Cp4.1LG16g01560 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG16g01560
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMads box protein
LocationCp4.1LG16 : 3613107 .. 3613991 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAATCTCTCGGCCGTCGGAAAATTGAAATCAAAAAGCTTGAGAAGAAGAGTAGCCAGCAGGTTACCTTCTCTAAACGCCGCGCCGGACTTTTCAACAAGGCGGCGGAGCTTTCCGTTCTGTGCGGTGCTGAGATCGCGATCCTCGTCTCCTCTGCCACCAACAAGCTCTATACATTCGGTCATCCCAATGTTGAATCGCTCTTGGACCGTTTTCTCACCGGAAATTCTGCTCCGCCTAAGCCGGCTGAGGCCTACCTCCCTCTGCAGGAGTTGAACCGCGATTTTGACGATGTGGCGGCTGAGTTCGACATTGAGAAGAGGCGCGCGGCAGAGCGCTCGAGTAACGATCGATTTTGGTGGGATGAGCCGCTGGAATCTATGAAAATCGACGAACTGAAGCGATTCCGGTCGTCGTTGGTGGAACTGAGAGGAAAAGTGGCGGAGAGAGTGGAGAAATTTACGGATATGAGAACAGAAGGATCTCCGATACCTGCTCTGCAGCCGTCAACTCCTCCGTCGATTACCCTGGTCGGAAACCTCCAACCGCCGCCGACGACTCCATCAATTGACCTCGTCGAAAACCTCCAACAGCCGCCGACACCTCCATCAATTGGTCTCGTCGAAAACCTCCAACGGCCGCCGACGCCTCCATCAATTGGCTTCTTTGAAAATCTCCAATGGCCGTCGACGCCTCCATCAATTGGCCTCTTCGAAAATCTCCGATGGCCGTCGACGCCTCCATCAATTGACCTCGTCAAAAGCCTCCATTGGTCACCGATGCCGTCAATTCACCTTGCTGAAAACGACCAATGTCTGCCGTCGTCGTTTCATATCTCTGGAAACCACTCTGTCGCGCGACGGCTGAATATGCTAGACTAG

mRNA sequence

ATGAAGAAATCTCTCGGCCGTCGGAAAATTGAAATCAAAAAGCTTGAGAAGAAGAGTAGCCAGCAGGTTACCTTCTCTAAACGCCGCGCCGGACTTTTCAACAAGGCGGCGGAGCTTTCCGTTCTGTGCGGTGCTGAGATCGCGATCCTCGTCTCCTCTGCCACCAACAAGCTCTATACATTCGGTCATCCCAATGTTGAATCGCTCTTGGACCGTTTTCTCACCGGAAATTCTGCTCCGCCTAAGCCGGCTGAGGCCTACCTCCCTCTGCAGGAGTTGAACCGCGATTTTGACGATGTGGCGGCTGAGTTCGACATTGAGAAGAGGCGCGCGGCAGAGCGCTCGAGTAACGATCGATTTTGGTGGGATGAGCCGCTGGAATCTATGAAAATCGACGAACTGAAGCGATTCCGGTCGTCGTTGGTGGAACTGAGAGGAAAAGTGGCGGAGAGAGTGGAGAAATTTACGGATATGAGAACAGAAGGATCTCCGATACCTGCTCTGCAGCCGTCAACTCCTCCGTCGATTACCCTGGTCGGAAACCTCCAACCGCCGCCGACGACTCCATCAATTGACCTCGTCGAAAACCTCCAACAGCCGCCGACACCTCCATCAATTGGTCTCGTCGAAAACCTCCAACGGCCGCCGACGCCTCCATCAATTGGCTTCTTTGAAAATCTCCAATGGCCGTCGACGCCTCCATCAATTGGCCTCTTCGAAAATCTCCGATGGCCGTCGACGCCTCCATCAATTGACCTCGTCAAAAGCCTCCATTGGTCACCGATGCCGTCAATTCACCTTGCTGAAAACGACCAATGTCTGCCGTCGTCGTTTCATATCTCTGGAAACCACTCTGTCGCGCGACGGCTGAATATGCTAGACTAG

Coding sequence (CDS)

ATGAAGAAATCTCTCGGCCGTCGGAAAATTGAAATCAAAAAGCTTGAGAAGAAGAGTAGCCAGCAGGTTACCTTCTCTAAACGCCGCGCCGGACTTTTCAACAAGGCGGCGGAGCTTTCCGTTCTGTGCGGTGCTGAGATCGCGATCCTCGTCTCCTCTGCCACCAACAAGCTCTATACATTCGGTCATCCCAATGTTGAATCGCTCTTGGACCGTTTTCTCACCGGAAATTCTGCTCCGCCTAAGCCGGCTGAGGCCTACCTCCCTCTGCAGGAGTTGAACCGCGATTTTGACGATGTGGCGGCTGAGTTCGACATTGAGAAGAGGCGCGCGGCAGAGCGCTCGAGTAACGATCGATTTTGGTGGGATGAGCCGCTGGAATCTATGAAAATCGACGAACTGAAGCGATTCCGGTCGTCGTTGGTGGAACTGAGAGGAAAAGTGGCGGAGAGAGTGGAGAAATTTACGGATATGAGAACAGAAGGATCTCCGATACCTGCTCTGCAGCCGTCAACTCCTCCGTCGATTACCCTGGTCGGAAACCTCCAACCGCCGCCGACGACTCCATCAATTGACCTCGTCGAAAACCTCCAACAGCCGCCGACACCTCCATCAATTGGTCTCGTCGAAAACCTCCAACGGCCGCCGACGCCTCCATCAATTGGCTTCTTTGAAAATCTCCAATGGCCGTCGACGCCTCCATCAATTGGCCTCTTCGAAAATCTCCGATGGCCGTCGACGCCTCCATCAATTGACCTCGTCAAAAGCCTCCATTGGTCACCGATGCCGTCAATTCACCTTGCTGAAAACGACCAATGTCTGCCGTCGTCGTTTCATATCTCTGGAAACCACTCTGTCGCGCGACGGCTGAATATGCTAGACTAG

Protein sequence

MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTFGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSNDRFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQPSTPPSITLVGNLQPPPTTPSIDLVENLQQPPTPPSIGLVENLQRPPTPPSIGFFENLQWPSTPPSIGLFENLRWPSTPPSIDLVKSLHWSPMPSIHLAENDQCLPSSFHISGNHSVARRLNMLD
Homology
[Close]
BLAST of Cp4.1LG16g01560 vs. Swiss-Prot
Match: AGL62_ARATH (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana GN=AGL62 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.0e-26
Identity = 65/169 (38.46%), Postives = 104/169 (61.54%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           +KKS GR+KIE+ K++ +S+ QVTFSKRR+GLF KA+EL  LCGAE+AI+V S   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVESLLDRFLTGNSAPP--------KPAEAYLPLQELNRDFDDVAAEFDIEK---- 120
           FGHPNV+S++DRF+  N  PP        +       +Q+LN     V ++ + EK    
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 --RRAAERSSNDRFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKF 156
             ++  E++     WW++P+E + + +L+ F+ +L  L+  V     +F
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASRF 170

[Close]
BLAST of Cp4.1LG16g01560 vs. Swiss-Prot
Match: AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.4e-23
Identity = 68/189 (35.98%), Postives = 111/189 (58.73%), Query Frame = 1 

Query: 2   KKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTF 61
           K+S+GR+KI + K++K+S +QVTFSKRRAGLF KA+EL  LCGAEI I+V S   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVESLLDRFLTGNSAPPKPAE----AYLPLQELNRDFDDVAAEFDIEKRR--AAERS 121
           GHP+VES+LDR+++ N+     ++    +     ELN     + +E + EK++  A E  
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 SNDRF------WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQ 179
             +        WW++P+E M + +L+  + +L ELR  V   +  F + + +       +
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNEAKDDVFGFLDNK 238

[Close]
BLAST of Cp4.1LG16g01560 vs. Swiss-Prot
Match: AGL23_ARATH (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana GN=AGL23 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.9e-21
Identity = 61/138 (44.20%), Postives = 89/138 (64.49%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           +KK+LGRRK+EI K+ K+S+ QVTFSKR+AGLF KA+E   LC A+IA++V S   K+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVESLLDRF----LTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSS 120
           FGHPNV+ LLD F    +  N+     +   L +Q LN+ + +V AE + E++    R+ 
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 NDR------FWWDE-PLE 128
           N+R       WW + PLE
Sbjct: 122 NERENENAEEWWSKSPLE 139

[Close]
BLAST of Cp4.1LG16g01560 vs. Swiss-Prot
Match: AGL28_ARATH (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana GN=AGL28 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 5.4e-20
Identity = 63/161 (39.13%), Postives = 89/161 (55.28%), Query Frame = 1 

Query: 2   KKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTF 61
           +K+LGRRKIE+ K+  +S+ QVTFSKRR+GLF K +EL  LC AEIAI+V S + K Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVESLLD----RFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSN 121
           GHPNV  LLD    R +  N+     +   L +Q LN    +V AE + E+        N
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQN 122

Query: 122 DR------FWWDEPLESMKIDELKRFRSSLVELRGKVAERV 153
           +R       WW      + + +    +  L  L+ +V E+V
Sbjct: 123 ERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKV 163

[Close]
BLAST of Cp4.1LG16g01560 vs. Swiss-Prot
Match: AGL29_ARATH (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana GN=AGL29 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.3e-17
Identity = 55/159 (34.59%), Postives = 96/159 (60.38%), Query Frame = 1 

Query: 5   LGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTFGHP 64
           +GRRKI+++ ++  +++QVTFSKRR GLF KA+EL+ LC AE+ I+V S   K +++G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 65  NVESLLDRFL----TGNSAPPKPAEAYLP-LQELNRDFDDVAAEFDIEKRRA------AE 124
           N++S+ +RF+      +S   + +  Y P L+ L+   D +  E + EK R        E
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 120

Query: 125 RSSNDRFWWDEPLESMKIDELKRFRSSLVELRGKVAERV 153
            + ++RF   E +E++ +DEL  ++  L  + G++  +V
Sbjct: 121 SAGDERF--KESIETLTLDELNEYKDRLQTVHGRIEGQV 157

[Close]
BLAST of Cp4.1LG16g01560 vs. TrEMBL
Match: A0A0A0LLS2_CUCSA (Mads box protein OS=Cucumis sativus GN=Csa_2G277060 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 4.3e-56
Identity = 116/162 (71.60%), Postives = 133/162 (82.10%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKKSLGR+KIEIKKL  KS +QVTFSKRRAGLFNKAAELS+L GAEIAILV S+T+K+YT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSNDRF 120
           FGHPNV+ L+DRFLT N  PPKP EAYLPL+ELNRD  DV AEF+ EKRRA        F
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120

Query: 121 WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEG 163
           WWDE +E M I++LKRFRSSL+ELRGKVAERVE+   +R +G
Sbjct: 121 WWDEAMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNQG 162

[Close]
BLAST of Cp4.1LG16g01560 vs. TrEMBL
Match: A0A0A0LE01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860240 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.1e-55
Identity = 131/231 (56.71%), Postives = 162/231 (70.13%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKK+LGR+KIEIKKLEKKSS+QVTFSKRRAGLF KA ELSVLCGAE+AI+V S  +KL+ 
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAE------- 120
           FGHP+V+ LLDR+LTGN +PPKPAE+Y+P+ E NRDF D A EF+ EK+RAAE       
Sbjct: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAED 128

Query: 121 RSSNDRFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQPSTP 180
              N  FWW E +E ++++ELK FRS+L++LR KVAERVEK T +R  G  +PAL P  P
Sbjct: 129 SRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPP--P 188

Query: 181 PSITLVGNLQPPPTTPSIDLVENLQQPPTPPSIGLVENLQRPPTPPSIGFF 225
           P          P T+ S  L+ N Q+ P P +  L  N QR  T   +GFF
Sbjct: 189 PQ---------PMTSSSFHLIGNHQELPPPTAFHLAGN-QRVAT--GLGFF 225

[Close]
BLAST of Cp4.1LG16g01560 vs. TrEMBL
Match: A0A0A0LW53_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181400 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.4e-54
Identity = 115/166 (69.28%), Postives = 135/166 (81.33%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKKS GRRKIEIK+L+K +++QVTFSKRR GLFNKAAELS+LCGAEIAIL+ S+  K+YT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSN-DR 120
           FGHPNV++LLDRFLTGN  PPKPAEAYLPL ELN D     AEF+IEK+RA ER  N +R
Sbjct: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSER 120

Query: 121 FWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPI 166
           FWWDE LE M++DELK FRSSL++LR  VA R+EK   MR E  P+
Sbjct: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPV 166

[Close]
BLAST of Cp4.1LG16g01560 vs. TrEMBL
Match: A0A022RIX0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a020886mg PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.1e-35
Identity = 84/163 (51.53%), Postives = 115/163 (70.55%), Query Frame = 1 

Query: 2   KKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTF 61
           KK++GRRKIEIKK+EKKSS QVTFSKRR GLF KA+ELSVLCGAEIAILV S  NK+Y++
Sbjct: 13  KKTMGRRKIEIKKIEKKSSLQVTFSKRRIGLFRKASELSVLCGAEIAILVQSPANKIYSY 72

Query: 62  GHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRD-FDDVAAEFDIEKR---RAAERSSN 121
           GHP+VE+LLDR+ TG       A + +P +E  R  +D+   + +I KR   + +  SSN
Sbjct: 73  GHPSVETLLDRYQTGGGG--GAASSIIPYREDGRSKYDEAVKKLEIVKRSMKQESNSSSN 132

Query: 122 DRFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRT 161
            RFWWDEP+E M++ EL+ +  ++  L+  V  RV++    ++
Sbjct: 133 TRFWWDEPMEGMELYELEEYAEAMEALKDNVLRRVDEMEKQKS 173

[Close]
BLAST of Cp4.1LG16g01560 vs. TrEMBL
Match: A0A022RN39_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a020670mg PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.7e-33
Identity = 81/160 (50.62%), Postives = 111/160 (69.38%), Query Frame = 1 

Query: 5   LGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTFGHP 64
           +GRRKIEIKK+EKKSS QVTFSKRR GLF KA+ELSVLCGAEIAILV S  NK+Y++GHP
Sbjct: 1   MGRRKIEIKKIEKKSSLQVTFSKRRIGLFRKASELSVLCGAEIAILVQSPANKIYSYGHP 60

Query: 65  NVESLLDRFLTGNSAPPKPAEAYLPLQELNRD-FDDVAAEFDIEKRRAAERSS---NDRF 124
           +VE+LLDR+ TG       A + +P +E  R  +D+   + +I KR   + SS   + RF
Sbjct: 61  SVETLLDRYQTGGGG--GAASSIIPYREDGRSKYDEAVKKLEIVKRSMKQESSSIISSRF 120

Query: 125 WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRT 161
           WWDEP+E M++ EL+ +  ++  L+  V  RV++    ++
Sbjct: 121 WWDEPMEGMELYELEEYAEAMEALKDNVLRRVDEMEKQKS 158

[Close]
BLAST of Cp4.1LG16g01560 vs. TAIR10
Match: AT5G60440.1 (AT5G60440.1 AGAMOUS-like 62)

HSP 1 Score: 120.6 bits (301), Expect = 1.7e-27
Identity = 65/169 (38.46%), Postives = 104/169 (61.54%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           +KKS GR+KIE+ K++ +S+ QVTFSKRR+GLF KA+EL  LCGAE+AI+V S   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVESLLDRFLTGNSAPP--------KPAEAYLPLQELNRDFDDVAAEFDIEK---- 120
           FGHPNV+S++DRF+  N  PP        +       +Q+LN     V ++ + EK    
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 --RRAAERSSNDRFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKF 156
             ++  E++     WW++P+E + + +L+ F+ +L  L+  V     +F
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASRF 170

[Close]
BLAST of Cp4.1LG16g01560 vs. TAIR10
Match: AT2G24840.1 (AT2G24840.1 AGAMOUS-like 61)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-24
Identity = 68/189 (35.98%), Postives = 111/189 (58.73%), Query Frame = 1 

Query: 2   KKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTF 61
           K+S+GR+KI + K++K+S +QVTFSKRRAGLF KA+EL  LCGAEI I+V S   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVESLLDRFLTGNSAPPKPAE----AYLPLQELNRDFDDVAAEFDIEKRR--AAERS 121
           GHP+VES+LDR+++ N+     ++    +     ELN     + +E + EK++  A E  
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 SNDRF------WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQ 179
             +        WW++P+E M + +L+  + +L ELR  V   +  F + + +       +
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNEAKDDVFGFLDNK 238

[Close]
BLAST of Cp4.1LG16g01560 vs. TAIR10
Match: AT1G65360.1 (AT1G65360.1 AGAMOUS-like 23)

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-22
Identity = 61/138 (44.20%), Postives = 89/138 (64.49%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           +KK+LGRRK+EI K+ K+S+ QVTFSKR+AGLF KA+E   LC A+IA++V S   K+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVESLLDRF----LTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSS 120
           FGHPNV+ LLD F    +  N+     +   L +Q LN+ + +V AE + E++    R+ 
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 NDR------FWWDE-PLE 128
           N+R       WW + PLE
Sbjct: 122 NERENENAEEWWSKSPLE 139

[Close]
BLAST of Cp4.1LG16g01560 vs. TAIR10
Match: AT1G01530.1 (AT1G01530.1 AGAMOUS-like 28)

HSP 1 Score: 99.8 bits (247), Expect = 3.1e-21
Identity = 63/161 (39.13%), Postives = 89/161 (55.28%), Query Frame = 1 

Query: 2   KKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTF 61
           +K+LGRRKIE+ K+  +S+ QVTFSKRR+GLF K +EL  LC AEIAI+V S + K Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVESLLD----RFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSN 121
           GHPNV  LLD    R +  N+     +   L +Q LN    +V AE + E+        N
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQN 122

Query: 122 DR------FWWDEPLESMKIDELKRFRSSLVELRGKVAERV 153
           +R       WW      + + +    +  L  L+ +V E+V
Sbjct: 123 ERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKV 163

[Close]
BLAST of Cp4.1LG16g01560 vs. TAIR10
Match: AT1G17310.1 (AT1G17310.1 MADS-box transcription factor family protein)

HSP 1 Score: 95.5 bits (236), Expect = 5.8e-20
Identity = 63/159 (39.62%), Postives = 96/159 (60.38%), Query Frame = 1 

Query: 2   KKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTF 61
           K + GR+KIEIKK+E+++ +QVTFSKRR GLF K+AELSVL GA+IA++  S  +++Y F
Sbjct: 44  KTTRGRQKIEIKKIEEETKRQVTFSKRRRGLFKKSAELSVLTGAKIAVITFSKCDRIYRF 103

Query: 62  GHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSNDRFW 121
           GH  V++L+D++L  +   P   E Y           D AA  D E RR          W
Sbjct: 104 GH--VDALIDKYLRKS---PVKLEGY---------SGDNAA--DEESRRP---------W 163

Query: 122 WDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRT 161
           W+ P+ES+  +EL+ + ++L  LR  + +++    + RT
Sbjct: 164 WERPVESVPEEELEEYMAALSMLRENIGKKIVAMGNDRT 177

[Close]
BLAST of Cp4.1LG16g01560 vs. NCBI nr
Match: gi|659118116|ref|XP_008458954.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 248.1 bits (632), Expect = 2.0e-62
Identity = 137/204 (67.16%), Postives = 153/204 (75.00%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKKSLGRRKIEIKKL+KKS+QQVTFSKRRAGLFNKAAELS+LCGAEIA+LV S+  K+YT
Sbjct: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60

Query: 61  FGHPNVESLLDRFLTG-NSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSN-D 120
           FGHPNV++LLDRFLTG N+ PPKPAEAYLP+ ELNRD     AEF+IEKRRAAERS N +
Sbjct: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120

Query: 121 RFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQPSTPPSITL 180
           RFWWDEPLESMKIDELKRFRSSLVELR  V ER+EK  D                     
Sbjct: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHC------------------ 178

Query: 181 VGNLQPPPTTPSIDLVENLQQPPT 203
                    TPSID+ E++Q P T
Sbjct: 181 --------VTPSIDIAESIQWPET 178

[Close]
BLAST of Cp4.1LG16g01560 vs. NCBI nr
Match: gi|449463992|ref|XP_004149713.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus])

HSP 1 Score: 226.5 bits (576), Expect = 6.1e-56
Identity = 116/162 (71.60%), Postives = 133/162 (82.10%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKKSLGR+KIEIKKL  KS +QVTFSKRRAGLFNKAAELS+L GAEIAILV S+T+K+YT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSNDRF 120
           FGHPNV+ L+DRFLT N  PPKP EAYLPL+ELNRD  DV AEF+ EKRRA        F
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120

Query: 121 WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEG 163
           WWDE +E M I++LKRFRSSL+ELRGKVAERVE+   +R +G
Sbjct: 121 WWDEAMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNQG 162

[Close]
BLAST of Cp4.1LG16g01560 vs. NCBI nr
Match: gi|778686644|ref|XP_004147877.2| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 3.0e-55
Identity = 131/231 (56.71%), Postives = 162/231 (70.13%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKK+LGR+KIEIKKLEKKSS+QVTFSKRRAGLF KA ELSVLCGAE+AI+V S  +KL+ 
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 60

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAE------- 120
           FGHP+V+ LLDR+LTGN +PPKPAE+Y+P+ E NRDF D A EF+ EK+RAAE       
Sbjct: 61  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAED 120

Query: 121 RSSNDRFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQPSTP 180
              N  FWW E +E ++++ELK FRS+L++LR KVAERVEK T +R  G  +PAL P  P
Sbjct: 121 SRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPP--P 180

Query: 181 PSITLVGNLQPPPTTPSIDLVENLQQPPTPPSIGLVENLQRPPTPPSIGFF 225
           P          P T+ S  L+ N Q+ P P +  L  N QR  T   +GFF
Sbjct: 181 PQ---------PMTSSSFHLIGNHQELPPPTAFHLAGN-QRVAT--GLGFF 217

[Close]
BLAST of Cp4.1LG16g01560 vs. NCBI nr
Match: gi|700204855|gb|KGN59988.1| (hypothetical protein Csa_3G860240 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 3.0e-55
Identity = 131/231 (56.71%), Postives = 162/231 (70.13%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKK+LGR+KIEIKKLEKKSS+QVTFSKRRAGLF KA ELSVLCGAE+AI+V S  +KL+ 
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAE------- 120
           FGHP+V+ LLDR+LTGN +PPKPAE+Y+P+ E NRDF D A EF+ EK+RAAE       
Sbjct: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAED 128

Query: 121 RSSNDRFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQPSTP 180
              N  FWW E +E ++++ELK FRS+L++LR KVAERVEK T +R  G  +PAL P  P
Sbjct: 129 SRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPP--P 188

Query: 181 PSITLVGNLQPPPTTPSIDLVENLQQPPTPPSIGLVENLQRPPTPPSIGFF 225
           P          P T+ S  L+ N Q+ P P +  L  N QR  T   +GFF
Sbjct: 189 PQ---------PMTSSSFHLIGNHQELPPPTAFHLAGN-QRVAT--GLGFF 225

[Close]
BLAST of Cp4.1LG16g01560 vs. NCBI nr
Match: gi|659133060|ref|XP_008466532.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 221.5 bits (563), Expect = 2.0e-54
Identity = 128/231 (55.41%), Postives = 158/231 (68.40%), Query Frame = 1 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKK+LGR+KIEIKKLEKKSS+QVTFSKRRAGLF KA ELSVLCGAE+AI+V S  +K++ 
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 68

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAE------- 120
           FGHP+V+ LLDR+LTGN +PPKPAE+Y+P+ E NRDF D A EF+ EK+RAAE       
Sbjct: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 128

Query: 121 RSSNDRFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQPSTP 180
              N  FWW E  E M+++ELK FRS+L++LR KVAERVEK T +R  G  +PAL P   
Sbjct: 129 SRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ 188

Query: 181 PSITLVGNLQPPPTTPSIDLVENLQQPPTPPSIGLVENLQRPPTPPSIGFF 225
           P        QP  ++ S  L  N QQ P P +  L  N +       +GFF
Sbjct: 189 PQ----PQPQPMTSSSSFHLAGNHQQLPPPRAFHLAGNHR---VATGLGFF 232

The following BLAST results are available for this feature:
BLAST of Cp4.1LG16g01560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AGL62_ARATH3.0e-2638.46Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana GN=AGL62 PE=1 SV=1[more]
AGL61_ARATH2.4e-2335.98Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1[more]
AGL23_ARATH2.9e-2144.20Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana GN=AGL23 PE=2 SV=1[more]
AGL28_ARATH5.4e-2039.13Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana GN=AGL28 PE=2 SV=1[more]
AGL29_ARATH3.3e-1734.59Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana GN=AGL29 PE=2 SV=1[more]
BLAST of Cp4.1LG16g01560 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLS2_CUCSA4.3e-5671.60Mads box protein OS=Cucumis sativus GN=Csa_2G277060 PE=4 SV=1[more]
A0A0A0LE01_CUCSA2.1e-5556.71Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860240 PE=4 SV=1[more]
A0A0A0LW53_CUCSA1.4e-5469.28Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181400 PE=4 SV=1[more]
A0A022RIX0_ERYGU7.1e-3551.53Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a020886mg PE=4 SV=1[more]
A0A022RN39_ERYGU1.7e-3350.63Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a020670mg PE=4 SV=1[more]
BLAST of Cp4.1LG16g01560 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G60440.11.7e-2738.46 AGAMOUS-like 62[more]
AT2G24840.11.3e-2435.98 AGAMOUS-like 61[more]
AT1G65360.11.6e-2244.20 AGAMOUS-like 23[more]
AT1G01530.13.1e-2139.13 AGAMOUS-like 28[more]
AT1G17310.15.8e-2039.62 MADS-box transcription factor family protein[more]
BLAST of Cp4.1LG16g01560 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118116|ref|XP_008458954.1|2.0e-6267.16PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo][more]
gi|449463992|ref|XP_004149713.1|6.1e-5671.60PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus][more]
gi|778686644|ref|XP_004147877.2|3.0e-5556.71PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus][more]
gi|700204855|gb|KGN59988.1|3.0e-5556.71hypothetical protein Csa_3G860240 [Cucumis sativus][more]
gi|659133060|ref|XP_008466532.1|2.0e-5455.41PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR002100TF_MADSbox
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG16g01560.1Cp4.1LG16g01560.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 27..42
score: 6.7E-20coord: 42..63
score: 6.7E-20coord: 7..27
score: 6.7
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 15..61
score: 2.3
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 5..64
score: 1.4
IPR002100Transcription factor, MADS-boxPROFILEPS50066MADS_BOX_2coord: 5..65
score: 26
IPR002100Transcription factor, MADS-boxunknownSSF55455SRF-likecoord: 6..75
score: 1.7
NoneNo IPR availableunknownCoilCoilcoord: 90..110
scor
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 6..270
score: 5.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG16g01560Cucsa.367070Cucumber (Gy14) v1cgycpeB0972
Cp4.1LG16g01560CmaCh20G009610Cucurbita maxima (Rimu)cmacpeB565
Cp4.1LG16g01560CmoCh20G009720Cucurbita moschata (Rifu)cmocpeB517
Cp4.1LG16g01560Cla020215Watermelon (97103) v1cpewmB294
Cp4.1LG16g01560Csa2G277060Cucumber (Chinese Long) v2cpecuB272
Cp4.1LG16g01560MELO3C020871Melon (DHL92) v3.5.1cpemeB264
Cp4.1LG16g01560ClCG02G012490Watermelon (Charleston Gray)cpewcgB262
Cp4.1LG16g01560CSPI02G13880Wild cucumber (PI 183967)cpecpiB275
Cp4.1LG16g01560CsaV3_2G016620Cucumber (Chinese Long) v3cpecucB0338
Cp4.1LG16g01560Bhi10G001721Wax gourdcpewgoB0366
Cp4.1LG16g01560Carg25484Silver-seed gourdcarcpeB1322
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG16g01560Cucurbita pepo (Zucchini)cpecpeB309
Cp4.1LG16g01560Cucumber (Gy14) v1cgycpeB0111
Cp4.1LG16g01560Cucurbita maxima (Rimu)cmacpeB626
Cp4.1LG16g01560Cucurbita moschata (Rifu)cmocpeB575
Cp4.1LG16g01560Wild cucumber (PI 183967)cpecpiB272
Cp4.1LG16g01560Cucumber (Chinese Long) v2cpecuB270
Cp4.1LG16g01560Bottle gourd (USVL1VR-Ls)cpelsiB220
Cp4.1LG16g01560Watermelon (Charleston Gray)cpewcgB270
Cp4.1LG16g01560Watermelon (97103) v1cpewmB292
Cp4.1LG16g01560Melon (DHL92) v3.5.1cpemeB260
Cp4.1LG16g01560Cucumber (Gy14) v2cgybcpeB196
Cp4.1LG16g01560Melon (DHL92) v3.6.1cpemedB306
Cp4.1LG16g01560Cucumber (Chinese Long) v3cpecucB0337
Cp4.1LG16g01560Wax gourdcpewgoB0358