MELO3C020871 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C020871
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	MADS-box transcription factor family protein
Location	chr11 : 3352839 .. 3353396 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAATCATCAGGCCGTCAAAAAATCGAAATCAAGAAGCTAAATGTGAAGAGTAGGCGGCAAGTAACCTTCTCCAAACGCCGTGCCGGACTCTTCAACAAGGCAGCGGAACTCTCCATTCTTTCCGGCGCTGAGATTGCTATCCTCGTCTTCTCTTCCACCGGCAAAATCTATACATTCGGACATCCTAACGTTGATATGCTCATAGATCGTTTCCTGACGTCGAATTTTGTTCCGACGAAGCCGGCGGAAGCCTACCTCCCTTTGGAGGAGTTGAATCGTGATTTGAAGGATGCGACTGCGGAGTTTGAAATAGAGAAGATGCGGGCTGAGAGAATGAGGAATACCGGGGGGTTTTGGTGGGATGAGACGGAGATGGAATGTATGGGAATTGAGGAGTTGAAGCGATTCCGGTCGTCGTTGATGGAACTCAGGGGAAAAGTTGCGGAGAAAGTGGAGGAATTGGCGGCGGTGAATCAAGAGGTTCTAATCACTTCCCCGTCGTTTCATCATCACGCGACGACGATTGAGGATTTGGGGTTAGGGTTTCTCTAA

mRNA sequence

ATGAAGAAATCATCAGGCCGTCAAAAAATCGAAATCAAGAAGCTAAATGTGAAGAGTAGGCGGCAAGTAACCTTCTCCAAACGCCGTGCCGGACTCTTCAACAAGGCAGCGGAACTCTCCATTCTTTCCGGCGCTGAGATTGCTATCCTCGTCTTCTCTTCCACCGGCAAAATCTATACATTCGGACATCCTAACGTTGATATGCTCATAGATCGTTTCCTGACGTCGAATTTTGTTCCGACGAAGCCGGCGGAAGCCTACCTCCCTTTGGAGGAGTTGAATCGTGATTTGAAGGATGCGACTGCGGAGTTTGAAATAGAGAAGATGCGGGCTGAGAGAATGAGGAATACCGGGGGGTTTTGGTGGGATGAGACGGAGATGGAATGTATGGGAATTGAGGAGTTGAAGCGATTCCGGTCGTCGTTGATGGAACTCAGGGGAAAAGTTGCGGAGAAAGTGGAGGAATTGGCGGCGGTGAATCAAGAGGTTCTAATCACTTCCCCGTCGTTTCATCATCACGCGACGACGATTGAGGATTTGGGGTTAGGGTTTCTCTAA

Coding sequence (CDS)

ATGAAGAAATCATCAGGCCGTCAAAAAATCGAAATCAAGAAGCTAAATGTGAAGAGTAGGCGGCAAGTAACCTTCTCCAAACGCCGTGCCGGACTCTTCAACAAGGCAGCGGAACTCTCCATTCTTTCCGGCGCTGAGATTGCTATCCTCGTCTTCTCTTCCACCGGCAAAATCTATACATTCGGACATCCTAACGTTGATATGCTCATAGATCGTTTCCTGACGTCGAATTTTGTTCCGACGAAGCCGGCGGAAGCCTACCTCCCTTTGGAGGAGTTGAATCGTGATTTGAAGGATGCGACTGCGGAGTTTGAAATAGAGAAGATGCGGGCTGAGAGAATGAGGAATACCGGGGGGTTTTGGTGGGATGAGACGGAGATGGAATGTATGGGAATTGAGGAGTTGAAGCGATTCCGGTCGTCGTTGATGGAACTCAGGGGAAAAGTTGCGGAGAAAGTGGAGGAATTGGCGGCGGTGAATCAAGAGGTTCTAATCACTTCCCCGTCGTTTCATCATCACGCGACGACGATTGAGGATTTGGGGTTAGGGTTTCTCTAA

Protein sequence

MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTFGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDLGLGFL*

Homology

[Close]

BLAST of MELO3C020871 vs. Swiss-Prot
Match: AGL62_ARATH (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana GN=AGL62 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 9.3e-26
Identity = 70/193 (36.27%), Postives = 105/193 (54.40%), Query Frame = 1


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           +KKS GRQKIE+ K+  +S  QVTFSKRR+GLF KA+EL  L GAE+AI+VFS   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDMLIDRFLTSNFVP--------TKPAEAYLPLEELNRDLKDATAEFEIEKMRAE 120
           FGHPNVD +IDRF+ +N +P         +       +++LN  L    ++ E EK + +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 RMRNTG------GFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLIT 180
            ++         G WW E  +E + + +L+ F+ +L  L+  V  +       N      
Sbjct: 122 ELKKIREKTKALGNWW-EDPVEELALSQLEGFKGNLENLKKVVTVEASRFFQANVPNFYV 181

[Close]

BLAST of MELO3C020871 vs. Swiss-Prot
Match: AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.2e-22
Identity = 69/172 (40.12%), Postives = 99/172 (57.56%), Query Frame = 1


Query: 2   KKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTF 61
           K+S GRQKI + K+  +S RQVTFSKRRAGLF KA+EL  L GAEI I+VFS   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDMLIDRFLTSNFVPTKPAEAYLPLE----ELNRDLKDATAEFE--------IEKM 121
           GHP+V+ ++DR+++ N +    ++          ELN  L    +E E        +E+M
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 RAERMRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQ 162
           R E +R +   WW E  +E M + +L+  + +L ELR  V   V  +A+ N+
Sbjct: 179 RKESVRRSMINWW-EKPVEEMNMVQLQEMKYALEELRKTV---VTNMASFNE 226

[Close]

BLAST of MELO3C020871 vs. Swiss-Prot
Match: AGL28_ARATH (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana GN=AGL28 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-21
Identity = 67/178 (37.64%), Postives = 95/178 (53.37%), Query Frame = 1


Query: 2   KKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTF 61
           +K+ GR+KIE+ K+  +S  QVTFSKRR+GLF K +EL  L  AEIAI+VFS +GK Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVDMLID----RFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEK------MRA 121
           GHPNV+ L+D    R +  N      +   L ++ LN  L +  AE E E+      ++ 
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQN 122

Query: 122 ERMRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPS 170
           ER       WW  +  E + + +    +  L  L+ +V EKV +L   N    + S S
Sbjct: 123 ERENKDAEKWWRNSPTE-LNLAQSTSMKCDLEALKKEVDEKVAQLHHRNLNFYVGSSS 179

[Close]

BLAST of MELO3C020871 vs. Swiss-Prot
Match: AGL23_ARATH (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana GN=AGL23 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.3e-21
Identity = 65/181 (35.91%), Postives = 101/181 (55.80%), Query Frame = 1


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           +KK+ GR+K+EI K+  +S  QVTFSKR+AGLF KA+E   L  A+IA++VFS  GK+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDMLIDRF----LTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIE------KMR 120
           FGHPNVD+L+D F    +  N      +   L ++ LN+   +  AE E E      + +
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 AERMRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSF 172
            ER       WW ++ +E + + +       L +L+  V EK  +L  ++Q    T+P+F
Sbjct: 122 NERENENAEEWWSKSPLE-LNLSQSTCMIRVLKDLKKIVDEKAIQL--IHQ----TNPNF 175

[Close]

BLAST of MELO3C020871 vs. Swiss-Prot
Match: AGL29_ARATH (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana GN=AGL29 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-17
Identity = 58/169 (34.32%), Postives = 94/169 (55.62%), Query Frame = 1


Query: 6   GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTFGHPN 65
           GR+KI+++ +   + RQVTFSKRR GLF KA+EL+ L  AE+ I+VFS  GK +++G PN
Sbjct: 2   GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61

Query: 66  VDMLIDRFL----TSNFVPTKPAEAYLP-LEELNRDLKDATAEFEIEKMRAERMRNTGGF 125
           +D + +RF+     S+    + +  Y P L+ L+  L     E E EK R E+ +     
Sbjct: 62  LDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLES 121

Query: 126 WWDE---TEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLIT 167
             DE     +E + ++EL  ++  L  + G++  +V  L A +  +L++
Sbjct: 122 AGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQASSCLMLLS 170

[Close]

BLAST of MELO3C020871 vs. TrEMBL
Match: A0A0A0LLS2_CUCSA (Mads box protein OS=Cucumis sativus GN=Csa_2G277060 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 6.6e-79
Identity = 161/183 (87.98%), Postives = 164/183 (89.62%), Query Frame = 1


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKKS GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSST KIYT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120
           FGHPNVD LIDRFLTSNFVP KP EAYLPLEELNRDLKD TAEFE EK RAERMR TGGF
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120

Query: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFHH--HATTI 180
           WWDE  MECMGIE+LKRFRSSLMELRGKVAE+VEELAAV NQ  L TSPSFHH   AT I
Sbjct: 121 WWDEA-MECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNQGFLTTSPSFHHLSVATEI 180

[Close]

BLAST of MELO3C020871 vs. TrEMBL
Match: A0A0A0LW53_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181400 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.3e-54
Identity = 115/171 (67.25%), Postives = 138/171 (80.70%), Query Frame = 1


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKKSSGR+KIEIK+L+  + RQVTFSKRR GLFNKAAELS+L GAEIAIL+FSS GK+YT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRA-ERMRNTGG 120
           FGHPNVD L+DRFLT NF+P KPAEAYLPL ELN DL  A AEFEIEK RA ER+RN+  
Sbjct: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSER 120

Query: 121 FWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSF 171
           FWWDE  +E M ++ELK FRSSL++LR  VA ++E++ A+  E    +PS+
Sbjct: 121 FWWDEA-LERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSW 170

[Close]

BLAST of MELO3C020871 vs. TrEMBL
Match: A0A0A0LE01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860240 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 7.9e-48
Identity = 102/166 (61.45%), Postives = 123/166 (74.10%), Query Frame = 1


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKK+ GRQKIEIKKL  KS +QVTFSKRRAGLF KA ELS+L GAE+AI+VFS   K++ 
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68

Query: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMR-------AER 120
           FGHP+VD+L+DR+LT N  P KPAE+Y+P+ E NRD  D   EFE EK R       AE 
Sbjct: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAED 128

Query: 121 MRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV 160
            R  GGFWW E  +E + +EELK FRS+LM+LR KVAE+VE+L AV
Sbjct: 129 SRKNGGFWWQEA-VEGLRLEELKDFRSALMDLRAKVAERVEKLTAV 173

[Close]

BLAST of MELO3C020871 vs. TrEMBL
Match: W9QW40_9ROSA (Agamous-like MADS-box protein AGL62 OS=Morus notabilis GN=L484_002949 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.9e-31
Identity = 84/172 (48.84%), Postives = 112/172 (65.12%), Query Frame = 1


Query: 2   KKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTF 61
           KK+ GRQ+IEIKKL   S +QVTFSKRR+GLF KAAELS+L G+E+A LVFS  GK++TF
Sbjct: 11  KKTQGRQRIEIKKLENGSNKQVTFSKRRSGLFRKAAELSVLCGSEVAALVFSPNGKLFTF 70

Query: 62  GHPNVDMLIDRFL-TSNFVPTKPAEAYLPL-----EELNRDLKDATAEFEIEKMR---AE 121
           GHP+VD ++ R+   +N  P   A     +     EE NRD  +A  E E EK R    +
Sbjct: 71  GHPSVDSVVLRYAHGTNTAPAAAASTSTNVVTNVSEEFNRDYVEAVKELEAEKTRLAEEK 130

Query: 122 RMRNTGG--FWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQE 163
           +    GG  FWWDE  +E MG+EEL++  ++L+ELR +VA +V+ L A   E
Sbjct: 131 KKAKIGGEKFWWDE-GIEGMGMEELRQHMAALIELRRRVAARVQGLKAAPPE 181

[Close]

BLAST of MELO3C020871 vs. TrEMBL
Match: W9R6M2_9ROSA (Agamous-like MADS-box protein AGL62 OS=Morus notabilis GN=L484_002953 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-30
Identity = 87/192 (45.31%), Postives = 114/192 (59.38%), Query Frame = 1


Query: 2   KKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTF 61
           KK+ GRQ+IEIKKL   S +QVTFSKRR+GLF KAAELS+L G+E+A LVFS   K++ F
Sbjct: 11  KKTQGRQRIEIKKLENGSNKQVTFSKRRSGLFKKAAELSVLCGSEVAALVFSPNSKLFAF 70

Query: 62  GHPNVDMLIDRFLTSNFVPTKPAEAYLP-------LEELNRDLKDATAEFEIEKMR---A 121
           GHP+VD ++ R+          A A           EE NRD  +A  E E EK R    
Sbjct: 71  GHPSVDSIVLRYAHGTNTAAAAAAASTSTNVVTNVFEEFNRDYVEAVKELEAEKTRLAEE 130

Query: 122 ERMRNTGG--FWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQE------- 175
           ++    GG  FWWDE  +E MG+EEL++  ++L+ELR +VA +V+EL A   E       
Sbjct: 131 KKKEKIGGEKFWWDE-GIEGMGMEELRQHMAALIELRRRVAARVQELKAAPPENATSLAV 190

[Close]

BLAST of MELO3C020871 vs. TAIR10
Match: AT5G60440.1 (AT5G60440.1 AGAMOUS-like 62)

HSP 1 Score: 118.2 bits (295), Expect = 5.3e-27
Identity = 70/193 (36.27%), Postives = 105/193 (54.40%), Query Frame = 1


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           +KKS GRQKIE+ K+  +S  QVTFSKRR+GLF KA+EL  L GAE+AI+VFS   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDMLIDRFLTSNFVP--------TKPAEAYLPLEELNRDLKDATAEFEIEKMRAE 120
           FGHPNVD +IDRF+ +N +P         +       +++LN  L    ++ E EK + +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 RMRNTG------GFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLIT 180
            ++         G WW E  +E + + +L+ F+ +L  L+  V  +       N      
Sbjct: 122 ELKKIREKTKALGNWW-EDPVEELALSQLEGFKGNLENLKKVVTVEASRFFQANVPNFYV 181

[Close]

BLAST of MELO3C020871 vs. TAIR10
Match: AT2G24840.1 (AT2G24840.1 AGAMOUS-like 61)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-23
Identity = 69/172 (40.12%), Postives = 99/172 (57.56%), Query Frame = 1


Query: 2   KKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTF 61
           K+S GRQKI + K+  +S RQVTFSKRRAGLF KA+EL  L GAEI I+VFS   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDMLIDRFLTSNFVPTKPAEAYLPLE----ELNRDLKDATAEFE--------IEKM 121
           GHP+V+ ++DR+++ N +    ++          ELN  L    +E E        +E+M
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 RAERMRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQ 162
           R E +R +   WW E  +E M + +L+  + +L ELR  V   V  +A+ N+
Sbjct: 179 RKESVRRSMINWW-EKPVEEMNMVQLQEMKYALEELRKTV---VTNMASFNE 226

[Close]

BLAST of MELO3C020871 vs. TAIR10
Match: AT1G01530.1 (AT1G01530.1 AGAMOUS-like 28)

HSP 1 Score: 104.8 bits (260), Expect = 6.0e-23
Identity = 67/178 (37.64%), Postives = 95/178 (53.37%), Query Frame = 1


Query: 2   KKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTF 61
           +K+ GR+KIE+ K+  +S  QVTFSKRR+GLF K +EL  L  AEIAI+VFS +GK Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVDMLID----RFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEK------MRA 121
           GHPNV+ L+D    R +  N      +   L ++ LN  L +  AE E E+      ++ 
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQN 122

Query: 122 ERMRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPS 170
           ER       WW  +  E + + +    +  L  L+ +V EKV +L   N    + S S
Sbjct: 123 ERENKDAEKWWRNSPTE-LNLAQSTSMKCDLEALKKEVDEKVAQLHHRNLNFYVGSSS 179

[Close]

BLAST of MELO3C020871 vs. TAIR10
Match: AT4G36590.1 (AT4G36590.1 MADS-box transcription factor family protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-22
Identity = 65/180 (36.11%), Postives = 98/180 (54.44%), Query Frame = 1


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           ++ + GRQKIE+KK+  +S  QVTFSKRR GLF KA+EL  LSGAEI ++VFS  GK+++
Sbjct: 2   VRSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFS 61

Query: 61  FGHPNVDMLIDRFLTSN--------------FVPTKPAEAYLPLEELNRDLKDATAEFEI 120
           FGHP+V  LI RF   N               V T+P      ++ LN  L +  A  E 
Sbjct: 62  FGHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDR---NIQYLNNILTEVLANQEK 121

Query: 121 EKMR------AERMRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVN 161
           EK +       +  R   G W+ E +++ + + E  +  S+L +++ K+  ++ + + VN
Sbjct: 122 EKQKRMVLDLLKESREQVGNWY-EKDVKDLDMNETNQLISALQDVKKKLVREMSQYSQVN 177

[Close]

BLAST of MELO3C020871 vs. TAIR10
Match: AT1G65360.1 (AT1G65360.1 AGAMOUS-like 23)

HSP 1 Score: 102.4 bits (254), Expect = 3.0e-22
Identity = 65/181 (35.91%), Postives = 101/181 (55.80%), Query Frame = 1


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           +KK+ GR+K+EI K+  +S  QVTFSKR+AGLF KA+E   L  A+IA++VFS  GK+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDMLIDRF----LTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIE------KMR 120
           FGHPNVD+L+D F    +  N      +   L ++ LN+   +  AE E E      + +
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 AERMRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSF 172
            ER       WW ++ +E + + +       L +L+  V EK  +L  ++Q    T+P+F
Sbjct: 122 NERENENAEEWWSKSPLE-LNLSQSTCMIRVLKDLKKIVDEKAIQL--IHQ----TNPNF 175

[Close]

BLAST of MELO3C020871 vs. NCBI nr
Match: gi|659115872|ref|XP_008457781.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 365.2 bits (936), Expect = 7.0e-98
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 1


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120
           FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120

Query: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL 180
           WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL
Sbjct: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSFHHHATTIEDL 180

Query: 181 GLGFL 186
           GLGFL
Sbjct: 181 GLGFL 185

[Close]

BLAST of MELO3C020871 vs. NCBI nr
Match: gi|449463992|ref|XP_004149713.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus])

HSP 1 Score: 301.6 bits (771), Expect = 9.5e-79
Identity = 161/183 (87.98%), Postives = 164/183 (89.62%), Query Frame = 1


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKKS GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSST KIYT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120
           FGHPNVD LIDRFLTSNFVP KP EAYLPLEELNRDLKD TAEFE EK RAERMR TGGF
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120

Query: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFHH--HATTI 180
           WWDE  MECMGIE+LKRFRSSLMELRGKVAE+VEELAAV NQ  L TSPSFHH   AT I
Sbjct: 121 WWDEA-MECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNQGFLTTSPSFHHLSVATEI 180

[Close]

BLAST of MELO3C020871 vs. NCBI nr
Match: gi|659118116|ref|XP_008458954.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 219.9 bits (559), Expect = 3.6e-54
Identity = 118/158 (74.68%), Postives = 133/158 (84.18%), Query Frame = 1


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKKS GR+KIEIKKL+ KS +QVTFSKRRAGLFNKAAELSIL GAEIA+LVFSS GKIYT
Sbjct: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60

Query: 61  FGHPNVDMLIDRFLT-SNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMR-AERMRNTG 120
           FGHPNVD L+DRFLT +N VP KPAEAYLP+ ELNRDL  A AEFEIEK R AER RN+ 
Sbjct: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120

Query: 121 GFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEEL 157
            FWWDE  +E M I+ELKRFRSSL+ELR  V E++E++
Sbjct: 121 RFWWDE-PLESMKIDELKRFRSSLVELRANVVERLEKI 157

[Close]

BLAST of MELO3C020871 vs. NCBI nr
Match: gi|449443690|ref|XP_004139610.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 4.7e-54
Identity = 115/171 (67.25%), Postives = 138/171 (80.70%), Query Frame = 1


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKKSSGR+KIEIK+L+  + RQVTFSKRR GLFNKAAELS+L GAEIAIL+FSS GK+YT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRA-ERMRNTGG 120
           FGHPNVD L+DRFLT NF+P KPAEAYLPL ELN DL  A AEFEIEK RA ER+RN+  
Sbjct: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSER 120

Query: 121 FWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAVNQEVLITSPSF 171
           FWWDE  +E M ++ELK FRSSL++LR  VA ++E++ A+  E    +PS+
Sbjct: 121 FWWDEA-LERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSW 170

[Close]

BLAST of MELO3C020871 vs. NCBI nr
Match: gi|778686644|ref|XP_004147877.2| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-47
Identity = 102/166 (61.45%), Postives = 123/166 (74.10%), Query Frame = 1


Query: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60
           MKK+ GRQKIEIKKL  KS +QVTFSKRRAGLF KA ELS+L GAE+AI+VFS   K++ 
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 60

Query: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMR-------AER 120
           FGHP+VD+L+DR+LT N  P KPAE+Y+P+ E NRD  D   EFE EK R       AE 
Sbjct: 61  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAED 120

Query: 121 MRNTGGFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV 160
            R  GGFWW E  +E + +EELK FRS+LM+LR KVAE+VE+L AV
Sbjct: 121 SRKNGGFWWQEA-VEGLRLEELKDFRSALMDLRAKVAERVEKLTAV 165

The following BLAST results are available for this feature:

BLAST of MELO3C020871 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AGL62_ARATH	9.3e-26	36.27	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana GN=AGL62 PE=1 SV=1	[more]
AGL61_ARATH	2.2e-22	40.12	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1	[more]
AGL28_ARATH	1.1e-21	37.64	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana GN=AGL28 PE=2 SV=1	[more]
AGL23_ARATH	5.3e-21	35.91	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana GN=AGL23 PE=2 SV=1	[more]
AGL29_ARATH	1.6e-17	34.32	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana GN=AGL29 PE=2 SV=1	[more]

BLAST of MELO3C020871 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLS2_CUCSA	6.6e-79	87.98	Mads box protein OS=Cucumis sativus GN=Csa_2G277060 PE=4 SV=1	[more]
A0A0A0LW53_CUCSA	3.3e-54	67.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181400 PE=4 SV=1	[more]
A0A0A0LE01_CUCSA	7.9e-48	61.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860240 PE=4 SV=1	[more]
W9QW40_9ROSA	3.9e-31	48.84	Agamous-like MADS-box protein AGL62 OS=Morus notabilis GN=L484_002949 PE=4 SV=1	[more]
W9R6M2_9ROSA	1.1e-30	45.31	Agamous-like MADS-box protein AGL62 OS=Morus notabilis GN=L484_002953 PE=4 SV=1	[more]

BLAST of MELO3C020871 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60440.1	5.3e-27	36.27	AGAMOUS-like 62	[more]
AT2G24840.1	1.2e-23	40.12	AGAMOUS-like 61	[more]
AT1G01530.1	6.0e-23	37.64	AGAMOUS-like 28	[more]
AT4G36590.1	1.7e-22	36.11	MADS-box transcription factor family protein	[more]
AT1G65360.1	3.0e-22	35.91	AGAMOUS-like 23	[more]

BLAST of MELO3C020871 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115872\|ref\|XP_008457781.1\|	7.0e-98	100.00	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]	[more]
gi\|449463992\|ref\|XP_004149713.1\|	9.5e-79	87.98	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus]	[more]
gi\|659118116\|ref\|XP_008458954.1\|	3.6e-54	74.68	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]	[more]
gi\|449443690\|ref\|XP_004139610.1\|	4.7e-54	67.25	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus]	[more]
gi\|778686644\|ref\|XP_004147877.2\|	1.1e-47	61.45	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002100	TF_MADSbox

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0030163	protein catabolic process
biological_process	GO:0006508	proteolysis
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0004190	aspartic-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020871T1	MELO3C020871T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 42..63 score: 1.0E-19coord: 27..42 score: 1.0E-19coord: 7..27 score: 1.0
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 18..61 score: 2.5
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 5..64 score: 6.1
IPR002100	Transcription factor, MADS-box	PROFILE	PS50066	MADS_BOX_2	coord: 5..65 score: 25
IPR002100	Transcription factor, MADS-box	unknown	SSF55455	SRF-like	coord: 6..79 score: 6.8
None	No IPR available	unknown	Coil	Coil	coord: 90..117 score: -coord: 142..162 scor
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 6..156 score: 2.9
None	No IPR available	PANTHER	PTHR11945:SF157	SUBFAMILY NOT NAMED	coord: 6..156 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C020871	Csa2G277060	Cucumber (Chinese Long) v2	cumeB093
MELO3C020871	Cla020215	Watermelon (97103) v1	mewmB120
MELO3C020871	ClCG02G012490	Watermelon (Charleston Gray)	mewcgB106
MELO3C020871	Cla97C02G038180	Watermelon (97103) v2	mewmbB108
MELO3C020871	Bhi10G001721	Wax gourd	mewgoB117
MELO3C020871	CSPI02G13880	Wild cucumber (PI 183967)	cpimeB091
MELO3C020871	Cucsa.367070	Cucumber (Gy14) v1	cgymeB596
MELO3C020871	CmaCh20G009610	Cucurbita maxima (Rimu)	cmameB498
MELO3C020871	CmoCh20G009720	Cucurbita moschata (Rifu)	cmomeB488
MELO3C020871	Lsi10G005410	Bottle gourd (USVL1VR-Ls)	lsimeB054
MELO3C020871	Cp4.1LG16g01560	Cucurbita pepo (Zucchini)	cpemeB264
MELO3C020871	CsaV3_2G016620	Cucumber (Chinese Long) v3	cucmeB102

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C020871	Silver-seed gourd	carmeB0403
MELO3C020871	Silver-seed gourd	carmeB0800
MELO3C020871	Silver-seed gourd	carmeB1028
MELO3C020871	Cucumber (Chinese Long) v3	cucmeB440
MELO3C020871	Watermelon (97103) v2	mewmbB078
MELO3C020871	Cucumber (Gy14) v1	cgymeB124
MELO3C020871	Cucurbita maxima (Rimu)	cmameB780
MELO3C020871	Cucurbita moschata (Rifu)	cmomeB770
MELO3C020871	Wild cucumber (PI 183967)	cpimeB432
MELO3C020871	Cucumber (Chinese Long) v2	cumeB438
MELO3C020871	Watermelon (Charleston Gray)	mewcgB083
MELO3C020871	Cucurbita pepo (Zucchini)	cpemeB660
MELO3C020871	Bottle gourd (USVL1VR-Ls)	lsimeB126
MELO3C020871	Cucumber (Gy14) v2	cgybmeB084
MELO3C020871	Cucumber (Gy14) v2	cgybmeB378