Cp4.1LG00g01400 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG00g01400
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAcyl carrier protein
LocationCp4.1LG00 : 3699008 .. 3703091 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAAAAAAATATTATTATACGCTTCTCTTGCTTCGTTCGTTGCTCTGCGTCAAAAACCGCATAAAACCTCTCTCACGAGAAGCCATTTCTTCGAGCTCTCGAAACTGCATATATCAGTTCCAATGGCGGCGAGGAATTCTCTACTGAAGTATATTAGGGTTCACGTACAGGCCCTGCCCAAATCCAACACCCCCATTCTCTATGTCCACCCCTTCAATGCGATTCGACGCCGTCTCTTCTCCGAGGAGGTGAGGGGTTCTTTTCTTGACAAATCGGAAGTCGCTGACCGCGTCATTTCCGTTGTCAAGAAATTTCAGAAAGTCGATCCTTGCAAGGTATGAGAAATATTCTATTCCTTTCATGATTGATTTAATTTAATGTGTCCGATATCAAATTACGCAATTAAGTTTCTGTGAGCTACGCTTCGCGTTTGCAGTGGCTTTCTGTTAGTTTAATAACTTTGAAATTTAGGGTTGATTTGGTTTGTGATCTACTAGTGAGAACGTATTGTGTGTTTTCATTGTACTTGCAAATTAGGGATATGTATCTATTAAAAATATATTGAAATAGGATGCGTTCCTCAATAGAAGTTGTTAGATGAACACGACTCTTCACAATGGTAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCTACAAAAGGTCTCATACCAATGGAGATAGTATTCTTTGATTATAAACTCATGATCATTCCCTTAATTAACTGATGTGGGACTTTCATCATCCAACACCTCCCCTCGAACAAAGTACGCCTCCCCTTAATCAAGACTCAACTCCTTTGGAGTCTTAGTCATTTTTTACTATGCCCTCGAGGAGACTTGACTCCTTTTCTTTTGGAGTCGTTTGTTCGATATTTGAGGATTTACCAATCTATTGGCACAACTAAGTTTAGGGCATTGCTTGATACCATGTTAGATGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATACCAATGGAGATAGTATTCTTTGACTATAAACCCATGATCATTCCTTAAATTAACCGATGTGGGACTTTCATCATCCAACAGAAGTATGGTTGAATCCATTAAACGAAGTATATTTTCTTACCCCCAATGGAACCTCAACTCTCAGCCTTCATGCTATTCCTCTTCGGCAGATTCTTCTTCCAGTGAAGTTTTTCATTTGTAGATATCATTAACTAACATGGGCTTGCATGATTTGGAAATGTGTTTGAGCATTTATGTTAGATTTGGTATACAACTTCGAAAGCTTCATCTTTTACTGAAACTCTTAATTTTGAAGAGGTTACAAACAATAACTCAAGTCCCATTAATGACATTTAAATGACCGATGAATCTTCGATTCAAATTTTGTTTGAACATGCCCCTTCTGTGGGTTTCAAAACACCTTCTGAAGCTTCCCTGAAGGCTTTTGAGTCTACCTATCATTATCTTATTCTCGAAAATTTTGGCTTTATTCTTCATTTCATTCGTTCATTGAGGATAATTCTTTGAATACTGATTTAATCGAAGAAAGTTGTTCAAGTCTTTTAGCCCCCCATATGAAGCAAGTTGCCTCTTCACCTCCTTATCCTTCACATTTTTTGCTTCCCAATACTTGCAACCAAAATGTTTTATCCCCTTTGAATCCAGATTCTTTATTAACTAGAGGAGTTCTCCACTTGACAAAATACCATGCTCCTCTTTCACATGATTCTGATTCCAACGTTAGCATTAAAAAGTGTTGAATCAGTTATGGAGCCTAACTTGGAGGATGTTGTTCTTGAAGATCTTATTTTGAAGCTTTTGGTTCATTATTTTAAGAAAATGACAATGATACTCTTCCTCTTCCTTTATAAATTCTATTGTTCCCTCAATTCAAATACCCCACAACAACTTGTTTGTCACACCACTTTGCCCTTCAACCTAAAGGGAAGATTCAGATGCACCTCCCCCATCATAGACCTCCCATATCCGTGTGCACCTCACAAGCCTCGAATGGACTCTTCCAACGCCTCTAAAGGTAAAGAGAAAATTGGTAAGTTTACAACAAATGATTAAGACTCTCCTCGTTCCTCCGGTAAAGAATGAACCATTACAGTTACACACAGGAAAATAGAAGGAGAAATCCTTTTTTTTTTTTTTGAATTGTCTGCTGTCATGTGGATTTTCTTTTTCATCCTTTCTTAAATTGTAGGATCTCAGTTATTCATATGAAAATACTTGTTTAGGTAGACTACCAGGTGCATTTGAAACTCGCATAGAAATTTTAAGCACTGCATTCATTTCTATCTTTCTTTCTTCTTTTTTCACGAGTTGATAATGCATATTATACATTCTCTGCCAGGTTACTCCAACGGCCCATTTTCAAAATGATTTAGGATTGGACAGTTTAGATACTGTGGAGGTTGTGATGGCTCTTGAAGAAGAGTTCCGTTTTGAAATTCCTGATAATGAATCAGACAAAATCAATGCTATCAATCTTGCTGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAGACGAAAGCTGCACGTGCTTTCACTCGGGTTTCTCCTATCTTGACGAGATATTAGGTACCGTTAGATTTCCCTTATTTATCCCACTGTATTTTTATTTCGCTCGAAACTGGGTTGAGCCAGCTTCAAGCTGCATAAGTTGAGGCAAACTGTTATTGGCTAAAATGGATCAACTGAGCCTATATTTCAATAATGATTTGATGAGATTCTCCCGTTAACTTATTTGTGAACTAGTTCAACATGCATTATTTAAGATAAAAATTCACTTTTTATCCAGATCTTACAAGCTTGAATTAGTGTGAACTTAACATCTGCAATTGGTTAAGCATATATTATCATGAAGATTTGTATTTAGTTCGGGACGTTTTCGTGGTTGGATTAGTAGATTTTGTGGGTTTTGGTTTTTCATGTTGTTGGATGTTCTTTTGCTAAGTTTGTTGCTTTTTTTTCCTACTTGATTTTGTGGCTAGGTTCACGTATTTGTGTAGCTGTATTAAGTATTTTAATGGCTAGATAAATTTTGAGTGATATATTGGTCATTCAAGTTTAGTGTTGAATTATACAAAGGGAAAATGATTTTTCCCATTATCCTTATTCTCATTTTGATTAGGGTATTATAGAGGTTGATGGGTAATATATTATATGAAAGGTTTTGAGAATGACTGAATTGTCATAGCTCAAACGTGTCGTGTCGGTGAGTTGTCATAGCTCAAACATGACTAAAATGCATTTTTAGTACGTGACTAAACCCGTGTAACTTACCTTAAAGTGCTCCCAAAACTAACCTCAACTCGATTTCTAAATTGTTTCCAATATCAATCTTTCAATCTGCAGTGAACAGTTGGTTGGTGAGGGAGATGCATAACTATAATCCATTGGGAATATGAATCCATCAAATGTTCAAAGAAAAAGAAAGCATGTAAAAGCAAGTGTGTACTGTCATTGCTCATATTCAAATATCCCTGCCCCAAACATCTATATACAGAACCATTTCCCAAACTATCTTTGCAGGAAGAAGAATAAGAATATTGTTGAATTGCTTCTTCTTCCATAGGACTGACTTAACAGTACACAAAATCATTAAATTACGAGAGTCAAATAAGTAACAGTTGTGGATACTCTCTCTTCCTTGCAATATATAAACTTAAAAAGAGGCGAGTCTTCAGCTGGTTCTTACAGCATCAATGGCATGAACCAAATCATCATACTTTGCTCCTGTTACTTCTTTAACTACCATTTTATTCTTCAGAATTTTGAATGTCGGCACCACTTTTATCCCAAGTTCCTTTGCCAATGGCTGCCAAATAAATCACCATAAGAGAGAGAAAGCTAAGTGTTCTTCCATATGCATATACATTCCTAAGCTCCAGCAAGAGAGTAGGGATCATGGAACCAACCTTATTGTCTTGGTTGCAGTCAAGCTTTAGAAAGATAACGTCAAGATATTTCTCAGATAATTCTTGAAATTTGGGAGCCATCACTTTGCAGGGTCCACACCTT

mRNA sequence

GGAAAAAAATATTATTATACGCTTCTCTTGCTTCGTTCGTTGCTCTGCGTCAAAAACCGCATAAAACCTCTCTCACGAGAAGCCATTTCTTCGAGCTCTCGAAACTGCATATATCAGTTCCAATGGCGGCGAGGAATTCTCTACTGAAGTATATTAGGGTTCACGTACAGGCCCTGCCCAAATCCAACACCCCCATTCTCTATGTCCACCCCTTCAATGCGATTCGACGCCGTCTCTTCTCCGAGGAGGTGAGGGGTTCTTTTCTTGACAAATCGGAAGTCGCTGACCGCGTCATTTCCGTTGTCAAGAAATTTCAGAAAGTCGATCCTTGCAAGGTTACTCCAACGGCCCATTTTCAAAATGATTTAGGATTGGACAGTTTAGATACTGTGGAGGTTGTGATGGCTCTTGAAGAAGAGTTCCGTTTTGAAATTCCTGATAATGAATCAGACAAAATCAATGCTATCAATCTTGCTGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAGACGAAAGCTGCACGTGCTTTCACTCGGGTTTCTCCTATCTTGACGAGATATTAGTGAACAGTTGGTTGGTGAGGGAGATGCATAACTATAATCCATTGGGAATATGAATCCATCAAATGTTCAAAGAAAAAGAAAGCATGTAAAAGCAAGTGTGTACTGTCATTGCTCATATTCAAATATCCCTGCCCCAAACATCTATATACAGAACCATTTCCCAAACTATCTTTGCAGGAAGAAGAATAAGAATATTGTTGAATTGCTTCTTCTTCCATAGGACTGACTTAACAGTACACAAAATCATTAAATTACGAGAGTCAAATAAGTAACAGTTGTGGATACTCTCTCTTCCTTGCAATATATAAACTTAAAAAGAGGCGAGTCTTCAGCTGGTTCTTACAGCATCAATGGCATGAACCAAATCATCATACTTTGCTCCTGTTACTTCTTTAACTACCATTTTATTCTTCAGAATTTTGAATGTCGGCACCACTTTTATCCCAAGTTCCTTTGCCAATGGCTGCCAAATAAATCACCATAAGAGAGAGAAAGCTAAGTGTTCTTCCATATGCATATACATTCCTAAGCTCCAGCAAGAGAGTAGGGATCATGGAACCAACCTTATTGTCTTGGTTGCAGTCAAGCTTTAGAAAGATAACGTCAAGATATTTCTCAGATAATTCTTGAAATTTGGGAGCCATCACTTTGCAGGGTCCACACCTT

Coding sequence (CDS)

ATGGCGGCGAGGAATTCTCTACTGAAGTATATTAGGGTTCACGTACAGGCCCTGCCCAAATCCAACACCCCCATTCTCTATGTCCACCCCTTCAATGCGATTCGACGCCGTCTCTTCTCCGAGGAGGTGAGGGGTTCTTTTCTTGACAAATCGGAAGTCGCTGACCGCGTCATTTCCGTTGTCAAGAAATTTCAGAAAGTCGATCCTTGCAAGGTTACTCCAACGGCCCATTTTCAAAATGATTTAGGATTGGACAGTTTAGATACTGTGGAGGTTGTGATGGCTCTTGAAGAAGAGTTCCGTTTTGAAATTCCTGATAATGAATCAGACAAAATCAATGCTATCAATCTTGCTGTTGATTTTATTGCCTCTCACCCTCAAGCAAAATAG

Protein sequence

MAARNSLLKYIRVHVQALPKSNTPILYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVDFIASHPQAK
Homology
[Close]
BLAST of Cp4.1LG00g01400 vs. Swiss-Prot
Match: ACPM2_ARATH (Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 6.9e-44
Identity = 95/129 (73.64%), Postives = 108/129 (83.72%), Query Frame = 1 

Query: 1   MAARNSLLKYIRVHVQALPKSNTPILYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 60
           MAAR ++L+Y+RV+V   P    P   V PF+ + RR FSEEVRGSFLDKSEV DRV+SV
Sbjct: 1   MAARGAMLRYLRVNVN--PTIQNPRECVLPFSILLRR-FSEEVRGSFLDKSEVTDRVLSV 60

Query: 61  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 120
           VK FQKVDP KVTP A+FQNDLGLDSLD+VEVVMALEEEF FEIPDNE+DKI +I+LAVD
Sbjct: 61  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 120

Query: 121 FIASHPQAK 130
           FIASHPQAK
Sbjct: 121 FIASHPQAK 126

[Close]
BLAST of Cp4.1LG00g01400 vs. Swiss-Prot
Match: ACPM1_ARATH (Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.4e-28
Identity = 65/128 (50.78%), Postives = 89/128 (69.53%), Query Frame = 1 

Query: 1   MAARNSLLKYIRVHVQALPKSNTPILYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 60
           MA RN++L+++RV VQ L  + + I ++        R FS       L +  V DRV+ V
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIGFLGTI-----RSFSSH--DDHLSREAVVDRVLDV 60

Query: 61  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 120
           VK F KVDP KVTP  HFQNDLGLDSLDTVE+VMA+EEEF+ EIPD E+DKI++ +LA++
Sbjct: 61  VKSFPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIE 120

Query: 121 FIASHPQA 129
           ++ +HP +
Sbjct: 121 YVYNHPMS 121

[Close]
BLAST of Cp4.1LG00g01400 vs. Swiss-Prot
Match: ACPM_NEUCR (Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-12 PE=1 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-20
Identity = 59/115 (51.30%), Postives = 75/115 (65.22%), Query Frame = 1 

Query: 15  VQALPKSNTPILYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISVVKKFQKV-DPCKVT 74
           VQA+PK       V  F A+R   +S    G  L K EV  R+  V+  F KV DP  +T
Sbjct: 31  VQAVPK-------VAAFQAVR--FYSA---GGHLKKDEVFSRIAQVLSGFDKVNDPKNIT 90

Query: 75  PTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVDFIASHPQA 129
            TAHF NDLGLDSLDTVEVVMA+EEEF  EIPD ++D+I++++ AV++I S P A
Sbjct: 91  ETAHFANDLGLDSLDTVEVVMAIEEEFSIEIPDKDADQIHSVDKAVEYILSQPDA 133

[Close]
BLAST of Cp4.1LG00g01400 vs. Swiss-Prot
Match: ACPM_SCHPO (Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4H3.09 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-17
Identity = 42/81 (51.85%), Postives = 59/81 (72.84%), Query Frame = 1 

Query: 50  KSEVADRVISVVKKFQKV-DPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNE 109
           + +   R++ VV  F K+ DP KVTPT+ F NDLGLDSLD VEVVMA+EEEF  +IPD +
Sbjct: 32  RPDAEKRILKVVSSFDKIQDPKKVTPTSTFANDLGLDSLDAVEVVMAIEEEFSIQIPDKD 91

Query: 110 SDKINAINLAVDFIASHPQAK 130
           +D+I ++  A+ +I  +P+AK
Sbjct: 92  ADEITSVGDAISYITKNPEAK 112

[Close]
BLAST of Cp4.1LG00g01400 vs. Swiss-Prot
Match: ACP_LEUMU (Acyl carrier protein OS=Leucothrix mucor GN=acpP PE=1 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 6.7e-15
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 1 

Query: 51  SEVADRVISVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESD 110
           S++  RV +VV +   VD  +VT  A F +DLG DSLDTVE+VMALEEEF  EIPD E++
Sbjct: 2   SDIEQRVKNVVVEQLGVDEAEVTNAASFVDDLGADSLDTVELVMALEEEFGTEIPDEEAE 61

Query: 111 KINAINLAVDFIASH 126
           KI  + LA+D++ SH
Sbjct: 62  KITTVQLAIDYVKSH 76

[Close]
BLAST of Cp4.1LG00g01400 vs. TrEMBL
Match: M5W1T8_PRUPE (Acyl carrier protein OS=Prunus persica GN=PRUPE_ppa013239mg PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.4e-48
Identity = 102/130 (78.46%), Postives = 115/130 (88.46%), Query Frame = 1 

Query: 2   AARNSLLKYIRVHVQALPK--SNTPILYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVIS 61
           AAR+++LKY+RV V A+P   S+T  L++ PFNAIRRRLFSEEVRG+FLDKSEV DRVIS
Sbjct: 4   AARSAILKYLRVPVPAVPSNPSSTTPLFLSPFNAIRRRLFSEEVRGTFLDKSEVTDRVIS 63

Query: 62  VVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAV 121
           VVK FQKVDP KVTP AHFQNDLGLDSLD VE+VMALEEEF FEIPDNE+DKIN+I LAV
Sbjct: 64  VVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFGFEIPDNEADKINSIGLAV 123

Query: 122 DFIASHPQAK 130
           DFI+SHPQAK
Sbjct: 124 DFISSHPQAK 133

[Close]
BLAST of Cp4.1LG00g01400 vs. TrEMBL
Match: W9RQC9_9ROSA (Acyl carrier protein OS=Morus notabilis GN=L484_005582 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.1e-47
Identity = 102/131 (77.86%), Postives = 115/131 (87.79%), Query Frame = 1 

Query: 1   MAARNSLLKYIRVHVQALPK--SNTPILYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVI 60
           MAAR  LLK++RV VQA+P+  S+T  L +  F+A+RRR FSEEVRGSFLDKSEV DRVI
Sbjct: 1   MAARGLLLKHLRVQVQAVPQNPSSTGSLLLSSFHALRRRFFSEEVRGSFLDKSEVTDRVI 60

Query: 61  SVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLA 120
           SVVK FQKVDP KVTP AHFQNDLGLDSLD VE+VMALEEEFRFEIPDNE+DKI++I+LA
Sbjct: 61  SVVKNFQKVDPAKVTPIAHFQNDLGLDSLDAVELVMALEEEFRFEIPDNEADKISSISLA 120

Query: 121 VDFIASHPQAK 130
           VDFIASHPQAK
Sbjct: 121 VDFIASHPQAK 131

[Close]
BLAST of Cp4.1LG00g01400 vs. TrEMBL
Match: E6Y2N3_TRISB (Acyl carrier protein OS=Triadica sebifera GN=acp PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.5e-45
Identity = 102/131 (77.86%), Postives = 112/131 (85.50%), Query Frame = 1 

Query: 1   MAARNSLLKYIRVHVQALPKSNTPI--LYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVI 60
           MAAR +LLKY+R++VQ + +S  P   L+   FN+I RR FSEEVRGSFLDKSEV DRVI
Sbjct: 1   MAARGALLKYLRINVQTVSQSPRPNSGLFALSFNSIVRR-FSEEVRGSFLDKSEVTDRVI 60

Query: 61  SVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLA 120
           SVVK FQKVDP KVTP AHFQNDLGL SLDTVEVVMALEEEF FEIPDNE+DKIN+INLA
Sbjct: 61  SVVKNFQKVDPSKVTPNAHFQNDLGLGSLDTVEVVMALEEEFGFEIPDNEADKINSINLA 120

Query: 121 VDFIASHPQAK 130
           VDFIASHPQAK
Sbjct: 121 VDFIASHPQAK 130

[Close]
BLAST of Cp4.1LG00g01400 vs. TrEMBL
Match: B9IQ34_POPTR (Acyl carrier protein OS=Populus trichocarpa GN=POPTR_0019s08300g PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.5e-45
Identity = 98/132 (74.24%), Postives = 114/132 (86.36%), Query Frame = 1 

Query: 1   MAARNSLLKYIRVHVQALPKSNTPI---LYVHPFNAIRRRLFSEEVRGSFLDKSEVADRV 60
           MAAR +LLKY+RV VQA+P +  P    L    FN+IRRR FSEEVRG+FLDKSEV DRV
Sbjct: 1   MAARGALLKYLRVKVQAMPTTRNPNNNGLVGLSFNSIRRR-FSEEVRGTFLDKSEVTDRV 60

Query: 61  ISVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINL 120
           ++VVK FQKVDP KVTP AHFQNDLGLDSLD+VE+VMALEEEF+FEIPDNE+DKIN+I+L
Sbjct: 61  VNVVKNFQKVDPSKVTPDAHFQNDLGLDSLDSVEIVMALEEEFQFEIPDNEADKINSISL 120

Query: 121 AVDFIASHPQAK 130
           A+DFI+SHPQAK
Sbjct: 121 AIDFISSHPQAK 131

[Close]
BLAST of Cp4.1LG00g01400 vs. TrEMBL
Match: I3RV98_9ERIC (Acyl carrier protein OS=Camellia oleifera GN=ACP PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 5.7e-45
Identity = 100/130 (76.92%), Postives = 113/130 (86.92%), Query Frame = 1 

Query: 1   MAARNSLLKYIRVHVQALPKS-NTPILYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVIS 60
           MAARN+LLKY+RV+V ++P++ N   L +   N +RR  FSEEVRGSFLDKSEVADRVIS
Sbjct: 1   MAARNALLKYLRVNVWSVPQNPNFSPLSLSLSNLVRRH-FSEEVRGSFLDKSEVADRVIS 60

Query: 61  VVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAV 120
           VVK FQKVDP KVTP AHFQNDLGLDSLDTVE+VMA EEEF FEIPDNE+DKI++INLAV
Sbjct: 61  VVKNFQKVDPSKVTPNAHFQNDLGLDSLDTVEIVMAFEEEFGFEIPDNEADKISSINLAV 120

Query: 121 DFIASHPQAK 130
           DFIASHPQAK
Sbjct: 121 DFIASHPQAK 129

[Close]
BLAST of Cp4.1LG00g01400 vs. TAIR10
Match: AT1G65290.1 (AT1G65290.1 mitochondrial acyl carrier protein 2)

HSP 1 Score: 177.9 bits (450), Expect = 3.9e-45
Identity = 95/129 (73.64%), Postives = 108/129 (83.72%), Query Frame = 1 

Query: 1   MAARNSLLKYIRVHVQALPKSNTPILYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 60
           MAAR ++L+Y+RV+V   P    P   V PF+ + RR FSEEVRGSFLDKSEV DRV+SV
Sbjct: 1   MAARGAMLRYLRVNVN--PTIQNPRECVLPFSILLRR-FSEEVRGSFLDKSEVTDRVLSV 60

Query: 61  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 120
           VK FQKVDP KVTP A+FQNDLGLDSLD+VEVVMALEEEF FEIPDNE+DKI +I+LAVD
Sbjct: 61  VKNFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVD 120

Query: 121 FIASHPQAK 130
           FIASHPQAK
Sbjct: 121 FIASHPQAK 126

[Close]
BLAST of Cp4.1LG00g01400 vs. TAIR10
Match: AT2G44620.1 (AT2G44620.1 mitochondrial acyl carrier protein 1)

HSP 1 Score: 126.3 bits (316), Expect = 1.3e-29
Identity = 65/128 (50.78%), Postives = 89/128 (69.53%), Query Frame = 1 

Query: 1   MAARNSLLKYIRVHVQALPKSNTPILYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISV 60
           MA RN++L+++RV VQ L  + + I ++        R FS       L +  V DRV+ V
Sbjct: 1   MALRNAILRHLRVPVQTLGLNQSKIGFLGTI-----RSFSSH--DDHLSREAVVDRVLDV 60

Query: 61  VKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVD 120
           VK F KVDP KVTP  HFQNDLGLDSLDTVE+VMA+EEEF+ EIPD E+DKI++ +LA++
Sbjct: 61  VKSFPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIE 120

Query: 121 FIASHPQA 129
           ++ +HP +
Sbjct: 121 YVYNHPMS 121

[Close]
BLAST of Cp4.1LG00g01400 vs. TAIR10
Match: AT5G47630.1 (AT5G47630.1 mitochondrial acyl carrier protein 3)

HSP 1 Score: 79.0 bits (193), Expect = 2.5e-15
Identity = 47/126 (37.30%), Postives = 70/126 (55.56%), Query Frame = 1 

Query: 4   RNSLLKYIRVHVQALPKSNTPILYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVISVVKK 63
           R+S+L+++R+ V   P S   +   + F +I    F+ E       + ++  RVI +VKK
Sbjct: 5   RSSILQHLRLRVSVRPTSL--LQNENGFKSIGIFNFTSEAAADG-GQDQILSRVIELVKK 64

Query: 64  FQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAVDFIA 123
           + K +  +VT  A FQ DL LDSLD  E+VMA+EEEF  EIPD ++DK+        +I 
Sbjct: 65  YDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDVATYIL 124

Query: 124 SHPQAK 130
           S    K
Sbjct: 125 SETPTK 127

[Close]
BLAST of Cp4.1LG00g01400 vs. TAIR10
Match: AT3G05020.1 (AT3G05020.1 acyl carrier protein 1)

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-09
Identity = 33/89 (37.08%), Postives = 49/89 (55.06%), Query Frame = 1 

Query: 34  IRRRLFSEEVRGSFLDKSEVADRVISVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVV 93
           +RR + S  +  S   K E  ++V ++VKK   + P K         DLG DSLDTVE+V
Sbjct: 41  LRRSIPSRRLSVSCAAKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIV 100

Query: 94  MALEEEFRFEIPDNESDKINAINLAVDFI 123
           M LEEEF  ++ + ++ KI  +  A + I
Sbjct: 101 MGLEEEFNIQMAEEKAQKIATVEQAAELI 129

[Close]
BLAST of Cp4.1LG00g01400 vs. TAIR10
Match: AT5G27200.1 (AT5G27200.1 acyl carrier protein 5)

HSP 1 Score: 55.1 bits (131), Expect = 3.8e-08
Identity = 36/95 (37.89%), Postives = 48/95 (50.53%), Query Frame = 1 

Query: 36  RRLFSEEVRGSFLDKSEVADRVISVVKK-FQKVDPCKVTPTAHFQNDLGLDSLDTVEVVM 95
           RRL    +  S   K E  ++V  +VKK     D  KVT    F  +LG DSLDTVE+VM
Sbjct: 44  RRLMPARLAVSCAVKQETVEKVSEIVKKQLSLTDDQKVTAGTKF-TELGADSLDTVEIVM 103

Query: 96  ALEEEFRFEIPDNESDKINAINLAVDFIASHPQAK 130
            LEEEF   + +  + +I  +  A + I    Q K
Sbjct: 104 GLEEEFGITMAEERAKEIATVQQAAELIEELVQEK 137

[Close]
BLAST of Cp4.1LG00g01400 vs. NCBI nr
Match: gi|595830791|ref|XP_007206137.1| (hypothetical protein PRUPE_ppa013239mg [Prunus persica])

HSP 1 Score: 200.3 bits (508), Expect = 2.1e-48
Identity = 102/130 (78.46%), Postives = 115/130 (88.46%), Query Frame = 1 

Query: 2   AARNSLLKYIRVHVQALPK--SNTPILYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVIS 61
           AAR+++LKY+RV V A+P   S+T  L++ PFNAIRRRLFSEEVRG+FLDKSEV DRVIS
Sbjct: 4   AARSAILKYLRVPVPAVPSNPSSTTPLFLSPFNAIRRRLFSEEVRGTFLDKSEVTDRVIS 63

Query: 62  VVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAV 121
           VVK FQKVDP KVTP AHFQNDLGLDSLD VE+VMALEEEF FEIPDNE+DKIN+I LAV
Sbjct: 64  VVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFGFEIPDNEADKINSIGLAV 123

Query: 122 DFIASHPQAK 130
           DFI+SHPQAK
Sbjct: 124 DFISSHPQAK 133

[Close]
BLAST of Cp4.1LG00g01400 vs. NCBI nr
Match: gi|703116829|ref|XP_010101233.1| (Acyl carrier protein 2 [Morus notabilis])

HSP 1 Score: 196.4 bits (498), Expect = 3.0e-47
Identity = 102/131 (77.86%), Postives = 115/131 (87.79%), Query Frame = 1 

Query: 1   MAARNSLLKYIRVHVQALPK--SNTPILYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVI 60
           MAAR  LLK++RV VQA+P+  S+T  L +  F+A+RRR FSEEVRGSFLDKSEV DRVI
Sbjct: 1   MAARGLLLKHLRVQVQAVPQNPSSTGSLLLSSFHALRRRFFSEEVRGSFLDKSEVTDRVI 60

Query: 61  SVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLA 120
           SVVK FQKVDP KVTP AHFQNDLGLDSLD VE+VMALEEEFRFEIPDNE+DKI++I+LA
Sbjct: 61  SVVKNFQKVDPAKVTPIAHFQNDLGLDSLDAVELVMALEEEFRFEIPDNEADKISSISLA 120

Query: 121 VDFIASHPQAK 130
           VDFIASHPQAK
Sbjct: 121 VDFIASHPQAK 131

[Close]
BLAST of Cp4.1LG00g01400 vs. NCBI nr
Match: gi|657958634|ref|XP_008370844.1| (PREDICTED: acyl carrier protein 2, mitochondrial [Malus domestica])

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-45
Identity = 97/130 (74.62%), Postives = 114/130 (87.69%), Query Frame = 1 

Query: 2   AARNSLLKYIRVHVQALPK--SNTPILYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVIS 61
           +ARN LLK++RV VQA+P   S+T  L++ PF AIRRRLFSEEVRG+FLDKSEV DRV+S
Sbjct: 4   SARNVLLKHLRVQVQAVPSNPSSTAPLFLSPFAAIRRRLFSEEVRGTFLDKSEVTDRVVS 63

Query: 62  VVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAV 121
           VVK FQKVDP KVTP A+F++DLGLDSLD+VE+VMALEEEF FEIPDNE+DKI +I LAV
Sbjct: 64  VVKNFQKVDPSKVTPNANFESDLGLDSLDSVEIVMALEEEFGFEIPDNEADKIKSIGLAV 123

Query: 122 DFIASHPQAK 130
           DFI+SHPQAK
Sbjct: 124 DFISSHPQAK 133

[Close]
BLAST of Cp4.1LG00g01400 vs. NCBI nr
Match: gi|658020750|ref|XP_008345753.1| (PREDICTED: acyl carrier protein 2, mitochondrial-like [Malus domestica])

HSP 1 Score: 190.7 bits (483), Expect = 1.6e-45
Identity = 97/130 (74.62%), Postives = 114/130 (87.69%), Query Frame = 1 

Query: 2   AARNSLLKYIRVHVQALPK--SNTPILYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVIS 61
           +ARN LLK++RV VQA+P   S+T  L++ PF AIRRRLFSEEVRG+FLDKSEV DRV+S
Sbjct: 4   SARNVLLKHLRVQVQAVPSNPSSTXPLFLSPFAAIRRRLFSEEVRGTFLDKSEVTDRVVS 63

Query: 62  VVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLAV 121
           VVK FQKVDP KVTP A+F++DLGLDSLD+VE+VMALEEEF FEIPDNE+DKI +I LAV
Sbjct: 64  VVKNFQKVDPSKVTPNANFESDLGLDSLDSVEIVMALEEEFGFEIPDNEADKIKSIGLAV 123

Query: 122 DFIASHPQAK 130
           DFI+SHPQAK
Sbjct: 124 DFISSHPQAK 133

[Close]
BLAST of Cp4.1LG00g01400 vs. NCBI nr
Match: gi|157072867|gb|ABV08889.1| (acyl-carrier-protein [Triadica sebifera])

HSP 1 Score: 190.3 bits (482), Expect = 2.1e-45
Identity = 102/131 (77.86%), Postives = 112/131 (85.50%), Query Frame = 1 

Query: 1   MAARNSLLKYIRVHVQALPKSNTPI--LYVHPFNAIRRRLFSEEVRGSFLDKSEVADRVI 60
           MAAR +LLKY+R++VQ + +S  P   L+   FN+I RR FSEEVRGSFLDKSEV DRVI
Sbjct: 1   MAARGALLKYLRINVQTVSQSPRPNSGLFALSFNSIVRR-FSEEVRGSFLDKSEVTDRVI 60

Query: 61  SVVKKFQKVDPCKVTPTAHFQNDLGLDSLDTVEVVMALEEEFRFEIPDNESDKINAINLA 120
           SVVK FQKVDP KVTP AHFQNDLGL SLDTVEVVMALEEEF FEIPDNE+DKIN+INLA
Sbjct: 61  SVVKNFQKVDPSKVTPNAHFQNDLGLGSLDTVEVVMALEEEFGFEIPDNEADKINSINLA 120

Query: 121 VDFIASHPQAK 130
           VDFIASHPQAK
Sbjct: 121 VDFIASHPQAK 130

The following BLAST results are available for this feature:
BLAST of Cp4.1LG00g01400 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ACPM2_ARATH6.9e-4473.64Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=... [more]
ACPM1_ARATH2.4e-2850.78Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=... [more]
ACPM_NEUCR1.1e-2051.30Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74... [more]
ACPM_SCHPO1.9e-1751.85Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strai... [more]
ACP_LEUMU6.7e-1554.67Acyl carrier protein OS=Leucothrix mucor GN=acpP PE=1 SV=2[more]
BLAST of Cp4.1LG00g01400 vs. TrEMBL
Match NameE-valueIdentityDescription
M5W1T8_PRUPE1.4e-4878.46Acyl carrier protein OS=Prunus persica GN=PRUPE_ppa013239mg PE=3 SV=1[more]
W9RQC9_9ROSA2.1e-4777.86Acyl carrier protein OS=Morus notabilis GN=L484_005582 PE=3 SV=1[more]
E6Y2N3_TRISB1.5e-4577.86Acyl carrier protein OS=Triadica sebifera GN=acp PE=2 SV=1[more]
B9IQ34_POPTR2.5e-4574.24Acyl carrier protein OS=Populus trichocarpa GN=POPTR_0019s08300g PE=3 SV=1[more]
I3RV98_9ERIC5.7e-4576.92Acyl carrier protein OS=Camellia oleifera GN=ACP PE=2 SV=1[more]
BLAST of Cp4.1LG00g01400 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G65290.13.9e-4573.64 mitochondrial acyl carrier protein 2[more]
AT2G44620.11.3e-2950.78 mitochondrial acyl carrier protein 1[more]
AT5G47630.12.5e-1537.30 mitochondrial acyl carrier protein 3[more]
AT3G05020.12.0e-0937.08 acyl carrier protein 1[more]
AT5G27200.13.8e-0837.89 acyl carrier protein 5[more]
BLAST of Cp4.1LG00g01400 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|595830791|ref|XP_007206137.1|2.1e-4878.46hypothetical protein PRUPE_ppa013239mg [Prunus persica][more]
gi|703116829|ref|XP_010101233.1|3.0e-4777.86Acyl carrier protein 2 [Morus notabilis][more]
gi|657958634|ref|XP_008370844.1|1.6e-4574.62PREDICTED: acyl carrier protein 2, mitochondrial [Malus domestica][more]
gi|658020750|ref|XP_008345753.1|1.6e-4574.62PREDICTED: acyl carrier protein 2, mitochondrial-like [Malus domestica][more]
gi|157072867|gb|ABV08889.1|2.1e-4577.86acyl-carrier-protein [Triadica sebifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006633fatty acid biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR009081PP-bd_ACP
IPR006162Ppantetheine_attach_site
IPR003231Acyl_carrier
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0042335 cuticle development
biological_process GO:0009409 response to cold
biological_process GO:0000038 very long-chain fatty acid metabolic process
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0005575 cellular_component
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG00g01400.1Cp4.1LG00g01400.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003231Acyl carrier protein (ACP)PRODOMPD000887coord: 90..125
score: 1.0
IPR003231Acyl carrier protein (ACP)HAMAPMF_01217Acyl_carriercoord: 52..126
score: 1
IPR003231Acyl carrier protein (ACP)TIGRFAMsTIGR00517TIGR00517coord: 51..125
score: 1.5
IPR006162Phosphopantetheine attachment sitePROSITEPS00012PHOSPHOPANTETHEINEcoord: 81..96
scor
IPR009081Phosphopantetheine binding ACP domainGENE3DG3DSA:1.10.1200.10coord: 43..129
score: 6.8
IPR009081Phosphopantetheine binding ACP domainPFAMPF00550PP-bindingcoord: 56..107
score: 3.
IPR009081Phosphopantetheine binding ACP domainPROFILEPS50075ACP_DOMAINcoord: 53..123
score: 13
IPR009081Phosphopantetheine binding ACP domainunknownSSF47336ACP-likecoord: 49..125
score: 5.5
NoneNo IPR availablePANTHERPTHR20863ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATEDcoord: 1..129
score: 7.3
NoneNo IPR availablePANTHERPTHR20863:SF30SUBFAMILY NOT NAMEDcoord: 1..129
score: 7.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG00g01400CmaCh11G009200Cucurbita maxima (Rimu)cmacpeB103
Cp4.1LG00g01400CmaCh10G008480Cucurbita maxima (Rimu)cmacpeB070
Cp4.1LG00g01400CmoCh10G008830Cucurbita moschata (Rifu)cmocpeB042
Cp4.1LG00g01400CmoCh11G009420Cucurbita moschata (Rifu)cmocpeB079
Cp4.1LG00g01400Cla002179Watermelon (97103) v1cpewmB007
Cp4.1LG00g01400ClCG03G011640Watermelon (Charleston Gray)cpewcgB014
Cp4.1LG00g01400Lsi06G006600Bottle gourd (USVL1VR-Ls)cpelsiB017
Cp4.1LG00g01400Carg22710Silver-seed gourdcarcpeB0756
Cp4.1LG00g01400Carg17815Silver-seed gourdcarcpeB1340
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG00g01400Cp4.1LG18g02350Cucurbita pepo (Zucchini)cpecpeB006
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG00g01400Cucumber (Chinese Long) v3cpecucB0000
Cp4.1LG00g01400Wax gourdcpewgoB0018
Cp4.1LG00g01400Cucumber (Gy14) v1cgycpeB0927
Cp4.1LG00g01400Wild cucumber (PI 183967)cpecpiB000
Cp4.1LG00g01400Cucumber (Chinese Long) v2cpecuB000
Cp4.1LG00g01400Melon (DHL92) v3.5.1cpemeB007
Cp4.1LG00g01400Cucumber (Gy14) v2cgybcpeB002
Cp4.1LG00g01400Melon (DHL92) v3.6.1cpemedB008