Cp4.1LG14g01480 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG14g01480
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Heterogeneous nuclear ribonucleoprotein
Location	Cp4.1LG14 : 3652498 .. 3653989 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGAAATATTTATATTCATATTCCAATTTGATTCAGAGTCGAACCAGCCCGCGAAGCTTGTTGATTCGTATCGAACTGTTCGTTCTCTGTTCTTCGGAAGCCGACTGAAAAGCTCTCCAATGGAGGGAACCAATAAAACCACCAAAAGAAAGCTGGTGAAGAAATCTGAAAACAAGGTAGACAAGAAACCAAAGAAGGAGCTAGATGATCCCGTTCCGCCTCAACCACACGACGACGATGATTCCGACTCCGATTTGGACGATCTTTCCAAACTCCTCCAGCCTTTCTCCAAGACACAATTAATCGAGCTCATTTGCAGCACGGCTGTTAAAGACCCCAATCTTGAAGCCCAAATTCGAGCGGCTGCCGACCGCGATGTCACTAACCGCAAAATCTTTGTTCATGGCCTCAGTTGGGACACGACCCGAGAAACCCTAATGTTAGTTTTTGAATCTTTTGGTGAAATTGAAGATTGCAATGTGGTTATGGACAAAAATACAGGGAAGGCTAAGGGATATGGGTTTATTTTGTTTAAATCCCGGCAGGGTGCGACTAAGGCGTTGAAGGAACCTAGGAAGAGGATTAATAATCGGATGACTTCGTGTCAATTGGCTTCTTTGGGTTCGGTACCGCCCCCGCAAAGCCATGAGATTGGCTCGCGGAAGATTTATGTCGCTAATGTGCACCTTAACGTGGATGCTGAGAGGCTTAGGGCGTTCTTTGCGAAGTTTGGAGAGTTAGAGATGGGTCCGATAGGGTTTGATCCTGAGACAGGGAGATCGAGGGGTTATGCCATTTTTATTTATAGAACGAATGAAGGTGCGAGGAAGGCTCTTGAGGAGCCACACAAAGTGTTCGAAGGGAACAAATTGCACTGCCAGAGGGCGTCTGAGGGGAAGAACAAGAATCAAAATTCGACGCAGGCAGGGAAGAGCTTGGGGCAAAGTCAGCCGTCGGTTATGGCGGCCATGGCCGCAGCTCCAAATTTGCATTTGTTCGCTCAACATCCGAGCCTTAATCCTATGTATGGTGGATATGGGAACCCAGCTTTGGGAGGTGGAATGTTGAACCAAGGAGTAGTTCCCATGAGTCAAGTGGGTCTGATTGGTAGTTCAGTTGGGGCTGGGATAGGTTTGAGTGGTTACAGTGGGGGGTCGTATGGCTTAAGCCAATTAAGTGCCGGTGGTTCGTCATTGCTAGGCTCTTATGGCCCTGGTTCGTCATCACTGAAGGGGTTGCCGCACATTTACTCAAGCTCAATGCTCGGTAAGACGGTTTCTGAATCGGGTCAGACGGCTGCTGGTGGATCTTACGGTGGATACACGTCACATTTGTGGTATGAGATGTTTCATATTCTTTCTATTTACTGCACTTCAAGCCTCCTATCATTTGTATGTTTCAATTTTTCATTCAGTGGTTAGCGTCGATTACAGTGATAGGTAGTATGTATAGATTATTAATGAGTGCTGTGTACAATTGTGATTTAGGTAA

mRNA sequence

TAAGAAATATTTATATTCATATTCCAATTTGATTCAGAGTCGAACCAGCCCGCGAAGCTTGTTGATTCGTATCGAACTGTTCGTTCTCTGTTCTTCGGAAGCCGACTGAAAAGCTCTCCAATGGAGGGAACCAATAAAACCACCAAAAGAAAGCTGGTGAAGAAATCTGAAAACAAGGTAGACAAGAAACCAAAGAAGGAGCTAGATGATCCCGTTCCGCCTCAACCACACGACGACGATGATTCCGACTCCGATTTGGACGATCTTTCCAAACTCCTCCAGCCTTTCTCCAAGACACAATTAATCGAGCTCATTTGCAGCACGGCTGTTAAAGACCCCAATCTTGAAGCCCAAATTCGAGCGGCTGCCGACCGCGATGTCACTAACCGCAAAATCTTTGTTCATGGCCTCAGTTGGGACACGACCCGAGAAACCCTAATGTTAGTTTTTGAATCTTTTGGTGAAATTGAAGATTGCAATGTGGTTATGGACAAAAATACAGGGAAGGCTAAGGGATATGGGTTTATTTTGTTTAAATCCCGGCAGGGTGCGACTAAGGCGTTGAAGGAACCTAGGAAGAGGATTAATAATCGGATGACTTCGTGTCAATTGGCTTCTTTGGGTTCGGTACCGCCCCCGCAAAGCCATGAGATTGGCTCGCGGAAGATTTATGTCGCTAATGTGCACCTTAACGTGGATGCTGAGAGGCTTAGGGCGTTCTTTGCGAAGTTTGGAGAGTTAGAGATGGGTCCGATAGGGTTTGATCCTGAGACAGGGAGATCGAGGGGTTATGCCATTTTTATTTATAGAACGAATGAAGGTGCGAGGAAGGCTCTTGAGGAGCCACACAAAGTGTTCGAAGGGAACAAATTGCACTGCCAGAGGGCGTCTGAGGGGAAGAACAAGAATCAAAATTCGACGCAGGCAGGGAAGAGCTTGGGGCAAAGTCAGCCGTCGGTTATGGCGGCCATGGCCGCAGCTCCAAATTTGCATTTGTTCGCTCAACATCCGAGCCTTAATCCTATGTATGGTGGATATGGGAACCCAGCTTTGGGAGGTGGAATGTTGAACCAAGGAGTAGTTCCCATGAGTCAAGTGGGTCTGATTGGTAGTTCAGTTGGGGCTGGGATAGGTTTGAGTGGTTACAGTGGGGGGTCGTATGGCTTAAGCCAATTAAGTGCCGGTGGTTCGTCATTGCTAGGCTCTTATGGCCCTGGTTCGTCATCACTGAAGGGGTTGCCGCACATTTACTCAAGCTCAATGCTCGGTAAGACGGTTTCTGAATCGGGTCAGACGGCTGCTGGTGGATCTTACGGTGGATACACGTCACATTTGTGGTAA

Coding sequence (CDS)

ATGGAGGGAACCAATAAAACCACCAAAAGAAAGCTGGTGAAGAAATCTGAAAACAAGGTAGACAAGAAACCAAAGAAGGAGCTAGATGATCCCGTTCCGCCTCAACCACACGACGACGATGATTCCGACTCCGATTTGGACGATCTTTCCAAACTCCTCCAGCCTTTCTCCAAGACACAATTAATCGAGCTCATTTGCAGCACGGCTGTTAAAGACCCCAATCTTGAAGCCCAAATTCGAGCGGCTGCCGACCGCGATGTCACTAACCGCAAAATCTTTGTTCATGGCCTCAGTTGGGACACGACCCGAGAAACCCTAATGTTAGTTTTTGAATCTTTTGGTGAAATTGAAGATTGCAATGTGGTTATGGACAAAAATACAGGGAAGGCTAAGGGATATGGGTTTATTTTGTTTAAATCCCGGCAGGGTGCGACTAAGGCGTTGAAGGAACCTAGGAAGAGGATTAATAATCGGATGACTTCGTGTCAATTGGCTTCTTTGGGTTCGGTACCGCCCCCGCAAAGCCATGAGATTGGCTCGCGGAAGATTTATGTCGCTAATGTGCACCTTAACGTGGATGCTGAGAGGCTTAGGGCGTTCTTTGCGAAGTTTGGAGAGTTAGAGATGGGTCCGATAGGGTTTGATCCTGAGACAGGGAGATCGAGGGGTTATGCCATTTTTATTTATAGAACGAATGAAGGTGCGAGGAAGGCTCTTGAGGAGCCACACAAAGTGTTCGAAGGGAACAAATTGCACTGCCAGAGGGCGTCTGAGGGGAAGAACAAGAATCAAAATTCGACGCAGGCAGGGAAGAGCTTGGGGCAAAGTCAGCCGTCGGTTATGGCGGCCATGGCCGCAGCTCCAAATTTGCATTTGTTCGCTCAACATCCGAGCCTTAATCCTATGTATGGTGGATATGGGAACCCAGCTTTGGGAGGTGGAATGTTGAACCAAGGAGTAGTTCCCATGAGTCAAGTGGGTCTGATTGGTAGTTCAGTTGGGGCTGGGATAGGTTTGAGTGGTTACAGTGGGGGGTCGTATGGCTTAAGCCAATTAAGTGCCGGTGGTTCGTCATTGCTAGGCTCTTATGGCCCTGGTTCGTCATCACTGAAGGGGTTGCCGCACATTTACTCAAGCTCAATGCTCGGTAAGACGGTTTCTGAATCGGGTCAGACGGCTGCTGGTGGATCTTACGGTGGATACACGTCACATTTGTGGTAA

Protein sequence

MEGTNKTTKRKLVKKSENKVDKKPKKELDDPVPPQPHDDDDSDSDLDDLSKLLQPFSKTQLIELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLMLVFESFGEIEDCNVVMDKNTGKAKGYGFILFKSRQGATKALKEPRKRINNRMTSCQLASLGSVPPPQSHEIGSRKIYVANVHLNVDAERLRAFFAKFGELEMGPIGFDPETGRSRGYAIFIYRTNEGARKALEEPHKVFEGNKLHCQRASEGKNKNQNSTQAGKSLGQSQPSVMAAMAAAPNLHLFAQHPSLNPMYGGYGNPALGGGMLNQGVVPMSQVGLIGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLLGSYGPGSSSLKGLPHIYSSSMLGKTVSESGQTAAGGSYGGYTSHLW

Homology

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BLAST of Cp4.1LG14g01480 vs. Swiss-Prot
Match: UBA2B_ARATH (UBP1-associated protein 2B OS=Arabidopsis thaliana GN=UBA2B PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.3e-59
Identity = 160/414 (38.65%), Postives = 224/414 (54.11%), Query Frame = 1


Query: 11  KLVKKSENKVDKKPKKELDDPVPPQPHDDDDSDSDLDDLSKLLQPFSKTQLIELICSTAV 70
           K + + E K +   + E       Q ++DDD +  ++DL   L+PFSK QL+ L+   A 
Sbjct: 52  KEMHEEEAKGEDNIEAETSSGSGNQGNEDDDEEEPIEDL---LEPFSKDQLLILLKEAAE 111

Query: 71  KDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLMLVFESFGEIEDCNVVMDKNTGKA 130
           +  ++  +IR  AD D+ +RKIFVHGL WDT  ++L+  F+ +GEIEDC  V+DK +G++
Sbjct: 112 RHRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQS 171

Query: 131 KGYGFILFKSRQGATKALKEPRKRINNRMTSCQLASLGSVP-----PPQSH---EIGSRK 190
           KGYGFILFKSR GA  ALK+P+K+I  RMT+CQLAS+G V       P  H   E   RK
Sbjct: 172 KGYGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQGNPVVAPAQHFNPENVQRK 231

Query: 191 IYVANVHLNVDAERLRAFFAKFGELEMGPIGFDPETGRSRGYAIFIYRTNEGARKALEEP 250
           IYV+NV  ++D ++L  FF++FGE+E GP+G D  TGR +G+A+F+YR+ E A+KALEEP
Sbjct: 232 IYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESAKKALEEP 291

Query: 251 HKVFEGNKLHCQRASEG-----------KNKNQNST-QAGKSLGQSQPSVMAAMAAAPNL 310
           HK FEG+ LHC +A++G            + NQNS  Q   + G   P            
Sbjct: 292 HKTFEGHVLHCHKANDGPKQVKQHQHNHNSHNQNSRYQRNDNNGYGAP------------ 351

Query: 311 HLFAQHPSLNPMYGGYGNPALGGGMLNQGVVPMSQVGLIG--SSVGAGIGLSGYSGGSYG 370
                        GG+G+   G     Q   P     L    +S GAG+GL+        
Sbjct: 352 -------------GGHGHFIAGNNQAVQAFNPAIGQALTALLASQGAGLGLN-------- 411

Query: 371 LSQLSAGGSSLLGSYGPGS-SSLKGLPHIYSSSMLGKTVSESGQTAAGGSYGGY 402
                A G +LLG+ G  S  ++ G+P  Y +          G  A  G  GGY
Sbjct: 412 ----QAFGQALLGTLGTASPGAVGGMPSGYGTQANISPGVYPGYGAQAGYQGGY 425

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BLAST of Cp4.1LG14g01480 vs. Swiss-Prot
Match: UBA2A_ARATH (UBP1-associated protein 2A OS=Arabidopsis thaliana GN=UBA2A PE=1 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.1e-58
Identity = 160/395 (40.51%), Postives = 216/395 (54.68%), Query Frame = 1


Query: 37  HDDDDSDSDLDDLSKLLQPFSKTQLIELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHG 96
           + +DD D  + D   LL+PFSK Q++ L+   A K  ++  +IR  AD D  +RKIFVHG
Sbjct: 90  NQEDDDDEPIQD---LLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHG 149

Query: 97  LSWDTTRETLMLVFESFGEIEDCNVVMDKNTGKAKGYGFILFKSRQGATKALKEPRKRIN 156
           L WDT  ETL+  F+ +GEIEDC  V DK +GK+KGYGFIL+KSR GA  ALK+P+K+I 
Sbjct: 150 LGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIG 209

Query: 157 NRMTSCQLASLG-----------SVPPPQSH---EIGSRKIYVANVHLNVDAERLRAFFA 216
           +RMT+CQLAS G           +V  P  H   E   +KIYV+NV   +D ++L  FF+
Sbjct: 210 SRMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFS 269

Query: 217 KFGELEMGPIGFDPETGRSRGYAIFIYRTNEGARKALEEPHKVFEGNKLHCQRASEGKNK 276
           KFGE+E GP+G D  TGR +G+ +F+Y+++E A++ALEEPHK FEG+ LHCQ+A +G   
Sbjct: 270 KFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAIDGPKP 329

Query: 277 NQNSTQAGKSLGQSQPSVMAAMAAAPNLHLFAQHPSLNPMY-----GGYGNPALGGGMLN 336
                      G+ Q             H    H   NP Y      GYG P  G G L 
Sbjct: 330 -----------GKQQQ------------HHHNPHAYNNPRYQRNDNNGYGPPG-GHGHLM 389

Query: 337 QGVV-----PMSQVGLIGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLLGSYG------PG 396
            G       P +QV  I  ++G  +     S G+ GL+   A G +LLGS G      PG
Sbjct: 390 AGNPAGMGGPTAQV--INPAIGQALTALLASQGA-GLAFNPAIGQALLGSLGTAAGVNPG 449

Query: 397 SSSLKGLPHIYSSSMLGKTVSESGQTAAGGSYGGY 402
           +    G+P  Y +  +    +  G     G  GGY
Sbjct: 450 NG--VGMPTGYGTQAMAPG-TMPGYGTQPGLQGGY 451

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BLAST of Cp4.1LG14g01480 vs. Swiss-Prot
Match: UBA2C_ARATH (UBP1-associated protein 2C OS=Arabidopsis thaliana GN=UBA2C PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.2e-46
Identity = 134/364 (36.81%), Postives = 195/364 (53.57%), Query Frame = 1


Query: 48  DLSKLLQPFSKTQLIELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLM 107
           D  K+++ F+  QL++L+    V+ P++   +R  AD D++ RK+F+ GL+ DTT E L 
Sbjct: 33  DARKIIERFTTDQLLDLLQEAIVRHPDVLESVRLTADSDISQRKLFIRGLAADTTTEGLR 92

Query: 108 LVFESFGEIEDCNVVMDKNTGKAKGYGFILFKSRQGATKALKEPRKRINNRMTSCQLASL 167
            +F S+G++E+  V++DK TGK+KGYGF+ F    GA  ALKEP K+I+ R+T  QLA+ 
Sbjct: 93  SLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALKEPSKKIDGRVTVTQLAAS 152

Query: 168 GSV-PPPQSHEIGSRKIYVANVHLNVDAERLRAFFAKFGELEMGPIGFDPETGRSRGYAI 227
           G+     Q  +I  RKIYVANV  ++ A+RL   F  +G++E GP+GFD  TG+SRG+A+
Sbjct: 153 GNQGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFAL 212

Query: 228 FIYRTNEGARKALEEPHKVFEGNKLHCQRASEGKNKNQ----NSTQAGKSLGQSQPSVMA 287
           F+Y+T EGA+ AL +P KV +G  L+C+ A +GK   +     +   G   G      M 
Sbjct: 213 FVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKKGGKPGMPQAQDGGSGHGHVHGEGMG 272

Query: 288 AMAAAPNLHLFAQHPSLNPMYGGYGNPALGGGMLNQGVVPMSQVGLIGSSVGAGIGLSGY 347
            +  A               YG  G  +  GG    G  P   +    SS+  G+G +GY
Sbjct: 273 MVRPA-------------GPYGAAGGISAYGGY--SGGPPAHHMNSTHSSM--GVGSAGY 332

Query: 348 SG--GSYGLSQLSAGGSSLLGSY-----GPGSSSLKGLPHIYSSSMLGKTVSESGQTAAG 400
            G  G YG      GG+ + G       GPG+ S  G   +  SSM G      G     
Sbjct: 333 GGHYGGYG----GPGGTGVYGGLGGGYGGPGTGS--GQYRMPPSSMPG-----GGGYPES 368

[Close]

BLAST of Cp4.1LG14g01480 vs. Swiss-Prot
Match: UBA1A_ARATH (UBP1-associated proteins 1A OS=Arabidopsis thaliana GN=UBA1A PE=1 SV=2)

HSP 1 Score: 163.7 bits (413), Expect = 4.2e-39
Identity = 147/415 (35.42%), Postives = 203/415 (48.92%), Query Frame = 1


Query: 5   NKTTKRKLVKKSENKVDKKPK--KELDDPVPPQPHDDDDSDSDLDD-----------LSK 64
           +K+ KRKLVK      DKK K  K+   P    P+    S SD  D           L +
Sbjct: 6   DKSKKRKLVKSKSTNFDKKQKINKQQQQPESSTPYSSSSSSSDSSDSESDNEFDPEELRE 65

Query: 65  LLQPFSKTQLIELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLMLVFE 124
           LLQP+SK QL++L+CS +    ++ + +  AADRDVT+RKIFV+GL W+TTRETL+ VFE
Sbjct: 66  LLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFE 125

Query: 125 SFGEIEDCNVVMDKNTGKAKGYGFILFKSRQGATKALKEPRKRINNRMTSCQLASLGSVP 184
            +GEIE+C VV+DK TGKAKG+GF++FK+R+GA +ALKEP+KRI NR  +CQLAS+G   
Sbjct: 126 GYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLASMGPAA 185

Query: 185 PPQSH-EIGSRKIYVANVHLNVDAERLRAFFAKFGELEMGPIGFDPETGRSRGYAIFIYR 244
             + H + G  KI + ++             A  G+         P+  + +G  +F   
Sbjct: 186 SGKGHDQPGPVKISMGSM-------------ANHGQ---------PQQQQVQGQHVF--- 245

Query: 245 TNEGARKALEEPHKVFEGNKLHCQRASEGKNKNQNSTQAGKSLGQSQPSVMAAMAAAPNL 304
            N G   A   P  +  GN+ H                    LG   P++ AA AA    
Sbjct: 246 -NGGGMAA--SPFML--GNQYH-------------PLYGAGMLG--NPALAAAAAAG--- 305

Query: 305 HLFAQHPSLNPMYGGYGNPALGGGMLNQGVVPMSQVGLIGSSVGAGIGLSGYSGGSYGLS 364
                        GGY  P L G + + G+       ++ SS   GIG+           
Sbjct: 306 -------------GGYMYPMLAGALAHGGL----GSDMVQSSQMGGIGVD---------P 342

Query: 365 QLSAGGSSLLGSYGPGSSSLKGLPHIY-SSSMLGKTVSESGQTAAGGSYGGYTSH 405
            + A G S LGSY  G S    LP  Y  S   GK  +     A G S+ GY+++
Sbjct: 366 SVGAAGLSALGSYFRGQS----LPSTYPDSDAGGKRGTGKDSDAGGSSFHGYSNY 342

[Close]

BLAST of Cp4.1LG14g01480 vs. Swiss-Prot
Match: UBA1C_ARATH (UBP1-associated proteins 1C OS=Arabidopsis thaliana GN=UBA1C PE=3 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 3.5e-33
Identity = 78/164 (47.56%), Postives = 105/164 (64.02%), Query Frame = 1


Query: 3   GTNKTTKRKLVKKSENKVDKKPKKELDDPVPPQPHDDDDSDSDLDDLSKLLQPFSKTQLI 62
           G  K+  +K  K+ + K  KK KK        Q   D D + D +D+ +LL  +SK +L+
Sbjct: 329 GEQKSESKKAKKQDKEKKRKKDKK--------QTKSDSDFEHDKEDIKQLLVAYSKEELV 388

Query: 63  ELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLMLVFESFGEIEDCNVV 122
            LI  TA K   L + I  +ADRD+  R IFV G  WDTT+E L   FES+GEIE+C+VV
Sbjct: 389 NLIYKTAEKGSRLISAILESADRDIAQRNIFVRGFGWDTTQENLKTAFESYGEIEECSVV 448

Query: 123 MDKNTGKAKGYGFILFKSRQGATKALKEPRKRINNRMTSCQLAS 167
           MDK+TG+ KGYGF++FK+R+GA +ALK P KR+ NR+  C LAS
Sbjct: 449 MDKDTGRGKGYGFVMFKTRKGAREALKRPEKRMYNRIVVCNLAS 484

[Close]

BLAST of Cp4.1LG14g01480 vs. TrEMBL
Match: A0A0A0KXV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G031080 PE=4 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 2.9e-196
Identity = 363/407 (89.19%), Postives = 381/407 (93.61%), Query Frame = 1


Query: 1   MEGTNKTTKRKLVKKSENKVDKKPKKELDDPVPPQPHDDDDSDSDLDDLSKLLQPFSKTQ 60
           MEGTNKT KRKLVKKSENKVDKK KKEL+  V  QP DD  SDSD DDL KLL+PFSKTQ
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDV-SDSDFDDLPKLLEPFSKTQ 60

Query: 61  LIELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLMLVFESFGEIEDCN 120
           LIELIC+TA+KDPNL+AQIRAAADRDVT+RKIFVHGL WDTTRETL  VFESFGEIEDCN
Sbjct: 61  LIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCN 120

Query: 121 VVMDKNTGKAKGYGFILFKSRQGATKALKEPRKRINNRMTSCQLASLGSVPPPQSHEIGS 180
           VVMD+NTGKAKGYGFILFKSRQGA KALKEPRK+INNRMTSCQLAS+GSVPPPQS E+G 
Sbjct: 121 VVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGP 180

Query: 181 RKIYVANVHLNVDAERLRAFFAKFGELEMGPIGFDPETGRSRGYAIFIYRTNEGARKALE 240
           RKIYVANVH NVDAERLRAFFAKFG+LEMGPIGFDPETG+SRGYAIFIYRTNEGARKALE
Sbjct: 181 RKIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALE 240

Query: 241 EPHKVFEGNKLHCQRASEGKNKNQNSTQAGKSLGQSQPSVMAAMAAAPNLHLFAQHPSLN 300
           EPHKVFEGNKLHCQRASEGKNKNQNSTQA +SLGQ+Q  VMAAMAAAPNL LFAQHP LN
Sbjct: 241 EPHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLN 300

Query: 301 -PMYGGYGNPALGGGMLNQGVVPMSQVGLIGSSVGAGIGLSGYSGGSYGLSQLSAGGSSL 360
            P+YGGYG+PALGGGMLNQGVVPMSQVGL+GSSVGAGIGLSGYSGGSYGLSQLSAGGSSL
Sbjct: 301 HPVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSL 360

Query: 361 LGSYGPGSSSLKGLPHIYSSSMLGKTVSESGQTAAGGSYGGYTSHLW 407
           LGSYGPGSSSLKGLPHIYSS+MLGKTVSESGQ AAGGS GGYTSHLW
Sbjct: 361 LGSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHLW 406

[Close]

BLAST of Cp4.1LG14g01480 vs. TrEMBL
Match: F6H4P1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01290 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 8.4e-95
Identity = 211/398 (53.02%), Postives = 270/398 (67.84%), Query Frame = 1


Query: 1   MEGTNKTTKRKLVKKSENKVDKKPK-KELDDPVPPQPHDDD-DSDSDLDDLSKLLQPFSK 60
           M  T K+ K+KL KK+  K++KK K K+++  +  +P D D DSDS  D L KLL+P+SK
Sbjct: 1   MAKTKKSKKQKLTKKTPKKIEKKLKSKKVEKALATKPSDSDSDSDSGFDKLQKLLEPYSK 60

Query: 61  TQLIELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLMLVFESFGEIED 120
            QLI  I   A  D +L  +IR  ADRDV++RKIFVHGL WDTTRETL+  FE +G+IED
Sbjct: 61  DQLIGFISDAAASDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETLLAAFEPYGQIED 120

Query: 121 CNVVMDKNTGKAKGYGFILFKSRQGATKALKEPRKRINNRMTSCQLASLGSVPPPQSHEI 180
           CNVV D+NTGKAKGYGF+LFK+RQGA KALK+P K+INNRMT  QLAS+G  PPPQS + 
Sbjct: 121 CNVVTDRNTGKAKGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQLASMGPSPPPQSQDT 180

Query: 181 GSRKIYVANVHLNVDAERLRAFFAKFGELEMGPIGFDPETGRSRGYAIFIYRTNEGARKA 240
             RKIYV+NV  +VD ERLR+FFAKFGE+E GPIGFD +TG+SRG+A+F+Y+  E ARKA
Sbjct: 181 VGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRGFALFVYKNQESARKA 240

Query: 241 LEEPHKVFEGNKLHCQRASEGKNKNQNSTQAGKSLGQSQPSVMAAMAAAPNLHLFAQHPS 300
           LE+P+++FEG++LHCQ+A+EGKNK            Q QP  +AA+AA  N  + +QHP+
Sbjct: 241 LEDPYRIFEGHQLHCQKATEGKNKVP---------AQPQPQ-LAAVAATQNF-MLSQHPT 300

Query: 301 LNPMYGGY-------------GNPALGGGMLNQGVVPMSQVGLIGSSVGAGIGLSGYSGG 360
           LN +Y G               NPA+ G M N GV+  SQV   GS +G+  GL GY  G
Sbjct: 301 LNTLYSGLLAHPNASMIGAAAVNPAVAGAM-NPGVISSSQV---GSVIGSVEGLGGY--G 360

Query: 361 SYGLSQLSAGGSSLLGSYGPGSSSLKGLPHIYSSSMLG 384
           ++G++      S L    GP S    GL H Y S+ LG
Sbjct: 361 THGVAGFGGTPSVL----GPPS---LGLQHAYPSTQLG 374

[Close]

BLAST of Cp4.1LG14g01480 vs. TrEMBL
Match: A0A067KSI9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09364 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 2.9e-87
Identity = 200/419 (47.73%), Postives = 261/419 (62.29%), Query Frame = 1


Query: 5   NKTTKRKLVKKSENKVDKKPKKELDDPVPPQPHDDDDSDSDLD------------DLSKL 64
           N   K  L K+        P         P  +   DSDSD D            D+  L
Sbjct: 23  NPLQKPNLKKRKSETFASSPAAAATASSCPPKNTQTDSDSDSDSSSNSHFDSDPVDIPTL 82

Query: 65  LQPFSKTQLIELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLMLVFES 124
           L+P++K QLIELI   A  +P++   I   ADRD ++RKIFVHG +WDTTRE ++  FE 
Sbjct: 83  LEPYTKEQLIELISIAATNNPSIYPLINEHADRDASHRKIFVHGFTWDTTRENVLSAFEP 142

Query: 125 FGEIEDCNVVMDKNTGKAKGYGFILFKSRQGATKALKEPRKRINNRMTSCQLASLG-SVP 184
           FGEIE+CNVV DK TGKAKGYGF+LFK+R+GA  ALK+P+K INNR  SCQLAS+G +  
Sbjct: 143 FGEIEECNVVTDKVTGKAKGYGFVLFKTRKGAAMALKDPKKNINNRFASCQLASIGPAAN 202

Query: 185 PPQSHEIGSRKIYVANVHLNVDAERLRAFFAKFGELEMGPIGFDPETGRSRGYAIFIYRT 244
             +  E+G+RKIYV+NV +N D E+L+AF AKFGE+E GPIGFD ETGRSRGYA+F+Y+T
Sbjct: 203 VGKDQEVGARKIYVSNVQVNADKEKLKAFLAKFGEIESGPIGFDKETGRSRGYALFVYKT 262

Query: 245 NEGARKALEEPHKVFEGNKLHCQRASEGKNK-NQNSTQAGKSL-GQSQPSVMAAMAAAPN 304
            EGA++ALEEPHK+FEG +LHC  A+EGKNK NQ   Q  + +  QSQ  ++AA+AAA N
Sbjct: 263 VEGAKRALEEPHKMFEGQQLHCSIATEGKNKTNQVQMQQQQQVKQQSQDQMLAAVAAAQN 322

Query: 305 LHLFAQHPSLNPMYGG-YGNPALG--GGMLNQGVVPMSQVGLIGSSVGAGIGLSGYSGGS 364
           L LF Q P +NP+YGG   NPA     GM+N  +V      L+ +S   G+GL+      
Sbjct: 323 LALFGQQPGINPVYGGLLSNPAAAAPAGMINPLMVGAVSQSLVPTSQIGGLGLA------ 382

Query: 365 YGLSQLSAGGSSLLGSYGPGSSSLKGLPHIYSSSMLGKTVSESGQTAAGGSYGGYTSHL 406
                      S+LG+YG G    +GL H+YS++  G+     GQ   G S+ GY  ++
Sbjct: 383 ---------TQSVLGTYGAG----RGLQHVYSNTQTGQGGVGRGQ-GLGSSFAGYPPYM 421

[Close]

BLAST of Cp4.1LG14g01480 vs. TrEMBL
Match: M5VY35_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005550mg PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 5.0e-87
Identity = 216/478 (45.19%), Postives = 285/478 (59.62%), Query Frame = 1


Query: 1   MEGTNKTTKRKLVKKSENKVDKKPK-------------KELDDPVPPQPH---------- 60
           M    KT KR+L+K S+  ++KKPK             +E + P P Q            
Sbjct: 1   MAKITKTKKRRLIKTSDKTIEKKPKTQNPKQKFEEKEEREEEHPNPNQKQPQSDSDSGSV 60

Query: 61  ---DDDDSDSDLDDLSKLLQPFSKTQLIELICSTAVKDPNLEAQIRAAADRDVTNRKIFV 120
              D D S+SD+++L +LLQ ++K QLIELI   A KD  L  +IR AAD DV++RKIF+
Sbjct: 61  SDSDSDSSESDVENLPELLQAYTKDQLIELIVEAASKDSALFNRIRDAADGDVSHRKIFI 120

Query: 121 HGLSWDTTRETLMLVFESFGEIEDCNVVMDKNTGKAKGYGFILFKSRQGATKALKEPRKR 180
           HGL WDTTRETL+  FE FGEIE+CN+V+DK TGKAKGYGF+LFK+R+GA KALK P+K 
Sbjct: 121 HGLGWDTTRETLVAAFEPFGEIEECNLVLDKATGKAKGYGFVLFKTRRGAAKALKNPKKN 180

Query: 181 INNRMTSCQLASLG---------SVPPPQSHEIGSRKIYVANVHLNVDAERLRAFFAKFG 240
           I+NR+ SCQLAS+G         S       +  SRKIYV++V  +VD E+LR FFAKFG
Sbjct: 181 ISNRIASCQLASVGPANNNTTTSSSSFNAQSDSASRKIYVSSVPHDVDGEKLRIFFAKFG 240

Query: 241 ELEMGPIGFDPETGRSRGYAIFIYRTNEGARKALEEPHKVFEGNKLHCQRASEGKNKNQN 300
           E+E GP+GFD +TG+ +G+A+F+Y+T               EG++L CQ+A+EG +KN+N
Sbjct: 241 EIETGPMGFDSQTGKCKGFALFLYKT--------------VEGHQLQCQKAAEG-SKNKN 300

Query: 301 STQAGKSLGQSQPSVMAAMAAAPNLHLFAQHPSLNPMYGGYG------------------ 360
           S  A    GQ Q   +AA+AAA N+ LF QHP+LNP+YGG                    
Sbjct: 301 SAVAPPQ-GQMQQPTLAAVAAAQNMALFGQHPNLNPLYGGLMGNVGGGFVPGSANPGMVA 360

Query: 361 ---NPALGGGMLNQGVVPMSQVGLIGSSVGAGIGLSGYSGGSYGLSQLSAG--------- 406
              NP + GG LN  V+P+SQVG     VGAG+G  GYSGGS+GL  L  G         
Sbjct: 361 RALNPGIMGGALNPSVIPVSQVG----QVGAGVG--GYSGGSHGLVNLGGGSHGLVSLGG 420

[Close]

BLAST of Cp4.1LG14g01480 vs. TrEMBL
Match: B9H585_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s08340g PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.1e-86
Identity = 204/421 (48.46%), Postives = 264/421 (62.71%), Query Frame = 1


Query: 1   MEGTNKTTKRKLVKKSENKVDKKPKKELDDPV---PPQPHDDDDSDSDLDDLSKLLQPFS 60
           M  T KT K K  KK E    +KP K+    +    P P       SD  DLS LL+P++
Sbjct: 1   MAKTEKTKKLKTAKKPETTTKQKPLKKPKLKIRKTKPLP-------SDPADLSTLLEPYT 60

Query: 61  KTQLIELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLMLVFESFGEIE 120
           K QLI+LI ++A+K+P+L + I   ADRDVT+R +FVHG SWDTTR+ L+  F +FGEIE
Sbjct: 61  KDQLIDLITNSAIKNPSLYSLIHQHADRDVTHRNVFVHGFSWDTTRQDLVSAFAAFGEIE 120

Query: 121 DCNVVMDKNTGKAKGYGFILFKSRQGATKALKEPRKRINNRMTSCQLASLGSVPPPQSH- 180
           +CNVV+DK TGKAKGYGF+LFKSR+ A  ALKE ++ +N+RM SCQLAS+GS     +  
Sbjct: 121 ECNVVIDKATGKAKGYGFVLFKSRKAAISALKETKRMVNDRMASCQLASVGSANAASAAK 180

Query: 181 ----EIGSRKIYVANVHLNVDAERLRAFFAKFGELEMGPIGFDPETGRSRGYAIFIYRTN 240
               E G RKI+V+NV ++ D E+LRAFF KFGE+E GPIGFD ETG+SRGYA+F+Y+T 
Sbjct: 181 GKELEGGVRKIFVSNVGMSTDKEKLRAFFEKFGEIENGPIGFDKETGKSRGYALFVYKTV 240

Query: 241 EGARKALEEPHKVFEGNKLHCQRASEGKNK-NQNSTQAGKSLGQSQPSVMAA----MAAA 300
           EGA KALEEPHK+FEG +L C  A+EGKNK NQN  Q  + + Q QP         +AAA
Sbjct: 241 EGAIKALEEPHKIFEGQQLRCSVATEGKNKTNQNVAQGMQQVVQQQPVHQQPQGQFLAAA 300

Query: 301 PNLHLFAQHPSLNPMYGG-YGNPALGGGMLNQGVVPMSQVGLIGSSVGAGIGLSGYSGGS 360
            NL LF QHP  NP+Y    G+  +GGGM++  V+  S V    S VG            
Sbjct: 301 QNLALFGQHPGFNPLYSALLGSTGVGGGMISP-VIGQSMVPTATSQVGG----------- 360

Query: 361 YGLSQLSAGGSSLLGSYGPGSSSLKGLPHIYSS-SMLGKTVSESGQTAAGGSYGGYTSHL 407
                L  G  S L +Y     + + L H+YSS + +G+T    GQ  AGGS+ GY  ++
Sbjct: 361 -----LGVGSQSTLEAY----RAAQVLQHVYSSTTQIGQTGMGRGQ-GAGGSFTGYPKYM 392

[Close]

BLAST of Cp4.1LG14g01480 vs. TAIR10
Match: AT2G41060.1 (AT2G41060.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 231.9 bits (590), Expect = 7.1e-61
Identity = 160/414 (38.65%), Postives = 224/414 (54.11%), Query Frame = 1


Query: 11  KLVKKSENKVDKKPKKELDDPVPPQPHDDDDSDSDLDDLSKLLQPFSKTQLIELICSTAV 70
           K + + E K +   + E       Q ++DDD +  ++DL   L+PFSK QL+ L+   A 
Sbjct: 52  KEMHEEEAKGEDNIEAETSSGSGNQGNEDDDEEEPIEDL---LEPFSKDQLLILLKEAAE 111

Query: 71  KDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLMLVFESFGEIEDCNVVMDKNTGKA 130
           +  ++  +IR  AD D+ +RKIFVHGL WDT  ++L+  F+ +GEIEDC  V+DK +G++
Sbjct: 112 RHRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQS 171

Query: 131 KGYGFILFKSRQGATKALKEPRKRINNRMTSCQLASLGSVP-----PPQSH---EIGSRK 190
           KGYGFILFKSR GA  ALK+P+K+I  RMT+CQLAS+G V       P  H   E   RK
Sbjct: 172 KGYGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQGNPVVAPAQHFNPENVQRK 231

Query: 191 IYVANVHLNVDAERLRAFFAKFGELEMGPIGFDPETGRSRGYAIFIYRTNEGARKALEEP 250
           IYV+NV  ++D ++L  FF++FGE+E GP+G D  TGR +G+A+F+YR+ E A+KALEEP
Sbjct: 232 IYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESAKKALEEP 291

Query: 251 HKVFEGNKLHCQRASEG-----------KNKNQNST-QAGKSLGQSQPSVMAAMAAAPNL 310
           HK FEG+ LHC +A++G            + NQNS  Q   + G   P            
Sbjct: 292 HKTFEGHVLHCHKANDGPKQVKQHQHNHNSHNQNSRYQRNDNNGYGAP------------ 351

Query: 311 HLFAQHPSLNPMYGGYGNPALGGGMLNQGVVPMSQVGLIG--SSVGAGIGLSGYSGGSYG 370
                        GG+G+   G     Q   P     L    +S GAG+GL+        
Sbjct: 352 -------------GGHGHFIAGNNQAVQAFNPAIGQALTALLASQGAGLGLN-------- 411

Query: 371 LSQLSAGGSSLLGSYGPGS-SSLKGLPHIYSSSMLGKTVSESGQTAAGGSYGGY 402
                A G +LLG+ G  S  ++ G+P  Y +          G  A  G  GGY
Sbjct: 412 ----QAFGQALLGTLGTASPGAVGGMPSGYGTQANISPGVYPGYGAQAGYQGGY 425

[Close]

BLAST of Cp4.1LG14g01480 vs. TAIR10
Match: AT3G56860.3 (AT3G56860.3 UBP1-associated protein 2A)

HSP 1 Score: 228.8 bits (582), Expect = 6.0e-60
Identity = 160/395 (40.51%), Postives = 216/395 (54.68%), Query Frame = 1


Query: 37  HDDDDSDSDLDDLSKLLQPFSKTQLIELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHG 96
           + +DD D  + D   LL+PFSK Q++ L+   A K  ++  +IR  AD D  +RKIFVHG
Sbjct: 90  NQEDDDDEPIQD---LLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHG 149

Query: 97  LSWDTTRETLMLVFESFGEIEDCNVVMDKNTGKAKGYGFILFKSRQGATKALKEPRKRIN 156
           L WDT  ETL+  F+ +GEIEDC  V DK +GK+KGYGFIL+KSR GA  ALK+P+K+I 
Sbjct: 150 LGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIG 209

Query: 157 NRMTSCQLASLG-----------SVPPPQSH---EIGSRKIYVANVHLNVDAERLRAFFA 216
           +RMT+CQLAS G           +V  P  H   E   +KIYV+NV   +D ++L  FF+
Sbjct: 210 SRMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFS 269

Query: 217 KFGELEMGPIGFDPETGRSRGYAIFIYRTNEGARKALEEPHKVFEGNKLHCQRASEGKNK 276
           KFGE+E GP+G D  TGR +G+ +F+Y+++E A++ALEEPHK FEG+ LHCQ+A +G   
Sbjct: 270 KFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAIDGPKP 329

Query: 277 NQNSTQAGKSLGQSQPSVMAAMAAAPNLHLFAQHPSLNPMY-----GGYGNPALGGGMLN 336
                      G+ Q             H    H   NP Y      GYG P  G G L 
Sbjct: 330 -----------GKQQQ------------HHHNPHAYNNPRYQRNDNNGYGPPG-GHGHLM 389

Query: 337 QGVV-----PMSQVGLIGSSVGAGIGLSGYSGGSYGLSQLSAGGSSLLGSYG------PG 396
            G       P +QV  I  ++G  +     S G+ GL+   A G +LLGS G      PG
Sbjct: 390 AGNPAGMGGPTAQV--INPAIGQALTALLASQGA-GLAFNPAIGQALLGSLGTAAGVNPG 449

Query: 397 SSSLKGLPHIYSSSMLGKTVSESGQTAAGGSYGGY 402
           +    G+P  Y +  +    +  G     G  GGY
Sbjct: 450 NG--VGMPTGYGTQAMAPG-TMPGYGTQPGLQGGY 451

[Close]

BLAST of Cp4.1LG14g01480 vs. TAIR10
Match: AT3G15010.1 (AT3G15010.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 188.7 bits (478), Expect = 6.9e-48
Identity = 134/364 (36.81%), Postives = 195/364 (53.57%), Query Frame = 1


Query: 48  DLSKLLQPFSKTQLIELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLM 107
           D  K+++ F+  QL++L+    V+ P++   +R  AD D++ RK+F+ GL+ DTT E L 
Sbjct: 33  DARKIIERFTTDQLLDLLQEAIVRHPDVLESVRLTADSDISQRKLFIRGLAADTTTEGLR 92

Query: 108 LVFESFGEIEDCNVVMDKNTGKAKGYGFILFKSRQGATKALKEPRKRINNRMTSCQLASL 167
            +F S+G++E+  V++DK TGK+KGYGF+ F    GA  ALKEP K+I+ R+T  QLA+ 
Sbjct: 93  SLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALKEPSKKIDGRVTVTQLAAS 152

Query: 168 GSV-PPPQSHEIGSRKIYVANVHLNVDAERLRAFFAKFGELEMGPIGFDPETGRSRGYAI 227
           G+     Q  +I  RKIYVANV  ++ A+RL   F  +G++E GP+GFD  TG+SRG+A+
Sbjct: 153 GNQGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFAL 212

Query: 228 FIYRTNEGARKALEEPHKVFEGNKLHCQRASEGKNKNQ----NSTQAGKSLGQSQPSVMA 287
           F+Y+T EGA+ AL +P KV +G  L+C+ A +GK   +     +   G   G      M 
Sbjct: 213 FVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKKGGKPGMPQAQDGGSGHGHVHGEGMG 272

Query: 288 AMAAAPNLHLFAQHPSLNPMYGGYGNPALGGGMLNQGVVPMSQVGLIGSSVGAGIGLSGY 347
            +  A               YG  G  +  GG    G  P   +    SS+  G+G +GY
Sbjct: 273 MVRPA-------------GPYGAAGGISAYGGY--SGGPPAHHMNSTHSSM--GVGSAGY 332

Query: 348 SG--GSYGLSQLSAGGSSLLGSY-----GPGSSSLKGLPHIYSSSMLGKTVSESGQTAAG 400
            G  G YG      GG+ + G       GPG+ S  G   +  SSM G      G     
Sbjct: 333 GGHYGGYG----GPGGTGVYGGLGGGYGGPGTGS--GQYRMPPSSMPG-----GGGYPES 368

[Close]

BLAST of Cp4.1LG14g01480 vs. TAIR10
Match: AT2G22090.2 (AT2G22090.2 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 167.5 bits (423), Expect = 1.6e-41
Identity = 148/417 (35.49%), Postives = 204/417 (48.92%), Query Frame = 1


Query: 5   NKTTKRKLVKKSENKVDKKPK--KELDDPVPPQPHDDDDSDSDLDD-----------LSK 64
           +K+ KRKLVK      DKK K  K+   P    P+    S SD  D           L +
Sbjct: 6   DKSKKRKLVKSKSTNFDKKQKINKQQQQPESSTPYSSSSSSSDSSDSESDNEFDPEELRE 65

Query: 65  LLQPFSKTQLIELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLMLVFE 124
           LLQP+SK QL++L+CS +    ++ + +  AADRDVT+RKIFV+GL W+TTRETL+ VFE
Sbjct: 66  LLQPYSKDQLVDLVCSASRIGSSIYSAVVEAADRDVTHRKIFVYGLPWETTRETLVGVFE 125

Query: 125 SFGEIEDCNVVMDKNTGKAKGYGFILFKSRQGATKALKEPRKRINNRMTSCQLASLGSVP 184
            +GEIE+C VV+DK TGKAKG+GF++FK+R+GA +ALKEP+KRI NR  +CQLAS+G   
Sbjct: 126 GYGEIEECTVVIDKATGKAKGFGFVMFKTRKGAKEALKEPKKRILNRTATCQLASMGPAA 185

Query: 185 PPQSH-EIGSRKIYVANVHLNVDAERLRAFFAKFGELEMGPIGFDPETGRSRGYAIFIYR 244
             + H + G  KI + ++             A  G+         P+  + +G  +F   
Sbjct: 186 SGKGHDQPGPVKISMGSM-------------ANHGQ---------PQQQQVQGQHVF--- 245

Query: 245 TNEGARKALEEPHKVFEGNKLHCQRASEGKNKNQNSTQAGKSLGQSQPSVMAAMAAAPNL 304
            N G   A   P  +  GN+ H                    LG   P++ AA AA    
Sbjct: 246 -NGGGMAA--SPFML--GNQYH-------------PLYGAGMLG--NPALAAAAAAG--- 305

Query: 305 HLFAQHPSLNPMYGGYGNPALGGGMLNQGVVPMSQVGLIGSSVGAGIGLSGYSGGSYGLS 364
                        GGY  P L G + + G+       ++ SS   GIG+           
Sbjct: 306 -------------GGYMYPMLAGALAHGGL----GSDMVQSSQMGGIGVD---------P 344

Query: 365 QLSAGGSSLLGSYGPGSSSLKGLPHIY-SSSMLGKTVSESGQTAAGGSYGGYTSHLW 407
            + A G S LGSY  G S    LP  Y  S   GK  +     A G S+ GY+++ W
Sbjct: 366 SVGAAGLSALGSYFRGQS----LPSTYPDSDAGGKRGTGKDSDAGGSSFHGYSNYSW 344

[Close]

BLAST of Cp4.1LG14g01480 vs. TAIR10
Match: AT2G19380.1 (AT2G19380.1 RNA recognition motif (RRM)-containing protein)

HSP 1 Score: 144.1 bits (362), Expect = 2.0e-34
Identity = 78/164 (47.56%), Postives = 105/164 (64.02%), Query Frame = 1


Query: 3   GTNKTTKRKLVKKSENKVDKKPKKELDDPVPPQPHDDDDSDSDLDDLSKLLQPFSKTQLI 62
           G  K+  +K  K+ + K  KK KK        Q   D D + D +D+ +LL  +SK +L+
Sbjct: 329 GEQKSESKKAKKQDKEKKRKKDKK--------QTKSDSDFEHDKEDIKQLLVAYSKEELV 388

Query: 63  ELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLMLVFESFGEIEDCNVV 122
            LI  TA K   L + I  +ADRD+  R IFV G  WDTT+E L   FES+GEIE+C+VV
Sbjct: 389 NLIYKTAEKGSRLISAILESADRDIAQRNIFVRGFGWDTTQENLKTAFESYGEIEECSVV 448

Query: 123 MDKNTGKAKGYGFILFKSRQGATKALKEPRKRINNRMTSCQLAS 167
           MDK+TG+ KGYGF++FK+R+GA +ALK P KR+ NR+  C LAS
Sbjct: 449 MDKDTGRGKGYGFVMFKTRKGAREALKRPEKRMYNRIVVCNLAS 484

[Close]

BLAST of Cp4.1LG14g01480 vs. NCBI nr
Match: gi|778690495|ref|XP_011653131.1| (PREDICTED: UBP1-associated protein 2B-like isoform X1 [Cucumis sativus])

HSP 1 Score: 692.6 bits (1786), Expect = 4.2e-196
Identity = 363/407 (89.19%), Postives = 381/407 (93.61%), Query Frame = 1


Query: 1   MEGTNKTTKRKLVKKSENKVDKKPKKELDDPVPPQPHDDDDSDSDLDDLSKLLQPFSKTQ 60
           MEGTNKT KRKLVKKSENKVDKK KKEL+  V  QP DD  SDSD DDL KLL+PFSKTQ
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDV-SDSDFDDLPKLLEPFSKTQ 60

Query: 61  LIELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLMLVFESFGEIEDCN 120
           LIELIC+TA+KDPNL+AQIRAAADRDVT+RKIFVHGL WDTTRETL  VFESFGEIEDCN
Sbjct: 61  LIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCN 120

Query: 121 VVMDKNTGKAKGYGFILFKSRQGATKALKEPRKRINNRMTSCQLASLGSVPPPQSHEIGS 180
           VVMD+NTGKAKGYGFILFKSRQGA KALKEPRK+INNRMTSCQLAS+GSVPPPQS E+G 
Sbjct: 121 VVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGP 180

Query: 181 RKIYVANVHLNVDAERLRAFFAKFGELEMGPIGFDPETGRSRGYAIFIYRTNEGARKALE 240
           RKIYVANVH NVDAERLRAFFAKFG+LEMGPIGFDPETG+SRGYAIFIYRTNEGARKALE
Sbjct: 181 RKIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALE 240

Query: 241 EPHKVFEGNKLHCQRASEGKNKNQNSTQAGKSLGQSQPSVMAAMAAAPNLHLFAQHPSLN 300
           EPHKVFEGNKLHCQRASEGKNKNQNSTQA +SLGQ+Q  VMAAMAAAPNL LFAQHP LN
Sbjct: 241 EPHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLN 300

Query: 301 -PMYGGYGNPALGGGMLNQGVVPMSQVGLIGSSVGAGIGLSGYSGGSYGLSQLSAGGSSL 360
            P+YGGYG+PALGGGMLNQGVVPMSQVGL+GSSVGAGIGLSGYSGGSYGLSQLSAGGSSL
Sbjct: 301 HPVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSL 360

Query: 361 LGSYGPGSSSLKGLPHIYSSSMLGKTVSESGQTAAGGSYGGYTSHLW 407
           LGSYGPGSSSLKGLPHIYSS+MLGKTVSESGQ AAGGS GGYTSHLW
Sbjct: 361 LGSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHLW 406

[Close]

BLAST of Cp4.1LG14g01480 vs. NCBI nr
Match: gi|700198079|gb|KGN53237.1| (hypothetical protein Csa_4G031080 [Cucumis sativus])

HSP 1 Score: 692.6 bits (1786), Expect = 4.2e-196
Identity = 363/407 (89.19%), Postives = 381/407 (93.61%), Query Frame = 1


Query: 1   MEGTNKTTKRKLVKKSENKVDKKPKKELDDPVPPQPHDDDDSDSDLDDLSKLLQPFSKTQ 60
           MEGTNKT KRKLVKKSENKVDKK KKEL+  V  QP DD  SDSD DDL KLL+PFSKTQ
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDV-SDSDFDDLPKLLEPFSKTQ 60

Query: 61  LIELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLMLVFESFGEIEDCN 120
           LIELIC+TA+KDPNL+AQIRAAADRDVT+RKIFVHGL WDTTRETL  VFESFGEIEDCN
Sbjct: 61  LIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCN 120

Query: 121 VVMDKNTGKAKGYGFILFKSRQGATKALKEPRKRINNRMTSCQLASLGSVPPPQSHEIGS 180
           VVMD+NTGKAKGYGFILFKSRQGA KALKEPRK+INNRMTSCQLAS+GSVPPPQS E+G 
Sbjct: 121 VVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGP 180

Query: 181 RKIYVANVHLNVDAERLRAFFAKFGELEMGPIGFDPETGRSRGYAIFIYRTNEGARKALE 240
           RKIYVANVH NVDAERLRAFFAKFG+LEMGPIGFDPETG+SRGYAIFIYRTNEGARKALE
Sbjct: 181 RKIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALE 240

Query: 241 EPHKVFEGNKLHCQRASEGKNKNQNSTQAGKSLGQSQPSVMAAMAAAPNLHLFAQHPSLN 300
           EPHKVFEGNKLHCQRASEGKNKNQNSTQA +SLGQ+Q  VMAAMAAAPNL LFAQHP LN
Sbjct: 241 EPHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLN 300

Query: 301 -PMYGGYGNPALGGGMLNQGVVPMSQVGLIGSSVGAGIGLSGYSGGSYGLSQLSAGGSSL 360
            P+YGGYG+PALGGGMLNQGVVPMSQVGL+GSSVGAGIGLSGYSGGSYGLSQLSAGGSSL
Sbjct: 301 HPVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSL 360

Query: 361 LGSYGPGSSSLKGLPHIYSSSMLGKTVSESGQTAAGGSYGGYTSHLW 407
           LGSYGPGSSSLKGLPHIYSS+MLGKTVSESGQ AAGGS GGYTSHLW
Sbjct: 361 LGSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHLW 406

[Close]

BLAST of Cp4.1LG14g01480 vs. NCBI nr
Match: gi|778690498|ref|XP_011653132.1| (PREDICTED: UBP1-associated protein 2B-like isoform X2 [Cucumis sativus])

HSP 1 Score: 692.6 bits (1786), Expect = 4.2e-196
Identity = 363/407 (89.19%), Postives = 381/407 (93.61%), Query Frame = 1


Query: 1   MEGTNKTTKRKLVKKSENKVDKKPKKELDDPVPPQPHDDDDSDSDLDDLSKLLQPFSKTQ 60
           MEGTNKT KRKLVKKSENKVDKK KKEL+  V  QP DD  SDSD DDL KLL+PFSKTQ
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDV-SDSDFDDLPKLLEPFSKTQ 60

Query: 61  LIELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLMLVFESFGEIEDCN 120
           LIELIC+TA+KDPNL+AQIRAAADRDVT+RKIFVHGL WDTTRETL  VFESFGEIEDCN
Sbjct: 61  LIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCN 120

Query: 121 VVMDKNTGKAKGYGFILFKSRQGATKALKEPRKRINNRMTSCQLASLGSVPPPQSHEIGS 180
           VVMD+NTGKAKGYGFILFKSRQGA KALKEPRK+INNRMTSCQLAS+GSVPPPQS E+G 
Sbjct: 121 VVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGP 180

Query: 181 RKIYVANVHLNVDAERLRAFFAKFGELEMGPIGFDPETGRSRGYAIFIYRTNEGARKALE 240
           RKIYVANVH NVDAERLRAFFAKFG+LEMGPIGFDPETG+SRGYAIFIYRTNEGARKALE
Sbjct: 181 RKIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALE 240

Query: 241 EPHKVFEGNKLHCQRASEGKNKNQNSTQAGKSLGQSQPSVMAAMAAAPNLHLFAQHPSLN 300
           EPHKVFEGNKLHCQRASEGKNKNQNSTQA +SLGQ+Q  VMAAMAAAPNL LFAQHP LN
Sbjct: 241 EPHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLN 300

Query: 301 -PMYGGYGNPALGGGMLNQGVVPMSQVGLIGSSVGAGIGLSGYSGGSYGLSQLSAGGSSL 360
            P+YGGYG+PALGGGMLNQGVVPMSQVGL+GSSVGAGIGLSGYSGGSYGLSQLSAGGSSL
Sbjct: 301 HPVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSL 360

Query: 361 LGSYGPGSSSLKGLPHIYSSSMLGKTVSESGQTAAGGSYGGYTSHLW 407
           LGSYGPGSSSLKGLPHIYSS+MLGKTVSESGQ AAGGS GGYTSHLW
Sbjct: 361 LGSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHLW 406

[Close]

BLAST of Cp4.1LG14g01480 vs. NCBI nr
Match: gi|449462878|ref|XP_004149162.1| (PREDICTED: UBP1-associated protein 2B-like isoform X3 [Cucumis sativus])

HSP 1 Score: 688.3 bits (1775), Expect = 7.9e-195
Identity = 362/406 (89.16%), Postives = 380/406 (93.60%), Query Frame = 1


Query: 1   MEGTNKTTKRKLVKKSENKVDKKPKKELDDPVPPQPHDDDDSDSDLDDLSKLLQPFSKTQ 60
           MEGTNKT KRKLVKKSENKVDKK KKEL+  V  QP DD  SDSD DDL KLL+PFSKTQ
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEHNVQSQPVDDV-SDSDFDDLPKLLEPFSKTQ 60

Query: 61  LIELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLMLVFESFGEIEDCN 120
           LIELIC+TA+KDPNL+AQIRAAADRDVT+RKIFVHGL WDTTRETL  VFESFGEIEDCN
Sbjct: 61  LIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCN 120

Query: 121 VVMDKNTGKAKGYGFILFKSRQGATKALKEPRKRINNRMTSCQLASLGSVPPPQSHEIGS 180
           VVMD+NTGKAKGYGFILFKSRQGA KALKEPRK+INNRMTSCQLAS+GSVPPPQS E+G 
Sbjct: 121 VVMDRNTGKAKGYGFILFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGP 180

Query: 181 RKIYVANVHLNVDAERLRAFFAKFGELEMGPIGFDPETGRSRGYAIFIYRTNEGARKALE 240
           RKIYVANVH NVDAERLRAFFAKFG+LEMGPIGFDPETG+SRGYAIFIYRTNEGARKALE
Sbjct: 181 RKIYVANVHHNVDAERLRAFFAKFGDLEMGPIGFDPETGKSRGYAIFIYRTNEGARKALE 240

Query: 241 EPHKVFEGNKLHCQRASEGKNKNQNSTQAGKSLGQSQPSVMAAMAAAPNLHLFAQHPSLN 300
           EPHKVFEGNKLHCQRASEGKNKNQNSTQA +SLGQ+Q  VMAAMAAAPNL LFAQHP LN
Sbjct: 241 EPHKVFEGNKLHCQRASEGKNKNQNSTQAAESLGQNQTPVMAAMAAAPNLQLFAQHPGLN 300

Query: 301 -PMYGGYGNPALGGGMLNQGVVPMSQVGLIGSSVGAGIGLSGYSGGSYGLSQLSAGGSSL 360
            P+YGGYG+PALGGGMLNQGVVPMSQVGL+GSSVGAGIGLSGYSGGSYGLSQLSAGGSSL
Sbjct: 301 HPVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGGSYGLSQLSAGGSSL 360

Query: 361 LGSYGPGSSSLKGLPHIYSSSMLGKTVSESGQTAAGGSYGGYTSHL 406
           LGSYGPGSSSLKGLPHIYSS+MLGKTVSESGQ AAGGS GGYTSHL
Sbjct: 361 LGSYGPGSSSLKGLPHIYSSTMLGKTVSESGQAAAGGSLGGYTSHL 405

[Close]

BLAST of Cp4.1LG14g01480 vs. NCBI nr
Match: gi|659107614|ref|XP_008453765.1| (PREDICTED: UBP1-associated protein 2B-like [Cucumis melo])

HSP 1 Score: 593.2 bits (1528), Expect = 3.4e-166
Identity = 306/345 (88.70%), Postives = 323/345 (93.62%), Query Frame = 1


Query: 1   MEGTNKTTKRKLVKKSENKVDKKPKKELDDPVPPQPHDDDDSDSDLDDLSKLLQPFSKTQ 60
           MEGTNKT KRKLVKKSENKVDKK KKEL+D V  QP DD  SDSD DDL KLL+PFSKTQ
Sbjct: 1   MEGTNKTAKRKLVKKSENKVDKKLKKELEDNVQSQPLDDV-SDSDFDDLPKLLEPFSKTQ 60

Query: 61  LIELICSTAVKDPNLEAQIRAAADRDVTNRKIFVHGLSWDTTRETLMLVFESFGEIEDCN 120
           LIELIC+TA+KDPNL+AQIRAAADRDVT+RKIFVHGL WDTTRETL  VFESFGEIEDCN
Sbjct: 61  LIELICTTALKDPNLQAQIRAAADRDVTHRKIFVHGLGWDTTRETLTSVFESFGEIEDCN 120

Query: 121 VVMDKNTGKAKGYGFILFKSRQGATKALKEPRKRINNRMTSCQLASLGSVPPPQSHEIGS 180
           VVMD+NTGKAKGYGF+LFKSRQGA KALKEPRK+INNRMTSCQLAS+GSVPPPQS E+G 
Sbjct: 121 VVMDRNTGKAKGYGFVLFKSRQGAIKALKEPRKKINNRMTSCQLASVGSVPPPQSQEVGP 180

Query: 181 RKIYVANVHLNVDAERLRAFFAKFGELEMGPIGFDPETGRSRGYAIFIYRTNEGARKALE 240
           RKIYVANVH NVDAERLRAFFAKFGELEMGPIGFDPETG+SRGYAIFIYRTNEGARKALE
Sbjct: 181 RKIYVANVHHNVDAERLRAFFAKFGELEMGPIGFDPETGKSRGYAIFIYRTNEGARKALE 240

Query: 241 EPHKVFEGNKLHCQRASEGKNKNQNSTQAGKSLGQSQPSVMAAMAAAPNLHLFAQHPSLN 300
           EPHKVFEGNKLHCQRASEGKNKNQNSTQA +SLGQ+Q  VMAAMAAAPNL LFAQHP LN
Sbjct: 241 EPHKVFEGNKLHCQRASEGKNKNQNSTQAAQSLGQNQTPVMAAMAAAPNLQLFAQHPGLN 300

Query: 301 PMYGGYGNPALGGGMLNQGVVPMSQVGLIGSSVGAGIGLSGYSGG 346
           P+YGGYG+PALGGGMLNQGVVPMSQVGL+GSSVGAGIGLSGYSGG
Sbjct: 301 PVYGGYGSPALGGGMLNQGVVPMSQVGLVGSSVGAGIGLSGYSGG 344

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g01480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UBA2B_ARATH	1.3e-59	38.65	UBP1-associated protein 2B OS=Arabidopsis thaliana GN=UBA2B PE=2 SV=1	[more]
UBA2A_ARATH	1.1e-58	40.51	UBP1-associated protein 2A OS=Arabidopsis thaliana GN=UBA2A PE=1 SV=1	[more]
UBA2C_ARATH	1.2e-46	36.81	UBP1-associated protein 2C OS=Arabidopsis thaliana GN=UBA2C PE=2 SV=1	[more]
UBA1A_ARATH	4.2e-39	35.42	UBP1-associated proteins 1A OS=Arabidopsis thaliana GN=UBA1A PE=1 SV=2	[more]
UBA1C_ARATH	3.5e-33	47.56	UBP1-associated proteins 1C OS=Arabidopsis thaliana GN=UBA1C PE=3 SV=2	[more]

BLAST of Cp4.1LG14g01480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXV0_CUCSA	2.9e-196	89.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G031080 PE=4 SV=1	[more]
F6H4P1_VITVI	8.4e-95	53.02	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01290 PE=4 SV=...	[more]
A0A067KSI9_JATCU	2.9e-87	47.73	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09364 PE=4 SV=1	[more]
M5VY35_PRUPE	5.0e-87	45.19	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005550mg PE=4 SV=1	[more]
B9H585_POPTR	1.1e-86	48.46	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s08340g PE=4 SV=1	[more]

BLAST of Cp4.1LG14g01480 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41060.1	7.1e-61	38.65	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G56860.3	6.0e-60	40.51	UBP1-associated protein 2A	[more]
AT3G15010.1	6.9e-48	36.81	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G22090.2	1.6e-41	35.49	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G19380.1	2.0e-34	47.56	RNA recognition motif (RRM)-containing protein	[more]

BLAST of Cp4.1LG14g01480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778690495\|ref\|XP_011653131.1\|	4.2e-196	89.19	PREDICTED: UBP1-associated protein 2B-like isoform X1 [Cucumis sativus]	[more]
gi\|700198079\|gb\|KGN53237.1\|	4.2e-196	89.19	hypothetical protein Csa_4G031080 [Cucumis sativus]	[more]
gi\|778690498\|ref\|XP_011653132.1\|	4.2e-196	89.19	PREDICTED: UBP1-associated protein 2B-like isoform X2 [Cucumis sativus]	[more]
gi\|449462878\|ref\|XP_004149162.1\|	7.9e-195	89.16	PREDICTED: UBP1-associated protein 2B-like isoform X3 [Cucumis sativus]	[more]
gi\|659107614\|ref\|XP_008453765.1\|	3.4e-166	88.70	PREDICTED: UBP1-associated protein 2B-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g01480.1	Cp4.1LG14g01480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 183..252 score: 8.7E-10coord: 92..158 score: 9.1
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 182..254 score: 1.5E-14coord: 91..163 score: 7.6
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 90..185 score: 15.801coord: 181..258 score: 1
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 89..165 score: 5.6E-25coord: 175..263 score: 1.2E-16coord: 23..44 score: 5.6
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 71..171 score: 1.3E-23coord: 171..272 score: 5.57
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 63..263 score: 9.4E-85coord: 290..323 score: 9.4E-85coord: 395..406 score: 9.4
None	No IPR available	PANTHER	PTHR24012:SF397	OLIGOURIDYLATE-BINDING PROTEIN 1A-RELATED	coord: 290..323 score: 9.4E-85coord: 63..263 score: 9.4E-85coord: 395..406 score: 9.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG14g01480	Cucsa.029400	Cucumber (Gy14) v1	cgycpeB0000
Cp4.1LG14g01480	CmaCh16G006710	Cucurbita maxima (Rimu)	cmacpeB344
Cp4.1LG14g01480	CmoCh04G008510	Cucurbita moschata (Rifu)	cmocpeB667
Cp4.1LG14g01480	CmoCh16G007320	Cucurbita moschata (Rifu)	cmocpeB307
Cp4.1LG14g01480	Cla014500	Watermelon (97103) v1	cpewmB218
Cp4.1LG14g01480	Csa4G031080	Cucumber (Chinese Long) v2	cpecuB221
Cp4.1LG14g01480	MELO3C017573	Melon (DHL92) v3.5.1	cpemeB196
Cp4.1LG14g01480	ClCG07G009360	Watermelon (Charleston Gray)	cpewcgB210
Cp4.1LG14g01480	CSPI04G04810	Wild cucumber (PI 183967)	cpecpiB223
Cp4.1LG14g01480	Lsi07G001850	Bottle gourd (USVL1VR-Ls)	cpelsiB185
Cp4.1LG14g01480	MELO3C017573.2	Melon (DHL92) v3.6.1	cpemedB238
Cp4.1LG14g01480	CsaV3_UNG186420	Cucumber (Chinese Long) v3	cpecucB0279
Cp4.1LG14g01480	CsaV3_4G004880	Cucumber (Chinese Long) v3	cpecucB0266
Cp4.1LG14g01480	Bhi01G001914	Wax gourd	cpewgoB0289
Cp4.1LG14g01480	CsGy4G004720	Cucumber (Gy14) v2	cgybcpeB487
Cp4.1LG14g01480	Carg05786	Silver-seed gourd	carcpeB1414
Cp4.1LG14g01480	Carg14191	Silver-seed gourd	carcpeB1301

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG14g01480	Cp4.1LG01g09540	Cucurbita pepo (Zucchini)	cpecpeB233

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG14g01480	Watermelon (97103) v1	cpewmB232
Cp4.1LG14g01480	Cucurbita pepo (Zucchini)	cpecpeB065
Cp4.1LG14g01480	Cucurbita pepo (Zucchini)	cpecpeB239
Cp4.1LG14g01480	Cucurbita maxima (Rimu)	cmacpeB714