Carg25484 (gene) Silver-seed gourd

Overview
NameCarg25484
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionagamous-like MADS-box protein AGL62
LocationCucurbita_argyrosperma_scaffold_076 : 348766 .. 349605 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAATCTCTCGGCCGTCGGAAAATTGAAATAAAAAAGCTTGAGAAGAAGAGTAGCCAGCAGGTTACCTTCTCTAAACGCCGCGCCGGACTCTTCAACAAGGCGGCGGAGCTTTCCGTTCTGTGCGGTGCTGAGATCGCGATCCTCGTCTCCTCTGCTACCAACAAGCTCTATACATTCGGTCATCCCAATGTTGAGTCGCTCTTGGACCGTTTTCTCACTGGAAACTCTGCTCCGCCTAAGCCGGCTGAGGCCTACCTCCCTCTGCAGGAGTTGAACCGCGATTTTGACGATGTGGCGGCCGAGTTCGACATTGAGAAGAGGCGCGCGGCAGAGCGCTCGAGTAACGATCGATTTTGGTGGGATGAGCCGCTGGAATCTATGAAAATCGACGAACTGAAGCGATTCCGGTCGTCGTTGGTGGAACTGAGAGGAAAAGTGGCGGAGAGAGTGGAGAAATTTACGGATATGAGAACAGAAGGATCTCCGATACCTGCTCTGCAGCCGTCAACTCCTCCGTCGATTACCCTGGTCGGAAACCTCCAACCGCCGCCAACGACTCCATCAATTGACCTCGTCGAAAACCTCCAACGGCCGCCGACGCCTCCATCAATTGGCTTCTTTGAAAATCTCCAATGGCCGTCGACGCCTCCATCAATTGGCCTCTTCGAAAATCTCCGATGGCCGTCGACGCCTCCATCAATTGACCTCGTCAAAAGCCTCCAATGGTCACCGATGCCGTTGATTCACCTTGCTGAAAACGACCAATGTCTGCCGTCGTCGTTTCATATCTCTGGAAACCACTCTGTCGCGCGACGGCTGAATATGCTAGACTAG

mRNA sequence

ATGAAGAAATCTCTCGGCCGTCGGAAAATTGAAATAAAAAAGCTTGAGAAGAAGAGTAGCCAGCAGGTTACCTTCTCTAAACGCCGCGCCGGACTCTTCAACAAGGCGGCGGAGCTTTCCGTTCTGTGCGGTGCTGAGATCGCGATCCTCGTCTCCTCTGCTACCAACAAGCTCTATACATTCGGTCATCCCAATGTTGAGTCGCTCTTGGACCGTTTTCTCACTGGAAACTCTGCTCCGCCTAAGCCGGCTGAGGCCTACCTCCCTCTGCAGGAGTTGAACCGCGATTTTGACGATGTGGCGGCCGAGTTCGACATTGAGAAGAGGCGCGCGGCAGAGCGCTCGAGTAACGATCGATTTTGGTGGGATGAGCCGCTGGAATCTATGAAAATCGACGAACTGAAGCGATTCCGGTCGTCGTTGGTGGAACTGAGAGGAAAAGTGGCGGAGAGAGTGGAGAAATTTACGGATATGAGAACAGAAGGATCTCCGATACCTGCTCTGCAGCCGTCAACTCCTCCGTCGATTACCCTGGTCGGAAACCTCCAACCGCCGCCAACGACTCCATCAATTGACCTCGTCGAAAACCTCCAACGGCCGCCGACGCCTCCATCAATTGGCTTCTTTGAAAATCTCCAATGGCCGTCGACGCCTCCATCAATTGGCCTCTTCGAAAATCTCCGATGGCCGTCGACGCCTCCATCAATTGACCTCGTCAAAAGCCTCCAATGGTCACCGATGCCGTTGATTCACCTTGCTGAAAACGACCAATGTCTGCCGTCGTCGTTTCATATCTCTGGAAACCACTCTGTCGCGCGACGGCTGAATATGCTAGACTAG

Coding sequence (CDS)

ATGAAGAAATCTCTCGGCCGTCGGAAAATTGAAATAAAAAAGCTTGAGAAGAAGAGTAGCCAGCAGGTTACCTTCTCTAAACGCCGCGCCGGACTCTTCAACAAGGCGGCGGAGCTTTCCGTTCTGTGCGGTGCTGAGATCGCGATCCTCGTCTCCTCTGCTACCAACAAGCTCTATACATTCGGTCATCCCAATGTTGAGTCGCTCTTGGACCGTTTTCTCACTGGAAACTCTGCTCCGCCTAAGCCGGCTGAGGCCTACCTCCCTCTGCAGGAGTTGAACCGCGATTTTGACGATGTGGCGGCCGAGTTCGACATTGAGAAGAGGCGCGCGGCAGAGCGCTCGAGTAACGATCGATTTTGGTGGGATGAGCCGCTGGAATCTATGAAAATCGACGAACTGAAGCGATTCCGGTCGTCGTTGGTGGAACTGAGAGGAAAAGTGGCGGAGAGAGTGGAGAAATTTACGGATATGAGAACAGAAGGATCTCCGATACCTGCTCTGCAGCCGTCAACTCCTCCGTCGATTACCCTGGTCGGAAACCTCCAACCGCCGCCAACGACTCCATCAATTGACCTCGTCGAAAACCTCCAACGGCCGCCGACGCCTCCATCAATTGGCTTCTTTGAAAATCTCCAATGGCCGTCGACGCCTCCATCAATTGGCCTCTTCGAAAATCTCCGATGGCCGTCGACGCCTCCATCAATTGACCTCGTCAAAAGCCTCCAATGGTCACCGATGCCGTTGATTCACCTTGCTGAAAACGACCAATGTCTGCCGTCGTCGTTTCATATCTCTGGAAACCACTCTGTCGCGCGACGGCTGAATATGCTAGACTAG

Protein sequence

MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTFGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSNDRFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQPSTPPSITLVGNLQPPPTTPSIDLVENLQRPPTPPSIGFFENLQWPSTPPSIGLFENLRWPSTPPSIDLVKSLQWSPMPLIHLAENDQCLPSSFHISGNHSVARRLNMLD
Homology
[Close]
BLAST of Carg25484 vs. NCBI nr
Match: XP_023513250.1 (agamous-like MADS-box protein AGL61 [Cucurbita pepo subsp. pepo] >XP_023513251.1 agamous-like MADS-box protein AGL61 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.2 bits (975), Expect = 6.1e-102
Identity = 278/294 (94.56%), Postives = 278/294 (94.56%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT
Sbjct: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSNDRF 120
           FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSNDRF
Sbjct: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSNDRF 120

Query: 121 WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQPSTPPSITLVG 180
           WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQPSTPPSITLVG
Sbjct: 121 WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQPSTPPSITLVG 180

Query: 181 NLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           NLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 NLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXL---------------IHLAENDQCLPSSFHISGNHSVARRLNMLD 280
           XXXXXXXX                IHLAENDQCLPSSFHISGNHSVARRLNMLD
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXSIHLAENDQCLPSSFHISGNHSVARRLNMLD 294

[Close]
BLAST of Carg25484 vs. NCBI nr
Match: XP_022986583.1 (agamous-like MADS-box protein AGL61 [Cucurbita maxima])

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 273/279 (97.85%), Postives = 274/279 (98.21%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSA+NKLYT
Sbjct: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSASNKLYT 60

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSNDRF 120
           FGHPNVESLLDRFL GNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAER SNDRF
Sbjct: 61  FGHPNVESLLDRFLAGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERLSNDRF 120

Query: 121 WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQPSTPPSITLVG 180
           WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFT MR EGSPIPALQPSTPPSITLVG
Sbjct: 121 WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTAMRKEGSPIPALQPSTPPSITLVG 180

Query: 181 NLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           NLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 NLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXLIHLAENDQCLPSSFHISGNHSVARRLNMLD 280
           XXXXXXXX IHLAENDQCLPSSFHISGNHSVARRLNMLD
Sbjct: 241 XXXXXXXXSIHLAENDQCLPSSFHISGNHSVARRLNMLD 279

[Close]
BLAST of Carg25484 vs. NCBI nr
Match: XP_022944450.1 (agamous-like MADS-box protein AGL61 [Cucurbita moschata])

HSP 1 Score: 366.3 bits (939), Expect = 9.2e-98
Identity = 270/294 (91.84%), Postives = 275/294 (93.54%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSA+NKLYT
Sbjct: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSASNKLYT 60

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSNDRF 120
           FGHPNVESLLDRFLTGNS+PPKPAEAY PLQELNRDFDDVAAEFDIEKRRAAERSSNDRF
Sbjct: 61  FGHPNVESLLDRFLTGNSSPPKPAEAYFPLQELNRDFDDVAAEFDIEKRRAAERSSNDRF 120

Query: 121 WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQPSTPPSITLVG 180
           WWDEPLESMKIDELKRFRSSLVELR KVAERVEKFTD+RTEGSPIPALQPSTPPSITLVG
Sbjct: 121 WWDEPLESMKIDELKRFRSSLVELRAKVAERVEKFTDIRTEGSPIPALQPSTPPSITLVG 180

Query: 181 NLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           NLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 NLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXL---------------IHLAENDQCLPSSFHISGNHSVARRLNMLD 280
           XXXXXXXX                IHLAEN+QCLPSS HISGNHSVARRLNML+
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXSIHLAENNQCLPSSLHISGNHSVARRLNMLE 294

[Close]
BLAST of Carg25484 vs. NCBI nr
Match: XP_022944391.1 (agamous-like MADS-box protein AGL61 [Cucurbita moschata])

HSP 1 Score: 339.7 bits (870), Expect = 9.2e-90
Identity = 259/310 (83.55%), Postives = 266/310 (85.81%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILV+S+ NKLYT
Sbjct: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVASSRNKLYT 60

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSNDRF 120
           FGHPNVESLLDRFLTGNSAPPKPAEAYLPL+ELNRDFDDVAAE+DIEKRR AER SNDRF
Sbjct: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLEELNRDFDDVAAEYDIEKRRTAERLSNDRF 120

Query: 121 WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQPSTPPSITLVG 180
           WWDEPLESMKID+LKRFRSSLV+LRGKVAERVEKFT MR EGSP+PALQPSTPPSI LV 
Sbjct: 121 WWDEPLESMKIDDLKRFRSSLVDLRGKVAERVEKFTAMRKEGSPLPALQPSTPPSIDLVE 180

Query: 181 NLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
           NLQ  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 NLQRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXL-------------------------------IHLAENDQCLPSSFHISGNH 280
           XXXXXXXX                                IHLAENDQCL SSF ISGNH
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPMPSIHLAENDQCLLSSFQISGNH 300

[Close]
BLAST of Carg25484 vs. NCBI nr
Match: XP_023512238.1 (agamous-like MADS-box protein AGL61 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.4 bits (851), Expect = 1.5e-87
Identity = 259/310 (83.55%), Postives = 265/310 (85.48%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKKSLGRRKIEIKKLEKKS+QQVTFSKRRAGLFNKAAELSVLCGAEIAILV+S+ NKLYT
Sbjct: 1   MKKSLGRRKIEIKKLEKKSTQQVTFSKRRAGLFNKAAELSVLCGAEIAILVASSRNKLYT 60

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSNDRF 120
           FGHPNVESLLDRFLTGNSAPPKPAEAYLPL ELNRDFDDVAAE+DIEKRR AER SNDRF
Sbjct: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLDELNRDFDDVAAEYDIEKRRTAERLSNDRF 120

Query: 121 WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQPSTPPSITLV- 180
           WWDEPLESMKIDELKRFRSSLV+LRGKVAERVEKFT MR EGS +PALQPSTPPSI LV 
Sbjct: 121 WWDEPLESMKIDELKRFRSSLVDLRGKVAERVEKFTAMRKEGSLLPALQPSTPPSIDLVE 180

Query: 181 ---------------GNLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
                          GNLQXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 NLERPPTPPPSIGRFGNLQXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXL---------------IHLAENDQCLPSSFHISGNH 280
           XXXXXXXXXXXXXXXXXXXXXXXX                IHL ENDQCL SSF ISGNH
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIHLVENDQCLLSSFQISGNH 300

[Close]
BLAST of Carg25484 vs. TAIR10
Match: AT5G60440.1 (AGAMOUS-like 62)

HSP 1 Score: 120.6 bits (301), Expect = 1.6e-27
Identity = 65/169 (38.46%), Postives = 104/169 (61.54%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           +KKS GR+KIE+ K++ +S+ QVTFSKRR+GLF KA+EL  LCGAE+AI+V S   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVESLLDRFLTGNSAPP--------KPAEAYLPLQELNRDFDDVAAEFDIEK---- 120
           FGHPNV+S++DRF+  N  PP        +       +Q+LN     V ++ + EK    
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 --RRAAERSSNDRFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKF 156
             ++  E++     WW++P+E + + +L+ F+ +L  L+  V     +F
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASRF 170

[Close]
BLAST of Carg25484 vs. TAIR10
Match: AT2G24840.1 (AGAMOUS-like 61)

HSP 1 Score: 112.5 bits (280), Expect = 4.3e-25
Identity = 68/189 (35.98%), Postives = 111/189 (58.73%), Query Frame = 0 

Query: 2   KKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTF 61
           K+S+GR+KI + K++K+S +QVTFSKRRAGLF KA+EL  LCGAEI I+V S   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVESLLDRFLTGNSAPPKPAE----AYLPLQELNRDFDDVAAEFDIEKRR--AAERS 121
           GHP+VES+LDR+++ N+     ++    +     ELN     + +E + EK++  A E  
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 SNDRF------WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQ 179
             +        WW++P+E M + +L+  + +L ELR  V   +  F + + +       +
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNEAKDDVFGFLDNK 238

[Close]
BLAST of Carg25484 vs. TAIR10
Match: AT1G17310.1 (MADS-box transcription factor family protein)

HSP 1 Score: 95.5 bits (236), Expect = 5.5e-20
Identity = 63/159 (39.62%), Postives = 96/159 (60.38%), Query Frame = 0 

Query: 2   KKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTF 61
           K + GR+KIEIKK+E+++ +QVTFSKRR GLF K+AELSVL GA+IA++  S  +++Y F
Sbjct: 44  KTTRGRQKIEIKKIEEETKRQVTFSKRRRGLFKKSAELSVLTGAKIAVITFSKCDRIYRF 103

Query: 62  GHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSNDRFW 121
           GH  V++L+D++L  +   P   E Y           D AA  D E RR          W
Sbjct: 104 GH--VDALIDKYLRKS---PVKLEGY---------SGDNAA--DEESRRP---------W 163

Query: 122 WDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRT 161
           W+ P+ES+  +EL+ + ++L  LR  + +++    + RT
Sbjct: 164 WERPVESVPEEELEEYMAALSMLRENIGKKIVAMGNDRT 177

[Close]
BLAST of Carg25484 vs. TAIR10
Match: AT1G65360.1 (AGAMOUS-like 23)

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-18
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           +KK+LGRRK+EI K+ K+S+ QVTFSKR+AGLF KA+E   LC A+IA++V S   K+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVESLLDRF----LTGNSAPPKPAEAYLPLQELNRDFDDV 101
           FGHPNV+ LLD F    +  N+     +   L +Q LN+ + +V
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEV 105

[Close]
BLAST of Carg25484 vs. TAIR10
Match: AT2G34440.1 (AGAMOUS-like 29)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-18
Identity = 55/159 (34.59%), Postives = 96/159 (60.38%), Query Frame = 0 

Query: 5   LGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTFGHP 64
           +GRRKI+++ ++  +++QVTFSKRR GLF KA+EL+ LC AE+ I+V S   K +++G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 65  NVESLLDRFL----TGNSAPPKPAEAYLP-LQELNRDFDDVAAEFDIEKRRA------AE 124
           N++S+ +RF+      +S   + +  Y P L+ L+   D +  E + EK R        E
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 120

Query: 125 RSSNDRFWWDEPLESMKIDELKRFRSSLVELRGKVAERV 153
            + ++RF   E +E++ +DEL  ++  L  + G++  +V
Sbjct: 121 SAGDERF--KESIETLTLDELNEYKDRLQTVHGRIEGQV 157

[Close]
BLAST of Carg25484 vs. Swiss-Prot
Match: sp|Q9FKK2|AGL62_ARATH (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.9e-26
Identity = 65/169 (38.46%), Postives = 104/169 (61.54%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           +KKS GR+KIE+ K++ +S+ QVTFSKRR+GLF KA+EL  LCGAE+AI+V S   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVESLLDRFLTGNSAPP--------KPAEAYLPLQELNRDFDDVAAEFDIEK---- 120
           FGHPNV+S++DRF+  N  PP        +       +Q+LN     V ++ + EK    
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 --RRAAERSSNDRFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKF 156
             ++  E++     WW++P+E + + +L+ F+ +L  L+  V     +F
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASRF 170

[Close]
BLAST of Carg25484 vs. Swiss-Prot
Match: sp|Q4PSU4|AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 7.8e-24
Identity = 68/189 (35.98%), Postives = 111/189 (58.73%), Query Frame = 0 

Query: 2   KKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTF 61
           K+S+GR+KI + K++K+S +QVTFSKRRAGLF KA+EL  LCGAEI I+V S   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVESLLDRFLTGNSAPPKPAE----AYLPLQELNRDFDDVAAEFDIEKRR--AAERS 121
           GHP+VES+LDR+++ N+     ++    +     ELN     + +E + EK++  A E  
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 SNDRF------WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQ 179
             +        WW++P+E M + +L+  + +L ELR  V   +  F + + +       +
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNEAKDDVFGFLDNK 238

[Close]
BLAST of Carg25484 vs. Swiss-Prot
Match: sp|O80807|AGL23_ARATH (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.4e-17
Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           +KK+LGRRK+EI K+ K+S+ QVTFSKR+AGLF KA+E   LC A+IA++V S   K+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVESLLDRF----LTGNSAPPKPAEAYLPLQELNRDFDDV 101
           FGHPNV+ LLD F    +  N+     +   L +Q LN+ + +V
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEV 105

[Close]
BLAST of Carg25484 vs. Swiss-Prot
Match: sp|O64703|AGL29_ARATH (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.2e-17
Identity = 55/159 (34.59%), Postives = 96/159 (60.38%), Query Frame = 0 

Query: 5   LGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTFGHP 64
           +GRRKI+++ ++  +++QVTFSKRR GLF KA+EL+ LC AE+ I+V S   K +++G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 65  NVESLLDRFL----TGNSAPPKPAEAYLP-LQELNRDFDDVAAEFDIEKRRA------AE 124
           N++S+ +RF+      +S   + +  Y P L+ L+   D +  E + EK R        E
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 120

Query: 125 RSSNDRFWWDEPLESMKIDELKRFRSSLVELRGKVAERV 153
            + ++RF   E +E++ +DEL  ++  L  + G++  +V
Sbjct: 121 SAGDERF--KESIETLTLDELNEYKDRLQTVHGRIEGQV 157

[Close]
BLAST of Carg25484 vs. Swiss-Prot
Match: sp|Q9LMM8|AGL28_ARATH (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.6e-16
Identity = 50/97 (51.55%), Postives = 65/97 (67.01%), Query Frame = 0 

Query: 2  KKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTF 61
          +K+LGRRKIE+ K+  +S+ QVTFSKRR+GLF K +EL  LC AEIAI+V S + K Y+F
Sbjct: 3  RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62 GHPNVESLLD----RFLTGNSAPPKPAEAYLPLQELN 95
          GHPNV  LLD    R +  N+     +   L +Q LN
Sbjct: 63 GHPNVNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLN 99

[Close]
BLAST of Carg25484 vs. TrEMBL
Match: tr|A0A1S3CAA4|A0A1S3CAA4_CUCME (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103498214 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 9.1e-62
Identity = 128/159 (80.50%), Postives = 141/159 (88.68%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKKSLGRRKIEIKKL+KKS+QQVTFSKRRAGLFNKAAELS+LCGAEIA+LV S+  K+YT
Sbjct: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60

Query: 61  FGHPNVESLLDRFLTG-NSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSN-D 120
           FGHPNV++LLDRFLTG N+ PPKPAEAYLP+ ELNRD     AEF+IEKRRAAERS N +
Sbjct: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120

Query: 121 RFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTD 158
           RFWWDEPLESMKIDELKRFRSSLVELR  V ER+EK  D
Sbjct: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIED 159

[Close]
BLAST of Carg25484 vs. TrEMBL
Match: tr|A0A0A0LLS2|A0A0A0LLS2_CUCSA (Mads box protein OS=Cucumis sativus OX=3659 GN=Csa_2G277060 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 7.5e-56
Identity = 116/162 (71.60%), Postives = 133/162 (82.10%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKKSLGR+KIEIKKL  KS +QVTFSKRRAGLFNKAAELS+L GAEIAILV S+T+K+YT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSNDRF 120
           FGHPNV+ L+DRFLT N  PPKP EAYLPL+ELNRD  DV AEF+ EKRRA        F
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120

Query: 121 WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEG 163
           WWDE +E M I++LKRFRSSL+ELRGKVAERVE+   +R +G
Sbjct: 121 WWDEAMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNQG 162

[Close]
BLAST of Carg25484 vs. TrEMBL
Match: tr|A0A0A0LE01|A0A0A0LE01_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.8e-55
Identity = 120/194 (61.86%), Postives = 147/194 (75.77%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKK+LGR+KIEIKKLEKKSS+QVTFSKRRAGLF KA ELSVLCGAE+AI+V S  +KL+ 
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAE------- 120
           FGHP+V+ LLDR+LTGN +PPKPAE+Y+P+ E NRDF D A EF+ EK+RAAE       
Sbjct: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAED 128

Query: 121 RSSNDRFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPAL----Q 180
              N  FWW E +E ++++ELK FRS+L++LR KVAERVEK T +R  G  +PAL    Q
Sbjct: 129 SRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPPQ 188

Query: 181 PSTPPSITLVGNLQ 184
           P T  S  L+GN Q
Sbjct: 189 PMTSSSFHLIGNHQ 202

[Close]
BLAST of Carg25484 vs. TrEMBL
Match: tr|A0A0A0LW53|A0A0A0LW53_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181400 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.8e-54
Identity = 115/166 (69.28%), Postives = 135/166 (81.33%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKKS GRRKIEIK+L+K +++QVTFSKRR GLFNKAAELS+LCGAEIAIL+ S+  K+YT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSN-DR 120
           FGHPNV++LLDRFLTGN  PPKPAEAYLPL ELN D     AEF+IEK+RA ER  N +R
Sbjct: 61  FGHPNVDALLDRFLTGNFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSER 120

Query: 121 FWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPI 166
           FWWDE LE M++DELK FRSSL++LR  VA R+EK   MR E  P+
Sbjct: 121 FWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPV 166

[Close]
BLAST of Carg25484 vs. TrEMBL
Match: tr|A0A1S3CRI8|A0A1S3CRI8_CUCME (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103503920 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.7e-53
Identity = 113/177 (63.84%), Postives = 138/177 (77.97%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60
           MKK+LGR+KIEIKKLEKKSS+QVTFSKRRAGLF KA ELSVLCGAE+AI+V S  +K++ 
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 68

Query: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAE------- 120
           FGHP+V+ LLDR+LTGN +PPKPAE+Y+P+ E NRDF D A EF+ EK+RAAE       
Sbjct: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 128

Query: 121 RSSNDRFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQP 171
              N  FWW E  E M+++ELK FRS+L++LR KVAERVEK T +R  G  +PAL P
Sbjct: 129 SRKNGGFWWQEAAEGMRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPP 185

The following BLAST results are available for this feature:
BLAST of Carg25484 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023513250.16.1e-10294.56agamous-like MADS-box protein AGL61 [Cucurbita pepo subsp. pepo] >XP_023513251.1... [more]
XP_022986583.11.8e-10197.85agamous-like MADS-box protein AGL61 [Cucurbita maxima][more]
XP_022944450.19.2e-9891.84agamous-like MADS-box protein AGL61 [Cucurbita moschata][more]
XP_022944391.19.2e-9083.55agamous-like MADS-box protein AGL61 [Cucurbita moschata][more]
XP_023512238.11.5e-8783.55agamous-like MADS-box protein AGL61 [Cucurbita pepo subsp. pepo][more]
BLAST of Carg25484 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G60440.11.6e-2738.46AGAMOUS-like 62[more]
AT2G24840.14.3e-2535.98AGAMOUS-like 61[more]
AT1G17310.15.5e-2039.62MADS-box transcription factor family protein[more]
AT1G65360.11.3e-1848.08AGAMOUS-like 23[more]
AT2G34440.11.8e-1834.59AGAMOUS-like 29[more]
BLAST of Carg25484 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FKK2|AGL62_ARATH2.9e-2638.46Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=... [more]
sp|Q4PSU4|AGL61_ARATH7.8e-2435.98Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=... [more]
sp|O80807|AGL23_ARATH2.4e-1748.08Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=... [more]
sp|O64703|AGL29_ARATH3.2e-1734.59Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=... [more]
sp|Q9LMM8|AGL28_ARATH1.6e-1651.55Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=... [more]
BLAST of Carg25484 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CAA4|A0A1S3CAA4_CUCME9.1e-6280.50agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103498214 PE=4... [more]
tr|A0A0A0LLS2|A0A0A0LLS2_CUCSA7.5e-5671.60Mads box protein OS=Cucumis sativus OX=3659 GN=Csa_2G277060 PE=4 SV=1[more]
tr|A0A0A0LE01|A0A0A0LE01_CUCSA2.8e-5561.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE=4 SV=1[more]
tr|A0A0A0LW53|A0A0A0LW53_CUCSA1.8e-5469.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181400 PE=4 SV=1[more]
tr|A0A1S3CRI8|A0A1S3CRI8_CUCME2.7e-5363.84agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103503920 PE=4... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR036879TF_MADSbox_sf
IPR002100TF_MADSbox
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg25484-RACarg25484-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 90..110
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 4..160
NoneNo IPR availablePANTHERPTHR11945:SF157SUBFAMILY NOT NAMEDcoord: 4..160
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 7..27
score: 51.45
coord: 42..63
score: 39.54
coord: 27..42
score: 71.0
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 5..64
e-value: 1.4E-30
score: 117.6
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 15..61
e-value: 2.2E-21
score: 75.0
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 5..65
score: 26.408
IPR036879Transcription factor, MADS-box superfamilyGENE3DG3DSA:3.40.1810.10coord: 17..80
e-value: 7.6E-24
score: 85.0
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILYSSF55455SRF-likecoord: 6..75