHPQAK 131

[Close]

BLAST of Lsi06G006600 vs. NCBI nr
Match: gi|1009118251|ref|XP_015875758.1| (PREDICTED: acyl carrier protein 2, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-45
Identity = 98/130 (75.38%), Postives = 115/130 (88.46%), Query Frame = 1


Query: 3   ARNSLLKHLRVHVKALPK---TNSPSFYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRVIS 62
           ARN+LLK+LRV V+A+P+   T S S ++N FNA+R    +EEVRGSFLDKSEVT+RVI+
Sbjct: 5   ARNALLKYLRVQVEAVPRNPSTTSSSVFLNSFNALRRHFSTEEVRGSFLDKSEVTERVIT 64

Query: 63  VVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLAV 122
           VVK FQKVDPSKVTP A+FQ+DLGLDSLD+VEVVMALEEEF FEIPDNEAD+IN+I+LAV
Sbjct: 65  VVKNFQKVDPSKVTPNANFQSDLGLDSLDSVEVVMALEEEFGFEIPDNEADKINSISLAV 124

Query: 123 DFIASHPQAK 130
           DFIASHPQAK
Sbjct: 125 DFIASHPQAK 134

[Close]

BLAST of Lsi06G006600 vs. NCBI nr
Match: gi|694323550|ref|XP_009352839.1| (PREDICTED: acyl carrier protein 2, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-44
Identity = 96/130 (73.85%), Postives = 114/130 (87.69%), Query Frame = 1


Query: 2   AARNSLLKHLRVHVKALPKTNSPS--FYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRVIS 61
           +ARN LLKHLRV V+A+P   S +   +++PF AIR RL+SEEVRG+FLDKSEVTDRV+S
Sbjct: 4   SARNVLLKHLRVQVQAVPSNPSSTAPLFLSPFAAIRRRLLSEEVRGTFLDKSEVTDRVVS 63

Query: 62  VVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLAV 121
           VVK FQKVDPSKVTP A+F++DLGLDSLD VE+VMALEEEF FEIPDNEAD+I +I+LAV
Sbjct: 64  VVKNFQKVDPSKVTPNANFESDLGLDSLDYVEIVMALEEEFGFEIPDNEADKIKSIDLAV 123

Query: 122 DFIASHPQAK 130
           DFI+SHPQAK
Sbjct: 124 DFISSHPQAK 133

[Close]

BLAST of Lsi06G006600 vs. NCBI nr
Match: gi|657958634|ref|XP_008370844.1| (PREDICTED: acyl carrier protein 2, mitochondrial [Malus domestica])

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-44
Identity = 96/130 (73.85%), Postives = 113/130 (86.92%), Query Frame = 1


Query: 2   AARNSLLKHLRVHVKALPKTNSPS--FYVNPFNAIRYRLVSEEVRGSFLDKSEVTDRVIS 61
           +ARN LLKHLRV V+A+P   S +   +++PF AIR RL SEEVRG+FLDKSEVTDRV+S
Sbjct: 4   SARNVLLKHLRVQVQAVPSNPSSTAPLFLSPFAAIRRRLFSEEVRGTFLDKSEVTDRVVS 63

Query: 62  VVKKFQKVDPSKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNEADRINAINLAV 121
           VVK FQKVDPSKVTP A+F++DLGLDSLD+VE+VMALEEEF FEIPDNEAD+I +I LAV
Sbjct: 64  VVKNFQKVDPSKVTPNANFESDLGLDSLDSVEIVMALEEEFGFEIPDNEADKIKSIGLAV 123

Query: 122 DFIASHPQAK 130
           DFI+SHPQAK
Sbjct: 124 DFISSHPQAK 133

The following BLAST results are available for this feature:

BLAST of Lsi06G006600 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ACPM2_ARATH	1.2e-43	74.42	Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=...	[more]
ACPM1_ARATH	8.2e-29	50.00	Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=...	[more]
ACPM_NEUCR	3.7e-21	50.43	Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74...	[more]
ACPM_SCHPO	6.5e-18	53.09	Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strai...	[more]
ACPM3_ARATH	1.4e-15	40.16	Acyl carrier protein 3, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=2 SV=...	[more]

BLAST of Lsi06G006600 vs. TrEMBL


Match Name	E-value	Identity	Description
M5W1T8_PRUPE	6.1e-47	76.92	Acyl carrier protein OS=Prunus persica GN=PRUPE_ppa013239mg PE=3 SV=1	[more]
W9RQC9_9ROSA	1.3e-46	77.10	Acyl carrier protein OS=Morus notabilis GN=L484_005582 PE=3 SV=1	[more]
B9IQ34_POPTR	9.7e-45	73.48	Acyl carrier protein OS=Populus trichocarpa GN=POPTR_0019s08300g PE=3 SV=1	[more]
A9PBC4_POPTR	1.6e-44	73.48	Acyl carrier protein OS=Populus trichocarpa PE=2 SV=1	[more]
E6Y2N3_TRISB	2.2e-44	77.27	Acyl carrier protein OS=Triadica sebifera GN=acp PE=2 SV=1	[more]

BLAST of Lsi06G006600 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65290.1	6.6e-45	74.42	mitochondrial acyl carrier protein 2	[more]
AT2G44620.1	4.6e-30	50.00	mitochondrial acyl carrier protein 1	[more]
AT5G47630.1	7.6e-17	40.16	mitochondrial acyl carrier protein 3	[more]
AT3G05020.1	4.5e-09	35.96	acyl carrier protein 1	[more]
AT5G27200.1	1.0e-08	36.94	acyl carrier protein 5	[more]

BLAST of Lsi06G006600 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|595830791\|ref\|XP_007206137.1\|	8.7e-47	76.92	hypothetical protein PRUPE_ppa013239mg [Prunus persica]	[more]
gi\|703116829\|ref\|XP_010101233.1\|	1.9e-46	77.10	Acyl carrier protein 2 [Morus notabilis]	[more]
gi\|1009118251\|ref\|XP_015875758.1\|	1.6e-45	75.38	PREDICTED: acyl carrier protein 2, mitochondrial [Ziziphus jujuba]	[more]
gi\|694323550\|ref\|XP_009352839.1\|	1.1e-44	73.85	PREDICTED: acyl carrier protein 2, mitochondrial-like [Pyrus x bretschneideri]	[more]
gi\|657958634\|ref\|XP_008370844.1\|	1.1e-44	73.85	PREDICTED: acyl carrier protein 2, mitochondrial [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006633	fatty acid biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR009081	PP-bd_ACP
IPR006162	Ppantetheine_attach_site
IPR003231	Acyl_carrier

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0042335	cuticle development
biological_process	GO:0009409	response to cold
biological_process	GO:0000038	very long-chain fatty acid metabolic process
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0031177	phosphopantetheine binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G006600.1	Lsi06G006600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003231	Acyl carrier protein (ACP)	PRODOM	PD000887		coord: 90..125 score: 9.0
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 52..126 score: 17
IPR003231	Acyl carrier protein (ACP)	TIGRFAMs	TIGR00517	TIGR00517	coord: 51..125 score: 1.8
IPR006162	Phosphopantetheine attachment site	PROSITE	PS00012	PHOSPHOPANTETHEINE	coord: 81..96 scor
IPR009081	Phosphopantetheine binding ACP domain	GENE3D	G3DSA:1.10.1200.10		coord: 39..129 score: 1.4
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 55..110 score: 5.2
IPR009081	Phosphopantetheine binding ACP domain	PROFILE	PS50075	ACP_DOMAIN	coord: 53..123 score: 14
IPR009081	Phosphopantetheine binding ACP domain	unknown	SSF47336	ACP-like	coord: 49..125 score: 1.83
None	No IPR available	PANTHER	PTHR20863	ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED	coord: 1..129 score: 4.6
None	No IPR available	PANTHER	PTHR20863:SF30	SUBFAMILY NOT NAMED	coord: 1..129 score: 4.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G006600	CmaCh10G008480	Cucurbita maxima (Rimu)	cmalsiB073
Lsi06G006600	CmaCh11G009200	Cucurbita maxima (Rimu)	cmalsiB128
Lsi06G006600	CmoCh10G008830	Cucurbita moschata (Rifu)	cmolsiB059
Lsi06G006600	CmoCh11G009420	Cucurbita moschata (Rifu)	cmolsiB118
Lsi06G006600	Cla002179	Watermelon (97103) v1	lsiwmB395
Lsi06G006600	ClCG03G011640	Watermelon (Charleston Gray)	lsiwcgB364
Lsi06G006600	Cla97C03G061940	Watermelon (97103) v2	lsiwmbB365
Lsi06G006600	Bhi02G001150	Wax gourd	lsiwgoB514
Lsi06G006600	Cp4.1LG18g02350	Cucurbita pepo (Zucchini)	cpelsiB299
Lsi06G006600	Cp4.1LG00g01400	Cucurbita pepo (Zucchini)	cpelsiB017
Lsi06G006600	Carg22710	Silver-seed gourd	carlsiB485
Lsi06G006600	Carg17815	Silver-seed gourd	carlsiB886

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G006600	Cucumber (Gy14) v1	cgylsiB573
Lsi06G006600	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G006600	Cucumber (Chinese Long) v2	culsiB058
Lsi06G006600	Melon (DHL92) v3.5.1	lsimeB398
Lsi06G006600	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G006600	Melon (DHL92) v3.6.1	lsimedB420
Lsi06G006600	Cucumber (Chinese Long) v3	cuclsiB068
Lsi06G006600	Wax gourd	lsiwgoB521